Metagenome / Metatranscriptome Family F075099

Basic Information
Family ID	F075099
Family Type	Metagenome / Metatranscriptome
Number of Sequences	119
Average Sequence Length	38 residues
Representative Sequence	LQIMMVPADGKFFFANDVLRSMNAANHASQAEEPEDQQPK
Number of Associated Samples	110
Number of Associated Scaffolds	119

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.84 %
% of genes near scaffold ends (potentially truncated)	95.80 %
% of genes from short scaffolds (< 2000 bps)	84.03 %
Associated GOLD sequencing projects	108
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.26

Most Common Taxonomy
Group	Bacteria (86.555 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (9.244 % of family members)
Environment Ontology (ENVO)	Unclassified (15.966 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (53.782 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 26.47% β-sheet: 0.00% Coil/Unstructured: 73.53%
Feature Viewer

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Pfam ID	Name	% Frequency in 119 Family Scaffolds
PF00496	SBP_bac_5	12.61
PF01145	Band_7	1.68
PF02012	BNR	0.84
PF00848	Ring_hydroxyl_A	0.84
PF02129	Peptidase_S15	0.84
PF00440	TetR_N	0.84
PF00128	Alpha-amylase	0.84
PF02518	HATPase_c	0.84

COG ID	Name	Functional Category	% Frequency in 119 Family Scaffolds
COG4638	Phenylpropionate dioxygenase or related ring-hydroxylating dioxygenase, large terminal subunit	Inorganic ion transport and metabolism [P]	1.68
COG0296	1,4-alpha-glucan branching enzyme	Carbohydrate transport and metabolism [G]	0.84
COG0366	Glycosidase/amylase (phosphorylase)	Carbohydrate transport and metabolism [G]	0.84
COG1523	Pullulanase/glycogen debranching enzyme	Carbohydrate transport and metabolism [G]	0.84
COG3280	Maltooligosyltrehalose synthase	Carbohydrate transport and metabolism [G]	0.84

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	86.55 %
Unclassified	root	N/A	13.45 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	86.55 %
Unclassified	root	N/A	13.45 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	86.55 %
Unclassified	root	N/A	13.45 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	67.23 %
Unclassified	root	N/A	13.45 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	34.45 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	29.41 %
Unclassified	root	N/A	13.45 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	34.45 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	28.57 %
Unclassified	root	N/A	13.45 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	34.45 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	28.57 %
Unclassified	root	N/A	13.45 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	34.45 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	27.73 %
Unclassified	root	N/A	13.45 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	34.45 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	14.29 %
Unclassified	root	N/A	13.45 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000789\|JGI1027J11758_12374013	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	784	Open in IMG/M
3300001154\|JGI12636J13339_1000360	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	7573	Open in IMG/M
3300001356\|JGI12269J14319_10023300	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	4335	Open in IMG/M
3300001471\|JGI12712J15308_10202188	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	522	Open in IMG/M
3300001686\|C688J18823_10011538	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	5806	Open in IMG/M
3300002562\|JGI25382J37095_10016572	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2825	Open in IMG/M
3300005166\|Ga0066674_10445205	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	592	Open in IMG/M
3300005175\|Ga0066673_10415573	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	787	Open in IMG/M
3300005330\|Ga0070690_101355439	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	571	Open in IMG/M
3300005434\|Ga0070709_11652149	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	522	Open in IMG/M
3300005435\|Ga0070714_101942715	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	574	Open in IMG/M
3300005436\|Ga0070713_100996379	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	808	Open in IMG/M
3300005537\|Ga0070730_10816536	Not Available	587	Open in IMG/M
3300005541\|Ga0070733_11111310	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	530	Open in IMG/M
3300005542\|Ga0070732_10156251	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1358	Open in IMG/M
3300005542\|Ga0070732_10242978	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1078	Open in IMG/M
3300005542\|Ga0070732_10335632	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	909	Open in IMG/M
3300005554\|Ga0066661_10753340	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	570	Open in IMG/M
3300005559\|Ga0066700_11062654	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	530	Open in IMG/M
3300005563\|Ga0068855_100958315	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	901	Open in IMG/M
3300005566\|Ga0066693_10123950	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	952	Open in IMG/M
3300005574\|Ga0066694_10488690	Not Available	574	Open in IMG/M
3300005591\|Ga0070761_10303872	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	961	Open in IMG/M
3300005712\|Ga0070764_10092631	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1605	Open in IMG/M
3300005712\|Ga0070764_10891028	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	557	Open in IMG/M
3300005841\|Ga0068863_100172336	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	2076	Open in IMG/M
3300005993\|Ga0080027_10220575	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	743	Open in IMG/M
3300006032\|Ga0066696_10515566	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	784	Open in IMG/M
3300006050\|Ga0075028_100628239	All Organisms → cellular organisms → Bacteria	640	Open in IMG/M
3300006059\|Ga0075017_100108327	All Organisms → cellular organisms → Bacteria → Acidobacteria	1942	Open in IMG/M
3300006102\|Ga0075015_100793573	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	568	Open in IMG/M
3300006162\|Ga0075030_101638986	Not Available	503	Open in IMG/M
3300006176\|Ga0070765_101757215	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	582	Open in IMG/M
3300006176\|Ga0070765_101928686	All Organisms → cellular organisms → Bacteria	553	Open in IMG/M
3300009012\|Ga0066710_104706551	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	510	Open in IMG/M
3300009518\|Ga0116128_1133794	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	715	Open in IMG/M
3300009520\|Ga0116214_1439491	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	510	Open in IMG/M
3300009623\|Ga0116133_1142140	Not Available	626	Open in IMG/M
3300009839\|Ga0116223_10236184	All Organisms → cellular organisms → Bacteria	1107	Open in IMG/M
3300010358\|Ga0126370_12215688	Not Available	542	Open in IMG/M
3300010362\|Ga0126377_10323700	All Organisms → cellular organisms → Bacteria	1529	Open in IMG/M
3300010396\|Ga0134126_11909843	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	650	Open in IMG/M
3300011271\|Ga0137393_11424230	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	582	Open in IMG/M
3300012200\|Ga0137382_11266263	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	522	Open in IMG/M
3300012208\|Ga0137376_11571521	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	549	Open in IMG/M
3300012211\|Ga0137377_10609927	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1028	Open in IMG/M
3300012349\|Ga0137387_10575257	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	817	Open in IMG/M
3300012362\|Ga0137361_10568790	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1039	Open in IMG/M
3300012685\|Ga0137397_10779728	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	709	Open in IMG/M
3300012925\|Ga0137419_10004203	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	7018	Open in IMG/M
3300012986\|Ga0164304_11462080	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	564	Open in IMG/M
3300012989\|Ga0164305_10753003	Not Available	802	Open in IMG/M
3300013306\|Ga0163162_11489274	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	771	Open in IMG/M
3300014154\|Ga0134075_10331198	All Organisms → cellular organisms → Bacteria	666	Open in IMG/M
3300014156\|Ga0181518_10538280	Not Available	549	Open in IMG/M
3300014167\|Ga0181528_10650212	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	587	Open in IMG/M
3300015372\|Ga0132256_102943052	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	573	Open in IMG/M
3300017933\|Ga0187801_10116815	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1022	Open in IMG/M
3300017936\|Ga0187821_10127837	All Organisms → cellular organisms → Bacteria	950	Open in IMG/M
3300017947\|Ga0187785_10018636	All Organisms → cellular organisms → Bacteria	2438	Open in IMG/M
3300017973\|Ga0187780_10556526	All Organisms → cellular organisms → Bacteria	822	Open in IMG/M
3300017975\|Ga0187782_10106701	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2063	Open in IMG/M
3300017975\|Ga0187782_10618075	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	833	Open in IMG/M
3300017994\|Ga0187822_10081560	All Organisms → cellular organisms → Bacteria	960	Open in IMG/M
3300018012\|Ga0187810_10483255	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	528	Open in IMG/M
3300018013\|Ga0187873_1330962	Not Available	557	Open in IMG/M
3300018038\|Ga0187855_10464958	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	737	Open in IMG/M
3300018043\|Ga0187887_10130768	All Organisms → cellular organisms → Bacteria	1507	Open in IMG/M
3300018062\|Ga0187784_11146632	Not Available	617	Open in IMG/M
3300018088\|Ga0187771_11367874	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	600	Open in IMG/M
3300018482\|Ga0066669_10021056	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3649	Open in IMG/M
3300018482\|Ga0066669_11332425	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	650	Open in IMG/M
3300020018\|Ga0193721_1016363	All Organisms → cellular organisms → Bacteria	1951	Open in IMG/M
3300020150\|Ga0187768_1114766	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	617	Open in IMG/M
3300021171\|Ga0210405_10337161	All Organisms → cellular organisms → Bacteria	1190	Open in IMG/M
3300021181\|Ga0210388_11539317	Not Available	554	Open in IMG/M
3300021406\|Ga0210386_10030503	All Organisms → cellular organisms → Bacteria → Acidobacteria	4229	Open in IMG/M
3300021406\|Ga0210386_10672605	All Organisms → cellular organisms → Bacteria	893	Open in IMG/M
3300021406\|Ga0210386_10846913	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	784	Open in IMG/M
3300021407\|Ga0210383_10344976	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1283	Open in IMG/M
3300021432\|Ga0210384_10018945	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	6682	Open in IMG/M
3300021477\|Ga0210398_10007494	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	9901	Open in IMG/M
3300021560\|Ga0126371_10227764	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1971	Open in IMG/M
3300025906\|Ga0207699_11243222	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	551	Open in IMG/M
3300025921\|Ga0207652_10193181	All Organisms → cellular organisms → Bacteria	1831	Open in IMG/M
3300026215\|Ga0209849_1052349	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	714	Open in IMG/M
3300026301\|Ga0209238_1274587	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	506	Open in IMG/M
3300026329\|Ga0209375_1031856	All Organisms → cellular organisms → Bacteria → Acidobacteria	2831	Open in IMG/M
3300026524\|Ga0209690_1224968	Not Available	590	Open in IMG/M
3300026532\|Ga0209160_1039084	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2882	Open in IMG/M
3300026552\|Ga0209577_10678626	All Organisms → cellular organisms → Bacteria	587	Open in IMG/M
3300027570\|Ga0208043_1013963	All Organisms → cellular organisms → Bacteria	2638	Open in IMG/M
3300027853\|Ga0209274_10626235	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	556	Open in IMG/M
3300027894\|Ga0209068_10462862	Not Available	728	Open in IMG/M
3300028866\|Ga0302278_10151213	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1210	Open in IMG/M
3300029989\|Ga0311365_10075409	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2875	Open in IMG/M
3300029999\|Ga0311339_10594700	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1103	Open in IMG/M
3300030003\|Ga0302172_10151955	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	719	Open in IMG/M
3300030007\|Ga0311338_11966328	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	520	Open in IMG/M
3300030019\|Ga0311348_10857262	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	676	Open in IMG/M
3300030399\|Ga0311353_10011920	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	10199	Open in IMG/M
3300030491\|Ga0302211_10051677	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1173	Open in IMG/M
3300030503\|Ga0311370_10654913	All Organisms → cellular organisms → Bacteria	1244	Open in IMG/M
3300030862\|Ga0265753_1104217	Not Available	578	Open in IMG/M
3300031057\|Ga0170834_100050311	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	798	Open in IMG/M
3300031232\|Ga0302323_100278529	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1725	Open in IMG/M
3300031681\|Ga0318572_10449658	All Organisms → cellular organisms → Bacteria	767	Open in IMG/M
3300031715\|Ga0307476_10481209	All Organisms → cellular organisms → Bacteria	919	Open in IMG/M
3300031726\|Ga0302321_100872473	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1018	Open in IMG/M
3300031754\|Ga0307475_11424419	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	533	Open in IMG/M
3300031823\|Ga0307478_11144978	Not Available	649	Open in IMG/M
3300031910\|Ga0306923_10376717	All Organisms → cellular organisms → Bacteria	1617	Open in IMG/M
3300031996\|Ga0308176_10850044	All Organisms → cellular organisms → Bacteria	956	Open in IMG/M
3300032805\|Ga0335078_12534046	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	528	Open in IMG/M
3300032828\|Ga0335080_10223029	All Organisms → cellular organisms → Bacteria	2067	Open in IMG/M
3300032828\|Ga0335080_11852144	Not Available	588	Open in IMG/M
3300032892\|Ga0335081_10318170	All Organisms → cellular organisms → Bacteria → Acidobacteria	2049	Open in IMG/M
3300032955\|Ga0335076_10810206	All Organisms → cellular organisms → Bacteria	818	Open in IMG/M
3300033134\|Ga0335073_11780125	Not Available	577	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.64%
Host-Associated	Host-Associated	3.36%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	83.19%
Aquatic	Environmental → Aquatic	13.45%
Plants	Host-Associated → Plants	3.36%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	73.95%
Freshwater	Environmental → Aquatic → Freshwater	9.24%
Peat	Environmental → Terrestrial → Peat	9.24%
Sediment	Environmental → Aquatic → Sediment	4.20%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.52%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.84%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	47.90%
Loam	Environmental → Terrestrial → Soil → Loam	13.45%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	12.61%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	9.24%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	9.24%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.20%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.52%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.84%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.85%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	13.45%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	11.76%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	10.92%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	9.24%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.72%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.04%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	4.20%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.20%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	3.36%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.52%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.68%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.68%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.68%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.84%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.84%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	9.24%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.56%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.72%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	5.88%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	5.04%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	5.04%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	5.04%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	4.20%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	4.20%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.20%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	3.36%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.36%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	3.36%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	3.36%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	2.52%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.52%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.52%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.52%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.68%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.68%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.68%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.68%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.84%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.84%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.84%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.84%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.84%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.84%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.84%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.84%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	0.84%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.84%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.84%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.84%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.84%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001154	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1	Environmental	Open in IMG/M
3300001356	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007	Environmental	Open in IMG/M
3300001471	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300002562	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005566	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005993	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009518	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_150	Environmental	Open in IMG/M
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental	Open in IMG/M
3300009623	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300014156	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_60_metaG	Environmental	Open in IMG/M
3300014167	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_10_metaG	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017936	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1	Environmental	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300017994	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2	Environmental	Open in IMG/M
3300018012	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_5	Environmental	Open in IMG/M
3300018013	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_100	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020018	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s2	Environmental	Open in IMG/M
3300020150	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_20_MG	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300026215	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-048 (SPAdes)	Environmental	Open in IMG/M
3300026301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)	Environmental	Open in IMG/M
3300026524	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)	Environmental	Open in IMG/M
3300026532	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027570	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028866	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N3_2	Environmental	Open in IMG/M
3300029989	III_Fen_N1 coassembly	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030003	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_N2_3	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030019	II_Fen_E2 coassembly	Environmental	Open in IMG/M
3300030399	II_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030491	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Fen_E3_3	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030862	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031232	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031726	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_1	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.26
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.26
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F075099

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J11758_123740132	3300000789	Soil	IMMVPSDGKFFFANDVLRSMNMANHSSQADPPVDPQN*
JGI12636J13339_10003601	3300001154	Forest Soil	IMMVPADGKFFFANDVLRSMSVANHASQAEEPDEQQPK*
JGI12269J14319_100233004	3300001356	Peatlands Soil	KLQIMMVPADGKFFFANDVLRSMSAANQASQTEPAEQPR*
JGI12712J15308_102021882	3300001471	Forest Soil	KLQIMMVPADGKFFFANDVIRGMNLANQNTQAEPQSR*
C688J18823_100115383	3300001686	Soil	MMVPSDGKYFFANDVLKSMNMANKNSEAEQGEEK*
JGI25382J37095_100165721	3300002562	Grasslands Soil	LQIMMVPADGKFFFANDVLRSMNMANRTSQAEEAQDPPEK*
Ga0066674_104452051	3300005166	Soil	QIMMVPADGKFFFANDVLRSMNMANRTSQAEEAQDPPEK*
Ga0066673_104155732	3300005175	Soil	LQIMMVPSDGKFFFANDVLKSMNMANRGSQADQAEEPEK*
Ga0070690_1013554391	3300005330	Switchgrass Rhizosphere	DKLQIMMVPADGKFFFANDVLKSMNMANRSSEADQTQEK*
Ga0070709_116521491	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	LQIMMVPADGKFFFANDVLRSMTTANQAAQAQEPEPAPQN*
Ga0070714_1019427151	3300005435	Agricultural Soil	DKLQIMMVPSDGKFFFANDVLRSMNMANHGSQAEPPEDSQDK*
Ga0070713_1009963792	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	KLQIMMVPADGKFFFANDVLRSMNMTNQAGQAEQPQEQQR*
Ga0070730_108165361	3300005537	Surface Soil	QIMMVPADGKFFMNDVLRSMNMGAGAGAQEPTEEQQR*
Ga0070733_111113101	3300005541	Surface Soil	RLSDKLQIMMVPADGKFFMNDVLKSMNLANPAGSAGDQQR*
Ga0070732_101562511	3300005542	Surface Soil	DKLQIMMVPSDGKFFFANDMLKSMNMANKGSEADQAEEK*
Ga0070732_102429782	3300005542	Surface Soil	LSDKLQIMMVPADVKFFMNDVLKSMNMAQAATQPEPQEEQQR*
Ga0070732_103356322	3300005542	Surface Soil	IMMVPADGKFFFANDVLRSMSVANQAGQAERTEEQPR*
Ga0066661_107533401	3300005554	Soil	MVPADGKFFFANDVLRSMNVANHTSQAEQPEDPPQR*
Ga0066700_110626542	3300005559	Soil	IMMVPADGKFFFANDVLRSMNMANRTSQAEEAQDPPEK*
Ga0068855_1009583152	3300005563	Corn Rhizosphere	MMVPSDGKYFFANDVLKSMNMANKNSESDQGEEK*
Ga0066693_101239501	3300005566	Soil	SDKLQIMMVPADGKFFFANDVLRSMNMANRTSQAEEAQDPPEK*
Ga0066694_104886902	3300005574	Soil	PADGKFFFANDVLRSMNMANRTSQAEEAQDPPEK*
Ga0070761_103038721	3300005591	Soil	QIMMVPADGKFFFANDVLHSMSAATQAEQGEAQPR*
Ga0070764_100926312	3300005712	Soil	SDKLQIMMVPADGKIFFNDILHGMNTGNSASQAEGAAAEGNAQQ*
Ga0070764_108910281	3300005712	Soil	QIMMVPADGKFFFANDVLRSMNVANQSGQAEQQR*
Ga0068863_1001723361	3300005841	Switchgrass Rhizosphere	DKLQIMMVPSDGKFFFANDVLKSMNMANRGSEAEQGEEK*
Ga0080027_102205752	3300005993	Prmafrost Soil	DKLQIMMVPADGKFFFANDVLRGMNMAAQTGQGESPQGPQAR*
Ga0066696_105155661	3300006032	Soil	QIMMVPADGKFFFANDVLRSMNMANRTSQTEDAGEQGPPQR*
Ga0075028_1006282391	3300006050	Watersheds	VPADGKFFFANDVLRSMSVANHSSEAEEPEMQQPK*
Ga0075017_1001083271	3300006059	Watersheds	AERLSDKLQIMMVPADGKFFMNDVLRSMNMGNAASPTEPPEEQR*
Ga0075015_1007935731	3300006102	Watersheds	SDKLQIMMVPADGKFFFTNDVLRGMNPANHVSQVEGAAEPAEANEK*
Ga0075030_1016389861	3300006162	Watersheds	QIMMVPADGKFFFANDVMKSMTANHMTQSEVAEEPEKR*
Ga0070765_1017572151	3300006176	Soil	QIMMVPADGKFFFANDVLRGMDVASQGKQAERQTR*
Ga0070765_1019286862	3300006176	Soil	LQIMMVPADGKFFFANDVLRSMSVSNHVADAEQPEEQPK*
Ga0066710_1047065512	3300009012	Grasslands Soil	QIMMVPADGKFFFANDVLRSMNMANHTSQAEQPEDPPQR
Ga0116128_11337941	3300009518	Peatland	IMMVPADGKFFFANDVLRSMSAANQASQAERPEEQPR*
Ga0116214_14394911	3300009520	Peatlands Soil	VAERLSDKLQIMMVPADGKFFMNDVLRSMNVGGAASQAEPPEEQR*
Ga0116133_11421401	3300009623	Peatland	LQIMMVPADGKFFFANDVLRSMSVAGQGAQTEQR*
Ga0116223_102361841	3300009839	Peatlands Soil	IMMVPSDGKFFFTNDVLRSMSTANHASQAQDAEAPPQN*
Ga0126370_122156882	3300010358	Tropical Forest Soil	RLSDKLQIMMVPADGKFFMNDVLKSMNMGAPSAPAEQGEEQQR*
Ga0126377_103237002	3300010362	Tropical Forest Soil	IMMVPADGKFFFANDVLRSMNTANHVSQAELEEQPQDPPQH*
Ga0134126_119098431	3300010396	Terrestrial Soil	LQIMMVPADGKFFFANDVLKSMNMANRTSEVDQTEEK*
Ga0137393_114242301	3300011271	Vadose Zone Soil	QIMMVPSDGKFFFANDVLKSMNMSNHASEADPTEEPEK*
Ga0137382_112662631	3300012200	Vadose Zone Soil	KLQIMMVPADGKFFFANDVLRSMNMANRTSQAEEAQDPPEK*
Ga0137376_115715211	3300012208	Vadose Zone Soil	QIMMVPADGKFFFTNDVMRGMNTANHVSQADDAGAEK*
Ga0137377_106099271	3300012211	Vadose Zone Soil	IMMVPSDGKFFFANDVLKSLNMSNHGSEVDQAEGTEK*
Ga0137387_105752571	3300012349	Vadose Zone Soil	MVPSDGKFFFANDVLRSMNVANHSSQAEPDPQDK*
Ga0137361_105687901	3300012362	Vadose Zone Soil	SDKLQIMMVPADGKFFFANDVLRGMNMASQNAQTEQQPR*
Ga0137397_107797282	3300012685	Vadose Zone Soil	MMVPADGKFFFANDVLRSMNTANHVSLAEPEDPQDPK*
Ga0137419_100042031	3300012925	Vadose Zone Soil	IMMVPADGKFFFANDVLRSMSVGNQSSQVEQAEPQTR*
Ga0164304_114620801	3300012986	Soil	KLQIMMVPADGKFFFANDVLRSMNTANHVSQAGDPEDAPKQ*
Ga0164305_107530031	3300012989	Soil	VPADGKFFFANDVLRSMSMANHAGQAQDAGVDPPSN*
Ga0163162_114892742	3300013306	Switchgrass Rhizosphere	DKLQIMMVPADGKFFFANDVLKSMNMANRTSEVDQTEEK*
Ga0134075_103311982	3300014154	Grasslands Soil	MVPADGKFFFANDVLRSMNMANRTSQAEEAQDPPEK*
Ga0181518_105382801	3300014156	Bog	MVPADGKFFFANDVLRSAPMTMATKPVEPDDDPR*
Ga0181528_106502122	3300014167	Bog	DKLQIMMVPADGKFFFANDVLKGLNIASSQAESQSR*
Ga0132256_1029430521	3300015372	Arabidopsis Rhizosphere	IMMVPSDGKFFFANDVLRSMNMANHTSQAEVPEEP*
Ga0187801_101168151	3300017933	Freshwater Sediment	DKLQIMMVPADGKFFFANDVLRSMSVANHASQAEEPDAQQPK
Ga0187821_101278372	3300017936	Freshwater Sediment	DKLQIMMVPADGKFFFANDVLHSMNMANQASQSAQTEEQPR
Ga0187785_100186363	3300017947	Tropical Peatland	MMVPADGKFFFANDVLRSMNMANHGSQAEEPDDGQPK
Ga0187780_105565262	3300017973	Tropical Peatland	VPADGKFFFANDVLRSMNMANHAGQAEEPEEQQPK
Ga0187782_101067011	3300017975	Tropical Peatland	ERLSDKLQIMMVPADGKFFMNDVLKSMNMGNTATSQGEEQQR
Ga0187782_106180751	3300017975	Tropical Peatland	LQIMMVPADGKFFFANDVLRSMNMANQSSQSSQAETQEEQPR
Ga0187822_100815601	3300017994	Freshwater Sediment	DKLQIMMVPADGKFFFANDVLRSMNVANHSSQAEQPEDPADK
Ga0187810_104832552	3300018012	Freshwater Sediment	LQIMMVPADGKFFFANDVLRSMNAANHASQAEEPEDQQPK
Ga0187873_13309621	3300018013	Peatland	IMMVPADGKFFFANDVLRSMSAANQASQAERPEEQPR
Ga0187855_104649582	3300018038	Peatland	LQIMMVPADGKFFFANDVLRSMSVANHASQAEEPDEQQPK
Ga0187887_101307683	3300018043	Peatland	QIMMVPADGKFFFANDVLRSMSVANHTSQAEEPDEQQPK
Ga0187784_111466321	3300018062	Tropical Peatland	ADGKFFFANDVLRSMNMANQSSQSSQAETQEEQPR
Ga0187771_113678742	3300018088	Tropical Peatland	SDKLQIMMVPADGKFFFANDVLRSMNMANQAGQTEPPEEQPR
Ga0066669_100210565	3300018482	Grasslands Soil	DKLQIMMVPADGKFFFANDVLHSMNMANQASQSEQGEAQPH
Ga0066669_113324251	3300018482	Grasslands Soil	SDKLQIMMVPADGKFFFANDVLRSMNMANRTSQAEEAQDPPEK
Ga0193721_10163631	3300020018	Soil	QIMMVPSDGKFFFANDVLKSMNMANQGSQSEQVEGEK
Ga0187768_11147662	3300020150	Tropical Peatland	IMMVPADGKFFFANDVLRSMNMANRGSQAEEAEPK
Ga0210405_103371611	3300021171	Soil	IVMVPADGKFCFANDVLRSMSVANHSGQADAAEEPQQK
Ga0210388_115393172	3300021181	Soil	KLQIMMVPADGKFFFANDVLRSISVAGQSGQAETR
Ga0210386_100305034	3300021406	Soil	MMVPADGKFFFANDVLRSMSVANHASQAEEPDGQQPK
Ga0210386_106726052	3300021406	Soil	VPADGKFFFANDVLRSMSVANHASQAEEPDEQQPK
Ga0210386_108469132	3300021406	Soil	LQIMMVPSDGKFFMNDVLKSMNMPSAAGAAGQTEEQTR
Ga0210383_103449761	3300021407	Soil	DKLQIMMVPADGKFFFANDVLRSMSVANHASQAEEPDEQQPK
Ga0210384_100189451	3300021432	Soil	IMMVPADGKFFFANDVLRSVNMANHGSQAEQPDDSQDK
Ga0210398_100074949	3300021477	Soil	KLQIMMVPADGKFFFANDVLHSMSAANQASQAEEPR
Ga0126371_102277642	3300021560	Tropical Forest Soil	MMVPSDGKFFFANDVLRSMNMANHSSQAEQPEDPQDK
Ga0207699_112432222	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	LQIMMVPADGKFFFANDVLRSMNVANQASQSEQSGEQQR
Ga0207652_101931813	3300025921	Corn Rhizosphere	QIMMVPADGKFFFANDVLKSMNMANRSSEADQTQEK
Ga0209849_10523492	3300026215	Soil	ERLSDKLQIMMVPSDSKVFFANDVLRGMNVANRAVQADEAEATQK
Ga0209238_12745872	3300026301	Grasslands Soil	LQIMMVPADGKFFFANDVLRSMNMANRTSQAEEAQDPPEK
Ga0209375_10318561	3300026329	Soil	MMVPADGKFFFANDVLRSMNMANRTSQAEEAQDPPEK
Ga0209690_12249682	3300026524	Soil	MVPSDGKFFFANDVLRSMNMANRTSQAEEPEEAPQK
Ga0209160_10390842	3300026532	Soil	MMVPADGKFFFANDVLRSMNVANQASQAEPQEGQTR
Ga0209577_106786262	3300026552	Soil	DKLQIMMVPADGKFFFANDVLRSMSMANRSSQAEDAQDPH
Ga0208043_10139631	3300027570	Peatlands Soil	MVPADGKFFFANDVLRSMSVANHASQAEESDEQQPK
Ga0209274_106262352	3300027853	Soil	LSDKLQIMMVPADGKFFFANDVLRGMNMANQNGQAEQR
Ga0209068_104628621	3300027894	Watersheds	IMMVPADGKFFFTNDVMKSMSAGRVSQSDEAEDPAGSQK
Ga0302278_101512132	3300028866	Bog	SDKLQIMMVPADGKFFFANDVLRGMSAASEGGQTEQR
Ga0311365_100754091	3300029989	Fen	MVPADGKFFFTNDVLRGMNPANHASQAEDADPTESAKR
Ga0311339_105947001	3300029999	Palsa	SDKLQIMMVPADGKFFFANDVLRGMDLASQGKQPEQRR
Ga0302172_101519552	3300030003	Fen	LQIMMVPADGKFFFTNDVLRGMNPANHASQAEDADPTESAKR
Ga0311338_119663281	3300030007	Palsa	SDKLQIMMVPADGKFFFANDVLRGMGVANQSGQAEQR
Ga0311348_108572622	3300030019	Fen	DKLQIMMVPADGKFFFTNDVLRGMNPANHASQAEDADPTESAKR
Ga0311353_100119201	3300030399	Palsa	DKLQIMMVPADGKFFFANDVLRGMGVANQSGQAEQR
Ga0302211_100516772	3300030491	Fen	QIMMVPADGKFFFTNDVLRGMNPANHASQAEDADPTESAKR
Ga0311370_106549131	3300030503	Palsa	QIMMVPADGKFFFANDVLRGMSAVGQAAQTEPDQPR
Ga0265753_11042172	3300030862	Soil	VPADGKFFFANDVLRSMSVANHASQAEGSDEQQPK
Ga0170834_1000503111	3300031057	Forest Soil	LQIMMVPADGKFFFANDVLRGMNLANQSAQTEPQPR
Ga0302323_1002785293	3300031232	Fen	RLSDKLQIMMVPADGKIFFTNDVLRGMNPANHASQAEDADPTESAKR
Ga0318572_104496582	3300031681	Soil	LQIMMVPADGKFFFANDVLHSMNMANHSSQAGDAETK
Ga0307476_104812092	3300031715	Hardwood Forest Soil	SDKLQIMMVPADGKFFFANDVLRSMSVANQAGQVEEPR
Ga0302321_1008724731	3300031726	Fen	MMVPADGKFFFTNDVLRGMNTANHVSQAEDAGEEKQ
Ga0307475_114244192	3300031754	Hardwood Forest Soil	SDKLQIMMVPADGKFFFASDVLRGMNLANQSAQTEPQPR
Ga0307478_111449781	3300031823	Hardwood Forest Soil	LQIMMVPADGKFFFANDVLRSMSMANQSGQAEPQAR
Ga0306923_103767171	3300031910	Soil	VPSDGKFFFANDVLRSMNMTNHASQAEAPEDPQDK
Ga0308176_108500441	3300031996	Soil	QIMMVPADGKFFFANDVLRSMNVANHASQAEQGEEQPH
Ga0335078_125340462	3300032805	Soil	IMMVPSDGKFFFANDVLRSMNMANHSSQAEPEDPQDK
Ga0335080_102230291	3300032828	Soil	KLQIMMVPADGKFFFANDVLRSMNVANHASQAQDAEGPPQN
Ga0335080_118521442	3300032828	Soil	IMMVPSDGKFFFANDVLRSMNMANQNTQAEQPEDQK
Ga0335081_103181701	3300032892	Soil	IMMVPADGKFFFANDVLRSMNMANRSSQAEEAEPK
Ga0335076_108102062	3300032955	Soil	MMVPADGKFFMNDVLRSMNLGAAGSQPAQAEDQQQ
Ga0335073_117801252	3300033134	Soil	IMMVPADGKFFFANDVLRSMSAGSQATQSEQAEPQSR

Hidden Markov Model


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