NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F074942

Metagenome / Metatranscriptome Family F074942

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F074942
Family Type Metagenome / Metatranscriptome
Number of Sequences 119
Average Sequence Length 54 residues
Representative Sequence MPSSAYFRRQADICLRLSLIASDEEVSNRLIKMSREYLAKGDALAGGEADAGPP
Number of Associated Samples 109
Number of Associated Scaffolds 119

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 92.52 %
% of genes near scaffold ends (potentially truncated) 83.19 %
% of genes from short scaffolds (< 2000 bps) 71.43 %
Associated GOLD sequencing projects 105
AlphaFold2 3D model prediction Yes
3D model pTM-score0.70

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (73.109 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(24.370 % of family members)
Environment Ontology (ENVO) Unclassified
(26.891 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(36.975 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 53.66%    β-sheet: 0.00%    Coil/Unstructured: 46.34%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.70
Powered by PDBe Molstar

Structural matches with SCOPe domains

SCOP familySCOP domainRepresentative PDBTM-score
a.24.16.0: automated matchesd1wola_1wol0.95403
a.24.16.3: HEPN domaind1ufba_1ufb0.90664
f.14.1.4: TRPM-like (melastatin-like transient receptor potential) channelsd6bcoa26bco0.90278
a.25.1.1: Ferritind1lkoa11lko0.90091
a.25.1.1: Ferritind4iwka_4iwk0.89884

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 119 Family Scaffolds
PF00355Rieske 14.29
PF03401TctC 3.36
PF02469Fasciclin 3.36
PF00144Beta-lactamase 2.52
PF04199Cyclase 1.68
PF13437HlyD_3 1.68
PF01925TauE 0.84
PF00118Cpn60_TCP1 0.84
PF14378PAP2_3 0.84
PF13546DDE_5 0.84
PF01609DDE_Tnp_1 0.84
PF10099RskA 0.84
PF00166Cpn10 0.84
PF00872Transposase_mut 0.84
PF06472ABC_membrane_2 0.84
PF01427Peptidase_M15 0.84

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 119 Family Scaffolds
COG2335Uncaracterized surface protein containing fasciclin (FAS1) repeatsGeneral function prediction only [R] 3.36
COG3181Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctCEnergy production and conversion [C] 3.36
COG1680CubicO group peptidase, beta-lactamase class C familyDefense mechanisms [V] 2.52
COG1686D-alanyl-D-alanine carboxypeptidaseCell wall/membrane/envelope biogenesis [M] 2.52
COG2367Beta-lactamase class ADefense mechanisms [V] 2.52
COG1878Kynurenine formamidaseAmino acid transport and metabolism [E] 1.68
COG0234Co-chaperonin GroES (HSP10)Posttranslational modification, protein turnover, chaperones [O] 0.84
COG0459Chaperonin GroEL (HSP60 family)Posttranslational modification, protein turnover, chaperones [O] 0.84
COG0730Sulfite exporter TauE/SafE/YfcA and related permeases, UPF0721 familyInorganic ion transport and metabolism [P] 0.84
COG2173D-alanyl-D-alanine dipeptidaseCell wall/membrane/envelope biogenesis [M] 0.84
COG3039Transposase and inactivated derivatives, IS5 familyMobilome: prophages, transposons [X] 0.84
COG3293TransposaseMobilome: prophages, transposons [X] 0.84
COG3328Transposase (or an inactivated derivative)Mobilome: prophages, transposons [X] 0.84
COG3385IS4 transposase InsGMobilome: prophages, transposons [X] 0.84
COG5421TransposaseMobilome: prophages, transposons [X] 0.84
COG5433Predicted transposase YbfD/YdcC associated with H repeatsMobilome: prophages, transposons [X] 0.84
COG5659SRSO17 transposaseMobilome: prophages, transposons [X] 0.84

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms73.11 %
UnclassifiedrootN/A26.89 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000787|JGI11643J11755_11332780All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria624Open in IMG/M
3300001661|JGI12053J15887_10000363All Organisms → cellular organisms → Bacteria → Proteobacteria18093Open in IMG/M
3300001867|JGI12627J18819_10271811All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria682Open in IMG/M
3300002075|JGI24738J21930_10009397All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2200Open in IMG/M
3300004114|Ga0062593_103487242All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7505Open in IMG/M
3300004156|Ga0062589_102030189All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7584Open in IMG/M
3300004157|Ga0062590_101203920Not Available739Open in IMG/M
3300005167|Ga0066672_10555024All Organisms → cellular organisms → Bacteria → Proteobacteria744Open in IMG/M
3300005332|Ga0066388_106518846All Organisms → cellular organisms → Bacteria → Proteobacteria588Open in IMG/M
3300005339|Ga0070660_100440363Not Available1080Open in IMG/M
3300005356|Ga0070674_101699587All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7571Open in IMG/M
3300005440|Ga0070705_100486264Not Available934Open in IMG/M
3300005466|Ga0070685_10054034All Organisms → cellular organisms → Bacteria → Proteobacteria2329Open in IMG/M
3300005518|Ga0070699_101776666All Organisms → cellular organisms → Bacteria → Proteobacteria564Open in IMG/M
3300005713|Ga0066905_102099966All Organisms → cellular organisms → Bacteria → Proteobacteria525Open in IMG/M
3300005764|Ga0066903_108556319All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium521Open in IMG/M
3300005840|Ga0068870_10051402All Organisms → cellular organisms → Bacteria → Proteobacteria2181Open in IMG/M
3300006028|Ga0070717_10125594All Organisms → cellular organisms → Bacteria → Proteobacteria2202Open in IMG/M
3300006042|Ga0075368_10089051Not Available1262Open in IMG/M
3300006358|Ga0068871_100137017All Organisms → cellular organisms → Bacteria → Proteobacteria2079Open in IMG/M
3300006604|Ga0074060_10007900All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → unclassified Alcaligenaceae → Alcaligenaceae bacterium859Open in IMG/M
3300006903|Ga0075426_10316201All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1144Open in IMG/M
3300006904|Ga0075424_102539176All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria536Open in IMG/M
3300006953|Ga0074063_10123061All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria616Open in IMG/M
3300009090|Ga0099827_11368259All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium616Open in IMG/M
3300009545|Ga0105237_10103743All Organisms → cellular organisms → Bacteria → Proteobacteria2835Open in IMG/M
3300009792|Ga0126374_10084216All Organisms → cellular organisms → Bacteria → Proteobacteria1750Open in IMG/M
3300010043|Ga0126380_10788756All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Malikia → Malikia spinosa776Open in IMG/M
3300010396|Ga0134126_10686194Not Available1165Open in IMG/M
3300010399|Ga0134127_10122435All Organisms → cellular organisms → Bacteria → Proteobacteria2317Open in IMG/M
3300012198|Ga0137364_10469948All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → unclassified Alcaligenaceae → Alcaligenaceae bacterium944Open in IMG/M
3300012212|Ga0150985_101705444All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium589Open in IMG/M
3300012356|Ga0137371_11105926All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7596Open in IMG/M
3300012469|Ga0150984_100814222All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium610Open in IMG/M
3300012901|Ga0157288_10035838All Organisms → cellular organisms → Bacteria1068Open in IMG/M
3300012901|Ga0157288_10314134All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria554Open in IMG/M
3300012923|Ga0137359_11684191All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria522Open in IMG/M
3300012984|Ga0164309_11650921All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria549Open in IMG/M
3300014497|Ga0182008_10483994All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Malikia → Malikia spinosa678Open in IMG/M
3300015371|Ga0132258_10376935All Organisms → cellular organisms → Bacteria → Proteobacteria3517Open in IMG/M
3300015371|Ga0132258_10890734All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium2247Open in IMG/M
3300018067|Ga0184611_1339397All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria516Open in IMG/M
3300018433|Ga0066667_12281601All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7506Open in IMG/M
3300021086|Ga0179596_10714227All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium507Open in IMG/M
3300021363|Ga0193699_10493657All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium500Open in IMG/M
3300021560|Ga0126371_12872393All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium584Open in IMG/M
3300021560|Ga0126371_13597239All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium523Open in IMG/M
3300025903|Ga0207680_11329528All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria511Open in IMG/M
3300025929|Ga0207664_10497495Not Available1091Open in IMG/M
3300025933|Ga0207706_10871060All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Malikia → Malikia spinosa762Open in IMG/M
3300025934|Ga0207686_10519847Not Available926Open in IMG/M
3300025936|Ga0207670_10253845All Organisms → cellular organisms → Bacteria1360Open in IMG/M
3300025944|Ga0207661_11949313All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria533Open in IMG/M
3300026542|Ga0209805_1407834All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium524Open in IMG/M
3300027388|Ga0208995_1020567Not Available1142Open in IMG/M
3300027646|Ga0209466_1014300Not Available1672Open in IMG/M
3300027669|Ga0208981_1008942All Organisms → cellular organisms → Bacteria2535Open in IMG/M
3300027681|Ga0208991_1101466All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Malikia → Malikia spinosa863Open in IMG/M
3300027748|Ga0209689_1013214All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales5348Open in IMG/M
3300027882|Ga0209590_10741529All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium627Open in IMG/M
3300027907|Ga0207428_10994153All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria590Open in IMG/M
3300028379|Ga0268266_10027326All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria4852Open in IMG/M
3300028717|Ga0307298_10009364All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium2423Open in IMG/M
3300028718|Ga0307307_10207860All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Malikia → Malikia spinosa620Open in IMG/M
3300028720|Ga0307317_10274504All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7569Open in IMG/M
3300028793|Ga0307299_10014048All Organisms → cellular organisms → Bacteria2841Open in IMG/M
3300028811|Ga0307292_10389893All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria591Open in IMG/M
3300028828|Ga0307312_10682771All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7680Open in IMG/M
3300028876|Ga0307286_10202482Not Available720Open in IMG/M
3300028880|Ga0307300_10155451All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium722Open in IMG/M
3300030997|Ga0073997_12251640Not Available528Open in IMG/M
3300031199|Ga0307495_10150139All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria602Open in IMG/M
3300031231|Ga0170824_108874422Not Available1486Open in IMG/M
3300031366|Ga0307506_10016716Not Available1749Open in IMG/M
3300031446|Ga0170820_17442937Not Available1425Open in IMG/M
3300031474|Ga0170818_107380988Not Available1544Open in IMG/M
3300031546|Ga0318538_10688540All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium554Open in IMG/M
3300031564|Ga0318573_10020721All Organisms → cellular organisms → Bacteria → Proteobacteria2957Open in IMG/M
3300031564|Ga0318573_10073944Not Available1708Open in IMG/M
3300031573|Ga0310915_11280544All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium505Open in IMG/M
3300031680|Ga0318574_10341617All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → unclassified Alcaligenaceae → Alcaligenaceae bacterium872Open in IMG/M
3300031680|Ga0318574_10417466All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Malikia → Malikia spinosa784Open in IMG/M
3300031680|Ga0318574_10637820All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium624Open in IMG/M
3300031719|Ga0306917_10176536Not Available1603Open in IMG/M
3300031723|Ga0318493_10362211All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Malikia → Malikia spinosa789Open in IMG/M
3300031724|Ga0318500_10007011All Organisms → cellular organisms → Bacteria → Proteobacteria3722Open in IMG/M
3300031724|Ga0318500_10027905All Organisms → cellular organisms → Bacteria → Proteobacteria2232Open in IMG/M
3300031748|Ga0318492_10116143All Organisms → cellular organisms → Bacteria1327Open in IMG/M
3300031751|Ga0318494_10413193All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Malikia → Malikia spinosa783Open in IMG/M
3300031768|Ga0318509_10005951All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria4921Open in IMG/M
3300031770|Ga0318521_10001456All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae7829Open in IMG/M
3300031771|Ga0318546_10501702All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Malikia → Malikia spinosa851Open in IMG/M
3300031778|Ga0318498_10035993All Organisms → cellular organisms → Bacteria → Proteobacteria2163Open in IMG/M
3300031796|Ga0318576_10043822All Organisms → cellular organisms → Bacteria → Proteobacteria1914Open in IMG/M
3300031797|Ga0318550_10280456All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Malikia → Malikia spinosa808Open in IMG/M
3300031831|Ga0318564_10108761All Organisms → cellular organisms → Bacteria1232Open in IMG/M
3300031845|Ga0318511_10563486All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium529Open in IMG/M
3300031859|Ga0318527_10046485Not Available1677Open in IMG/M
3300031893|Ga0318536_10594657All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium553Open in IMG/M
3300031896|Ga0318551_10151824All Organisms → cellular organisms → Bacteria1264Open in IMG/M
3300031908|Ga0310900_10531186Not Available919Open in IMG/M
3300031910|Ga0306923_10133589All Organisms → cellular organisms → Bacteria2824Open in IMG/M
3300031954|Ga0306926_10937264Not Available1034Open in IMG/M
3300032043|Ga0318556_10724040All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium517Open in IMG/M
3300032076|Ga0306924_10599616All Organisms → cellular organisms → Bacteria → Proteobacteria1246Open in IMG/M
3300033289|Ga0310914_11625845All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria550Open in IMG/M
3300033290|Ga0318519_10081383All Organisms → cellular organisms → Bacteria1705Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil24.37%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil13.45%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil5.04%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil5.04%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil5.04%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere4.20%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil3.36%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil3.36%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil3.36%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil2.52%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil2.52%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere2.52%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere2.52%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.68%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.68%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere1.68%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere1.68%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere1.68%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere1.68%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.84%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil0.84%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil0.84%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.84%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil0.84%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere0.84%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.84%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.84%
Populus EndosphereHost-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere0.84%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere0.84%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.84%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.84%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.84%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.84%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere0.84%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000787Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300001661Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)EnvironmentalOpen in IMG/M
3300001867Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)EnvironmentalOpen in IMG/M
3300002075Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4Host-AssociatedOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300004157Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2EnvironmentalOpen in IMG/M
3300005167Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121EnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005339Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaGHost-AssociatedOpen in IMG/M
3300005356Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaGHost-AssociatedOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005466Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaGEnvironmentalOpen in IMG/M
3300005518Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaGEnvironmentalOpen in IMG/M
3300005713Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005840Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2Host-AssociatedOpen in IMG/M
3300006028Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaGEnvironmentalOpen in IMG/M
3300006042Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3Host-AssociatedOpen in IMG/M
3300006358Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2Host-AssociatedOpen in IMG/M
3300006604Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMB (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006903Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300006953Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009545Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaGHost-AssociatedOpen in IMG/M
3300009792Tropical forest soil microbial communities from Panama - MetaG Plot_12EnvironmentalOpen in IMG/M
3300010043Tropical forest soil microbial communities from Panama - MetaG Plot_26EnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010396Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300012198Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012356Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012901Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S119-311C-1EnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012984Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MGEnvironmentalOpen in IMG/M
3300014497Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaGHost-AssociatedOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300018067Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coexEnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300021086Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300021363Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c2EnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300025903Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025929Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025933Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025934Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025936Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025944Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026542Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)EnvironmentalOpen in IMG/M
3300027388Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300027616Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027646Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio (SPAdes)EnvironmentalOpen in IMG/M
3300027669Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027681Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027748Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)EnvironmentalOpen in IMG/M
3300027882Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027907Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300028379Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300028717Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_158EnvironmentalOpen in IMG/M
3300028718Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194EnvironmentalOpen in IMG/M
3300028720Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357EnvironmentalOpen in IMG/M
3300028791Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144EnvironmentalOpen in IMG/M
3300028793Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159EnvironmentalOpen in IMG/M
3300028811Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149EnvironmentalOpen in IMG/M
3300028828Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202EnvironmentalOpen in IMG/M
3300028876Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140EnvironmentalOpen in IMG/M
3300028880Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181EnvironmentalOpen in IMG/M
3300030997Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-3B (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300031081Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_159 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031199Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 7_SEnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031366Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 25_SEnvironmentalOpen in IMG/M
3300031446Fir Summer Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031474Fir Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031546Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23EnvironmentalOpen in IMG/M
3300031564Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21EnvironmentalOpen in IMG/M
3300031573Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111EnvironmentalOpen in IMG/M
3300031680Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22EnvironmentalOpen in IMG/M
3300031719Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)EnvironmentalOpen in IMG/M
3300031723Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23EnvironmentalOpen in IMG/M
3300031724Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20EnvironmentalOpen in IMG/M
3300031748Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22EnvironmentalOpen in IMG/M
3300031751Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24EnvironmentalOpen in IMG/M
3300031768Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22EnvironmentalOpen in IMG/M
3300031770Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17EnvironmentalOpen in IMG/M
3300031771Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19EnvironmentalOpen in IMG/M
3300031778Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24EnvironmentalOpen in IMG/M
3300031779Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22EnvironmentalOpen in IMG/M
3300031796Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24EnvironmentalOpen in IMG/M
3300031797Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23EnvironmentalOpen in IMG/M
3300031831Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20EnvironmentalOpen in IMG/M
3300031845Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18EnvironmentalOpen in IMG/M
3300031859Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25EnvironmentalOpen in IMG/M
3300031893Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28EnvironmentalOpen in IMG/M
3300031896Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19EnvironmentalOpen in IMG/M
3300031908Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1EnvironmentalOpen in IMG/M
3300031910Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)EnvironmentalOpen in IMG/M
3300031954Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)EnvironmentalOpen in IMG/M
3300032035Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170EnvironmentalOpen in IMG/M
3300032043Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24EnvironmentalOpen in IMG/M
3300032076Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)EnvironmentalOpen in IMG/M
3300033289Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108EnvironmentalOpen in IMG/M
3300033290Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI11643J11755_1133278023300000787SoilMPSAAYFRRQADICLRLAVISSDEEVSNRLIMMAREYAAKGAALTRQSGVDALPADDRPVPA
JGI12053J15887_1000036323300001661Forest SoilMPSSAYFRRQADICLRLSLIASDEEVSSRLITMSREYLAKSDALAGDDAGPPPHGPRAGILDA*
JGI12627J18819_1027181123300001867Forest SoilMPSAAYFRRQADICLRLSLIASDEEVSNRLIIMSREYAAKADVLKEGAADPP
JGI24738J21930_1000939733300002075Corn RhizosphereMPSSAYFRRQADICLRLSLIASDEEVSSRLIKMSREYLAKGDALAGGEADAGPSLPDHEPGSPSR
Ga0062593_10348724223300004114SoilMPSSAYFRRQADICLRLSLIASDEEVSNRLIRMSREYLAKGDALAGEEADAGPPL
Ga0062589_10203018923300004156SoilMPSSAYFRRQADICLRLSLIASDEEVSNRLIKMSREYLAKGDALAGAEADAGPPLPDTEPGSSSRE
Ga0062590_10120392023300004157SoilMPSSAYFRRQADICLRLSLIASDEEVSSRLIKMSREYLAKGDALAGGEADAGPSL
Ga0066672_1055502413300005167SoilMPSAAYFRRQADICLRLSLISSDGEVSNRLIIMAKEYATKADALEEAAADPRPA
Ga0066388_10651884613300005332Tropical Forest SoilMPSAAYFRRQADICLRLSLISSDQEVSNRLIIMAREYAAKADALQEAPADAPPAA
Ga0070660_10044036323300005339Corn RhizosphereMPSSAYFRRQADICLRLSLIASDEEVSSRLIKMSREYLAKGDALA
Ga0070674_10169958723300005356Miscanthus RhizosphereMPSSAYFRRQADICLRLSLIASDEEVSNRLIKMSREYLAKGDALAGREADAGPPLPDHEPGS
Ga0070705_10048626423300005440Corn, Switchgrass And Miscanthus RhizosphereMPSSAYFRRQADICLRLSLIASDEEVSSRLIKMSREYLAKGDALAGGEADAGPPL
Ga0070685_1005403433300005466Switchgrass RhizosphereMPSSAYFRRQADICLRLSLIASDEEVSSRLIKMSREYLAKGDALAGGEADAGP
Ga0070699_10177666623300005518Corn, Switchgrass And Miscanthus RhizosphereMPSAAYFRRQADICLRLSLISSDGEVSNRLIIMAKEYATKADALEEAAAGPPPAGVPDLA
Ga0066905_10209996613300005713Tropical Forest SoilMPSAAYFRRQADICLRLSLISSDQEVSNRLIIMAREYAAKADALQEAPAD
Ga0066903_10855631913300005764Tropical Forest SoilMASPAYFRRQADICLRLSLISSDGEVSNRLIIMAREYAAKADALEETAA
Ga0068870_1005140213300005840Miscanthus RhizosphereMPSSAYFRRQADICLRLSLIASDEEVSSRLIKMSREYLAKGDALAGGEADAGPSLPDH
Ga0070717_1012559433300006028Corn, Switchgrass And Miscanthus RhizosphereMPSAAYFRRQADICLRLSLISSDGEVSNRLIIMAKEYATKADALEEAAAD
Ga0075368_1008905123300006042Populus EndosphereMPSSAYFRRQADICLRLSLIASDEEVSNRLIKMSREYLAKGDALAGGEADAGPPLPD
Ga0068871_10013701733300006358Miscanthus RhizosphereMPSSAYFRRQADICLRLSLIASDEEVSSRLIKMSREYLAKGDALAGGEADAGPP
Ga0074060_1000790023300006604SoilMPSSAYFRRQADICLRLSLIASDEEVSSRLIKMSREYLAKGDALAG
Ga0075426_1031620113300006903Populus RhizosphereMPSSAYFRRQADVCLRLALLASDDEVSNRLIMMAREYTAKGAALARQS
Ga0075424_10253917613300006904Populus RhizosphereMPNPEYFRRQADICLRLSLIASDDEVSNRLITMARSYMAKGDALEREGVG
Ga0074063_1012306123300006953SoilMPSSAYFRRQADICLRLSLIASDEEVSNRLIKMSREYLAKGDALAGGEADAGPP
Ga0099827_1136825923300009090Vadose Zone SoilMPSAAYFRRQADICLRLSLIASDEEVSNRLIIMAREYAVKADVFIEEAATT
Ga0111539_1294516523300009094Populus RhizosphereMPSAAYFRRQADICLRLAVIASDEEVSNRLIMMAREYTAKGAALTRQSGAGAPPGADPPAPT
Ga0075423_1033397213300009162Populus RhizosphereMPSAAYFRRQADICLRLSLITSDDPTSARLVTMAKEYLATSEALEKQSEASDGWSPWP*
Ga0105237_1010374333300009545Corn RhizosphereMPSSAYFRRQADICLRLSLIASDEEVSSRLIKMSREYLAKGDALAGGEADAGPPLPDHEPGSPSRA
Ga0126374_1008421643300009792Tropical Forest SoilMPSAAYFRRQADICLRLSLISSDGEVSNRLIIMAREYAAKADALEETAADLPSADRTHRRMSGGTMRR*
Ga0126380_1078875613300010043Tropical Forest SoilMPSAAYFRQQADICLRLSLISSDGEVSNRLIIMAREYAAKADALEEAP
Ga0126380_1223690123300010043Tropical Forest SoilMPNPEYFRRQADICLRLSLIASDDEVLNRLIAMARSYTAKGDALERDAPAEGQ
Ga0126378_1194890223300010361Tropical Forest SoilMPSAAYFHRQADICLRLALIASDEEVSNRLILMAREYTAKGAALARQSGGDAPPGAHPPASRET
Ga0134126_1068619423300010396Terrestrial SoilMPSSAYFRRQADICLRLSLIASDEEVSNRLIRMSREYLAKGDALAGEEADAGPPLPDHEP
Ga0134127_1012243533300010399Terrestrial SoilMPSSAYFRRQADICLRLALIASDDEVSNRLITMSREYMTKSDALAREADTDRPA
Ga0137364_1046994823300012198Vadose Zone SoilMPSAAYFRRQADICLRLALIASDEEVSNRLIMMVREYTTKGDALAGQSGVDPPP
Ga0150985_10170544413300012212Avena Fatua RhizosphereAYFRRQADICLRLSLIASDEEVSNRLIKMSREYLAKGDALAGGEADAGPLLPDHEPGIAVARDRT*
Ga0137371_1110592613300012356Vadose Zone SoilMPSVAYFRRQADICLRLALIASDEEVSNRLIIMAQEYTAKGNALAKQAGADAS
Ga0150984_10081422223300012469Avena Fatua RhizosphereVSAMPSNAYFRRQADICLRLSLIASDEEVSNRLIKMSREYLAKGDALAGGEADAGPLLPDHEPGIAVARDRT*
Ga0150984_10777754513300012469Avena Fatua RhizosphereMPSTEYFRRQSDICLRLSMIASSDEVANRLIAMAQDYHVKADALEAQSTETMPT*
Ga0150984_11463643423300012469Avena Fatua RhizosphereMPSTEYFRRQSDICLRLAQIASSEEVATRLVAMAQDYTDRADEIEAE
Ga0157288_1003583813300012901SoilMPSSAYFRRQADICLRLALIASDDEVSNRLITMSREYMTKSDALAREADTDRPALDR
Ga0157288_1031413423300012901SoilMPSSAYFRRQADICLRLSLIASDEEVSSRLIKMSREYLAKGDALAGGEADAGPPLPDHEPGSPSR
Ga0137359_1168419113300012923Vadose Zone SoilMPSAAYFRRQADICLRLALIASDEEVSNRLIMMAREYTVKGDALAGQSGAGSAARR*
Ga0164309_1165092113300012984SoilMPSAAYFRRQADICLRLAVIASDEEVSNRLIMMAREYTAKCAALTRQSGVD
Ga0182008_1048399423300014497RhizosphereMPSSTYFRRQADICLRLALIASDDEVSNRLITMSREYMTKSDALAREAD
Ga0157376_1062237213300014969Miscanthus RhizosphereMPSAAYFRRQADICLRLSLVTSDDATSARLVTMAKEYLATSEALDKQPETGPSDLAD
Ga0132258_1037693533300015371Arabidopsis RhizosphereMPSSAYFRRQADVCLRLALLASDDEVSNRLIMMAREYTAKGAALARQSGGDAAPGAYPPHLARPKTRRCRR*
Ga0132258_1089073443300015371Arabidopsis RhizosphereMPSSAYFYRQADVCLRLALLASDEEVSNRLIMMAREYTAKGAALARQSGG
Ga0184611_133939723300018067Groundwater SedimentMPSSAYFRRQADICLRLSLIASDEEVSNRLITMSREYLAKSDALAGEA
Ga0066667_1228160123300018433Grasslands SoilMPSVAYFRRQADICFRLALIASDEEVSNRLIIMAQEYTDRAEKLNEDNELD
Ga0179596_1071422713300021086Vadose Zone SoilMPSAAYFRRQADICLRLSLISSDGEVSNRLIIMAKEYATKADALEEAAADPPPAGVPDLA
Ga0193699_1049365723300021363SoilPSSAYFRRQADICLRLSLIASDEEVSSRLITMSREYLAKSDALAGDDAGPPPHGPRAGILDA
Ga0126371_1287239323300021560Tropical Forest SoilMPSAAYFRRQADICLRLSLISSDGEVSNRLIIMAREYAAKADALEE
Ga0126371_1359723913300021560Tropical Forest SoilMPSAAYFRRQADICLRLSLISSDAEVSNRLIIMAREYVAKADAMREAAADPSPAADRTA
Ga0207680_1132952823300025903Switchgrass RhizosphereMPSSTYFRRQADICLRLALIASDDEVSNRLITMSREYMTKSDALAREADT
Ga0207664_1049749523300025929Agricultural SoilMPSAAYFRRQADICLRLSLISSDGEVSNRLIIMAKEYATKADALEEAAADPPPAGKRTA
Ga0207706_1087106023300025933Corn RhizosphereMPSAAYFRRQADICLRLAVIASDEEVSNRLIMMAREYTAKCAALTRQSGVDAL
Ga0207686_1051984723300025934Miscanthus RhizosphereMPSSAYFRRQADICLRLSLIASDEEVSSRLIKMSREYLAKGD
Ga0207670_1025384513300025936Switchgrass RhizosphereMPSSAYFRRQADICLRLSLIASDEEVSSRLIKMSREYLAKGDALAGGEADAGRPL
Ga0207661_1194931313300025944Corn RhizosphereMPSSAYFRRQADICLRLSLIASDEEVSNRLIKMSREYLAKGDALAGG
Ga0209805_140783423300026542SoilMPSAAYFRRQADICLRLSLISSDGEVSNRLIIMAKEYATKADA
Ga0208995_102056723300027388Forest SoilMPSSAYFRRQADICLRLSLIASDEEVSSRLITMSREYLAKSDALAGDDAGPPPHGPRAGILDA
Ga0209106_101050513300027616Forest SoilMPSAEYFRRQSDICLRLSLISSSEEVANRLIVMARDYQAKVDALEAES
Ga0209466_101430013300027646Tropical Forest SoilMPSAAYFRRQADICLRLSLISSDEEVSNRLIIMAREYAAKADVLATEAAA
Ga0208981_100894243300027669Forest SoilAMPSSAYFRRQADICLRLSLIASDEEVSSRLITMSREYLAKSDALAGDDAGPPPHGPRAGILDA
Ga0208991_110146623300027681Forest SoilMPSSAYFRRQADICLRLSLIASDEEVSSRLITMSREYLAKSDALAGDDAGP
Ga0209689_101321413300027748SoilMPSAAYFRRQADICLRLSLISSDGEVSNRLIIMAKEYATKADALEEAAADPPPADWD
Ga0209590_1074152913300027882Vadose Zone SoilMPSAAYFRRQADVCLRLSLIASDHEVSSRLIIMAREYMAMGEALEKGPGPSALPSQEG
Ga0207428_1099415313300027907Populus RhizosphereMPSSAYFRRQADICLRLSLIASDEEVSSRLIKMSREYLAKGDALAGGEADAGPPLPDHEP
Ga0268266_1002732613300028379Switchgrass RhizosphereMPSSAYFRRQADICLRLSLIASDEEVSSRLIKMSREYLAKGDALAGGEADAGRHLP
Ga0307298_1000936413300028717SoilMPSTAYFRLQANVCLRLSLIASDEEVSSRLIVMAQEYNAKAEALETDTRSPLA
Ga0307307_1020786013300028718SoilMPSAAYFRRQADICLRLAVIASDEEVSNRLIMMAREYTAKGAALTRQSGV
Ga0307317_1027450413300028720SoilMPSTAYFRLQANVCLRLSLIASDEEVSSRLIVMAQEYNAKA
Ga0307290_1020911013300028791SoilMPSTEYFRRQADICLRLSMIASSEEVANRLIAMAQDYTGRADEIEADS
Ga0307299_1001404813300028793SoilMPSSAYFRRQADICLRLSLIASDEEVSNRLITMSREYLAKSDALAGEDAAGPRGPWAGIAGR
Ga0307292_1038989323300028811SoilMPSSAYFRRQADICLRLSLIASDEEVSNRLIKMSREYLAKGDALAGA
Ga0307312_1068277113300028828SoilMPSTAYFRLQAKVCLRLSLIASDEEVSSRLIVMAQEYNAKAEALETD
Ga0307286_1020248223300028876SoilMPSSAYFRRQADICLRLSLIASDEEVSNRLIKMSREYLAKGDALAGGEADAGPPLPDHEPGS
Ga0307300_1015545113300028880SoilMPSSAYFRRQADICLRLSLIASDEEVSNRLIKMSREYLAKGDALAGGEADAGPPLPDHEPGSPSHQI
Ga0073997_1225164013300030997SoilQADICLRLSLIASDEEVSSRLITMSREYLAKSDALAGDDAGPPPHGPRAGILDA
Ga0308185_102925713300031081SoilMPSTEYFRRQSDICLRLSLIASDDEVASRLIVMAQEYKAKADALAAESS
Ga0307495_1015013923300031199SoilMPSSAYFRRQADICLRLSLIASDEEVSSRLIKMSREYLAKGDALAVGEADAGRHLPDHESES
Ga0170824_10887442213300031231Forest SoilMPSSAYFRRQADICLRLSLIASDEEVSNRLIIMSREYLAKSHALAGEADTQPAPEDH
Ga0307506_1001671623300031366SoilMPSSAYFRRQADICLRLSLIASDEEVSSRLIKMSREYLAKGDALAGGEADA
Ga0170820_1744293723300031446Forest SoilMPSSAYFRRQADICLRLSLIASDEEVSNRLIIMSREYLAKSHALAGEADTQPA
Ga0170818_10738098823300031474Forest SoilMPSSAYFRRQADICLRLSLIASDEEVSSRLIIMSREYLAKSHALAGEADTQPAPEDH
Ga0318538_1068854013300031546SoilMPSAAYFRRQADICLRLSLIFSDEEVSNRLIIMAREYTAKADALKEAGADAPA
Ga0318573_1002072113300031564SoilMPSAAYFRRQADICLRLSLISSDQEVSNRLIIMAREYAAKADAM
Ga0318573_1007394413300031564SoilMPSAAYFRRQADICLSLIASDEEVSNRLIIMAREYAAKADAVKEPAADPPPA
Ga0310915_1128054413300031573SoilMPSAAYFRRQADICLRLSLIASDEEVSNRLIIMAREYATKADAIAIKEA
Ga0318574_1034161723300031680SoilMPSAAYFRRQADICLRLSLISSDGEVSNRLIIMAKEYATKADALEEAAADPPP
Ga0318574_1041746613300031680SoilMPSAAYFRRQADICLRLSLIASDEEVSNRLIIMAREYAAKADAVKEPAADPPPATDR
Ga0318574_1063782013300031680SoilMPSAAYFRRQADICLRLSLISSDQEVSNRLILMAREYAAKADVEE
Ga0306917_1017653613300031719SoilMPSAAYFRRQADICLRLSLISSDGEVSNRLIIMAREYVAKADAMKEAA
Ga0318493_1036221113300031723SoilMPSAAYFRRQADICLRLSLISSDQEVSNRLILMAREYAAKADVEEA
Ga0318500_1000701143300031724SoilMPSAAYFRRQADICLRLSLISSDQEVSNRLIIMAREYAAKADAMK
Ga0318500_1002790513300031724SoilMPSAAYFRRQADICLRLSLISSDGEVSNRLIIMAREYVAKADAMKEAATDPS
Ga0318492_1011614313300031748SoilMPSAAYFRRQADICLRLSLISSDQEVSNRLIIMAREYAAKADAMKEAATD
Ga0318494_1041319313300031751SoilMPSAAYFRRQADICLRLSLISSDQEVSNRLILMAREYAAKADVG
Ga0318509_1000595113300031768SoilMPSAAYFRRQADICLRLSLISSDQEVSNRLIIMAREYAAKADAMKE
Ga0318521_1000145683300031770SoilMPSAAYFRRQADICLRLSLISSDQEVSNRLIIMAREYAAKADVV
Ga0318546_1050170213300031771SoilMPSAAYFRRQADICLRLSLIASDEEVSNRLIIMAREYATKADAIAIKEADAAAE
Ga0318498_1003599333300031778SoilMPSAAYFRRQADICLRLSLISSDGEVSNRLIIMAREYVAKADAMKEAAKD
Ga0318566_1022089123300031779SoilMPSAAYFRRQADICLRLSLISSDQEVSNRLIIMAREYAAKAD
Ga0318576_1004382213300031796SoilMPSAAYFRRQADICLRLSLISSDGEVSNRLIIMAREYVAKADAMKEAAKDPSPA
Ga0318550_1028045623300031797SoilMPSAAYFRRQADICLRLSLISSHQEVSNRLILMAREYAAKADVEEAAAD
Ga0318564_1010876123300031831SoilMPSAAYFRRQADICLRLSLISSDQEVSNRLIIMAREYAAKADVVQEAATDPPPAAERTALPDV
Ga0318511_1056348623300031845SoilMPSAAYFRRQADICLRLSLISSDQEVSNRLIIMAREYGAKADAMKEAATDSP
Ga0318527_1004648513300031859SoilMPSAAYFRRQADICLRLSLISSDGEVSNRLIIMAREYVAKADAMKEAAKDPSPAADRTALPDVE
Ga0318536_1059465713300031893SoilMPSAAYFRRQADICLRLSLISSDGEVSNRLIIMAKEYATKADALEEATADPPPADRT
Ga0318551_1015182413300031896SoilMPSAAYFRRQADICLRLSLISSDQEVSNRLILMAREYAAKADVEEAAA
Ga0310900_1053118613300031908SoilMPSSAYFRRQADICLRLSLIASDEEVSSRLIKMSREYLAKGDALAVG
Ga0306923_1013358913300031910SoilMPSAAYFRRQADICLRLSLIFSDEEVSNRLIIMAREYTAKADALKEAGADAPAAAARTPLPDV
Ga0306926_1093726423300031954SoilMPSAAYFRRQADICLSLIASDEEVSNRLIIMAREYAAKADAVKEPAADPPPAT
Ga0310911_1044753913300032035SoilMPSPAYFLRQADICLRLSLIVSDEQVSNRLIAMAQEYKAKAAALEPEPESI
Ga0318556_1072404013300032043SoilMPSAAYFRRQADICLSLIASDEEVSNRLIIMAREYAAKADAVKEPAADPPPATDR
Ga0306924_1059961623300032076SoilMPSPAYFRRQADICLRLSLISSDGEVSNRLIIMAREYAAKADALEETAADLPSADRTHRRMSGGTMRR
Ga0310914_1162584513300033289SoilMPSAAYFRRQADICLRLSLIASDDSVSNRLITMARDYMATSEALERES
Ga0318519_1008138323300033290SoilMPSAAYFRRQADICLRLSLIASDEEVSNRLIIMAREYAAKADALGSGGRAAPRLSSHGIA

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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