Metagenome / Metatranscriptome Family F074988

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F074988
Family Type	Metagenome / Metatranscriptome
Number of Sequences	119
Average Sequence Length	132 residues
Representative Sequence	VIARPPTFNHLFDRAVAACAEAQHLSGRTAESVRRARRERASAYRVRTLIAETRDTWEGANAMYAVMRVQVERVAREMRDAGVDSASAAATIRQHIRFVLYDGGLTERDAEPVVTRASTWVDMVFAAA
Number of Associated Samples	84
Number of Associated Scaffolds	119

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	55.17 %
% of genes near scaffold ends (potentially truncated)	44.54 %
% of genes from short scaffolds (< 2000 bps)	78.15 %
Associated GOLD sequencing projects	70
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (97.479 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere (15.126 % of family members)
Environment Ontology (ENVO)	Unclassified (65.546 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (80.672 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 78.91% β-sheet: 0.00% Coil/Unstructured: 21.09%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 119 Family Scaffolds
PF01569	PAP2	18.49
PF04228	Zn_peptidase	6.72
PF01904	DUF72	2.52
PF08323	Glyco_transf_5	1.68
PF08241	Methyltransf_11	0.84
PF00982	Glyco_transf_20	0.84
PF01979	Amidohydro_1	0.84
PF01370	Epimerase	0.84
PF02518	HATPase_c	0.84
PF12704	MacB_PCD	0.84

COG ID	Name	Functional Category	% Frequency in 119 Family Scaffolds
COG2321	Predicted metalloprotease	General function prediction only [R]	6.72
COG1801	Sugar isomerase-related protein YecE, UPF0759/DUF72 family	General function prediction only [R]	2.52
COG0297	Glycogen synthase	Carbohydrate transport and metabolism [G]	1.68
COG0438	Glycosyltransferase involved in cell wall bisynthesis	Cell wall/membrane/envelope biogenesis [M]	1.68
COG0380	Trehalose-6-phosphate synthase, GT20 family	Carbohydrate transport and metabolism [G]	0.84

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	97.48 %
Unclassified	root	N/A	2.52 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	97.48 %
Unclassified	root	N/A	2.52 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	97.48 %
Unclassified	root	N/A	2.52 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	93.28 %
Unclassified	root	N/A	2.52 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	93.28 %
Unclassified	root	N/A	2.52 %

Name	Rank	Taxonomy	Distribution
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	77.31 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	12.61 %
Unclassified	root	N/A	2.52 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	77.31 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	12.61 %
Unclassified	root	N/A	2.52 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	77.31 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	12.61 %
Unclassified	root	N/A	2.52 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	77.31 %
Gemmatirosa	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa	12.61 %
Unclassified	root	N/A	2.52 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	77.31 %
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	12.61 %
Unclassified	root	N/A	2.52 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005093\|Ga0062594_100582894	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	974	Open in IMG/M
3300005093\|Ga0062594_103228208	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	511	Open in IMG/M
3300005327\|Ga0070658_10004610	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	11199	Open in IMG/M
3300005327\|Ga0070658_10615105	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	942	Open in IMG/M
3300005327\|Ga0070658_11391633	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	609	Open in IMG/M
3300005328\|Ga0070676_10364464	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	997	Open in IMG/M
3300005329\|Ga0070683_100198875	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1903	Open in IMG/M
3300005329\|Ga0070683_100435470	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1251	Open in IMG/M
3300005335\|Ga0070666_10199144	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1409	Open in IMG/M
3300005337\|Ga0070682_100953158	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	709	Open in IMG/M
3300005337\|Ga0070682_100982972	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	699	Open in IMG/M
3300005338\|Ga0068868_100375113	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1223	Open in IMG/M
3300005338\|Ga0068868_101187548	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	705	Open in IMG/M
3300005339\|Ga0070660_100468244	All Organisms → cellular organisms → Bacteria	1046	Open in IMG/M
3300005339\|Ga0070660_101906526	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	506	Open in IMG/M
3300005345\|Ga0070692_10041668	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2354	Open in IMG/M
3300005347\|Ga0070668_100254276	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1459	Open in IMG/M
3300005355\|Ga0070671_100094519	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2506	Open in IMG/M
3300005355\|Ga0070671_100761664	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	842	Open in IMG/M
3300005355\|Ga0070671_101344518	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	630	Open in IMG/M
3300005355\|Ga0070671_101703452	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	559	Open in IMG/M
3300005364\|Ga0070673_101397480	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	659	Open in IMG/M
3300005455\|Ga0070663_100201864	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1552	Open in IMG/M
3300005455\|Ga0070663_101625081	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	577	Open in IMG/M
3300005543\|Ga0070672_100183615	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1744	Open in IMG/M
3300005547\|Ga0070693_100554131	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	823	Open in IMG/M
3300005547\|Ga0070693_100664712	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	759	Open in IMG/M
3300005564\|Ga0070664_101287661	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	690	Open in IMG/M
3300005564\|Ga0070664_101297366	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	687	Open in IMG/M
3300005578\|Ga0068854_100904878	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	776	Open in IMG/M
3300005614\|Ga0068856_101421852	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	708	Open in IMG/M
3300005616\|Ga0068852_100461961	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1259	Open in IMG/M
3300005719\|Ga0068861_100951991	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	817	Open in IMG/M
3300005841\|Ga0068863_100226859	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1801	Open in IMG/M
3300005842\|Ga0068858_100593891	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1074	Open in IMG/M
3300006237\|Ga0097621_102139980	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	535	Open in IMG/M
3300006755\|Ga0079222_10606922	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	837	Open in IMG/M
3300006953\|Ga0074063_14060381	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	2603	Open in IMG/M
3300009098\|Ga0105245_10967866	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	895	Open in IMG/M
3300009148\|Ga0105243_10440684	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1220	Open in IMG/M
3300009176\|Ga0105242_10008799	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	7745	Open in IMG/M
3300009177\|Ga0105248_10722208	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1124	Open in IMG/M
3300009177\|Ga0105248_11557435	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	748	Open in IMG/M
3300009553\|Ga0105249_12565484	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	582	Open in IMG/M
3300010373\|Ga0134128_11706945	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	693	Open in IMG/M
3300011119\|Ga0105246_10562464	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	979	Open in IMG/M
3300012212\|Ga0150985_106455437	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	4021	Open in IMG/M
3300012212\|Ga0150985_120040520	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	583	Open in IMG/M
3300012469\|Ga0150984_115516689	All Organisms → cellular organisms → Bacteria	2320	Open in IMG/M
3300012955\|Ga0164298_10565631	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	773	Open in IMG/M
3300012957\|Ga0164303_11013681	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	592	Open in IMG/M
3300012961\|Ga0164302_10041205	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	2216	Open in IMG/M
3300012984\|Ga0164309_11178170	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	642	Open in IMG/M
3300012984\|Ga0164309_11671195	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	546	Open in IMG/M
3300012985\|Ga0164308_11282980	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	664	Open in IMG/M
3300012988\|Ga0164306_10211898	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1366	Open in IMG/M
3300012989\|Ga0164305_10014016	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	3980	Open in IMG/M
3300013296\|Ga0157374_10309249	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1564	Open in IMG/M
3300013297\|Ga0157378_12976947	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	525	Open in IMG/M
3300013307\|Ga0157372_10549832	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1346	Open in IMG/M
3300013308\|Ga0157375_10066116	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	3607	Open in IMG/M
3300013308\|Ga0157375_10999356	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	976	Open in IMG/M
3300013308\|Ga0157375_13067453	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	557	Open in IMG/M
3300014325\|Ga0163163_10613751	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1151	Open in IMG/M
3300014325\|Ga0163163_12125066	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	621	Open in IMG/M
3300014968\|Ga0157379_10127008	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2295	Open in IMG/M
3300015371\|Ga0132258_10020822	All Organisms → cellular organisms → Bacteria	14310	Open in IMG/M
3300015371\|Ga0132258_10021573	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	14082	Open in IMG/M
3300015371\|Ga0132258_11370692	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1787	Open in IMG/M
3300015372\|Ga0132256_100463781	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1375	Open in IMG/M
3300015373\|Ga0132257_100826571	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1158	Open in IMG/M
3300015373\|Ga0132257_102086999	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	732	Open in IMG/M
3300015374\|Ga0132255_102409184	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	803	Open in IMG/M
3300015374\|Ga0132255_104334340	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	602	Open in IMG/M
3300017792\|Ga0163161_10178054	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1629	Open in IMG/M
3300022756\|Ga0222622_10872265	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	659	Open in IMG/M
3300024055\|Ga0247794_10061743	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1050	Open in IMG/M
3300025315\|Ga0207697_10265758	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	760	Open in IMG/M
3300025321\|Ga0207656_10173272	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1032	Open in IMG/M
3300025899\|Ga0207642_10120220	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1354	Open in IMG/M
3300025903\|Ga0207680_10133058	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1641	Open in IMG/M
3300025907\|Ga0207645_10009244	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	6828	Open in IMG/M
3300025907\|Ga0207645_10053675	All Organisms → cellular organisms → Bacteria	2575	Open in IMG/M
3300025907\|Ga0207645_10272207	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1123	Open in IMG/M
3300025909\|Ga0207705_10096781	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	2167	Open in IMG/M
3300025909\|Ga0207705_11518886	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	507	Open in IMG/M
3300025919\|Ga0207657_10631674	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	834	Open in IMG/M
3300025920\|Ga0207649_11130792	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	618	Open in IMG/M
3300025925\|Ga0207650_10960872	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	726	Open in IMG/M
3300025930\|Ga0207701_11244096	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	612	Open in IMG/M
3300025931\|Ga0207644_10139394	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1866	Open in IMG/M
3300025932\|Ga0207690_10542946	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	944	Open in IMG/M
3300025934\|Ga0207686_10377517	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1074	Open in IMG/M
3300025935\|Ga0207709_10078532	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2119	Open in IMG/M
3300025940\|Ga0207691_10159724	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1978	Open in IMG/M
3300025945\|Ga0207679_10070182	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2639	Open in IMG/M
3300025945\|Ga0207679_10179990	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1748	Open in IMG/M
3300025945\|Ga0207679_11163782	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	708	Open in IMG/M
3300025949\|Ga0207667_12196435	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	509	Open in IMG/M
3300025960\|Ga0207651_10325724	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1286	Open in IMG/M
3300025981\|Ga0207640_10742981	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	845	Open in IMG/M
3300025986\|Ga0207658_10119270	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2100	Open in IMG/M
3300026041\|Ga0207639_10653494	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	973	Open in IMG/M
3300026116\|Ga0207674_10003539	All Organisms → cellular organisms → Bacteria	19069	Open in IMG/M
3300026118\|Ga0207675_101323484	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	741	Open in IMG/M
3300026142\|Ga0207698_10109241	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2314	Open in IMG/M
3300026142\|Ga0207698_10675078	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1026	Open in IMG/M
3300028381\|Ga0268264_10994568	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	845	Open in IMG/M
3300031366\|Ga0307506_10400974	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	562	Open in IMG/M
3300031858\|Ga0310892_11069538	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	571	Open in IMG/M
3300031938\|Ga0308175_100006375	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	8496	Open in IMG/M
3300031938\|Ga0308175_102502087	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	578	Open in IMG/M
3300031996\|Ga0308176_10845413	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	959	Open in IMG/M
3300031996\|Ga0308176_11155775	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	820	Open in IMG/M
3300032074\|Ga0308173_10045250	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	3172	Open in IMG/M
3300032074\|Ga0308173_11672143	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	599	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	73.95%
Environmental	Environmental	26.05%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	73.95%
Terrestrial	Environmental → Terrestrial	25.21%
Aquatic	Environmental → Aquatic	0.84%

Habitat	Taxonomy	Distribution
Rhizosphere	Host-Associated → Plants → Rhizosphere	46.22%
Soil	Environmental → Terrestrial → Soil	25.21%
Rhizoplane	Host-Associated → Plants → Rhizoplane	25.21%
Roots	Host-Associated → Plants → Roots	2.52%
Sediment	Environmental → Aquatic → Sediment	0.84%

Habitat	Taxonomy	Distribution
Soil	Host-Associated → Plants → Rhizosphere → Soil	32.77%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	19.33%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	17.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	13.45%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	7.56%
Loam	Environmental → Terrestrial → Soil → Loam	5.88%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	2.52%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.84%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	32.77%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	17.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	13.45%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	9.24%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	7.56%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	5.88%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.88%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.36%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	2.52%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.84%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.84%

Habitat	Taxonomy	Distribution
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	15.13%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	10.08%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	8.40%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	5.88%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	5.88%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	5.88%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	5.04%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	5.04%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	4.20%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	3.36%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.52%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.52%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.68%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.68%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	1.68%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.84%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.84%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.84%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.84%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.84%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.84%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.84%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.84%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.84%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.84%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.84%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006953	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300024055	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S046-202B-6	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025321	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025909	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300031366	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 25_S	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032074	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062594_1005828942	3300005093	Soil	VTRRMNFTFTQPTLFESEALSDVSETPPTFNALFDRAVAACAEAQRLSGRTAESVKKARRQRASTRRVRSLIAETRETWEGANAMYAVMRVQVERVACEMRDAGVDSASAAATIRQHIRFVLYDGGLTERDAEPVVARASTWVDQVFAAA*
Ga0062594_1032282081	3300005093	Soil	VSHRAPTFNDLFDRAVAACAEAQRLSGRSAEAVRKARLARASTRRVRILIAETRETWEGANAMYSMMRVEVERIAREMRDAGVDNAAAAARVRQHIRFVLYDGGLTERDTEPVVTRASTWVDMVFAAA*
Ga0070658_100046108	3300005327	Corn Rhizosphere	VTRRMNFTFTQPTLFESEALSDVSETPPTFNALFDRAVAACAEAQRLSGRTAESVKKARRQRASTRRVRSLIAETRETWEGANAMYAVMRVQVERVACEMRDAGVDSASAAATIRQHIRFVLYDGGLTERDAEPVVTRASTWVDQVFAAA*
Ga0070658_106151052	3300005327	Corn Rhizosphere	RTVAACAEAQRLSGRTAESAKRARQGRASTRRVRALIAETRETWEGANAMYAVMRMQVERVAREMRDAGVDSASATATIRQHIRFVLYDGGLTERDAEPVVIRATTWVDQVFAAA*
Ga0070658_113916331	3300005327	Corn Rhizosphere	RTRSQTLALLLRRHLSRNPIVTRRMPFTLISGPAEDESSGSSDVIVRNPTFNHLFDRAVAACAEAQCLSGRTAELVKKARLERASARRVRTLIAETRETWEGANAMYAVMRVQVERVAREMRDAGVDSASAAATIRQHIRFVLYDGGLAERDAEPVVIRASTWVDMVFAAA*
Ga0070676_103644642	3300005328	Miscanthus Rhizosphere	FNELFDRAVAACAEAQFLSGRTAESVRKARRERASARRLRALVAETRDTWEGANAMYAVMRVQVERVAREMRDAGVDNLSAAATIRQHIRFVLYDGGLPERDAEPVVTRASTWVDTVFAA
Ga0070676_113186321	3300005328	Miscanthus Rhizosphere	VIAKPPTFNDLFDRAVAACAEAQHLSGRTAESVRRARRERASAYRVRTLIAETRDTWEGANAMYAVMRIQVERVAREMRDAGVDSASAAATIRQHIRFVLYDGG
Ga0070683_1001988751	3300005329	Corn Rhizosphere	MNFTFTQPTLFESEALSDVSETPPTFNALFDRAVAACAEAQRLSGRTAESVKKARRQRASTRRVRSLIAETRETWEGANAMYAVMRVQVERVACEMRDAGVDSASAAATIRQHIRFVLYDGGLTERDAEPVVTRASTWVDQVFAAA*
Ga0070683_1004354701	3300005329	Corn Rhizosphere	VIAKPPTFNDLFDRAVAACAEAQHLSGRTAESVRKARLERVSAYRVRTLIAETRDTWEGANAMYAVMRVQVERVAREMRDAGVDSASAAATIRQHIRFVLYDGGLTERDTEPVVTRASTWVDMVFAAA*
Ga0070666_101991442	3300005335	Switchgrass Rhizosphere	VSAMPPTFSELFDRAVAACAEAQFLSGRSAGSVRKARLQRASARRVRALIAETRDTWEGANAMYAVMRVQVERVAREMRDAGVDNLSAAATIRQHIRFVLYDGGLTERDTEPVVTRASTWVDTVFAA*
Ga0070682_1009531581	3300005337	Corn Rhizosphere	VTRRMNFTFTQPTLFESEALSDVSETPPTFNALFDRAVAACAEAQRLSGRTAESVKKARRQRASTRRVRSLIAETRETWEGANAMYAVMRVQVERVACEMRDAGVDSASAAATIRQHIRFVLYDGGLTE
Ga0070682_1009829722	3300005337	Corn Rhizosphere	AEDESSGSSDVIVRNPTFNHLFDRAVAACAEAQCLSGRTAELVKKARLERASARRVRTLIAETRETWEGANAMYAVMRVQVERVAREMRDAGVDSASAAATIRQHIRFVLYDGGLAERDAEPVVIRASTWVDMVFAAA*
Ga0068868_1003751132	3300005338	Miscanthus Rhizosphere	VSAEPPTFNELFDRAVAACAEAQFLSGRTAGSVRKARLQRASARRVRALIAETRDTWEGANAMYAVMRVQVERVAREMRDAGVDNLSAAATIRQHIRFVLYDGGLSERDTEPVVTRASTWVDTVFAA*
Ga0068868_1011875481	3300005338	Miscanthus Rhizosphere	VIAKPPTFNDLFDRAVAACAEAQHLSGRTAESVRRARRERASAYRVRSLIAETRDTWEGANAMYAVMRVQVERVAREMRDAGLDSASAAATIRQHIRFVLYDGGLTERDTEPVVTRASTWVDMVFAAA*
Ga0070660_1004682442	3300005339	Corn Rhizosphere	VTRRSSFTFTAQPTPFESGTLSEVSAKPPTFNHLFDRAVAACAEAQRLSGRSAESVKRARQERASSRRVRALITETRETWEGANAMYAVMRVQVERVAREMRDAGVDSASAAATIRQHIRFVLYDGGLTERDAEPVVARASTWVDQVFAAA*
Ga0070660_1019065261	3300005339	Corn Rhizosphere	MRQSSFTFTTEPTRGDSGGLPEVNAKPSTFDHRFDRTVAACAEAQRLSGRTAESAKRARQGRASTRRVRALIAETRETWEGANAMYAVMRMQVERVAREMRDAGVDSASAAATIRQHIRFVLYDGGLTE
Ga0070692_100416681	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	VIAKPPTFNDLFDRAVAACAEAQHLSGRTAESVRRARRERASAYRVRTLIAETRDTWEGANAMYAVMRIQVERVAREMRDAGVDSASAAATIRQHIRFVLYDGGLTERDTEPVVTRASTWVDMVFAAA*
Ga0070668_1002542762	3300005347	Switchgrass Rhizosphere	VIARPPTFNHLFDRAVAACAEAQHLSGRTAESVRKARRERASAYRVRTLIAETRDTWEGANAMYAVMRIQVERVAREMRDAGVDSASAAATIRQHIRFVLYDGGLTERDTEPVVTRASTWVDMVFAAA*
Ga0070671_1000945191	3300005355	Switchgrass Rhizosphere	MNFTFTQPTLFESEALSDVSETPPTFNALFDRAVAACAEAQRLSGRTAESVKKARRQRASNRRVRSLIAETRETWEGANAMYAVMRVQVERVACEMRDAGVDSASAAATIRQHIRFVLYDGGLTERDAEPVVTRASTWVDQVFAAA*
Ga0070671_1007616642	3300005355	Switchgrass Rhizosphere	VAACAEAQHLSGRTAESVRRARRERASAYRVRTLIAETRDTWEGANAMYAVMRIQVERVAREMRDAGVDSASAAATIRQHIRFVLYDGGLTERDTEPVVTRASTWVDMVFAAA*
Ga0070671_1013445181	3300005355	Switchgrass Rhizosphere	VSAMPPTFSELFDRAVAACAEAQFLSGRSAGSVRKARLQRASARRVRALIAETRDTWEGANAMYAVMRVQVERVAREMRDAGVDNLSAAATIRQHIRFVLYDG
Ga0070671_1017034521	3300005355	Switchgrass Rhizosphere	VIAKSPTFNVLFDRAVAACADAQYLSGRTAESVKKARLERASTRRVKALIAEARDTWEGANAMYAVMRVQVERVAREMRDAGVDNLSAAATIRQHIRFVLYDGGLTERDAEPVVTRASTWVDTVFAA*
Ga0070673_1013974801	3300005364	Switchgrass Rhizosphere	VSAEPPTFNELFDRAVAACAEAQFLSGRTAESVRKARLERASAHRLRALVAETRDTWEGANAMYAVMRVQVERVAREMRDAGVDNLSAAATIRQHIRFVLYDGGLPERDAEPVVTRASTWVDTVFAA*
Ga0070663_1002018642	3300005455	Corn Rhizosphere	MPFTLISGPAEDESSGSSDVIVRNPTFNHLFDRAVAACAEAQCLSGRTAELVKKARLERASARRVRTLIAETRETWEGANAMYAVMRVQVERVAREMRDAGVDSASAAATIRQHIRFVLYDGGLAERDAEPVVIRASTWVDMVFAAA*
Ga0070663_1016250812	3300005455	Corn Rhizosphere	VSHRAPTFNDLFDRAVAACAEAQRLSGRSAEAVRKARLARASTRRVRILIAETRETWEGANAMYSMMRVEVERIAREMRDAGVDNAAAAARIRQHIRFVLYDGGLTERDTEPVVTRASTWVDMVF
Ga0070672_1001836151	3300005543	Miscanthus Rhizosphere	VSAEPPTFNELFDRAVAACAEAQFLSGRTAGSVRKARLQRASARRVRALIAETRDTWEGANAMYAVMRVQVERVAREMRDAGVDNLSAAATIRQHIRFVLYDGGLPERDAEPVVTRASTWVDTVFAA
Ga0070693_1005541311	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	VIAKPPTFNDLFDRAVAACAEAQHLSGRTAESVRRARRERASAYRVRTLIAETRDTWEGANAMYAVMRVQVERVAREMRDAGLDSASAAATIRQHIRFVLYDGGLTERDTEPVVTRASTWVDMVFAAA*
Ga0070693_1006647122	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	VLATTPTFNHLFNRAVAACAEAQRLSGLTAESVKKARLQRASTRRVRSLIAETRETWEGANAMYAVMRVQVERVACEMRDAGVDSASAAATIRQHIRFVLYDGGLTERDAEPVVTRASTWVDTVFAA*
Ga0070664_1000640291	3300005564	Corn Rhizosphere	MPFTLIIGPAEDESSGSSDVIVRNPTFNHLFDRAVAACAEAQCLSGRTAELVKKARLERASARRVRTLIAETRETWEGANAMYAVMRVQVERVAREMRDAGVDSASAAATIRQHIRFVLY
Ga0070664_1012876611	3300005564	Corn Rhizosphere	VSHRAPTFNDLFDRAVAACAEAQRLSGRSAEAVRKARLARASTRRVRILIAETRETWEGANAMYSMMRVEVERIAREMRDAGVDNAAAAARIRQHIRFVLYDGGLTERDTEPVVTRASTWVDMVFAAA*
Ga0070664_1012973661	3300005564	Corn Rhizosphere	VIAKPPTFNALFDRAVAACAEAQHLSGRTAESVRKARLERVSAYRVRTLIAETRDTWEGANAMYAVMRVQVERVAREMRDAGVDSASAAATIRQHIRFVLYDGGLTERDTEPVVTRASTWVDMVFAAA*
Ga0068854_1009048782	3300005578	Corn Rhizosphere	VIAKPPTFNDLFDRAVAACAEAQHLSGRTAESVRRARRERASAYRVRSLIAETRDTWEGANAMYAVMRIQVERVAREMRDAGVDSASAAATIRQHIRFVLYDGGLTERDTEPVVTRASTWVDMVFAAA*
Ga0068856_1014218521	3300005614	Corn Rhizosphere	VTRRMNFTFTQPTLFESEALSDVSETPPTFNALFDRAVAACAEAQRLSGRTAESVKKARRQRASTRRVRSLIAETRETWEGANAMYAVMRVQVERVACEMRDAGVDSASAAATIRQHIRLVLYDGGLTERDAEPVVTRASTWVDMVFAAA*
Ga0068852_1004619611	3300005616	Corn Rhizosphere	VTRRMPFTLIIGPAEDESSGSSDVIVRNPTFNHLFDRAVAACAEAQCLSGRTAELVKKARLERASARRVRTLIAETRETWEGANAMYAVMRVQVERVAREMRDAGVDSASAAATIRQHIRFVLYDGGLTERDAEPVVTRASTWVDMVFAAA*
Ga0068861_1009519912	3300005719	Switchgrass Rhizosphere	SEVIAKPPTFNDLFDRAVAACAEAQHLSGRTAESVRRARRERASAYRVRSLIAETRDTWEGANAMYAVMRIQVERVAREMRDAGLDSASAAATIRQHIRFVLYDGGLTERDTEPVVTRASTWVDMVFAAA*
Ga0068863_1002268591	3300005841	Switchgrass Rhizosphere	LFDRAVAACAEAQRLSGRTAESVKKARRQRASTRRVRSLIAETRETWEGANAMYAVMRVQVERVACEMRDAGVDSASAAATIRQHIRFVLYDGGLTERDAEPVVTRASTWVDQVFAAA*
Ga0068858_1005938911	3300005842	Switchgrass Rhizosphere	CAEAQHLSGRTAESVRKARRERASAYRVRTLIAETRDTWEGANAMYAVMRIQVERVAREMRDAGVDSASAAATIRQHIRFVLYDGGLTERDTEPVVTRASTWVDMVFAAA*
Ga0068858_1018410911	3300005842	Switchgrass Rhizosphere	VSAEPPTFNELFDRAVAACAEAQFLSGRTAGSVRKARLQRASARRVRALIAETRDTWEGANAMYAVMRVQVERVAREMRDAGVDNLSAAATIRQHIRFVLYDG
Ga0097621_1021399801	3300006237	Miscanthus Rhizosphere	VIAKPPTFNDLFDRAVAACAEAQHLSGRTAESVRRARRERASAYRVRTLIAETRDTWEGANAMYAVMRIQVERVAREMRDAGVDSASAAATIRQHIRFVLYDGGLTERDTE
Ga0079222_106069222	3300006755	Agricultural Soil	VIARPPTFNHLFDRAVAACAEAQHLSGRTAESVRRARRERASAYRVRTLIAETRDTWEGANAMYAVMRVQVERVAREMRDAGVDSASAAATIRQHIRFVLYDGGLTERDAEPVVTRASTWVDMVFAAA*
Ga0074063_140603811	3300006953	Soil	AVRSTMPTFNELFDRAVAACAEAQRLSGCTAESVKRARRERASARRLRTLITDTRDTWEGANAMYSVARVEVERVARAMRDAGVDNVAAAATIRQHIRFVLYDGGLAERDAEPVVVRASTWVDMVFAAA*
Ga0105245_109678661	3300009098	Miscanthus Rhizosphere	VAACAEAQFLSGRTAESVRKARLERASAHRLRALVAETRDTWEGANAMYAVMRVQVERVAREMRDAGVDNLSAAATIRQHIRFVLYDGGLSERDTEPVVTRASTWVDTVFAA*
Ga0105243_104406843	3300009148	Miscanthus Rhizosphere	MPPRAESGGFSEVIAKPPTFNDLFDRAVAACAEAQHLSGRTAESVRRARRERASAYRVRTLIAETRDTWEGANAMYAVMRIQVERVAREMRDAGVDSASAAATIRQHIRFVLYDGGLAEQDAEPVVA
Ga0105242_100087995	3300009176	Miscanthus Rhizosphere	MPPRAESGGFSEVIAKPPTFNDLFDRAVAACAEAQHLSGRTAESVRRARRERASAYRVRTLIAETRDTWEGANAMYAVMRVQVERVAREMRDAGLDSASAAATIRQHIRFVLYDGGLTERDTEPVVTRASTWVDTVFAA*
Ga0105248_107222082	3300009177	Switchgrass Rhizosphere	LSEVSAEPPTFNELFDRAVAACAEAQFLSGRTAGSVRKARLQRASARRVRALIAETRDTWEGANAMYAVMRVQVERVAREMRDAGVDNLSAAATIRQHIRFVLYDGGLTERDTE
Ga0105248_115574352	3300009177	Switchgrass Rhizosphere	MPPRAESGGFSEVIAKPPTFNDLFDRAVAACAEAQHLSGRTAESVRRARRERASAYRVRTLIAETRDTWEGANAMYAVMRIQVERVAREMRDAGVDSASAAATIRQHIRFVLYDGGLTERDTEPVVTRASTWVDMVFAAA*
Ga0105249_125654842	3300009553	Switchgrass Rhizosphere	RAVAACAEAQFLSGRTAGSVRKARLQRASARRVRALIAETRDTWEGANAMYAVMRVQVERVAREMRDAGVDNLSAAATIRQHIRFVLYDGGLTERDTEPVVTRASTWVDMVFAAA*
Ga0134128_117069451	3300010373	Terrestrial Soil	IVTRRSSITFTAESTRGESGGLSEVSAEPPTFNELFDRAVAACAEAQHLSGRTAESVRRARRERASAYRVRTLIAETRDTWEGANAMYAVMRVQVERVAREMRDAGVDSASAAATIRQHIRFVLYDGGLTERDTEPVVTRASTWVDTVFAA*
Ga0105246_105624642	3300011119	Miscanthus Rhizosphere	MPFTLIIGPAEDESSGSSDVIVRNPTFNHLFDRAVAACAEAQCLSGRTAELVKKARLERASARRVRTLIAETRETWEGANAMYAVMRVQVERVAREMRDAGVDSASAAATIRQHIRFVLYDGGLAERDAE
Ga0150985_1064554372	3300012212	Avena Fatua Rhizosphere	MNVNQPAFNELFDRAVAACAEAQRLSGRTAESVRRARIERASARRLKSLISETRDTWEGANAMYSVMRVQVERVAHEMREAGVDNVSAAATIRQHIRFVLYDGGLTERDAEPVVTRASTWVDMVFAAA*
Ga0150985_1200405201	3300012212	Avena Fatua Rhizosphere	WIAPRRSSFTQNSRLTLGESRGAASMSVSQTTFNDLFDRAVAACAEAQRLSGRTAESVRQARLQRASTRRLKTLIAETRETWEGANAIYSVMRTEVERVARELREAGVDNVAAAATIRQHIRFVLYDGGLTERDAEPVVTRASTWVDMVFAAA*
Ga0150984_1155166892	3300012469	Avena Fatua Rhizosphere	VDRAVPFLHHPDSQPTMNVKQPTFNELFDRAVAACAEAQRLSGRSAESVKRARLERASSRRLRGLIAETRDTWEGANAMYTVMRVQVERVAREMRDAGVDNVSAAATIRQHIRFVLYDGGLTERDAEPVVTRASTWVDMVFAAA*
Ga0164298_105656311	3300012955	Soil	LSEVIARPPTFNHLFDRAVAACAEAQHLSGRTAESVRKARRERASAYRVRTLIAETRDTWEGANAMYAVMRVQVERVAREMRDAGLDSASAAATIRQHIRFVLYDGGLTERDTEPVVTRASTWVDMVFAAA*
Ga0164303_110136812	3300012957	Soil	SGRTAESVRKARRERASAYRVRTLIAETRDTWEGANAMYAVMRIQVERVAREMRDAGVDSASAAATIRQHIRFVLDDGGLTERDTEPVVTRASTWVDMVFAAA*
Ga0164302_100412053	3300012961	Soil	MEIVTRRSSSTRTVSTRAESGGLSEVIARPPTFNHLFDRAVAACAEAQHLSGRTAESVRKARRERASAYRVRTLIAETRDTWEGANAMYAVMRVQVERVAREMRDAGLDSASAAATIRQHIRFVLYDGGLTERDTEPVVTRASTWVDMVFAAA*
Ga0164309_111781701	3300012984	Soil	LSEVSAEPPTFNELFDRAVAACAEAQFLSGRSAGSVRKARLQRASARRVRALIAETRDTWEGANAMYAVMRVQVERVAREMRDAGVDNLSAAATIRQHIRFVLYDGGLSERDTEPVVTRASTWV
Ga0164309_116711952	3300012984	Soil	VNVKPRTFNEIFDQIVAACAEAQRLSGRTAESVRKARLERASARRVRTLISETRDTWEGANAMYAVMRVQVERVACEMRDAGVDNVSAAATIRQHIRFVLYDGGLTERDAEPVV
Ga0164308_112829801	3300012985	Soil	RALAPFLRKNSRIGMEIVTRRSSSTRTVPTRAESGGLSEVIARPPTFNHLFDRAVAACAEAQHLSGRTAESVRKARRERASAYRVRTLIAETRDTWEGANAMYAVMRVQVERVAREMRDAGLDSASAAATIRQHIRFVLYDGGLTERDTEPVVTRASTWVDMVFAAA*
Ga0164306_102118981	3300012988	Soil	LSEVIARPPTFNHLFDRAVAACAEAQHLSGRTAESVRKARRERASAYRVRTLIAETRDTWEGANAMYAVMRIQVERVAREMRDAGLDSASAAATIRQHIRFVLYDGGLTERDTEPVVTRASTWVDMVFAAA*
Ga0164305_100140161	3300012989	Soil	IVTRRSSSTRTVPTRAESGGLSEVIARPPTFNHLFDRAVAACAEAQHLSGRTAESVRKARRERASAYRVRTLIAETRDTWEGANAMYAVMRVQVERVAREMRDAGLDSASAAATIRQHIRFVLYDGGLTERDTEPVVTRASTWVDMVFAAA*
Ga0157374_103092491	3300013296	Miscanthus Rhizosphere	LSEVSAEPPTFNELFDRAVAACAEAQFLSGRTAGSVRKARLQRASARRVRALIAETRDTWEGANAMYAVMRVQVERVAREMRDAGVDNLSAAATIRQHIRFVLYDGGLAERDAEPVVIRASTWVDMVFAAA*
Ga0157378_129769471	3300013297	Miscanthus Rhizosphere	VAACAEAQFLSGRTAGSVRKARLQRASARRVRALIAETRDTWEGANAMYAVMRVQVERVALEMRDAGVDNLSAAATIRQHIRFVLYDGGLTERDTEPVVTRASTWVDTVFAA*
Ga0157372_105498321	3300013307	Corn Rhizosphere	MPFTLIIGPAEDESSGSSDVIVRNPTFNHLFDRAVAACAEAQCLSGRTAELVKKARLERASARRVRTLIAETRETWEGANAMYAVMRVQVERVAREMRDAGVDSASAAATIRQHIRFVLYDGGLTERDAEPVVIRATTWVDQVFAAA*
Ga0157375_100661164	3300013308	Miscanthus Rhizosphere	MEIVTRRSSSTSTMPPRAESGGFSEVIAKPPTFNDLFDRAVAACAEAQHLSGRTAESVRRARRERASAYRVRTLIAETRDTWEGANAMYAVMRIQVERVAREMRDAGVDSASAAATIRQHIRFVLYDGGLTERDTEPVVTRASTWVDMVFAAA*
Ga0157375_109993562	3300013308	Miscanthus Rhizosphere	LSEVSAEPPTFNELFDRAVAACAEAQFLSGRTAGSVRKARLQRASARRVRALIAETRDTWEGANAMYAVMRVQVERVAREMRDAGVDNLSAAATIRQHIRFVLYDGGLTERDTEPVVTRASTWVDTVFAA*
Ga0157375_130674531	3300013308	Miscanthus Rhizosphere	MPPRAESGGFSEVIARPPTFNHLFDRAVAACAEAQHLSGRTAESVRKARRERASAYRVRTLIAETRDTWEGANAMYAVMRIQVERVAREMRDAGVDSASAAATIRQHIRFVLYDGGLTERDTEPV
Ga0163163_106137513	3300014325	Switchgrass Rhizosphere	MNFTFTQPTLFESEALSDVSETPPTFNALFDRAVAACAEAQRLSGRTAESVKKARRQRASTRRVRSLIAETRETWEGANAMYAVMRVQVERVACEMRDAGVDSASAAATIRQHIRFVLYDGGL
Ga0163163_121250662	3300014325	Switchgrass Rhizosphere	NHLFDRAVAACAEAQCLSGRTAELVKKARLERASARRVRTLIAETRETWEGANAMYAVMRVQVERVAREMRDAGVDSASAAATIRQHIRFVLYDGGLAERDAEPVVIRASTWVDMVFAAA
Ga0157379_101270083	3300014968	Switchgrass Rhizosphere	MPPRAESGGFSEVIAKPPTFNDLFDRAVAACAEAQHLSGRTAESVRRARRERASAYRVRSLIAETRDTWEGANAMYAVMRIQVERVAREMRDAGVDSASAAATIRQHIRFVLYDGGLTERDTEPVVTRASTWVDMVFAAA*
Ga0132258_100208223	3300015371	Arabidopsis Rhizosphere	VTQASSFPGQGQPTHRESRRTRDASVDQLPFNELFDHAVAACGEAQRLSALSSDSVKCARLEDAPARRVRALVAETRDTWEGANAMYAVMRIQVERVAGEMREAGVDNRSAGATIRQHIRFVLYDEGLTERSAEPVVARASTWVDMVFAAA*
Ga0132258_100215739	3300015371	Arabidopsis Rhizosphere	VDRVVPFLLHPGYQPTMNVKQQTFNELFDRAVAACAEAQRLSGRSAESVKRARLERASARRLHGLIAETRDTWEGANAMYTVMRVEVERVAREMRDAGVDNVAAGATIRQHIRFVLYDEGLTERDAEPVVTRASTWVDMVFAAA*
Ga0132258_113706922	3300015371	Arabidopsis Rhizosphere	VIAKPPTFTELFDRAVAVCAEAQHLSGRTAESVRKARLERASAYRVRTLIAETRDTWEGANAMYAVMRVQVERVAREMRDSGVDSVSAAATIRQHIRFVLYDGGLTERDTEPVVTRASTWVDMVFAAA*
Ga0132256_1004637812	3300015372	Arabidopsis Rhizosphere	MEIVTRRSSSTRTVSTRAESGGLSEVIAKPPTFNALFDRAVAVCAEAQHLSGRTAESVRKARLERASAYRVRTLIAETRDTWEGANAMYAVMRVQVERVAREMRDSGVDSVSAAATIRQHIRFVLYDGGLTERDTEPVVTRASTWVDMVFAAA*
Ga0132257_1008265712	3300015373	Arabidopsis Rhizosphere	VDRAVPFLLHPGYQPTMNVKQQTFNELFDRAVAACAEAQRLSGRSAESVKRARLERASARRLHGLIAETRDTWEGANAMYTVMRVEVERVAREMRDAGVDNVAAGATIRQHIRFVLYDGGLTERDAEPVVTRASTWVDMVFAAP*
Ga0132257_1020869991	3300015373	Arabidopsis Rhizosphere	LSEVIAKTPTFNDLFDRAVGACAEAQRLSGRTAESVRKARLERASARPVRTLIAETRDTWEGANAMYAVMRVQVERVAREMRDAGVDSASAAATIRQHIRFVLYDGGLTERDAEPVVTRASTWVDMVFAAA*
Ga0132255_1024091841	3300015374	Arabidopsis Rhizosphere	VTRRSIFPFTAQPTFFELEALSDVSTKPPTFNHVFDRAVAACAEAQRLSARTAESVKKARLERASTRRVRVLIAETRETWESANAMYAVMRVQVERVAREMRDAGVDNLSAAATIRQHIRFVLYDGGLSERDTEPVVTRASTWVDTVFAA*
Ga0132255_1043343401	3300015374	Arabidopsis Rhizosphere	MEIVTRRSSSTRTVSTRAESGGLSEVIAKPPTFNALFDRAVAACAEAQHLSGRTAESVRKARLERASAYRVRTLIAETRDTWEGANAMYAVMRVQVERVAREMRDAGLDSASAAATIRQHIRFVLYDGGLTERDTEPVVTRASTWVDM
Ga0163161_101780544	3300017792	Switchgrass Rhizosphere	VIAKPPTFNDLFDRAVAACAEAQHLSGRTAESVRRARRERASAYRVRTLIAETRDTWEGANAMYAVMRVQVERVAREMRDAGLDSASAAATIRQHIRFVLYDGGLTERDTEP
Ga0222622_108722651	3300022756	Groundwater Sediment	PTFNELFDRAVAACAEAQRLSGRSAESVKRARLERASARRLRGLIAETRDTWEGANAMYTVMRVEVERVAREMRDAGVDNVSAAATIRQHIRFVLYDGGLTERDAEPVVTRASTWVDMVFAAA
Ga0247794_100617431	3300024055	Soil	ACAEAQCLSGRTAELVKKARLERASARRVRTLIAETRETWEGANAMYAVMRVQVERVAREMRDAGVDSASAAATIRQHIRFVLYDGGLTERDTEPVVTRASTWVDMVFAAA
Ga0207697_102657581	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	VIAQPPTFNELFDRAAAACAEAQHLSGRTAESVRRARRERESAYRVRTLIAETRDTWEGANAMYAVMRVQVERVAREMRDAGLDSASAAATIRQHIRFVLYDGGLTERDTEPVVTRAS
Ga0207656_101732721	3300025321	Corn Rhizosphere	VTRRMPFTLISGPAEDESSGSSDVIVRNPTFNHLFDRAVAACAEAQCLSGRTAELVKKARLERASARRVRTLIAETRETWEGANAMYAVMRVQVERVAREMRDAGVDSASAAATIRQHIRFVLYDGGLAERDAEPVVIRASTWVDMVFAAA
Ga0207642_101202202	3300025899	Miscanthus Rhizosphere	VIAKPPTFNDLFDRAVAACAEAQHLSGRTAESVRRARRERASAYRVRSLIAETRDTWEGANAMYAVMRVQVERVAREMRDAGLDSASAAATIRQHIRFVLYDGGLTERDTEPVVTRASTWVDMVFAAA
Ga0207680_101330583	3300025903	Switchgrass Rhizosphere	VSAMPPTFSELFDRAVAACAEAQFLSGRSAGSVRKARLQRASARRVRALIAETRDTWEGANAMYAVMRVQVERVAREMRDAGVDNLSAAATIRQHIRFVLYDGGLTERDTEPVVTRASTWVDTVFAA
Ga0207645_100092442	3300025907	Miscanthus Rhizosphere	VSHRAPTFNDLFDRAVAACAEAQRLSGRSAEAVRKARLARASTRRVRILIAETRETWEGANAMYSMMRVEVERIAREMRDAGVDNAAAAARVRQHIRFVLYDGGLTERDTEPVVTRASTWVDMVFAAA
Ga0207645_100536751	3300025907	Miscanthus Rhizosphere	VTRRSSITFTAESTRGESGGLSEVSAEPPTFNELFDRAVAACAEAQFLSGRTAGSVRKARLQRASARRVRALIAETRDTWEGANAMYAVMRVQVERVAREMRDAGVDNLSAAATIRQHIRFVLYDGGLSERDTEPVVTRAS
Ga0207645_102722071	3300025907	Miscanthus Rhizosphere	VIAKPPTFNDLFDRAVAACAEAQHLSGRTAESVRRARRERASAYRVRTLIAETRDTWEGANAMYAVMRIQVERVAREMRDAGVDSASAAATIRQHIRFVLYDGGLTERDTEPVVTRAST
Ga0207705_100967811	3300025909	Corn Rhizosphere	MNFTFTQPTLFESEALSDVSETPPTFNALFDRAVAACAEAQRLSGRTAESVKKARRQRASTRRVRSLIAETRETWEGANAMYAVMRVQVERVACEMRDAGVDSASAAATIRQHIRFVLYDGGLTERDAEPVVTRASTWVDQVFAAA
Ga0207705_115188861	3300025909	Corn Rhizosphere	SFTFTTEPTRGDSGGLPEVNAKPSTFDHRCDRTVAACAEAQRLSGRTAESAKRARQGRASTRRVRALIAETRETWEGANAMYAVMRMQVERVAREMRDAGVDSASATATIRQHIRFVLYDGGLTERDAEPVVIRATTWVDQVFAAA
Ga0207657_106316741	3300025919	Corn Rhizosphere	VTRRSSFTFTAQPTPFESGTLSEVSAKPPTFNHLFDRAVAACAEAQRLSGRSAESVKRARQERASSRRVRALITETRETWEGANAMYAVMRVQVERVAREMRDAGVDSASAAATIRQHIRFVLYDGGLTERDAEPVVARASTWVDQVFAAA
Ga0207649_111307921	3300025920	Corn Rhizosphere	CVGFSPEERIVTRRMNFTFTQPTLFESEALSDVSETPPTFNALFDRAVAACAEAQRLSGRTAESVKKARRQRASTRRVRSLIAETRETWEGANAMYAVMRVQVERVACEMRDAGVDSASAAATIRQHIRFVLYDGGLTERDAEPVVTRASTWVDQVFAAA
Ga0207650_109608721	3300025925	Switchgrass Rhizosphere	VTRRMPFTLIIGPAEDESSGSSDVIVRNPTFNHLFDRAVAACAEAQCLSGRTAELVKKARLERASARRVRTLIAETRETWEGANAMYAVMRVQVERVAREMRDAGVDSASAAATIRQHIRFVLYDGGLAERDAEPVVIRASTWVDMVFAAA
Ga0207701_112440961	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	AEAQHLSGRTAESVRRARRERASAYRVRTLIAETRDTWEGANAMYAVMRIQVERVAREMRDAGVDSASAAATIRQHIRFVLYDGGLTERDTEPVVTRASTWVDMVFAAA
Ga0207644_101393943	3300025931	Switchgrass Rhizosphere	VTRRMNFTFTQPTLFESEALSDVSETPPTFNALFDRAVAACAEAQRLSGRTAESVKKARRQRASTRRVRSLIAETRETWEGANAMYAVMRVQVERVACEMRDAGVDSASAAATIRQHIRFVLYDGGLTERDAEPVVTRASTWVDQVFAAA
Ga0207690_105429462	3300025932	Corn Rhizosphere	MNFTFTQPTLFESEALSDVSETPPTFNALFDRAVAACAEAQRLSGRTAESVKKARRQRASTRRVRSLIAETRETWEGANAMYAVMRVQVERVAREMRDAGVDSASAAATIRQHIRFVLYDGGLTERDAEPVVAR
Ga0207686_103775171	3300025934	Miscanthus Rhizosphere	VIAKPPTFNDLFDRAVAACAEAQHLSGRTAESVRRARRERASAYRVRSLIAETRDTWEGANAMYAVMRVQVERVAREMRDAGLDSASAAATIRQHIRFVLYDGG
Ga0207709_100785324	3300025935	Miscanthus Rhizosphere	VIAKPPTFNDLFDRAVAACAEAQHLSGRTAESVRKARRERASAYRVRTLIAETRDTWEGANAMYAVMRIQVERVAREMRDAGVDSASAAATIRQHIRFVLYDGGLTERDTEPVVTRAS
Ga0207691_101597243	3300025940	Miscanthus Rhizosphere	VSAEPPTFNELFDRAVAACAEAQFLSGRTAGSVRKARLQRASARRVRALIAETRDTWEGANAMYAVMRVQVERVAREMRDAGVDNLSAAATIRQHIRFVLYDGGLPERDAEPVVTRASTWVDTVF
Ga0207679_100701824	3300025945	Corn Rhizosphere	MPFTLIIGPAEDESSGSSDVIVRNPTFNHLFDRAVAACAEAQCLSGRTAELVKKARLERASARRVRTLIAETRETWEGANAMYAVMRVQVERVAREMRDAGVDSASAAATIRQHIRFVLYDGGLAERDAEPVVIRASTWVDMVFAAA
Ga0207679_101799901	3300025945	Corn Rhizosphere	ACAEAQHLSGRTAESVRKARLERVSAYRVRTLIAETRDTWEGANAMYAVMRVQVERVAREMRDAGVDSASAAATIRQHIRFVLYDGGLTERDTEPVVTRASTWVDMVFAAA
Ga0207679_111637821	3300025945	Corn Rhizosphere	VSHRAPTFNDLFDRAGAAGAEAQRLSGRSAEAVRKARLARASTRRVRILIAETRETWEGANAMYSMMRVEVERIAREMRDAGVDNAAAAARIRQHIRFVLYDGGLTERDTEPVVTRASTWVDMVFAAA
Ga0207667_121964351	3300025949	Corn Rhizosphere	GRLQFRERSRGKCVGFSPEERIVTRRMNFTFTQPTLFESEALSDVSETPPTFNALFDRAVAACAEAQRLSGRTAESVKKARRQRASTRRVRSLIAETRETWEGANAMYAVMRVQVERVACEMRDAGVDSASAAATIRQHIRFVLYDGGLTERDAEPVVTRASTWVDQVF
Ga0207651_103257241	3300025960	Switchgrass Rhizosphere	AQYLSGRTAESVKKARLERASTRRVKALIAEARDTWEGANAMYAVMRVQVERVAREMRDAGVDNLSAAATIRQHIRFVLYDGGLTERDTEPVVTRASTWVDMVFAAA
Ga0207640_107429812	3300025981	Corn Rhizosphere	VSAEPPTFNELFDRAVAACAEAQFLSGRTAGSVRKARLQRASARRVRALIAETRDTWEGANAMYAVMRVQVERVAREMRDAGVDNLSAAATIRQHIRFVLYDGGLSERDTEPVVTRASTWVDTVFAA
Ga0207658_101192703	3300025986	Switchgrass Rhizosphere	VTRRSSITFTAESTRGESGGLSEVSAEPPTFNELFDRAVAACAEAQFLSGRTAGSVRKARLQRASARRVRALIAETRDTWEGANAMYAVMRVQVERVAREMRDAGVDNLSAAATIRQHIRFVLYDGGLSERDTEPVVTRASTWVDTVFAA
Ga0207639_106534942	3300026041	Corn Rhizosphere	VIAKPPTFNDLFDRAVAACAEAQHLSGRTAESVRRARRERASAYRVRTLIAETRDTWEGANAMYAVMRVQVERVAREMRDAGVDSASAAATIRQHIRFVLYDGGLTERDAEPVVARASTWVDQVFAAA
Ga0207674_1000353912	3300026116	Corn Rhizosphere	MNFTFTQPTLFESEALSDVSETPPTFNALFDRAVAACAEAQRLSGRTAESVKKARRQRASTRRLRSLIAETRETWEGANAMYAVMRVQVERVACEMRDAGVDSASAAATIRQHIRFVLYDGGLTERDAEPVVTRASTWVDQVFAAA
Ga0207675_1013234841	3300026118	Switchgrass Rhizosphere	FSEVIAKPPTFNDLFDRAVAACAEAQHLSGRTAESVRRARRERASAYRVRSLIAETRDTWEGANAMYAVMRIQVERVAREMRDAGVDSASAAATIRQHIRFVLYDGGLTERDTEPVVTRASTWVDMVFAAA
Ga0207698_101092413	3300026142	Corn Rhizosphere	VIAKPPTFNDLFDRAVAACAEAQHLSGRTAESVRRARRERASAYRVRTLIAETRDTWEGANAMYAVMRIQVERVAREMRDAGVDSASAAATIRQHIRFVLYDEGLTERDTEPVVTRASTWVDMVFAAA
Ga0207698_106750782	3300026142	Corn Rhizosphere	VSAEPPTFNELFDRAVAACAEAQFLSGRTAESVRKARRERASARRLRALVAETRDTWEGANAMYAVMRVQVERVAREMRDAGVDNLSAAATIRQHIRFVLYDGGLPERDAEPVVTRASTWVDTVFAA
Ga0268264_109945682	3300028381	Switchgrass Rhizosphere	VIAKPPTFNDLFDRAVAACAEAQHLSGRTAESVRRARRERASAYRVRTLIAETRDTWEGANAMYAVMRIQVERVAREMRDAGVDSASAAATIRQHIRFVLYDGGLTERDTEPVVTRASTWVDMVFAAA
Ga0307506_104009741	3300031366	Soil	VTHRSSFTDESQPTHDESRWPPAVSIEKPTFNELFDRAVAACAEAQRLSGCTAESVKRARRERASARRLRTLITDTRDTWEGANAMYSVARVEVERVARAMRDAGVDNVAAAATIRQHIRFVLYDGGLAERDAEPVVVRASTWVDMVFAAA
Ga0310892_110695381	3300031858	Soil	VSHRAPTFNDLFDRAVAACAEAQRLSGRSAEAVRKARLARASTRRVRILIAETRETWEGANAMYSMMRVEVERIAREMRDAGVDNAAAAARVRQHIRFVLYDGGLTERDTEPVVTRASTWVD
Ga0308175_1000063756	3300031938	Soil	VTRLSSFPVTTEPTRSDSGVLADVSVGPPTFNDLFDRAVAACAEAQRLSGRSAESVKKARLERAPVRRVRTLLVETRDTWEGANAMYAVMRVQVERVAREMREAGLDSASAAATIRQHIRFVLYDGGLNERDAEPVVTRASLWVDMVFAAA
Ga0308175_1025020871	3300031938	Soil	GGSSFTITAEPTRNESGVLLDVSANPQRFNDLFDRAVEGCAEAQHLAGRTAESVKRARLERASARRVRALITETRDTWEGANAMYAVMRIQVERVALEMRDAGVDNAAAAATIRQHIRFVLYDGGLTERDAEPVVARASTWVDMVFAAA
Ga0308176_108454131	3300031996	Soil	MRQSSFTFTTEPTRGDSGGLPEVNAKPSTFDHHFDRMVAACAEAQRLSGRTAESAKKARQGRASTRRVRALIAETRETWEGANAMYAVMRMQVERVAREMRDAGVDSASATATIRQHIRFVLYDGGLTERDAEPVVIRATTWVDQVFAAA
Ga0308176_111557751	3300031996	Soil	VSAKPPTFNVLFDRAVAACADAQYLSGRTAESVKKARLERASARRVKALIVEARDTWEGANAMYAVMRVQVERVAREMRDAGVDNLSAAATIRQHIRFVLYDGGLTERDAEPVVTRASTWVDTVFAA
Ga0308173_100452502	3300032074	Soil	VSAKPPTFNELFDRAVAACAEAQFLSGRTAESVRKARLERASAHRLRALVAETRDTWEGANAMYAVMRVQVERVAREMRDAGVDNLSAAATIRQHIRFVLYDGGLPERDAEPVVTRASTWVDTVFAA
Ga0308173_116721431	3300032074	Soil	MRQSSFTFTTEPTRGDSGGLPEVNAKPSTFDHHFDRMVAACAEAQRLSGRTAESAKKARQRRASTRRVRTLIAETRETWEGANAMYAVMRMQVERVAREMRDAGVDSASAAATIRQHIRFVLYDGGLTERDAEPVVIR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F074988

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences