| Basic Information | |
|---|---|
| Family ID | F075104 |
| Family Type | Metagenome / Metatranscriptome |
| Number of Sequences | 119 |
| Average Sequence Length | 45 residues |
| Representative Sequence | MEPAPARPRHEAIDHDDLLVHEWRVTQLTRLGIPWSLAQA |
| Number of Associated Samples | 101 |
| Number of Associated Scaffolds | 119 |
| Quality Assessment | |
|---|---|
| Transcriptomic Evidence | Yes |
| Most common taxonomic group | Unclassified |
| % of genes with valid RBS motifs | 100.00 % |
| % of genes near scaffold ends (potentially truncated) | 0.84 % |
| % of genes from short scaffolds (< 2000 bps) | 0.84 % |
| Associated GOLD sequencing projects | 96 |
| AlphaFold2 3D model prediction | Yes |
| 3D model pTM-score | 0.51 |
| Hidden Markov Model |
|---|
| Powered by Skylign |
| Most Common Taxonomy | |
|---|---|
| Group | Unclassified (100.000 % of family members) |
| NCBI Taxonomy ID | N/A |
| Taxonomy | N/A |
| Most Common Ecosystem | |
|---|---|
| GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (38.655 % of family members) |
| Environment Ontology (ENVO) | Unclassified (39.496 % of family members) |
| Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Soil (non-saline) (52.941 % of family members) |
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| Predicted Topology & Secondary Structure | |||||
|---|---|---|---|---|---|
| Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 39.71% β-sheet: 0.00% Coil/Unstructured: 60.29% | Feature Viewer |
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| Powered by Feature Viewer | |||||
| Structure Viewer | |
|---|---|
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| Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.51 |
| Powered by PDBe Molstar | |
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| Pfam ID | Name | % Frequency in 119 Family Scaffolds |
|---|---|---|
| PF13191 | AAA_16 | 16.81 |
| PF13577 | SnoaL_4 | 6.72 |
| PF07730 | HisKA_3 | 5.88 |
| PF02566 | OsmC | 4.20 |
| PF03640 | Lipoprotein_15 | 3.36 |
| PF02426 | MIase | 2.52 |
| PF00196 | GerE | 2.52 |
| PF00106 | adh_short | 1.68 |
| PF13561 | adh_short_C2 | 1.68 |
| PF01381 | HTH_3 | 0.84 |
| PF13180 | PDZ_2 | 0.84 |
| PF02702 | KdpD | 0.84 |
| PF08388 | GIIM | 0.84 |
| PF14224 | DUF4331 | 0.84 |
| PF00107 | ADH_zinc_N | 0.84 |
| PF03779 | SPW | 0.84 |
| COG ID | Name | Functional Category | % Frequency in 119 Family Scaffolds |
|---|---|---|---|
| COG3850 | Signal transduction histidine kinase NarQ, nitrate/nitrite-specific | Signal transduction mechanisms [T] | 5.88 |
| COG3851 | Signal transduction histidine kinase UhpB, glucose-6-phosphate specific | Signal transduction mechanisms [T] | 5.88 |
| COG4564 | Signal transduction histidine kinase | Signal transduction mechanisms [T] | 5.88 |
| COG4585 | Signal transduction histidine kinase ComP | Signal transduction mechanisms [T] | 5.88 |
| COG1764 | Organic hydroperoxide reductase OsmC/OhrA | Defense mechanisms [V] | 4.20 |
| COG1765 | Uncharacterized OsmC-related protein | General function prediction only [R] | 4.20 |
| COG4315 | Predicted lipoprotein with conserved Yx(FWY)xxD motif (function unknown) | Function unknown [S] | 3.36 |
| COG4829 | Muconolactone delta-isomerase | Secondary metabolites biosynthesis, transport and catabolism [Q] | 2.52 |
| COG2205 | K+-sensing histidine kinase KdpD | Signal transduction mechanisms [T] | 0.84 |
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| Name | Rank | Taxonomy | Distribution |
| Unclassified | root | N/A | 100.00 % |
| Visualization |
|---|
| Powered by ApexCharts |
| Scaffold | Taxonomy | Length | IMG/M Link |
|---|---|---|---|
| 3300012200|Ga0137382_10929756 | Not Available | 626 | Open in IMG/M |
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| Habitat | Taxonomy | Distribution |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 38.66% |
| Tropical Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil | 8.40% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 8.40% |
| Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil | 8.40% |
| Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil | 7.56% |
| Hardwood Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil | 6.72% |
| Vadose Zone Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil | 4.20% |
| Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 3.36% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 1.68% |
| Peatlands Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil | 1.68% |
| Agricultural Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil | 1.68% |
| Tropical Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil | 1.68% |
| Boreal Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil | 1.68% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 0.84% |
| Surface Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil | 0.84% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 0.84% |
| Agricultural Soil | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil | 0.84% |
| Palsa | Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa | 0.84% |
| Tabebuia Heterophylla Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere | 0.84% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 0.84% |
| Visualization |
|---|
| Powered by ApexCharts |
| Taxon OID | Sample Name | Habitat Type | IMG/M Link |
|---|---|---|---|
| 3300002245 | Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027) | Environmental | Open in IMG/M |
| 3300005186 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 | Environmental | Open in IMG/M |
| 3300005332 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly) | Environmental | Open in IMG/M |
| 3300005435 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG | Environmental | Open in IMG/M |
| 3300005445 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG | Environmental | Open in IMG/M |
| 3300005468 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG | Environmental | Open in IMG/M |
| 3300005537 | Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 | Environmental | Open in IMG/M |
| 3300005591 | Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 | Environmental | Open in IMG/M |
| 3300005610 | Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 | Environmental | Open in IMG/M |
| 3300005764 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2) | Environmental | Open in IMG/M |
| 3300005921 | Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 | Environmental | Open in IMG/M |
| 3300005937 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 | Host-Associated | Open in IMG/M |
| 3300006176 | Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 | Environmental | Open in IMG/M |
| 3300006806 | Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 | Environmental | Open in IMG/M |
| 3300009038 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG | Environmental | Open in IMG/M |
| 3300009522 | Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG | Environmental | Open in IMG/M |
| 3300009792 | Tropical forest soil microbial communities from Panama - MetaG Plot_12 | Environmental | Open in IMG/M |
| 3300010048 | Tropical forest soil microbial communities from Panama - MetaG Plot_11 | Environmental | Open in IMG/M |
| 3300010358 | Tropical forest soil microbial communities from Panama - MetaG Plot_3 | Environmental | Open in IMG/M |
| 3300010376 | Tropical forest soil microbial communities from Panama - MetaG Plot_28 | Environmental | Open in IMG/M |
| 3300010398 | Tropical forest soil microbial communities from Panama - MetaG Plot_35 | Environmental | Open in IMG/M |
| 3300010876 | Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome) | Environmental | Open in IMG/M |
| 3300010880 | Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome) | Environmental | Open in IMG/M |
| 3300011106 | Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMC (Metagenome Metatranscriptome) (version 2) | Environmental | Open in IMG/M |
| 3300012200 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG | Environmental | Open in IMG/M |
| 3300012210 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG | Environmental | Open in IMG/M |
| 3300012971 | Tropical forest soil microbial communities from Panama - MetaG Plot_1 | Environmental | Open in IMG/M |
| 3300016294 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 | Environmental | Open in IMG/M |
| 3300016341 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 | Environmental | Open in IMG/M |
| 3300016371 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 | Environmental | Open in IMG/M |
| 3300016387 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 | Environmental | Open in IMG/M |
| 3300019887 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2 | Environmental | Open in IMG/M |
| 3300019890 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1 | Environmental | Open in IMG/M |
| 3300020140 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (Illumina Assembly) | Environmental | Open in IMG/M |
| 3300020579 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M | Environmental | Open in IMG/M |
| 3300020581 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M | Environmental | Open in IMG/M |
| 3300020582 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O | Environmental | Open in IMG/M |
| 3300021086 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly) | Environmental | Open in IMG/M |
| 3300021180 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O | Environmental | Open in IMG/M |
| 3300021181 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O | Environmental | Open in IMG/M |
| 3300021401 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O | Environmental | Open in IMG/M |
| 3300021405 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O | Environmental | Open in IMG/M |
| 3300021406 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O | Environmental | Open in IMG/M |
| 3300021407 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O | Environmental | Open in IMG/M |
| 3300021559 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M | Environmental | Open in IMG/M |
| 3300021560 | Tropical forest soil microbial communities from Panama - MetaG Plot_4 | Environmental | Open in IMG/M |
| 3300025910 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025915 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025927 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300027047 | Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF042 (SPAdes) | Environmental | Open in IMG/M |
| 3300027076 | Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF012 (SPAdes) | Environmental | Open in IMG/M |
| 3300027090 | Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF016 (SPAdes) | Environmental | Open in IMG/M |
| 3300027107 | Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF029 (SPAdes) | Environmental | Open in IMG/M |
| 3300027165 | Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF035 (SPAdes) | Environmental | Open in IMG/M |
| 3300027173 | Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF036 (SPAdes) | Environmental | Open in IMG/M |
| 3300027604 | Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300027787 | Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes) | Environmental | Open in IMG/M |
| 3300027853 | Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes) | Environmental | Open in IMG/M |
| 3300027884 | Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes) | Environmental | Open in IMG/M |
| 3300028047 | Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes) | Environmental | Open in IMG/M |
| 3300028906 | Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2) | Environmental | Open in IMG/M |
| 3300029636 | Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300030013 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_3 | Environmental | Open in IMG/M |
| 3300030730 | Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300031544 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26 | Environmental | Open in IMG/M |
| 3300031546 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23 | Environmental | Open in IMG/M |
| 3300031564 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21 | Environmental | Open in IMG/M |
| 3300031679 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23 | Environmental | Open in IMG/M |
| 3300031681 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20 | Environmental | Open in IMG/M |
| 3300031713 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22 | Environmental | Open in IMG/M |
| 3300031719 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2) | Environmental | Open in IMG/M |
| 3300031723 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23 | Environmental | Open in IMG/M |
| 3300031744 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2) | Environmental | Open in IMG/M |
| 3300031748 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22 | Environmental | Open in IMG/M |
| 3300031754 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515 | Environmental | Open in IMG/M |
| 3300031765 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22 | Environmental | Open in IMG/M |
| 3300031769 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24 | Environmental | Open in IMG/M |
| 3300031770 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17 | Environmental | Open in IMG/M |
| 3300031782 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20 | Environmental | Open in IMG/M |
| 3300031805 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23 | Environmental | Open in IMG/M |
| 3300031823 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05 | Environmental | Open in IMG/M |
| 3300031831 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20 | Environmental | Open in IMG/M |
| 3300031879 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2) | Environmental | Open in IMG/M |
| 3300031896 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19 | Environmental | Open in IMG/M |
| 3300031897 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16 | Environmental | Open in IMG/M |
| 3300031912 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2) | Environmental | Open in IMG/M |
| 3300031947 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H | Environmental | Open in IMG/M |
| 3300032008 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18 | Environmental | Open in IMG/M |
| 3300032039 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21 | Environmental | Open in IMG/M |
| 3300032043 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24 | Environmental | Open in IMG/M |
| 3300032055 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23 | Environmental | Open in IMG/M |
| 3300032064 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17 | Environmental | Open in IMG/M |
| 3300032065 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20 | Environmental | Open in IMG/M |
| 3300032067 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22 | Environmental | Open in IMG/M |
| 3300032068 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21 | Environmental | Open in IMG/M |
| 3300032076 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2) | Environmental | Open in IMG/M |
| 3300032090 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22 | Environmental | Open in IMG/M |
| 3300032180 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515 | Environmental | Open in IMG/M |
| 3300032205 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05 | Environmental | Open in IMG/M |
| 3300032261 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2) | Environmental | Open in IMG/M |
| 3300033290 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15 | Environmental | Open in IMG/M |
| Geographical Distribution | |
|---|---|
| Zoom: | Powered by OpenStreetMap |
| ⦗Top⦘ |
| Protein ID | Sample Taxon ID | Habitat | Sequence |
| JGIcombinedJ26739_1012617902 | 3300002245 | Forest Soil | MKPAPAPPSHEAINHDDQLVHEWRMTQLARLGIPWSLAQAVADGLADQR* |
| JGIcombinedJ26739_1013814972 | 3300002245 | Forest Soil | MEPAPARPRHEAIDHDDLLVHEWRVTQLARLGIPWSLAQAVADGLADQR* |
| Ga0066676_105245991 | 3300005186 | Soil | VEPAPTTPRHEAIDDDVLVHEWRVRQLAGLGIPWSLAQATADHV |
| Ga0066388_1072440762 | 3300005332 | Tropical Forest Soil | MTRPRHEAIDHDDLLVHEWRVTQLTRLGIPWALAQAAADHVDW |
| Ga0070714_1002890952 | 3300005435 | Agricultural Soil | MEPTRAILRHETIDDDEFLVHEWRVTQLARLGIPRPLAEAAADHVDWHQVAKL |
| Ga0070708_1005925242 | 3300005445 | Corn, Switchgrass And Miscanthus Rhizosphere | MEPTETITRHEAIEHDDLVVHEWRVTQLKRLGIPSPLAAAAADHVDWHEVAR |
| Ga0070707_1004829812 | 3300005468 | Corn, Switchgrass And Miscanthus Rhizosphere | MESQLARPDHEAIDHHDPVHEWRVRQLTRLGIPWSLAQTVADHVDWHQVAR |
| Ga0070730_108023851 | 3300005537 | Surface Soil | MEPAPARPRHEAIEHDDLAVHEWRVRQLTRLGIPGSLA |
| Ga0070761_110796211 | 3300005591 | Soil | MEPAPARPRHEAIDQNDLVVHEWRMTQLIRLGIPWSLAQAAA |
| Ga0070763_100295992 | 3300005610 | Soil | MKPAPARPRHEAIDHDDLLVHEWRVTQLARLGIPWSLAQAVADGLTDQR* |
| Ga0070763_107069312 | 3300005610 | Soil | MEPAPARPRHEAIDHNDLLVHEWRMTQLARLGIPWSLAQAVADGLAD |
| Ga0070763_109798492 | 3300005610 | Soil | MEATPTSQRYEAIDHDDLLVHEWRVKQLTRLGIPWSLAQAAADHVDWHQ |
| Ga0066903_1069801971 | 3300005764 | Tropical Forest Soil | MEPAPARQRHEAIDHDDRLVHGWRVARLTRPGIRWPLAQT |
| Ga0070766_101727162 | 3300005921 | Soil | MEPAPARPRHEAIDHNDLLVHEWRMTQLARLGIPWSLAQAVADGLADPR* |
| Ga0081455_108226462 | 3300005937 | Tabebuia Heterophylla Rhizosphere | MEPPLTRARHEVIEHDHLLVHEWRVTQLTRLGIPWLLAQTVADHVDWHQV |
| Ga0070765_1013971532 | 3300006176 | Soil | MEPAPIRPRHKAIDDDDPLVHEWRVRQLTRLGIPWSLAQAAADHVDWHQVA |
| Ga0070765_1020240592 | 3300006176 | Soil | MKPAPAPPSHEAINHDDPLVHEWRMTQLARLGIPWSLAQAVADGLADQR* |
| Ga0079220_101982412 | 3300006806 | Agricultural Soil | MEPAVARPRHEAIDHDDLLVHEWRVTQLTRLGIPWSLAHATADHVD* |
| Ga0099829_101185611 | 3300009038 | Vadose Zone Soil | MEPAPARPRHEAIDHDDLLVHEWRVTRLTRLGIPWSL |
| Ga0116218_13698201 | 3300009522 | Peatlands Soil | MEPAPATPRHEAIDDDDLLVHEWRVRQLTRLGIPW |
| Ga0126374_112107761 | 3300009792 | Tropical Forest Soil | MEPAPARPRHEAIDDDWVVHDWRVARLTGLGIPWPLAQAAADHVDWH |
| Ga0126373_106610421 | 3300010048 | Tropical Forest Soil | MEPTLAATRHEAIDDDHVLVHEWRVTQLKRLGIPGPLAHAAADHVDWHQVAK |
| Ga0126373_121485311 | 3300010048 | Tropical Forest Soil | MEPPLTRARHEVIDHDDFLVHECRVTQLTRLGIPWLLAQTAADHVDWHQVAKL |
| Ga0126373_129659981 | 3300010048 | Tropical Forest Soil | MEPAAAIARREAIDHDDRLAHRWRMARLTGLGVLRPPAQAAADHV |
| Ga0126370_117906543 | 3300010358 | Tropical Forest Soil | MEPALTRPRHEAIEHDYLIVHEWRVAQLTRLGIPWPLAQAAADHVDWHQVAKLVH |
| Ga0126370_126196782 | 3300010358 | Tropical Forest Soil | MEPALRRPRHEAIEHDYLIVHEWRVAQLTRLGIPWPLAQAAADHVDWHQVAKLVH |
| Ga0126381_1012446002 | 3300010376 | Tropical Forest Soil | MEAAATPQCHEAIDYDDRLVHRWRVARLTGLGVPWPLALA |
| Ga0126383_106614371 | 3300010398 | Tropical Forest Soil | MEPALTRPRHEAIEHDYLTVHEWRVAQLTRLGIPWPLAQAAADQVD |
| Ga0126361_102700222 | 3300010876 | Boreal Forest Soil | MEPAPARPRHEAIDHDDLIVHEWRVRQLTRLGIPWSLAQAAADHVDW |
| Ga0126350_117385762 | 3300010880 | Boreal Forest Soil | MEPTLAITRHEAIDDDDLLVHEWRVAQLKRLGIPGP |
| Ga0151489_14103152 | 3300011106 | Soil | MEPALARPRHEAIDHDDLLVHEWRVTQLTRLGIPWSLA* |
| Ga0137382_109297561 | 3300012200 | Vadose Zone Soil | MEPTLAIPRHEAIDDDELLVHEWRVTQLKRLGIPGPLADAAADHVDWHQVAKLVHR |
| Ga0137378_114626081 | 3300012210 | Vadose Zone Soil | MEPAPARPRHEAIDDDDLPVHEWRVTQLTRLGIPWSLAQAAADHVDWHQVAKL |
| Ga0126369_135530312 | 3300012971 | Tropical Forest Soil | MEPTLAATRHEAIDDDHVLVHEWRVTQLKRLGIPGPLAHAAADHVDWHQVA |
| Ga0182041_117247962 | 3300016294 | Soil | MEPAPARPRHEAIDHDDQLVHKWRLALLTALGTLWPLARAT |
| Ga0182035_121967911 | 3300016341 | Soil | MEPAPARPRHEAIDHDDQLVHKWRLALLTALGIPWPLAQAT |
| Ga0182034_104835811 | 3300016371 | Soil | MESGLTRPPHEPIDHGDLLVHEWRAAQLTRLGVPWGLAQAAA |
| Ga0182040_105422141 | 3300016387 | Soil | MEPAAATPRHEAIDHDDRLMHEWRVARLTGLGVPRPLAQAAAGHV |
| Ga0193729_10493233 | 3300019887 | Soil | MEPAPARPRHEAIDHDDLLGHEWRVTQLPWLGIPWSLAQAVADGLADQR |
| Ga0193728_13729201 | 3300019890 | Soil | MKPAPARPRHEAIDHDDLLVHECRVTQLTPLEIRGRWPRP |
| Ga0179590_10295411 | 3300020140 | Vadose Zone Soil | MEPAPARPRHEAIDHDDLLVHEWRVTQLARLGIPWSLAQAVADGLADQR |
| Ga0210407_105437532 | 3300020579 | Soil | MKPAPAPPSHEAINHDDPLVHEWRMTQLARLGIPWSLAQAVADGLADQR |
| Ga0210399_103198311 | 3300020581 | Soil | MEPAPTRPRHEAIDDDDLLVHEWRVRQLTRLGIAWSLSQAA |
| Ga0210399_104247092 | 3300020581 | Soil | MEPALARPRHEAIDDDDDLLVHEWRVRQLTRLGIP |
| Ga0210395_102670432 | 3300020582 | Soil | MEPAPARSRHEAIDHDDLLVHEWRVTQLIRLGIPWSLAQ |
| Ga0179596_103050252 | 3300021086 | Vadose Zone Soil | MEPTLAITRHEAIDDDDLLVHEWRVAQLKRLGIPGPLADAAADHVDWHQVAK |
| Ga0210396_102514763 | 3300021180 | Soil | MEPAPARPRHEAIDHDDLLVHEWRVTQLTRLGIPW |
| Ga0210388_107573392 | 3300021181 | Soil | MKESAPARPGHEAIDHGDLLVHEWRVTQLTRLGIPWSVA |
| Ga0210393_104502751 | 3300021401 | Soil | PARPRHKAIDHDDLLVHEWRVTQLARLGILWSLAQAVADGLADQR |
| Ga0210393_109767042 | 3300021401 | Soil | MEPAPARPRHEAIDQDDLVVHEWRVTQLTRLGIPWSLAQAAAGYVDWH |
| Ga0210387_111039591 | 3300021405 | Soil | TARPRHEAIDHDDLLVHEWRVTQLARLGIPWSLAQAVADGLADQR |
| Ga0210386_101102053 | 3300021406 | Soil | MEPAPARPRHKAIDHDDLLVHEWRVTQLARLGILWSLAQAVADGLADQR |
| Ga0210383_103302911 | 3300021407 | Soil | MEPPLRSARHEAIDRDDLVVHEWRVTRLTRLGIPWSLAQAA |
| Ga0210409_101564162 | 3300021559 | Soil | MDPAPARPRHEAIDHDDLVVHEWRVTQLARLGIPWSLAQAVADGLADQR |
| Ga0126371_130706262 | 3300021560 | Tropical Forest Soil | MESRLTRACHEVIDQDDLLVHEWRVTRLTRLGIPRLLAQAVA |
| Ga0207684_100558301 | 3300025910 | Corn, Switchgrass And Miscanthus Rhizosphere | MEPTPARPRHEAIDHDDLPAHEWRVTRLTWLGIPWPLAQAAAGHVD |
| Ga0207693_108162491 | 3300025915 | Corn, Switchgrass And Miscanthus Rhizosphere | MEPAPARPRDEAIDHDDLLVHEWPATQLTRLGIPWSLAQSAADHVDWHQV |
| Ga0207687_115008041 | 3300025927 | Miscanthus Rhizosphere | MEPALARPRHEAIDDDDLLVHEWRVRQLTRLGIPWSLAQAAADHV |
| Ga0208730_10187391 | 3300027047 | Forest Soil | MEPAPARPRHEAIDHNDLLVHEWRMTQLARLGIPWSLAQAVADGLADPR |
| Ga0208860_10273251 | 3300027076 | Forest Soil | MEPAPESPHHEAIDHDDLLVHEWRVTQLARLGIPWSLAQAVADGLADQR |
| Ga0208604_10179931 | 3300027090 | Forest Soil | MQPAPATPRHEAIDHDDLLVHEWRVTQLARLGIPWSLAQAVADGLADQR |
| Ga0208367_1007793 | 3300027107 | Forest Soil | MEPAPARPRHEAIDHDDLLVHEWRVTQLTRLGIPWSLAQA |
| Ga0208608_1022521 | 3300027165 | Forest Soil | MEPEPARPRHEAVDHDDLLVHEWRVTQLTLLGIPWSL |
| Ga0208097_10413621 | 3300027173 | Forest Soil | MEPAPESPHHEAIDHDDLLVHEWRVTQLAWLGIPWSLAQAVADGLADQR |
| Ga0208324_11709312 | 3300027604 | Peatlands Soil | MEPAPATPRHEAIDDDDLLVHEWRVRQLTRLGIPWS |
| Ga0209074_104334971 | 3300027787 | Agricultural Soil | MEPAVARPRHEAIDHDDLLVHEWRVTQLTRLGIPWSLAHATAD |
| Ga0209274_103478581 | 3300027853 | Soil | MEPAAARPRHEAIDHNDLLVHEWRVTQLARLGIPWSLAQAVADHV |
| Ga0209275_106219862 | 3300027884 | Soil | MEPEPARPRHEAVDHDDLLVHEWRVTQLTLLGIPW |
| Ga0209526_101539312 | 3300028047 | Forest Soil | MKPAPAPPSHEAINHDDQLVHEWRMTQLARLGIPWSLAQAVADGLADQR |
| Ga0308309_105795071 | 3300028906 | Soil | TMEPAPTIPRHEAIDHDDLLVHEWRVTQLTRPGLGTPDEC |
| Ga0222749_103394671 | 3300029636 | Soil | PARPRHEAIDHDDLVVHEWRVTQLARLGIPWSLAQAVADGLADQR |
| Ga0302178_102180841 | 3300030013 | Palsa | MEPEPARPRHEAVDHDDLLVHEWRVTQLTLLGIPWSLA |
| Ga0307482_12701511 | 3300030730 | Hardwood Forest Soil | MEPARARPRDEAIDHDDLLVHEWRVTQLARLGIPWSLAQAVADGLADQW |
| Ga0318534_101115633 | 3300031544 | Soil | MEPAAATPRHEAIDHDDRLVHEWRVARLSRLGVPWGLAQ |
| Ga0318538_104687801 | 3300031546 | Soil | MEPAAARPRHEAIDHDDRLVHRWRVARLTGLGIPWPLAQAAADHVDWHQVATLV |
| Ga0318573_102054242 | 3300031564 | Soil | MEPVPARPRREAIDRDDQLVREWRVARLTALGVPWLLARAAADHVDWH |
| Ga0318561_101892191 | 3300031679 | Soil | MESGLTRPPHEPIDHDDLLVHEWRAAQLTRLGVPWGLAQAAADYVDWHQVASLV |
| Ga0318572_101476933 | 3300031681 | Soil | MTRPRHEAIDHDDLLVHEWRVTQLTRLGVPWALAEGAADHVDWHQVAK |
| Ga0318496_105314891 | 3300031713 | Soil | MESGLTRPPHEPIDHDDLLVHEWRAAQLTRLGVPWGLAQA |
| Ga0306917_105904682 | 3300031719 | Soil | MESGLTRPPHEPIDHDDLLVHEWRAAQLTRLGVPWGLAQAAADYVDWHQV |
| Ga0318493_102264381 | 3300031723 | Soil | MESGLTRPPHEPIDHDDLLVHEWRAAQLTRLGVPWGLAQAAADYVDW |
| Ga0318493_108057492 | 3300031723 | Soil | MEPAPARRRREAIDHDDRLVREWRVARLIELGIPWPLAQTAADHVDWHHVATLVR |
| Ga0306918_105415891 | 3300031744 | Soil | MEPAAAIPRREAIDDDDRLVHRWRVARLTGLGVPWPLAQAAADHV |
| Ga0318492_107300391 | 3300031748 | Soil | MEPAPARPRHEAFDRDDRLVHKWRLALHTALGIPSPLAQV |
| Ga0307475_103589232 | 3300031754 | Hardwood Forest Soil | MEPAPARPRHEAIDHDDLLVHEWRVTQLARLGIPWSLAQ |
| Ga0307475_111126221 | 3300031754 | Hardwood Forest Soil | MEPTGTILHHEAIGDDEVLVHEWRVTQLTRLGIPGPLADAAADHVDWHQ |
| Ga0318554_103765961 | 3300031765 | Soil | MEPAAATPRHEAIDHDDRLMHEWRVARLTGLGVPRPLAQAA |
| Ga0318526_104712392 | 3300031769 | Soil | MEPAPAIPRHEAIDDDDRLVHRWRVARLTGLGVPWPLAQA |
| Ga0318521_109164061 | 3300031770 | Soil | MGPHHEAINHEDSLVHEWRVAQLTRLGIPGLLAETAADDVDWHQIARLV |
| Ga0318552_103305271 | 3300031782 | Soil | MTRPRHEAIDHDDLLVHEWRVTQLTRLGVPWALAEGAADHVDWH |
| Ga0318497_105077821 | 3300031805 | Soil | MEPAPAIPRHEAIDDDRLVHRWRVARLTGLGVPCPLAQAADD |
| Ga0307478_110014311 | 3300031823 | Hardwood Forest Soil | MEPAPARSRHEAIDHDDLLVHEWRVTQLIRLGIPWS |
| Ga0318564_103114562 | 3300031831 | Soil | MEPVPARPRREAIDRDDQLVREWRVARLTALGVPWLLARAAADHVDW |
| Ga0306919_113832272 | 3300031879 | Soil | MEPAAAIPRHEAIGHDDQLVHEWRVPRLTGLGIPGPLAQAAADHVD |
| Ga0318551_102387152 | 3300031896 | Soil | MEPAAATPRHEAIGHDDQLVHEWRVPRLTGLGIPGPLAQAAADHVDWHK |
| Ga0318520_106374681 | 3300031897 | Soil | MEPAAATPRHEAIDHDDRLMHEWRVARLTGLGVPRPLAQAAAGHVDWHQVAALVL |
| Ga0306921_124540342 | 3300031912 | Soil | MEPAAAIPRHEAIDDDDRLVHRWRVARLTGLGVPWP |
| Ga0310909_112162792 | 3300031947 | Soil | MEPVPARPRREAIDRDDQLVREWRVARLTALGVPWPLARAAADHVDWH |
| Ga0318562_106127741 | 3300032008 | Soil | MEPAPARPRHEAIDHDGRLAHKWRLAPHTALGIPSPLAQATAGRVDLLAVHAAR |
| Ga0318559_100783583 | 3300032039 | Soil | MEPAAATPRHEAIDHDDRLVHEWRVARLTRLGVPWGLAQAAAD |
| Ga0318559_105791851 | 3300032039 | Soil | MEPAPASPQLEAIDHDDRRLCEWRVARLSGLGIPWPLAQAAAD |
| Ga0318556_100909601 | 3300032043 | Soil | MTRPRHEAIDHDDLLVHEWRVTQLTRLGIPWALAQPLRATS |
| Ga0318575_103744951 | 3300032055 | Soil | MEPAAATPRHEAIDHDDRLVHEWRVARLSRLGVPWGLAQAAADHVDWHQVASLV |
| Ga0318575_104695312 | 3300032055 | Soil | MEPAPARPRHEAIDHDDQLVHKWRLALLTALGIPWPLAQATAGHVDWHQ |
| Ga0318575_105243361 | 3300032055 | Soil | MEPAPATPRHEAIDHDDRLVHEWRVARLTRLGVPWG |
| Ga0318510_103675331 | 3300032064 | Soil | MEPAPASPQLEAIDHDDRRVCEWRVARLSGLGIPWPLAQAAADHVDWH |
| Ga0318513_104980212 | 3300032065 | Soil | MEPVPARPRREAIDRDDQLVREWRVARLTALGVPWLLARA |
| Ga0318524_104208881 | 3300032067 | Soil | MEPAPATPRHEAIDHDDRLVHEWRVARLTRLGVPWGLAQAAADHVDWHQVA |
| Ga0318524_106782822 | 3300032067 | Soil | MEPAPARLRSEAIDHDDRLVREWRVARLTELGIPWPLAQT |
| Ga0318553_101348281 | 3300032068 | Soil | MESGLTRPPHEPIDHDDLLVHEWRAAQLTRLGVPWG |
| Ga0318553_107447721 | 3300032068 | Soil | MEPAPARPRHEAIDHDDRLVHEWRVARLTELGIPGPLAQAAVGH |
| Ga0306924_125703101 | 3300032076 | Soil | VLEPVPARPRREAIDRDDQLVREWRVARLTALGVPWLLARAAA |
| Ga0318518_102018331 | 3300032090 | Soil | MEPAPASPQLEAIDHDDRRVCEWRVARLSGLGIPWPLA |
| Ga0307471_1019346881 | 3300032180 | Hardwood Forest Soil | MEPTLAIPHHEAIDDDELLVHEWRVTQLKRLGIPGPLADAAADHVDWHQV |
| Ga0307471_1032665651 | 3300032180 | Hardwood Forest Soil | MEPAPARPRHEAIDHDDLLVHEWRVTRLARLGIPWSLAQAVADGLADQR |
| Ga0307472_1013928761 | 3300032205 | Hardwood Forest Soil | MEPTLAIPRHEAIDDDELLVHEWRVTQLKRLGIPGPLADAAADH |
| Ga0307472_1020746871 | 3300032205 | Hardwood Forest Soil | MEPAPARPRHEAIDHDDLLVHEWRVTRLARLGIPWSLAQAVADGL |
| Ga0306920_1016401681 | 3300032261 | Soil | MEPAPARLRSEAIDHDDRLVREWRVARLTELGIPWPLAQTAA |
| Ga0318519_105778421 | 3300033290 | Soil | MEPAPAIPRHEAIDDDDRLVRRWRVARLTGLGVPW |
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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |