NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F074905

Metagenome / Metatranscriptome Family F074905

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F074905
Family Type Metagenome / Metatranscriptome
Number of Sequences 119
Average Sequence Length 40 residues
Representative Sequence MADISLTNNTIYAQNINNFTGELFKVGGQRTPLLSAVGGL
Number of Associated Samples 104
Number of Associated Scaffolds 119

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 100.00 %
% of genes near scaffold ends (potentially truncated) 99.16 %
% of genes from short scaffolds (< 2000 bps) 85.71 %
Associated GOLD sequencing projects 103
AlphaFold2 3D model prediction Yes
3D model pTM-score0.18

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (81.513 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh
(23.529 % of family members)
Environment Ontology (ENVO) Unclassified
(61.345 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(94.118 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 0.00%    β-sheet: 17.65%    Coil/Unstructured: 82.35%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.18
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 119 Family Scaffolds
PF13489Methyltransf_23 1.68



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms94.96 %
UnclassifiedrootN/A5.04 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000115|DelMOSum2011_c10009271Not Available5325Open in IMG/M
3300000116|DelMOSpr2010_c10019370All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium3343Open in IMG/M
3300000116|DelMOSpr2010_c10170692All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium724Open in IMG/M
3300000116|DelMOSpr2010_c10175268All Organisms → cellular organisms → Bacteria709Open in IMG/M
3300000117|DelMOWin2010_c10089712All Organisms → cellular organisms → Bacteria1165Open in IMG/M
3300000117|DelMOWin2010_c10117814All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium935Open in IMG/M
3300000949|BBAY94_10163604All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium602Open in IMG/M
3300001450|JGI24006J15134_10005682Not Available6474Open in IMG/M
3300001450|JGI24006J15134_10019239All Organisms → Viruses → Predicted Viral3174Open in IMG/M
3300005239|Ga0073579_1235051All Organisms → cellular organisms → Bacteria864Open in IMG/M
3300005430|Ga0066849_10007543All Organisms → Viruses → Predicted Viral4418Open in IMG/M
3300006025|Ga0075474_10215150Not Available586Open in IMG/M
3300006403|Ga0075514_1945584All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium710Open in IMG/M
3300006571|Ga0075505_1004400All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium786Open in IMG/M
3300006737|Ga0098037_1221712All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium613Open in IMG/M
3300006802|Ga0070749_10036542All Organisms → Viruses → Predicted Viral3035Open in IMG/M
3300006920|Ga0070748_1182526All Organisms → cellular organisms → Bacteria772Open in IMG/M
3300006929|Ga0098036_1026181All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium1839Open in IMG/M
3300007144|Ga0101670_1083031All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium525Open in IMG/M
3300007215|Ga0079272_1121547All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium799Open in IMG/M
3300007215|Ga0079272_1211335All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium785Open in IMG/M
3300007236|Ga0075463_10293368All Organisms → cellular organisms → Bacteria521Open in IMG/M
3300007340|Ga0079241_1340909All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium795Open in IMG/M
3300007539|Ga0099849_1081711All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1306Open in IMG/M
3300007539|Ga0099849_1168362All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium839Open in IMG/M
3300007596|Ga0102802_1104065All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium580Open in IMG/M
3300009071|Ga0115566_10079967All Organisms → Viruses → Predicted Viral2137Open in IMG/M
3300009481|Ga0114932_10510396All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium707Open in IMG/M
3300009677|Ga0115104_10694987All Organisms → cellular organisms → Bacteria789Open in IMG/M
3300009679|Ga0115105_10591047All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium637Open in IMG/M
3300009679|Ga0115105_11280965All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium781Open in IMG/M
3300009739|Ga0123362_1083664All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium797Open in IMG/M
3300009790|Ga0115012_10764311All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium780Open in IMG/M
3300010149|Ga0098049_1258415All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium529Open in IMG/M
3300010296|Ga0129348_1225603All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium633Open in IMG/M
3300010318|Ga0136656_1116468All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium929Open in IMG/M
3300012520|Ga0129344_1034267All Organisms → cellular organisms → Bacteria775Open in IMG/M
3300012520|Ga0129344_1261358All Organisms → cellular organisms → Bacteria567Open in IMG/M
3300012525|Ga0129353_1307654All Organisms → cellular organisms → Bacteria765Open in IMG/M
3300012528|Ga0129352_10108259All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium799Open in IMG/M
3300012920|Ga0160423_10141268All Organisms → cellular organisms → Bacteria1692Open in IMG/M
3300012920|Ga0160423_10681831All Organisms → cellular organisms → Bacteria694Open in IMG/M
3300012963|Ga0129340_1241280All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium683Open in IMG/M
3300016732|Ga0182057_1454176All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium588Open in IMG/M
3300016733|Ga0182042_1110968All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium566Open in IMG/M
3300016735|Ga0182074_1210270All Organisms → cellular organisms → Bacteria738Open in IMG/M
3300016739|Ga0182076_1570601All Organisms → cellular organisms → Bacteria740Open in IMG/M
3300016741|Ga0182079_1249768All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium797Open in IMG/M
3300016741|Ga0182079_1458599All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium823Open in IMG/M
3300016743|Ga0182083_1650583All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium782Open in IMG/M
3300016747|Ga0182078_10950033All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium747Open in IMG/M
3300016762|Ga0182084_1120422All Organisms → cellular organisms → Bacteria714Open in IMG/M
3300016771|Ga0182082_1440952All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium727Open in IMG/M
3300017697|Ga0180120_10026623All Organisms → Viruses → Predicted Viral2689Open in IMG/M
3300017738|Ga0181428_1072649All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium803Open in IMG/M
3300017745|Ga0181427_1135776All Organisms → cellular organisms → Bacteria598Open in IMG/M
3300017759|Ga0181414_1069058All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium938Open in IMG/M
3300017760|Ga0181408_1094328Not Available781Open in IMG/M
3300017764|Ga0181385_1180172All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium638Open in IMG/M
3300017771|Ga0181425_1128054All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium809Open in IMG/M
3300017772|Ga0181430_1170869All Organisms → cellular organisms → Bacteria627Open in IMG/M
3300017818|Ga0181565_10752051All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium615Open in IMG/M
3300017949|Ga0181584_10395718All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium866Open in IMG/M
3300017952|Ga0181583_10656290All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium627Open in IMG/M
3300017956|Ga0181580_10620202All Organisms → cellular organisms → Bacteria695Open in IMG/M
3300017964|Ga0181589_10747294All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium610Open in IMG/M
3300017967|Ga0181590_10954935All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium561Open in IMG/M
3300017968|Ga0181587_10798427All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium589Open in IMG/M
3300018418|Ga0181567_10657894All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium672Open in IMG/M
3300018428|Ga0181568_10002827All Organisms → cellular organisms → Bacteria15775Open in IMG/M
3300019262|Ga0182066_1090573All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium619Open in IMG/M
3300019280|Ga0182068_1157204All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium783Open in IMG/M
3300019280|Ga0182068_1604372All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium686Open in IMG/M
3300019281|Ga0182077_1070971All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium515Open in IMG/M
3300019282|Ga0182075_1054352All Organisms → cellular organisms → Bacteria768Open in IMG/M
3300019283|Ga0182058_1550424All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium683Open in IMG/M
3300019283|Ga0182058_1750549All Organisms → cellular organisms → Bacteria761Open in IMG/M
3300019937|Ga0194022_1010592All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium1199Open in IMG/M
3300020299|Ga0211615_1029838All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium796Open in IMG/M
3300020371|Ga0211500_1042778All Organisms → Viruses → Predicted Viral1422Open in IMG/M
3300020409|Ga0211472_10011958All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium3380Open in IMG/M
3300020416|Ga0211644_10058918All Organisms → Viruses → Predicted Viral1554Open in IMG/M
3300020432|Ga0211556_10205430All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium902Open in IMG/M
3300021364|Ga0213859_10461828All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium555Open in IMG/M
3300021379|Ga0213864_10568155All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium563Open in IMG/M
3300021959|Ga0222716_10585081All Organisms → cellular organisms → Bacteria612Open in IMG/M
3300021960|Ga0222715_10705522All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium508Open in IMG/M
3300021961|Ga0222714_10589594All Organisms → cellular organisms → Bacteria557Open in IMG/M
3300022065|Ga0212024_1084950All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium563Open in IMG/M
3300022068|Ga0212021_1126273All Organisms → cellular organisms → Bacteria524Open in IMG/M
3300022159|Ga0196893_1027290All Organisms → cellular organisms → Bacteria534Open in IMG/M
3300022925|Ga0255773_10215699All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium852Open in IMG/M
3300023116|Ga0255751_10029540All Organisms → Viruses → Predicted Viral4045Open in IMG/M
(restricted) 3300023210|Ga0233412_10043850All Organisms → Viruses → Predicted Viral1810Open in IMG/M
3300025070|Ga0208667_1036926All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium843Open in IMG/M
3300025071|Ga0207896_1054080All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium652Open in IMG/M
3300025102|Ga0208666_1088136All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium786Open in IMG/M
3300025108|Ga0208793_1146904All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium626Open in IMG/M
3300025120|Ga0209535_1025718All Organisms → Viruses → Predicted Viral2875Open in IMG/M
3300025120|Ga0209535_1175693All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium638Open in IMG/M
3300025127|Ga0209348_1221648All Organisms → cellular organisms → Bacteria517Open in IMG/M
3300025131|Ga0209128_1033816All Organisms → Viruses → Predicted Viral2041Open in IMG/M
3300025138|Ga0209634_1033032All Organisms → Viruses → Predicted Viral2716Open in IMG/M
3300025151|Ga0209645_1034576All Organisms → Viruses → Predicted Viral1842Open in IMG/M
3300025751|Ga0208150_1099126Not Available953Open in IMG/M
3300025769|Ga0208767_1029900All Organisms → Viruses → Predicted Viral2834Open in IMG/M
3300025803|Ga0208425_1079911All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium782Open in IMG/M
3300025803|Ga0208425_1114812All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium619Open in IMG/M
3300025818|Ga0208542_1112107All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium774Open in IMG/M
3300025828|Ga0208547_1193816All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium551Open in IMG/M
3300025890|Ga0209631_10225659All Organisms → cellular organisms → Bacteria948Open in IMG/M
3300026447|Ga0247607_1043628All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium778Open in IMG/M
3300028196|Ga0257114_1255313All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium623Open in IMG/M
3300028335|Ga0247566_1015461All Organisms → Viruses → Predicted Viral1187Open in IMG/M
3300029302|Ga0135227_1043411All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium536Open in IMG/M
3300029318|Ga0185543_1036422All Organisms → cellular organisms → Bacteria1091Open in IMG/M
3300032277|Ga0316202_10098597Not Available1354Open in IMG/M
3300034374|Ga0348335_001570All Organisms → cellular organisms → Bacteria16681Open in IMG/M
3300034374|Ga0348335_031931All Organisms → Viruses → Predicted Viral2300Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Salt MarshEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh23.53%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous20.17%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine18.49%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine7.56%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater5.88%
MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine5.04%
SeawaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Seawater3.36%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient2.52%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water2.52%
Surface SeawaterEnvironmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater1.68%
FreshwaterEnvironmental → Aquatic → Freshwater → River → Unclassified → Freshwater0.84%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine0.84%
MarineEnvironmental → Aquatic → Marine → Inlet → Unclassified → Marine0.84%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater0.84%
Microbial MatEnvironmental → Aquatic → Marine → Coastal → Sediment → Microbial Mat0.84%
Pelagic MarineEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine0.84%
Pelagic MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine0.84%
Marine HarborEnvironmental → Aquatic → Marine → Harbor → Unclassified → Marine Harbor0.84%
Deep SubsurfaceEnvironmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface0.84%
Volcanic Co2 SeepEnvironmental → Aquatic → Marine → Volcanic → Unclassified → Volcanic Co2 Seep0.84%
Macroalgal SurfaceHost-Associated → Algae → Green Algae → Ectosymbionts → Unclassified → Macroalgal Surface0.84%

Visualization
Powered by ApexCharts



Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000115Marine microbial communities from Delaware Coast, sample from Delaware MO Summer July 2011EnvironmentalOpen in IMG/M
3300000116Marine microbial communities from Delaware Coast, sample from Delaware MO Spring March 2010EnvironmentalOpen in IMG/M
3300000117Marine microbial communities from Delaware Coast, sample from Delaware MO Winter December 2010EnvironmentalOpen in IMG/M
3300000949Macroalgal surface ecosystem from Botany Bay, Sydney, Australia - BBAY94Host-AssociatedOpen in IMG/M
3300001450Marine viral communities from the Pacific Ocean - LP-53EnvironmentalOpen in IMG/M
3300005239Environmental Genome Shotgun Sequencing: Ocean Microbial Populations from the Gulf of MaineEnvironmentalOpen in IMG/M
3300005430Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV69EnvironmentalOpen in IMG/M
3300006025Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_DNAEnvironmentalOpen in IMG/M
3300006403Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_<0.8_RNA1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006571Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_>0.8_RNA2 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006737Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaGEnvironmentalOpen in IMG/M
3300006802Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18EnvironmentalOpen in IMG/M
3300006920Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12EnvironmentalOpen in IMG/M
3300006929Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaGEnvironmentalOpen in IMG/M
3300007144Seawater microbiome, Papua New Guinea CO2 seep, Upa-Upasina 'control', waterEBic1EnvironmentalOpen in IMG/M
3300007215Seawater microbial communities from Saanich Inlet, British Columbia, Canada - KN S12 DCM_B metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300007236Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_>0.8_DNAEnvironmentalOpen in IMG/M
3300007340Seawater microbial communities from Saanich Inlet, British Columbia, Canada - KN S5 c16 DCM_A metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300007539Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaGEnvironmentalOpen in IMG/M
3300007596Marine microbial communities from the Southern Atlantic ocean - KN S19 DCM_B metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300009071Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405EnvironmentalOpen in IMG/M
3300009481Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 2SBTROV12_ACTIVE470 metaGEnvironmentalOpen in IMG/M
3300009677Marine eukaryotic communities from Pacific Ocean to study complex ecological interactions - CN13ID_70_C50_10m_0.8um Metatranscriptome (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300009679Marine eukaryotic communities from Pacific Ocean to study complex ecological interactions - CN13ID_155_C17_100m_0.8um Metatranscriptome (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300009739Marine microbial and viral communities from Louisana Shelf, Gulf of Mexico - GoM_2015_C6C_194_18m (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300009790Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT10 MetagenomeEnvironmentalOpen in IMG/M
3300010149Marine viral communities from the Subarctic Pacific Ocean - 13B_ETSP_OMZ_AT15268_CsCl metaGEnvironmentalOpen in IMG/M
3300010296Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.8_DNAEnvironmentalOpen in IMG/M
3300010318Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_15_0.8_DNAEnvironmentalOpen in IMG/M
3300012520Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_15_0.2_RNA2 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012525Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.2_RNA2 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012528Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.2_RNA1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012920Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St8 metaGEnvironmentalOpen in IMG/M
3300012963Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_15_0.8_RNA1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300016732Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 101403AT metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300016733Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 011501AT metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300016735Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 071406BT metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300016739Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 071408BT metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300016741Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 071410CT metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300016743Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 071413AT metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300016747Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 071409BT metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300016762Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 071413CT metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300016771Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 071412BT metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300017697Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.2_DNA (version 2)EnvironmentalOpen in IMG/M
3300017738Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 51 SPOT_SRF_2014-02-12EnvironmentalOpen in IMG/M
3300017745Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 50 SPOT_SRF_2014-01-15EnvironmentalOpen in IMG/M
3300017759Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 37 SPOT_SRF_2012-11-28EnvironmentalOpen in IMG/M
3300017760Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 31 SPOT_SRF_2012-02-16EnvironmentalOpen in IMG/M
3300017764Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 8 SPOT_SRF_2010-02-11EnvironmentalOpen in IMG/M
3300017771Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 48 SPOT_SRF_2013-11-13EnvironmentalOpen in IMG/M
3300017772Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 53 SPOT_SRF_2014-04-10EnvironmentalOpen in IMG/M
3300017818Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101401AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017949Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071406AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017952Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405CT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017956Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071403BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017964Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071410BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017967Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071411BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017968Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071409AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018418Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101403AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018428Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101404AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300019262Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 101412AT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019280Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 071401AT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019281Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 071409AT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019282Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 071407BT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019283Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 101404CT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019937Freshwater microbial communities from the Broadkill River, Lewes, Delaware, United States ? IW29Aug16_MGEnvironmentalOpen in IMG/M
3300020299Marine microbial communities from Tara Oceans - TARA_B100000214 (ERX555923-ERR599016)EnvironmentalOpen in IMG/M
3300020371Marine microbial communities from Tara Oceans - TARA_B100000003 (ERX555978-ERR598991)EnvironmentalOpen in IMG/M
3300020409Marine microbial communities from Tara Oceans - TARA_A100001403 (ERX555912-ERR599106)EnvironmentalOpen in IMG/M
3300020416Marine microbial communities from Tara Oceans - TARA_B100001109 (ERX556137-ERR599039)EnvironmentalOpen in IMG/M
3300020432Marine microbial communities from Tara Oceans - TARA_B100002052 (ERX556103-ERR599100)EnvironmentalOpen in IMG/M
3300021364Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO304EnvironmentalOpen in IMG/M
3300021379Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO247EnvironmentalOpen in IMG/M
3300021959Estuarine water microbial communities from San Francisco Bay, California, United States - C33_13DEnvironmentalOpen in IMG/M
3300021960Estuarine water microbial communities from San Francisco Bay, California, United States - C33_9DEnvironmentalOpen in IMG/M
3300021961Estuarine water microbial communities from San Francisco Bay, California, United States - C33_3DEnvironmentalOpen in IMG/M
3300022065Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (v2)EnvironmentalOpen in IMG/M
3300022068Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 (v2)EnvironmentalOpen in IMG/M
3300022159Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28 (v3)EnvironmentalOpen in IMG/M
3300022925Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011502XT metaGEnvironmentalOpen in IMG/M
3300023116Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412BT metaGEnvironmentalOpen in IMG/M
3300023210 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_anoxic_4_MGEnvironmentalOpen in IMG/M
3300025070Marine viral communities from the Subarctic Pacific Ocean - 11B_ETSP_OMZ_AT15265_CsCl metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025071Marine viral communities from the Pacific Ocean - LP-36 (SPAdes)EnvironmentalOpen in IMG/M
3300025102Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025108Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025120Marine viral communities from the Pacific Ocean - LP-28 (SPAdes)EnvironmentalOpen in IMG/M
3300025127Marine viral communities from the Pacific Ocean - ETNP_2_30 (SPAdes)EnvironmentalOpen in IMG/M
3300025131Marine viral communities from the Pacific Ocean - ETNP_6_100 (SPAdes)EnvironmentalOpen in IMG/M
3300025138Marine viral communities from the Pacific Ocean - LP-40 (SPAdes)EnvironmentalOpen in IMG/M
3300025151Marine viral communities from the Pacific Ocean - ETNP_6_30 (SPAdes)EnvironmentalOpen in IMG/M
3300025751Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025769Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 (SPAdes)EnvironmentalOpen in IMG/M
3300025803Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025818Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025828Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025890Pelagic Microbial community sample from North Sea - COGITO 998_met_08 (SPAdes)EnvironmentalOpen in IMG/M
3300026447Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 125R_r (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300028196Marine microbial communities from Saanich Inlet, British Columbia, Canada - SI112_10mEnvironmentalOpen in IMG/M
3300028335Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 14R (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300029302Marine harbor viral communities from the Indian Ocean - SRB3EnvironmentalOpen in IMG/M
3300029318Marine giant viral communities collected during Tara Oceans survey from station TARA_038 - TARA_Y100000289EnvironmentalOpen in IMG/M
3300032277Microbial mat bacterial communities from mineral coupon in-situ incubated in ocean water Damariscotta River, Maine, United States - 3-month pyrrhotiteEnvironmentalOpen in IMG/M
3300034374Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31 (v4)EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
DelMOSum2011_1000927113300000115MarineMGAITTPDPIYASDINNFQGELFKVGGQRTPFLSAM
DelMOSpr2010_1001937013300000116MarineMAAITLTGNAIYSQNINNFSGELFRVGGQRTPFLSATGGLN
DelMOSpr2010_1017069213300000116MarineMGAISLTNNSIYSQKINNFSGELFRVGGQRTPFLSATGGLNGG
DelMOSpr2010_1017526813300000116MarineMGAITTPDPIYTSDINNFQGELFRVGGQRTPFLSAMGGLSGGGK
DelMOWin2010_1008971243300000117MarineMGAIATPDPIYASDINNFQGELFKVGGQRTPFLSAMGGL
DelMOWin2010_1011781433300000117MarineMAAITLTGNAIYSQNINNFSGELFRVGGQRTPFLSATG
BBAY94_1016360413300000949Macroalgal SurfaceMAEITLTGDAIYSQNINNFSGELFRVGGQRTPFLSATGGLNG
JGI24006J15134_1000568213300001450MarineMGAITTPDPIYASDINNFQGELFKVGGQRTPFLSAMGGLT
JGI24006J15134_1001923943300001450MarineMGAISLTNSSIYAQNINNFTGELFKVGGQRTPFLSAVGGLNGGTAI
Ga0073579_123505113300005239MarineMGAITTPDPIYASDINNFQGELFKVGGQRTPFLSAMGGLTGGGKVI
Ga0066849_1000754353300005430MarineMASISLTNSAIYSQKINNFTGELFRVGGQRTPFLSAIGGLNGG
Ga0075474_1021515023300006025AqueousMGPITTPDPIYASDINNFQGELFKVGGQRTPFLSAM
Ga0075514_194558423300006403AqueousMAAISLTGNAIYSQNINNFSGELFRVGGQRTPFLSATG
Ga0075505_100440033300006571AqueousMAGITLTGNAIYSQNINNFSGELFRVGGQRTPFLSATG
Ga0098037_122171223300006737MarineMANISLTNSTIYAQNINNFAGELFKVGGQRTPLLSSVGGLNGGKV
Ga0070749_1003654243300006802AqueousMAGITLTNNAIYSQKINNFSGELFRVGGQRTPFLSATGGLNG
Ga0070748_118252633300006920AqueousMGPITTPDPIYASDINNFQGELFKVGGQRTPFLSAMG
Ga0098036_102618113300006929MarineMANISLTNSTIDAQNINNFAGELFKVGGQRTPLLSSVGGLNGGK
Ga0101670_108303123300007144Volcanic Co2 SeepMAAITLTGDTLYSQKINNFAGELFRVGGQRTPFLSAT
Ga0079272_112154713300007215MarineMADISLTNNTIYAQNINNFTGELFKVGGQRTPLLSAVGGLNG
Ga0079272_121133523300007215MarineMANISLTGDTLYSQKINNFSGELFRVGGQRTPFLSAT
Ga0075463_1029336823300007236AqueousMGAISLTNSSIYAQKINNFSGELFKVGGQRTPFLSATGG
Ga0079241_134090923300007340MarineMASISLTNSTIYSQNINNFTGELFRVGGQRTPFLSAIGGLN
Ga0099849_108171113300007539AqueousMASISLTGNTIYSQNINNFSGELFRVGGQRTPFLSATGG
Ga0099849_116836223300007539AqueousMANISLTNNTIYAQNINNFTGELFKVGGQRTPLLSSVGGLNGGKVL
Ga0102802_110406523300007596MarineMAAITLTGDTLYSQKINNFTGELFRVGGQRTPFLSAT
Ga0115566_1007996743300009071Pelagic MarineMGAISLTNNSIYSQKINNFSGELFRVGGQRTPFLSATGGLNG
Ga0114932_1051039613300009481Deep SubsurfaceMADISLTNNTIYAQNINNFTGELFKVGGQRTPLLSAV
Ga0115104_1069498713300009677MarineMGAISLTNSSIYAHNINNFTGELFKVGGQRTPFLSATGGLNG
Ga0115105_1059104723300009679MarineMASISLTNSTIYSQNINNFTGELFRVGGQRTPFLSAIGGLNG
Ga0115105_1128096523300009679MarineMADISLTNSTIYAQNINNLTGELFKVGGQRTPLLSSVG
Ga0123362_108366413300009739MarineMAAISLTGNTIYSQNVNNFTGELFRVGGQRTPFLSAT
Ga0115012_1076431113300009790MarineMAAITLTGDTLYSQKINNFSGELFRVGGQRTPFLS
Ga0098049_125841523300010149MarineMAAITLTGDTLYSQKINNFTGELFRVGGQRTPFLSATGGLNGG
Ga0129348_122560323300010296Freshwater To Marine Saline GradientMANISGLSGSVPIYSQQINNFSGELFRVGGQRTPFLSATGGLNG
Ga0136656_111646813300010318Freshwater To Marine Saline GradientMANISLTNNTIYAQNINNFTGELFKVGGQRTPLLSSVGGLNGGKV
Ga0129344_103426713300012520AqueousMAAITTPDPIYSQDINNFQGELFRVGGQRTPFLSAMG
Ga0129344_126135823300012520AqueousMANISLTNSTIYAQNINNFTGELFKVGGQRTPLLSAV
Ga0129353_130765413300012525AqueousMANISLTNSTIYAQNINNFTGELFKVGGQRTPLLSAVGGL
Ga0129352_1010825923300012528AqueousMAGISLTGNTIYSQNVNNFSGELFRVGGQRTPFLSATGGLNG
Ga0160423_1014126813300012920Surface SeawaterMADISLTNSTIYAQNINNFTGELFKVGGQRTPLLSAV
Ga0160423_1068183113300012920Surface SeawaterMANISLTNSTIYAQNINNFTGELFKVGGQRTPLLSAVGG
Ga0129340_124128023300012963AqueousMANISLTNNTIYAQNINNFTGELFKVGGQRTPLLSSVGGLNGGK
Ga0182057_145417623300016732Salt MarshMAEITLTGNAIYSQNINNFSGELFRVGGQRTPFLSA
Ga0182042_111096823300016733Salt MarshMADISLTNNTIYAQNINNFTGELFKVGGQRTPLLSAVGGLNGGKVL
Ga0182074_121027013300016735Salt MarshMGAITTPDPIYSQDINNFQGELFRVGGQRTPFLSAI
Ga0182076_157060113300016739Salt MarshMAEITTPNPIYSQDINNFQGELFRVGGQRTPFLSAI
Ga0182079_124976813300016741Salt MarshMANISLTNNTIYAQNINNFTGELFKVGGQRTPLLSAVGGLN
Ga0182079_145859913300016741Salt MarshMAAISLTNNTIYSQNINNFQGELFRVGGQRTPMVSA
Ga0182083_165058313300016743Salt MarshMAGISLTGNTIYSQNINNFSGELFRVGGQRTPFLSA
Ga0182078_1095003313300016747Salt MarshMPQIQSGSLTNSTIYSQVINNFSGELFKVGGQRTPFL
Ga0182084_112042213300016762Salt MarshMASISLTNSTIYAQNINNFTGELFKVGGQRTPFTSAVGGISGGG
Ga0182082_144095213300016771Salt MarshMADISLTNNTIYAQNINNFTGELFKVGGQRTPFTSA
Ga0180120_1002662343300017697Freshwater To Marine Saline GradientMGAIATPDPIYASDINNFQGELFKVGGQRTPFLSAM
Ga0181428_107264913300017738SeawaterMAAITLTGDTLYSQKINNFSGELFRVGGQRTPFLSATGGLNGGKV
Ga0181427_113577613300017745SeawaterMGAISTPDPIYASDINNFQGELFKVGGQRTPFLSAMGGL
Ga0181414_106905813300017759SeawaterMAGISLTNDAIYSQKINNFSGELFRVGGQRTPFLS
Ga0181408_109432823300017760SeawaterMADISLTNSTIYAQNINNFTGELFKVGGQRTPLLSAVGGLNGGK
Ga0181385_118017223300017764SeawaterMGAISLTNSSIYAQNINNFTGELFKVGGQRTPLLSA
Ga0181425_112805423300017771SeawaterMGAISLTNSSIYAQNINNFTGELFKVGGQRTPFLSAVGGLNGGTA
Ga0181430_117086923300017772SeawaterMGAISLTNSSIYAQTINNFSGELFKVGGQRTPFLSAVGGL
Ga0181565_1075205123300017818Salt MarshMADISFTNNTIYAQNINNFTGELFKVGGQRTPLLSAVGGLNGGK
Ga0181584_1039571823300017949Salt MarshMASISLTNNAIYSQNINNFSGELFRVGGQRTPFLS
Ga0181583_1065629023300017952Salt MarshMAEISLTGNAIYSQNINNFSGELFRVGGQRTPFLSATGGLNGG
Ga0181580_1062020223300017956Salt MarshMANISLTNSTIYAQNINNFTGELFKVGGQRTPLLSAVGGLNGGKV
Ga0181589_1074729413300017964Salt MarshMAEISLTGNAIYSQNINNFSGELFRVGGQRTPFLSATG
Ga0181590_1095493523300017967Salt MarshMAAISLTNNTIYAQNINNFTGELFKVGGQRTPLLS
Ga0181587_1079842723300017968Salt MarshMAAISLTGNAIYSQNINNFSGELFRVGGQRTPFLSATGGLNG
Ga0181567_1065789423300018418Salt MarshMPQIQSGSLTNDTIYSQVINNFSGELFKVGGQRTPFLSAVGGL
Ga0181568_10002827113300018428Salt MarshMAEITLTGNAIYSQNINNFSGELFRVGGQRTPFLSATG
Ga0182066_109057323300019262Salt MarshMAEITLTGNAIYSQNINNFSGELFRVGGQRTPFLSATGGLNG
Ga0182068_115720423300019280Salt MarshMASISLTNNTIYAQNINNFTGELFKVGGQRTPLLSAVGGLNG
Ga0182068_160437223300019280Salt MarshMAEITLTGNAIYSQNINNFSGELFRVGGQRTPFLSATGGL
Ga0182077_107097113300019281Salt MarshMAAISLTNNTIYAQNINNFTGELFKVGGQRTPLLSSVGGLNG
Ga0182075_105435223300019282Salt MarshMASISLTNSTIYAQNINNFTGELFKVGGQRTPFTSAVGGISGGGKVIQ
Ga0182058_155042423300019283Salt MarshMADISLTNNTIYAQNINNFTGELFKVGGQRTPLLSAVG
Ga0182058_175054913300019283Salt MarshMADISLTNNTLYAQNINNFAGELFKVGGQRTPLLSAVGGLNG
Ga0194022_101059213300019937FreshwaterMANISLTNNTLYAQNINNFTGELFKVGGQRTPFTS
Ga0211615_102983813300020299MarineMASISLTNSTIYSQNINNFTGELFRVGGQRTPFLSAIGG
Ga0211500_104277833300020371MarineMANISLTNNTIYAQNINNFTGELFKVGGQRTPLLSAVGG
Ga0211472_1001195813300020409MarineMAEISLTNNTLYAQNINNFAGELFKVGGQRTPLLSAVGGLNGGKSI
Ga0211644_1005891813300020416MarineMGAISLTNNTIYAQNINNFTGELFKVGGQRTPLLTA
Ga0211556_1020543013300020432MarineMADISLTNNTIYAQNINNFTGELFKVGGQRTPLLSAVGGLNGGK
Ga0213859_1046182813300021364SeawaterMADISLTNNTIYAQNINNFTGELFKVGGQRTPLLSSVGGLNG
Ga0213864_1056815513300021379SeawaterMADISLTNNTIYAQNINNFTGELFKVGGQRTPLLSAVGGL
Ga0222716_1058508123300021959Estuarine WaterMADISLTNSTIYAQQINNFTGELFKVGGQRTPLLSAVGGL
Ga0222715_1070552213300021960Estuarine WaterMADISLTNSTIYAQNINNFTGELFKVGGQRTPLLSAVGGLNGGKTL
Ga0222714_1058959423300021961Estuarine WaterMGPITTPNPIYASDINNFQGELFKVGGQRTPFLSAMGGLTGGGK
Ga0212024_108495023300022065AqueousMAAISLTNSTIYAQNINNFAGELFKVGGQRTPLLSAA
Ga0212021_112627313300022068AqueousMANISLTNSTIYAQNINNFTGELFKVGGQRTPLLS
Ga0196893_102729023300022159AqueousMGPITTPDPIYASDINNFQGELFKVGGQRTPFLSAMGGLTGGGKVIQST
Ga0255773_1021569913300022925Salt MarshMASISLTNNTIYAQNINNFTGELFKVGGQRTPLLSAVGGLNGGKVL
Ga0255751_1002954053300023116Salt MarshMAEISLTGNAIYSQNINNFSGELFRVGGQRTPFLSATGGLNG
(restricted) Ga0233412_1004385013300023210SeawaterMGAITTPDPIYASDINNFQGELFKVGGQRTPFLSAMGGL
Ga0208667_103692623300025070MarineMAGISLTGNTIYSQNINNFSGELFRVGGQRTPFLSATGGLNG
Ga0207896_105408023300025071MarineMAAITLTNNSIYSQKINNFSGELFRVGGQRTPFLSATGGLNGG
Ga0208666_108813613300025102MarineMANISLTNSTIYAQNINNFAGELFKVGGQRTPLLSSVGGLNGG
Ga0208793_114690413300025108MarineMADISLTNNTIYAQNINNFTGELFKVGGQRTPLLS
Ga0209535_102571843300025120MarineMGAISLTNSSIYAQKINNFSGELFKVGGQRTPFLSAV
Ga0209535_117569313300025120MarineMGAISLTNSSIYAQNINNFTGELFKVGGQRTPFLS
Ga0209348_122164823300025127MarineMGPITTPDPIYASDINNFQGELFKVGGQRTPFLSAMGGLTG
Ga0209128_103381633300025131MarineMAAISLTNSTIYAQNINNFAGELFKVGGQRTPFLSAV
Ga0209634_103303213300025138MarineMGAISLTNSSIYAQTINNFSGELFKVGGQRTPFLSAVGG
Ga0209645_103457613300025151MarineMAAITLTGDTLYSQKINNFTGELFRVGGQRTPFLS
Ga0208150_109912613300025751AqueousMGPITTPDPIYASDINNFQGELFKVGGQRTPFLSA
Ga0208767_102990013300025769AqueousMASISLTGNAIYSQNINNFSGELFRVGGQRTPFLSATGG
Ga0208425_107991113300025803AqueousMASISLTGNAIYSQNINNFSGELFRVGGQRTPFLSATG
Ga0208425_111481223300025803AqueousMAAITLTGNAIYSQNINNFSGELFRVGGQRTPFLSATGG
Ga0208542_111210713300025818AqueousMAAITLTGNAIYSQNINNFSGELFRVGGQRTPFLSATGGLNGG
Ga0208547_119381623300025828AqueousMAGITLTNDAIYSQKINNFSGELFRVGGQRTPFLSATGGLNGG
Ga0209631_1022565913300025890Pelagic MarineMGPITTPDPIYASDINNFQGELFKVGGQRTPFLSAMGGLT
Ga0247607_104362833300026447SeawaterMAGISLTNDAIYSQKINNFSGELFRVGGQRTPFLSA
Ga0257114_125531323300028196MarineMAAITLTGDTLYSQKINNFSGELFRVGGQRTPFLSATG
Ga0247566_101546123300028335SeawaterMAAITLTGDTLYSQKINNFSGELFRVGGQRTPFLSATGG
Ga0135227_104341113300029302Marine HarborMASISLTNNTIYAQNINNFTGELFKVGGQRTPLLSAVGGLPIVTGK
Ga0185543_103642213300029318MarineMADISLGGAGSDTIYAQHINNFTGELFKVGGQRTPLLTAVGG
Ga0316202_1009859713300032277Microbial MatMGAIATPDPIYASDINNFQGELFKVGGQRTPFLSA
Ga0348335_001570_16548_166793300034374AqueousMGAITTPDPIYASDINNFQGELFKVGGQRTPFLSAMGGLTGGGK
Ga0348335_031931_2167_22983300034374AqueousMGPITTPDPIYASDINNFQGELFKVGGQRTPFLSAMGGLTGGGK


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.