Metagenome / Metatranscriptome Family F074861

Basic Information
Family ID	F074861
Family Type	Metagenome / Metatranscriptome
Number of Sequences	119
Average Sequence Length	75 residues
Representative Sequence	IHIHENFDEDGDSSIHITVCYNVNGDAEYEDSWRLYTDSGFSDAISALLGTDVMFTEQGMQDDGYASMEL
Number of Associated Samples	77
Number of Associated Scaffolds	119

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	18.49 %
% of genes from short scaffolds (< 2000 bps)	15.13 %
Associated GOLD sequencing projects	71
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.41

Most Common Taxonomy
Group	Unclassified (92.437 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake (30.252 % of family members)
Environment Ontology (ENVO)	Unclassified (69.748 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (86.555 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 13.27% β-sheet: 20.41% Coil/Unstructured: 66.33%
Feature Viewer

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Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	92.44 %
All Organisms	root	All Organisms	7.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	92.44 %
Viruses	superkingdom	All Organisms → Viruses	7.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	92.44 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	7.56 %

Scaffold	Taxonomy	Length	IMG/M Link
3300003277\|JGI25908J49247_10051513	Not Available	1075	Open in IMG/M
3300003393\|JGI25909J50240_1021427	Not Available	1484	Open in IMG/M
3300003411\|JGI25911J50253_10050123	Not Available	1430	Open in IMG/M
3300003411\|JGI25911J50253_10076569	All Organisms → Viruses → Predicted Viral	1069	Open in IMG/M
3300005584\|Ga0049082_10085090	Not Available	1109	Open in IMG/M
3300008055\|Ga0108970_10141988	All Organisms → Viruses → Predicted Viral	1501	Open in IMG/M
3300008258\|Ga0114840_1002365	All Organisms → Viruses → Predicted Viral	3426	Open in IMG/M
3300009152\|Ga0114980_10122290	Not Available	1550	Open in IMG/M
3300009164\|Ga0114975_10530593	Not Available	632	Open in IMG/M
3300010334\|Ga0136644_10447171	Not Available	727	Open in IMG/M
3300010885\|Ga0133913_12815013	All Organisms → Viruses → Predicted Viral	1171	Open in IMG/M
3300017778\|Ga0181349_1018584	Not Available	2848	Open in IMG/M
3300019784\|Ga0181359_1018241	All Organisms → Viruses → Predicted Viral	2629	Open in IMG/M
3300020160\|Ga0211733_10146718	All Organisms → Viruses → Predicted Viral	2306	Open in IMG/M
3300020172\|Ga0211729_10407304	Not Available	782	Open in IMG/M
3300021519\|Ga0194048_10099941	All Organisms → Viruses → Predicted Viral	1117	Open in IMG/M
3300027734\|Ga0209087_1204821	Not Available	754	Open in IMG/M
3300027759\|Ga0209296_1142643	All Organisms → Viruses → Predicted Viral	1086	Open in IMG/M
3300027797\|Ga0209107_10186059	Not Available	1034	Open in IMG/M
3300031857\|Ga0315909_10570440	Not Available	764	Open in IMG/M
3300032092\|Ga0315905_10198773	Not Available	1974	Open in IMG/M
3300034102\|Ga0335029_0237371	All Organisms → Viruses → Predicted Viral	1186	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.16%
Host-Associated	Host-Associated	0.84%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	99.16%
Plants	Host-Associated → Plants	0.84%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	95.80%
Marine	Environmental → Aquatic → Marine	3.36%
Leaf	Host-Associated → Plants → Leaf	0.84%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	60.50%
Lentic	Environmental → Aquatic → Freshwater → Lentic	21.01%
River	Environmental → Aquatic → Freshwater → River	7.56%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	4.20%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	1.68%
Unclassified	Environmental → Aquatic → Marine → Unclassified	1.68%
Lotic	Environmental → Aquatic → Freshwater → Lotic	0.84%
Ice	Environmental → Aquatic → Freshwater → Ice	0.84%
Creek	Environmental → Aquatic → Freshwater → Creek	0.84%
Unclassified	Host-Associated → Plants → Leaf → Unclassified	0.84%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	60.50%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	19.33%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	7.56%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	4.20%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	1.68%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	1.68%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	1.68%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	0.84%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	0.84%
Unclassified	Environmental → Aquatic → Freshwater → Creek → Unclassified	0.84%
Unclassified	Host-Associated → Plants → Leaf → Unclassified → Unclassified	0.84%

Habitat	Taxonomy	Distribution
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	30.25%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	17.65%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	17.65%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	7.56%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	7.56%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	4.20%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	2.52%
Anoxic Zone Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater	2.52%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	1.68%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater And Sediment	1.68%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	1.68%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	0.84%
Freshwater	Environmental → Aquatic → Freshwater → Ice → Unclassified → Freshwater	0.84%
Freshwater	Environmental → Aquatic → Freshwater → Creek → Unclassified → Freshwater	0.84%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	0.84%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	0.84%
Estuary	Host-Associated → Plants → Leaf → Unclassified → Unclassified → Estuary	0.84%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000756	Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB hypolimnion July 2011	Environmental	Open in IMG/M
3300003277	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SD	Environmental	Open in IMG/M
3300003388	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.SN	Environmental	Open in IMG/M
3300003393	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.DD	Environmental	Open in IMG/M
3300003395	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM110.SN	Environmental	Open in IMG/M
3300003404	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM110.DCMD	Environmental	Open in IMG/M
3300003411	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.SD	Environmental	Open in IMG/M
3300003488	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM110.DN	Environmental	Open in IMG/M
3300003493	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.SN	Environmental	Open in IMG/M
3300005517	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (version 4)	Environmental	Open in IMG/M
3300005581	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF	Environmental	Open in IMG/M
3300005584	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG HU45MSRF	Environmental	Open in IMG/M
3300006484	Estuarine microbial communities from the Columbia River estuary, USA - metaG S.535	Environmental	Open in IMG/M
3300007708	Estuarine microbial communities from the Columbia River estuary - metaG 1371B-02	Environmental	Open in IMG/M
3300008055	Metatranscriptomes of the Eelgrass leaves and roots. Combined Assembly of Gp0128390, Gp0128391, Gp0128392, and Gp0128393	Host-Associated	Open in IMG/M
3300008258	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample HABS-E2014-0110-3-NA	Environmental	Open in IMG/M
3300008259	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0132-C-NA	Environmental	Open in IMG/M
3300009151	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_MF_MetaG	Environmental	Open in IMG/M
3300009152	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_EF_MetaG	Environmental	Open in IMG/M
3300009159	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG	Environmental	Open in IMG/M
3300009164	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130626_EF_MetaG	Environmental	Open in IMG/M
3300009180	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140625_EF_MetaG	Environmental	Open in IMG/M
3300009181	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_MF_MetaG	Environmental	Open in IMG/M
3300009183	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaG	Environmental	Open in IMG/M
3300009184	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_EF_MetaG	Environmental	Open in IMG/M
3300010160	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130628_MF_MetaG	Environmental	Open in IMG/M
3300010334	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_EF_MetaG (v2)	Environmental	Open in IMG/M
3300010885	northern Canada Lakes Co-assembly	Environmental	Open in IMG/M
3300011010	Freshwater microbial communities from Western Basin Lake Erie, Ontario, Canada - Station 970 - Surface Ice	Environmental	Open in IMG/M
3300011011	Freshwater microbial communities from Western Basin Lake Erie, Ontario, Canada - Station 970 - Top - Depth 1m	Environmental	Open in IMG/M
3300012000	Freshwater microbial communities from Lake Lanier in Georgia, USA - LL_1007A	Environmental	Open in IMG/M
3300012663	Freshwater microbial communities from Indian River, Ontario, Canada - S50	Environmental	Open in IMG/M
3300013004	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES118 metaG	Environmental	Open in IMG/M
3300013006	Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - GEODES005 metaG	Environmental	Open in IMG/M
3300013014	Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - GEODES006 metaG	Environmental	Open in IMG/M
3300013295	northern Canada Lakes metatranscriptome co-assembly	Environmental	Open in IMG/M
3300013372	Freshwater microbial communities from Lake Erie, Ontario, Canada. Combined Assembly of 10 SPs	Environmental	Open in IMG/M
3300017778	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.S.D	Environmental	Open in IMG/M
3300019784	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.D	Environmental	Open in IMG/M
3300020151	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_202 megahit1	Environmental	Open in IMG/M
3300020160	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_105 megahit1	Environmental	Open in IMG/M
3300020161	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_101 megahit1	Environmental	Open in IMG/M
3300020172	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_102 megahit1	Environmental	Open in IMG/M
3300020205	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_103 megahit1	Environmental	Open in IMG/M
3300021328	Metatranscriptome of estuarine water microbial communities from the Columbia River estuary, Oregon, United States ? R877 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021519	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L222-5m	Environmental	Open in IMG/M
3300021963	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_657D	Environmental	Open in IMG/M
3300022190	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.N	Environmental	Open in IMG/M
3300022407	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.S.D	Environmental	Open in IMG/M
3300022747	Freshwater microbial communities from McNutts Creek, Athens, Georgia, United States - 29-17_Aug_MG	Environmental	Open in IMG/M
3300027132	Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Miss_RepC_8h	Environmental	Open in IMG/M
3300027144	Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Cont_RepA_0h	Environmental	Open in IMG/M
3300027145	Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Law_RepA_8h	Environmental	Open in IMG/M
3300027147	Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Yuk_RepC_8h	Environmental	Open in IMG/M
3300027287	Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Atlam_RepA_8d	Environmental	Open in IMG/M
3300027291	Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Colum_RepB_8d	Environmental	Open in IMG/M
3300027293	Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Law_RepA_8d	Environmental	Open in IMG/M
3300027600	Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Atlam_RepA_8h	Environmental	Open in IMG/M
3300027644	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.SN (SPAdes)	Environmental	Open in IMG/M
3300027679	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.DN (SPAdes)	Environmental	Open in IMG/M
3300027734	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027759	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027763	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140625_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027782	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027785	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SN (SPAdes)	Environmental	Open in IMG/M
3300027797	Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB hypolimnion July 2011 (SPAdes)	Environmental	Open in IMG/M
3300027974	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300031786	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA124	Environmental	Open in IMG/M
3300031857	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA125	Environmental	Open in IMG/M
3300032092	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA121	Environmental	Open in IMG/M
3300032093	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA117	Environmental	Open in IMG/M
3300034018	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME04Jul2014-rr0021	Environmental	Open in IMG/M
3300034021	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME01Oct2014-rr0057	Environmental	Open in IMG/M
3300034102	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Jul2002-rr0112	Environmental	Open in IMG/M
3300034105	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME15May2014-rr0127	Environmental	Open in IMG/M
3300034112	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Aug2014-rr0191	Environmental	Open in IMG/M
3300034284	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME08Jul2016-rr0075	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12421J11937_100784401	3300000756	Freshwater And Sediment	IEAVTVTSIHIHERFDEDGDSSIHIAVCYNVNGDEEYEDSWRLYTDTGFEEAISELLGTRVFFTEQGMQDDGYASME*
JGI25908J49247_100515133	3300003277	Freshwater Lake	LVQLAGDSCWDCELEAVTVTSIHIHEQWWDELDGDSSIHITVCYNVNGDTEYEDSWRLYTDTGFADAISTLLGTEVMFTEQGMQEDGYASMEL*
JGI25908J49247_101047642	3300003277	Freshwater Lake	AVTVTSIHIHETWWDELDGDSSIHIAVCYTVDGDAEYEGSWRLYTDSGFVDAISTLLGTEVMFTEQGMQDNGYASMEL*
JGI25910J50241_101481732	3300003388	Freshwater Lake	EAVTVTSIHIHETFWDDTSTVHIAVCYDVDGVDGSEVEGSWRLYTDSGFTEAISTLLGTQVFFTEQGMQDDGYASME*
JGI25909J50240_10214271	3300003393	Freshwater Lake	DSSIHITVCYNVNGDTEYEDSWRLYTDTGFADAISTLLGTEVMFTEQGMQEDGYASMEL*
JGI25909J50240_10496003	3300003393	Freshwater Lake	SIHIHENFDEDGDSSIHIXVCXNVXGDAEYEDSWRLYTDSGFSDAISALLGTDVMFTEQGMQEDGYASMEL*
JGI25917J50250_10993661	3300003395	Freshwater Lake	EAVTVTSIHIHESFDEDGDSSIHIAVCYNVDGDAEYEDSWRLYTDNGFSDAISALLGTAVDFTEQGMQEDGYASMEL*
JGI25920J50251_100605913	3300003404	Freshwater Lake	QLAGDSIWDCEIEAVTVTSIHIHETWWDELDGDSSIHIAVCYTVNGDAEYEDSWRLYTDSGFVDAISTLLGTDVMFTEQGMQDDGYASMEL*
JGI25920J50251_100845062	3300003404	Freshwater Lake	VQLAGDSIWDCEIEAVTVTSIHIHETWWDELDGDSSIHIAVCYTVDGDAEYEGSWRLYTDSGFVDAISTLLGTEVMFTEQGMQDNGYASMEL*
JGI25911J50253_100501231	3300003411	Freshwater Lake	SIHIHEQWWDELDGDSSIHITVCYNVNGDTEYEDSWRLYTDTGFADAISTLLGTEVMFTEQGMQEDGYASMEL*
JGI25911J50253_100765694	3300003411	Freshwater Lake	TSIHIHERFDEDGDSSIHIAVCYDVDGDEDYEGSWRLYTDSGFSDAISALLGTAVDFTEQGMQDDGYASMEL*
JGI25919J51413_10034995	3300003488	Freshwater Lake	HIHETWWDELDGDSSIHIAVCYTVNGDAEYEDSWRLYTDSGFVDAISTLLGTDVMFTEQGMQDDGYASMEL*
JGI25923J51411_10105981	3300003493	Freshwater Lake	DSIWDCEIEAVTVTSIHIHETWWDELDGDSSIHIAVCYTVNGDAEYEDSWRLYTDSGFVDAISTLLGTDVMFTEQGMQDDGYASMEL*
Ga0070374_103874231	3300005517	Freshwater Lake	EAVTVTSIHIHETWWDELDGDSSIHIAVCYTVDGDAEYEGSWRLYTDSGFVDAISTLLGTEVMFTEQGMQDNGYASMEL*
Ga0049081_101678271	3300005581	Freshwater Lentic	VQLAGDSIWDCEIEAVTVTSIHIHERFDEDGDSSIHIAVCYNVNGDEEYEDSWRLYTDTGFEEAISELLGTRVFFTEQGMQDDGYASME*
Ga0049082_100850901	3300005584	Freshwater Lentic	DGDSSIHITVCYNVNGDTEYEDSWRLYTDSGFADAISTLLGTEVMFTEQGMQEDGYASMEL*
Ga0070744_102274462	3300006484	Estuarine	YTHIGVTYEVDGDDDYEGSWRLYTDSGFSDAVSALLMTDVDFTEQGMQEDNYASMEL*
Ga0102859_10719393	3300007708	Estuarine	CIVETFDEDDGDIYTHIGVTYEVDGDDDYEGSWRLYTDSGFSDAVSALLMTDVDFTEQGMQEDNYASMEL*
Ga0108970_101419881	3300008055	Estuary	SIHIAVCYTVDGDAEYEDSWRLYTDSGFVDAISTLLGTDVMFTEQGMQDDGYASMEL*
Ga0114840_100236512	3300008258	Freshwater, Plankton	DCNVLVQLAGDSIWDCELEAVTVTSIHIHETWWDELDGDSSIHIAVCYTVDGDAEYEDSWRLYTDSGFSDAISTLLGTDVMFTEQGMQDDGYASMEL*
Ga0114841_11346361	3300008259	Freshwater, Plankton	SIHIHESFDEDGDSSIHITVCYNVDGDAEYEGSWRLYTDTGFADAISTLLGTQVFFTEQGMQDDGFASME*
Ga0114841_12345581	3300008259	Freshwater, Plankton	IHIAVCYNVDGDAEYEDSWRLYTDNGFSDAISALLGTAVDFTEQGMQEDGYASMEL*
Ga0114962_100982265	3300009151	Freshwater Lake	VTVKSIHIHETFDEDGDSSIHIAVCYDVDGVNGEEVEGSWRMYTDSGFEEAISELLGTQVFFTEQGMQDDGYASME*
Ga0114980_101222905	3300009152	Freshwater Lake	VQLAGDSIWDCELEAVTVTSIHIHETWWDELDGDSSIHITVCYNVNGDEEYEDSWRLYTDTGFSDAISALLGTDVMFTEQGMQEDGCASMEL*
Ga0114980_101880971	3300009152	Freshwater Lake	IHITVCYNVNGDEEYEDSWRLYTDTGFEEAISELLGTQVFFTEQGMQDDGFASME*
Ga0114978_102786891	3300009159	Freshwater Lake	SIHIHEQWWDELDGDSSIHITVCYNVNGDTEYEDSWRLYTDSGFADAISTLLGTEVMFTEQGMQENNMASMEL*
Ga0114978_104763991	3300009159	Freshwater Lake	SINAYYEVDGDAEYEDSWRMYTDSGFTDAVSELLGYDVSYTEQGMQEDGMASLEC*
Ga0114978_106268432	3300009159	Freshwater Lake	TVTSIHIHESFDEDGDSSIHIAVCYNVDGDAEYEDSWRLYTDNGFSDAISALLGTAVDFTEQGMQEDGYASMEL*
Ga0114978_107933482	3300009159	Freshwater Lake	VTSIHIHESFDEDGDSSIHITVCYNVDGDAEYEGSWRLYTDTGFEEAISELLGTRVFFTEQGMQDDGFASME*
Ga0114975_102133551	3300009164	Freshwater Lake	GDSIWDCEIEAVTVTSIHIHEQWWDELDGDSSIHITVCYNVNGDTEYEDSWRLYTDSGFADAISTLLGTEVMFTEQGMQENNMASMEL*
Ga0114975_102810541	3300009164	Freshwater Lake	IHIHENFDEDGDSSIHITVCYNVDGDTEYEGSWRMYTDSGFTDAISALLGTDVSFTEQGMQDDGYASMEL*
Ga0114975_103751451	3300009164	Freshwater Lake	HENFDEDGDSSIHITVCYNVDGDAEYEGSWRLYTDTGFADAISTLLGTQVFFTEQGMQDDGFASME*
Ga0114975_103824021	3300009164	Freshwater Lake	IHIHENFDEDGDSSIHITVCYNVDGDTEYEGSWRLYTDTGFEEAISELLGTQVFFTEQGMQDDGFASME*
Ga0114975_104973163	3300009164	Freshwater Lake	FDEDGDSSIHITVCYNVDGDAEYEGSWRLYTDTGFSDAVSALLGTAVDFTEQGMQDDGYASME*
Ga0114975_105305933	3300009164	Freshwater Lake	EAVTVTSINIHENFDEDGDSSIHITVCYTVDGDPEYEDSWRLYTDSGFEEAISELLGTSVSFTEQGMQDDGFASMEL*
Ga0114979_102848931	3300009180	Freshwater Lake	SIWDCELEAVTVTSIHIHETWWDELDGDSSIHIAVCYTVDGDAEYEDSWRLYTDSGFVDAISALLGTDVMFTEQGMQDDGYASMEL*
Ga0114979_104471901	3300009180	Freshwater Lake	HIHENFDEDGDSSIHIAVCYNVDGDPEYEGSWRLYTDSGFTEAISELLGTQVFFTEQGMQDDGYASME*
Ga0114979_106263871	3300009180	Freshwater Lake	FDEDGDSSIHITVCYNVDGDAEYEGSWRLYTDTGFEEAISELLGTRVFFTEQGMQDDGFASME*
Ga0114969_106344211	3300009181	Freshwater Lake	TVKSIHIHETFYEDDDSSIHIAVCYDVDGVSGEEVEGSWRIYTDNGFSDAISALLGTAVDFTEQGMQDDGYASMEL*
Ga0114974_103143333	3300009183	Freshwater Lake	AGDSIWDCELETVTVTSIHISETDYGDGSGDTSIHIAVCYNVDGVDGSEVEGSWRMYTDSGFSDAISALLGTDVSFTEQGMQDDGYASMEL*
Ga0114976_101952681	3300009184	Freshwater Lake	IHIAVCYNVDGDAEYEDSWRMYTDTGFTDAISELLGCSVSFTEQGMQDDGYASMEL*
Ga0114976_102267274	3300009184	Freshwater Lake	YDCNVEVQLAGDSIWDCEIEAVTVTSIHIHENFDEDGDSSIHITVCYNVDGDTEYEGSWRMYTDSGFTDAISALLGTDVSFTEQGMQDDGYASMEL*
Ga0114976_103529541	3300009184	Freshwater Lake	AVTVTSIHIHESFDEDGDSSIHIAVCYNVDGDAEYEDSWRLYTDNGFSDAISALLGTAVDFTEQGMQEDGYASMEL*
Ga0114976_104641131	3300009184	Freshwater Lake	AVTVTSIHIHETWWDELDGDSSIHIAVCYTVDGDAEYEDSWRLYTDSGFVDAISALLGTDVMFTEQGMQDDGYASMEL*
Ga0114976_106004291	3300009184	Freshwater Lake	VEVQLAGDSIWDCELEAVTITSIHISETDWGDGDTSIHIAVCYSVDGFDDGEALEGSWRIYTDSGFEAAVSELLGTDVTFTEQGMQDDGYASMEL*
Ga0114967_106135931	3300010160	Freshwater Lake	IHIAETDYGDSVSTHIAVCYDVNGVDGSEVEGSWRMYTDSGFEEAVSTLLGTTVFFTEQGMQQDGYASMEL*
Ga0136644_104471711	3300010334	Freshwater Lake	GYVSINAYYEVDGDDEYEDSWRMYTDTGFTDAVSKLLGFDVSFTEQGMQEDGMASLEC*
Ga0133913_123179613	3300010885	Freshwater Lake	VTSIHIHEQWWDELDGDSSIHITVCYNVNGDTEYEDSWRLYTDSGFADAISTLLGTEVMFTEQGMQENNMASMEL*
Ga0133913_128150131	3300010885	Freshwater Lake	SAWDCELEAVTVKSIHIHETFDEDGDSSIHIAVCYDVDGVSGEDVEGSWRMYTDSGFEEAVSALLGTSVSFTEQGMQDDGYASMEL*
Ga0133913_133392401	3300010885	Freshwater Lake	AGDSIWDCELETVTVKSIHISETDYGDGSGDTSIHIAVCYDVDGVDGSEVEGSWRMYTDSGFSDAISALLGTDVSFTEQGMQDDGYASMEL*
Ga0139557_10090461	3300011010	Freshwater	IWDCEIEAVTVTSIHIHERFDEDGDSSIHIAVCYDVDGDEDYEGSWRLYTDSGFSDAISALLGTAVDFTEQGMQDDGYASMEL*
Ga0139556_10193201	3300011011	Freshwater	FDEDGDSSIHITVCYNVDGDAEYEGSWRLYTDTGFEEAISKLLGTQVFFTEQGMQEDGMASME*
Ga0119951_11072113	3300012000	Freshwater	AVPVTSIHIHESFDEDGDSSIHIAVCYNVDGDAEYEDSWRLYTDTGFADAISALLGTAVDFTEQGMQEDGYASME*
Ga0157203_10218134	3300012663	Freshwater	WDCEIEAVTVTSIHIHESFDEDGDSSIHIAVCYDVDGVSGEDVEGSWRLYTDSGFTEAISELLGTTVFFTEQGMQDDGYASME*
Ga0164293_110060411	3300013004	Freshwater	WDCELEAVTVTSIHIHENFWEDTSTVHIAVCYNVDGVDGSEVEGSWRMYTDSGFEEAVSALLGTDVRFTEQGMQDDGFASME*
Ga0164294_107622631	3300013006	Freshwater	IHITVCYNVDGDAEYEDSWRLYTDSGFSDAISALLGTDVMFTEQGMQEDGYASMEL*
Ga0164295_108318681	3300013014	Freshwater	IAVCYDVDGDAEYEGSWRLYTDTGFEEAISELLGTTVFFTEQGMQEDGYASME*
Ga0170791_140954276	3300013295	Freshwater	DSSIHITICYTVDGDPEYEDSWRLYTDSGFEEAISELLGTSVSFTEQGMQDDGYASME*
Ga0170791_144477042	3300013295	Freshwater	DSIWDCEIKRVTITGIHIAETFDEDDGDVYIQSVYAHIGVTYDVDGEDGSEVEGSWRLYTDNGFSDAVSELLGTEVDYTEQGMQDDGYASMEL*
Ga0177922_102264304	3300013372	Freshwater	IWDCEIEAVTVTSIHIHERFDEDGDSSIHIAVCYNVNGDEEYEDSWRLYTDTGFEEAISELLGTRVFFTEQGMQDDGYASME*
Ga0177922_103943336	3300013372	Freshwater	VQLAGDSIWDCEIEAVTVTSIHIHERFDEDGDSSIHIAVCYDVDGDEDYEGSWRLYTDSGFSDAISALLGTAVDFTEQGMQDDGYASMEL*
Ga0177922_104653572	3300013372	Freshwater	IHIHENFDEDGDSSIHITVCYNVNGDAEYEDSWRLYTDSGFSDAISALLGTDVMFTEQGMQDDGYASMEL*
Ga0181349_10185841	3300017778	Freshwater Lake	TTYDCNVLVQLAGDSCWDCELEAVTVTSIHIHEQWWDELDGDSSIHITVCYNVNGDTEYEDSWRLYTDTGFADAISTLLGTEVMFTEQGMQEDGYASMEL
Ga0181349_10781311	3300017778	Freshwater Lake	TTYDCNVLVQLAGDSIWDCELEAVTVTSIHIHETFWDDTSTVHIAVCYDVDGVDGSEVEGSWRLYTDTGFTEAISTLLGTQVFFTEQGMQDDGYASME
Ga0181359_10182411	3300019784	Freshwater Lake	ITVCYNVDGDAEYEGSWRLYTDTGFEEAISKLLGTQVFFTEQGMQEDGMASME
Ga0211736_109275591	3300020151	Freshwater	EAVTVTSIHIHETFWDGDSSIHITVCYNVDGDTEYEGSWRLYTDSGFANAISELLGTQVFFTEQGMQDDGYASME
Ga0211733_100773911	3300020160	Freshwater	SIHITVCYNVDGDTEYEGSWRLYTDSGFANAISELLGTDVSYTEQGMQDDGYASMEL
Ga0211733_101055881	3300020160	Freshwater	TVTSIHIHENFWEDTSTIHITVCYNVDGDAEYEGSWRMYTDTGFEAAIGELLGTTVFFTEQGMQDDGYASME
Ga0211733_101467181	3300020160	Freshwater	VEVQLAGDSIWDCELEAVTVTSIHIHENFWDDTSTVHIAVCYDVNGVDGSEVEGSWRLYTDSGFTDAISTLLGTQVFFTEQGMQDDGYASME
Ga0211733_101472291	3300020160	Freshwater	ITVCYNVDGDAEYEDSWRLYTDSGFSDAISALLGTDVSFTEQGMQDDGFASMEL
Ga0211733_101478061	3300020160	Freshwater	ITVCYNVDGDAEYEDSWRLYTDSGFSDAISALLGTAVDFTEQGMQDDGFASMEL
Ga0211733_102550861	3300020160	Freshwater	NVEVQLAGDSIWDCELEAVTVTSIHIHENFWEDTSTVHITVCYNVDGDTEYEDSWRLYTDSGFSDAISALLGTDVSFTEQGMQDDGYASMEL
Ga0211726_100921423	3300020161	Freshwater	VQLAGDSIWDCELEAVTVTSIHIHENFWEDTSTVHITVCYNVNGDTEYEDSWRLYTDSGFSDAISALLGTAVDFTEQGMQEDGYASMEL
Ga0211726_104069824	3300020161	Freshwater	TYNCNVEVQLAGDSIWDCELEAVTVTSIHIHETFWDDTSTVHIAVCYDVNGVDGSEVEGSWRLYTDSGFTDAISTLLGTQVFFTEQGMQDDGYASME
Ga0211729_103326962	3300020172	Freshwater	TVTSIHIHENFWEDTSTVHIAVCYNVDGDAEYEDSWRLYTDSGFSDAISALLGTAVDFTEQGMQDDGYASMEL
Ga0211729_103674111	3300020172	Freshwater	SIWDCEIEAVTVTSIHIHETFWDGDSSIHIAVCYNVDGDAEYEGSWRLYTDSGFSDAISALLGTAVDFTEQGMQDDGYASMEL
Ga0211729_104073041	3300020172	Freshwater	TFWDGDSSIHITVCYNVDGDAEYEGSWRMYTDTGFEAAIGELLGTTVFFTEQGMQDDGYASME
Ga0211731_111928131	3300020205	Freshwater	SIWDCEIEAVTVTSIHIHETFWDGDSSIHIAVCYNVDGDAEYEGSWRLYTDSGFSDAVSELLGTDVSYTEQGMQDDGYASMEL
Ga0211731_116088511	3300020205	Freshwater	WDCDIEAVTITGICISETDWGDGEPSIHIAVTYNVNGDEEYEGSWRLYTDSGFEAAVSELLGTDVSYTEQGMQDNGYASMEL
Ga0210298_11294641	3300021328	Estuarine	TTYDCNVEVQLAGDSIWDCELEAVTVTSIHIHENFWDDTSTIHIAVCYNVDGVDGAEVEGSWRLYTDTGFADAISTLLGTQVFFTEQGMQDDGFASME
Ga0194048_100999413	3300021519	Anoxic Zone Freshwater	ITSIHIAETFDEDGDSSIHIAVCYDVDGVNGEEVEGSWRMYTDSGFEEAVSELLGTDVSYTEQGMQDDGYASMEL
Ga0194048_101622161	3300021519	Anoxic Zone Freshwater	HIHETFYEDGDSSIHIAVCYDVDGVSGEEVEGSWRMYTDSGFTAAISELLGTTVFFTEQGMQDDGYASME
Ga0194048_103498422	3300021519	Anoxic Zone Freshwater	HIAETDYGDGDTSIHIAVCYEVDGDDEYEGSWRMYTDSGFEEAVSALLGTSVSFTEQGMQDDGYASMEL
Ga0222712_103922694	3300021963	Estuarine Water	DSSIHITVCYNVNGDAEYEDSWRLYTDSGFSDAISALLGTDVMFTEQGMQEDGYASMEL
Ga0181354_11565763	3300022190	Freshwater Lake	HITVCYNVDGDAEYEGSWRLYTDTGFEEAISKLLGTQVFFTEQGMQDDGFASME
Ga0181351_11251503	3300022407	Freshwater Lake	WDCELEAVTVTSIHIHESFDEDGDSSIHITVCYNVDGDAEYEGSWRLYTDTGFEEAISKLLGTQVFFTEQGMQDDGFASME
Ga0228703_11474171	3300022747	Freshwater	DGDTSIHIAVVHTGGEGSWQIYTDSGFEAAVSDLLGTDVTFTEQGMQDDGYASMEL
Ga0255110_10340753	3300027132	Freshwater	TYDCNVEVQLAGDSAWDCELEAVTVTSIHIHESFDEDGDSSIHIAVCYNVDGDAEYEDSWRMYTDTGFSDAISALLGTAVDFTEQGMQEDGYASMEL
Ga0255102_10090971	3300027144	Freshwater	TVCYNVDGDTEYEDSWRLYTDTGFEEAISELLGTRVFFTEQGMQDDGFASME
Ga0255114_10510842	3300027145	Freshwater	LEAVTVTSIHIHESFDEDGDSSIHIAVCYNVDGDAEYEDSWRMYTDTGFSDAISALLGTAVDFTEQGMQEDGYASMEL
Ga0255114_10521201	3300027145	Freshwater	FDEDGDSSIHITVCYNVNGDAEYEDSWRLYTDSGFSDAISALLGTDVMFTEQGMQDDGYVSMEL
Ga0255113_10606901	3300027147	Freshwater	ITVCYNVDGDTEYEDSWRLYTDTGFEEAISELLGTRVFFTEQGMQDDGFASME
Ga0255135_10386061	3300027287	Freshwater	CNVEVQLAGDSAWDCELEAVTVTSIHIHESFDEDGDSSIHIAVCYNVDGDAEYEDSWRMYTDTGFSDAISALLGTAVDFTEQGMQEDGYASMEL
Ga0255139_10225371	3300027291	Freshwater	SIWDCELEAVTVTSIHIHEQWWDELDGDSSIHITVCYNVNGDTEYEDSWRLYTDTGFADAISTLLGTEVMFTEQGMQEDGYASMEL
Ga0255132_10381701	3300027293	Freshwater	DEDGDSSIHIAVCYNVDGDAEYEDSWRLYTDNGFSDAISALLGTAVDFTEQGMQEDGYASMEL
Ga0255117_10213135	3300027600	Freshwater	NVEVQLAGDSIWDCEIEAVTVTSIHIHESFDEDGDSSIHIAVCYNVDGDAEYEDSWRLYTDNGFSDAISALLGTAVDFTEQGMQEDGYASMEL
Ga0209356_11590701	3300027644	Freshwater Lake	SIHIAVCYTVDGDAEYEDSWRLYTDSGFVDAISTLLGTDVMFTEQGMQDDGYASMEL
Ga0209769_12573271	3300027679	Freshwater Lake	IWDCEIEAVTVTSIHIHERFDEDGDSSIHIAVCYDVDGDEDYEGSWRLYTDSGFSDAISALLGTAVDFTEQGMQDDGYASMEL
Ga0209087_12048213	3300027734	Freshwater Lake	IHESFDEDGDSSIHIAVCYNVDGDAEYEDSWRLYTDNGFSDAISALLGTAVDFTEQGMQEDGYASMEL
Ga0209087_12499473	3300027734	Freshwater Lake	VTSIHIHETWWDELDGDSSIHIAVCYTVDGDAEYEDSWRLYTDSGFVDAISALLGTDVMFTEQGMQDDGYASMEL
Ga0209296_11426434	3300027759	Freshwater Lake	GDSSIHITVCYNVDGDAEYEGSWRLYTDSGFADAISTLLGTQVFFTEQGMQDDGYASME
Ga0209296_11866801	3300027759	Freshwater Lake	ETWWDELDGDSSIHITVCYNVNGDEEYEDSWRLYTDTGFSDAISALLGTDVMFTEQGMQEDGCASMEL
Ga0209088_101952373	3300027763	Freshwater Lake	SIWDCELEAVTVTSIHIHETWWDELDGDSSIHIAVCYTVDGDAEYEDSWRLYTDSGFVDAISALLGTDVMFTEQGMQDDGYASMEL
Ga0209088_103298111	3300027763	Freshwater Lake	ELEAVTVTSIHIHETWWDELDGDTSIHITVCYNVNGDEEYEDSWRLYTDSGFSDAISALLCTDVMFTEQGMQEDGCASMEL
Ga0209500_102868911	3300027782	Freshwater Lake	SIHIHEQWWDELDGDSSIHITVCYNVNGDTEYEDSWRLYTDSGFADAISTLLGTEVMFTEQGMQENNMASMEL
Ga0209246_102432953	3300027785	Freshwater Lake	WDCEIEAVTVTSIHIHERFDEDGDSSIHIAVCYDVDGDEDYEGSWRLYTDSGFSDAISALLGTAVDFTEQGMQDDGYASMEL
Ga0209107_101860591	3300027797	Freshwater And Sediment	HENFDEDGDSSIHIAVCYNVDGDAEYEDSWRLYTDNGFSDAISALLGTAVDFTEQGMQEDGYASMEL
Ga0209299_12738033	3300027974	Freshwater Lake	HIHETWWDELDGDTSIHITVCYNVNGDEEYEDSWRLYTDSGFSDAISALLCTDVMFTEQGMQEDGCASMEL
Ga0315908_107264642	3300031786	Freshwater	LVQLAGDSIWDCELEAVTVTSIHIHENFDEDGDSSIHITVCYNVDGDTEYEDSWRLYTDSGFADAISTLLGTEVMFTEQGMQDDGYASMEL
Ga0315909_105704401	3300031857	Freshwater	VTSIHIHESFDEDGDSSIHITVCYNVDGDAEYEGSWRLYTDSGFEEAISELLGTQVFFTEQGMQDDGFASME
Ga0315905_101987731	3300032092	Freshwater	HEQWWDELDGDSSIHITVCYNVNGDTEYEDSWRLYTDTGFADAISTLLGTEVMFTEQGMQEDGYASMEL
Ga0315905_103429526	3300032092	Freshwater	YDCNVLVQLAGDSIWDCELEAVTVTSIHIHENFWEDTSTIHITVCYNVNGDTEYEDSWRLYTDSGFSDAISALLGTDVMFTEQGMQDDGYASMEL
Ga0315902_106965013	3300032093	Freshwater	ITVCYNVNGDTEYEDSWRLYTDTGFADAISTLLGTEVMFTEQGMQEDGYASMEL
Ga0334985_0079008_2_256	3300034018	Freshwater	WDCEIEAVTVTSVHIHEQWWDELDGDSSIHITVCYNVDGDAEYEGSWRLYTDSGFVDAISTLLGTDVMFTEQGMQDDGYASMEL
Ga0335004_0246703_3_254	3300034021	Freshwater	DCEIEAVTVTSVHIHEQWWDELDGDSSIHITVCYNVDGDAEYEGSWRLYTDSGFVDAISTLLGTDVMFTEQGMQDDGYASMEL
Ga0335029_0237371_983_1186	3300034102	Freshwater	HENFWDDTSTVHIAVCYNVDGVDGAEVEGSWRMYTDTGFTEAISALLGTQVFFTEQGMQDDGYASME
Ga0335035_0402739_3_194	3300034105	Freshwater	ELDGDSSIHITVCYNVDGDAEYEGSWRLYTDSGFVDAISTLLGTDVMFTEQGMQDDGYASMEL
Ga0335066_0711752_249_506	3300034112	Freshwater	IWDCEIEAVTVTSVHIHEQWWDELDGDSSIHITVCYNVDGDAEYEGSWRLYTDSGFVDAISTLLGTDVMFTEQGMQDDGYASMEL
Ga0335013_0265405_805_1077	3300034284	Freshwater	VQLAGDSIWDCELEAVTVTSIHIHENFWEDTSTVHIAVCYNVDGVDGSEVEGSWRMYTDSGFEEAVSALLGTDVRFTEQGMQDDGFASME

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.41
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.41
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F074861

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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