Metagenome / Metatranscriptome Family F074799

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F074799
Family Type	Metagenome / Metatranscriptome
Number of Sequences	119
Average Sequence Length	98 residues
Representative Sequence	MDDQQTRDHIKQHADAVVRGDMDAVVADFTEGLQPHVPEIAQALPQPVTGADVLSVDVGDTESVAMIRYSGDTGDVTIRSRWQDEGGRPVIVHAEPAE
Number of Associated Samples	93
Number of Associated Scaffolds	119

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	79.83 %
% of genes near scaffold ends (potentially truncated)	22.69 %
% of genes from short scaffolds (< 2000 bps)	80.67 %
Associated GOLD sequencing projects	83
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.76

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (91.597 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (10.924 % of family members)
Environment Ontology (ENVO)	Unclassified (34.454 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (73.109 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 25.40% β-sheet: 34.92% Coil/Unstructured: 39.68%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.76
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.76
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
d.17.4.27: NTF2-like	d3d9ra1	3d9r	0.78
d.17.4.25: NTF2-like	d2chca1	2chc	0.75
d.17.4.4: NTF2-like	d2b1xb1	2b1x	0.74
d.17.4.17: NTF2-like	d3cnxa1	3cnx	0.74
d.17.4.0: NTF2-like	d5cxoa1	5cxo	0.74

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 119 Family Scaffolds
PF12680	SnoaL_2	3.36
PF13581	HATPase_c_2	2.52
PF07883	Cupin_2	2.52
PF00106	adh_short	1.68
PF00903	Glyoxalase	1.68
PF07681	DoxX	1.68
PF13302	Acetyltransf_3	1.68
PF01799	Fer2_2	1.68
PF13487	HD_5	1.68
PF00756	Esterase	0.84
PF13088	BNR_2	0.84
PF11746	DUF3303	0.84
PF08546	ApbA_C	0.84
PF00908	dTDP_sugar_isom	0.84
PF00211	Guanylate_cyc	0.84
PF07584	BatA	0.84
PF02673	BacA	0.84
PF13344	Hydrolase_6	0.84
PF01933	CofD	0.84
PF12804	NTP_transf_3	0.84
PF00313	CSD	0.84
PF01381	HTH_3	0.84
PF14534	DUF4440	0.84
PF12681	Glyoxalase_2	0.84
PF13683	rve_3	0.84
PF10387	DUF2442	0.84
PF00768	Peptidase_S11	0.84
PF02518	HATPase_c	0.84
PF08044	DUF1707	0.84
PF08386	Abhydrolase_4	0.84
PF00254	FKBP_C	0.84
PF07508	Recombinase	0.84
PF04545	Sigma70_r4	0.84
PF02769	AIRS_C	0.84
PF01370	Epimerase	0.84
PF01844	HNH	0.84
PF04237	YjbR	0.84

COG ID	Name	Functional Category	% Frequency in 119 Family Scaffolds
COG2259	Uncharacterized membrane protein YphA, DoxX/SURF4 family	Function unknown [S]	1.68
COG4270	Uncharacterized membrane protein	Function unknown [S]	1.68
COG0391	Archaeal 2-phospho-L-lactate transferase/Bacterial gluconeogenesis factor, CofD/UPF0052 family	Carbohydrate transport and metabolism [G]	0.84
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.84
COG1893	Ketopantoate reductase	Coenzyme transport and metabolism [H]	0.84
COG1898	dTDP-4-dehydrorhamnose 3,5-epimerase or related enzyme	Cell wall/membrane/envelope biogenesis [M]	0.84
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.84
COG1968	Undecaprenyl pyrophosphate phosphatase	Lipid transport and metabolism [I]	0.84
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.84
COG2315	Predicted DNA-binding protein with Ã¢â‚¬Ëœdouble-wingÃ¢â‚¬â„¢ structural motif, MmcQ/YjbR family	Transcription [K]	0.84

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	91.60 %
Unclassified	root	N/A	8.40 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	91.60 %
Unclassified	root	N/A	8.40 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	91.60 %
Unclassified	root	N/A	8.40 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	68.07 %
Unclassified	root	N/A	8.40 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	5.04 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.84 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	68.07 %
Unclassified	root	N/A	8.40 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2.52 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.84 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	8.40 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	6.72 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4.20 %
Nevskiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales	1.68 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.84 %
Gammaproteobacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis	0.84 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	8.40 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	6.72 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	2.52 %
Sinobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae	1.68 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.84 %
Pseudohongiella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Pseudohongiella	0.84 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.84 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.84 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	8.40 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.52 %
Nevskia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia	1.68 %
unclassified Solirubrobacterales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales	1.68 %
unclassified Pseudohongiella	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Pseudohongiella → unclassified Pseudohongiella	0.84 %
Conexibacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae	0.84 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.84 %
Sorangiineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae	0.84 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.84 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	8.40 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.52 %
Nevskia soli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	1.68 %
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	1.68 %
Polyangiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae	0.84 %
Gemmatirosa	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa	0.84 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	0.84 %
Amycolatopsis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis	0.84 %
Conexibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter	0.84 %
Pseudohongiella sp. O18	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Pseudohongiella → unclassified Pseudohongiella → Pseudohongiella sp. O18	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	8.40 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.52 %
Nevskia soli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	1.68 %
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	1.68 %
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	0.84 %
Conexibacter woesei	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	0.84 %
unclassified Amycolatopsis	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → unclassified Amycolatopsis	0.84 %
Polyangiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae	0.84 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	0.84 %
Pseudohongiella sp. O18	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Pseudohongiella → unclassified Pseudohongiella → Pseudohongiella sp. O18	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	8.40 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.52 %
Nevskia soli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	1.68 %
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	1.68 %
Amycolatopsis sp. ATCC 39116	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → unclassified Amycolatopsis → Amycolatopsis sp. ATCC 39116	0.84 %
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	0.84 %
Conexibacter woesei	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	0.84 %
Polyangiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae	0.84 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	0.84 %
Pseudohongiella sp. O18	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Pseudohongiella → unclassified Pseudohongiella → Pseudohongiella sp. O18	0.84 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001536\|A1565W1_10189068	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	10957	Open in IMG/M
3300001538\|A10PFW1_10018823	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1281	Open in IMG/M
3300001661\|JGI12053J15887_10148500	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1232	Open in IMG/M
3300002568\|C688J35102_119981119	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	834	Open in IMG/M
3300002568\|C688J35102_120414688	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1051	Open in IMG/M
3300004018\|Ga0055452_10013100	All Organisms → cellular organisms → Bacteria	2338	Open in IMG/M
3300004021\|Ga0055449_10188656	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	699	Open in IMG/M
3300004081\|Ga0063454_100685000	Not Available	769	Open in IMG/M
3300004081\|Ga0063454_100850031	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → unclassified Amycolatopsis → Amycolatopsis sp. ATCC 39116	713	Open in IMG/M
3300004081\|Ga0063454_101052498	All Organisms → cellular organisms → Bacteria → Proteobacteria	660	Open in IMG/M
3300004114\|Ga0062593_102697155	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	566	Open in IMG/M
3300004480\|Ga0062592_101903549	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	585	Open in IMG/M
3300004480\|Ga0062592_102179364	All Organisms → cellular organisms → Bacteria	551	Open in IMG/M
3300005179\|Ga0066684_10288769	All Organisms → cellular organisms → Bacteria	1087	Open in IMG/M
3300005187\|Ga0066675_10895286	Not Available	671	Open in IMG/M
3300005327\|Ga0070658_10342268	All Organisms → cellular organisms → Bacteria	1279	Open in IMG/M
3300005533\|Ga0070734_10480650	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	708	Open in IMG/M
3300005537\|Ga0070730_10184962	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Pseudohongiella → unclassified Pseudohongiella → Pseudohongiella sp. O18	1397	Open in IMG/M
3300005537\|Ga0070730_10493442	All Organisms → cellular organisms → Bacteria	786	Open in IMG/M
3300005554\|Ga0066661_10530739	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	707	Open in IMG/M
3300005560\|Ga0066670_10371439	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	873	Open in IMG/M
3300005561\|Ga0066699_10425130	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	951	Open in IMG/M
3300005587\|Ga0066654_10141333	All Organisms → cellular organisms → Bacteria	1214	Open in IMG/M
3300005587\|Ga0066654_10168419	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1123	Open in IMG/M
3300005587\|Ga0066654_10268756	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	903	Open in IMG/M
3300005598\|Ga0066706_10483114	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	987	Open in IMG/M
3300005764\|Ga0066903_100024485	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6589	Open in IMG/M
3300005764\|Ga0066903_101897407	Not Available	1141	Open in IMG/M
3300005937\|Ga0081455_10167818	All Organisms → cellular organisms → Bacteria	1675	Open in IMG/M
3300006028\|Ga0070717_11392732	All Organisms → cellular organisms → Bacteria	637	Open in IMG/M
3300006048\|Ga0075363_100655083	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	632	Open in IMG/M
3300006640\|Ga0075527_10014591	All Organisms → cellular organisms → Bacteria	2019	Open in IMG/M
3300006640\|Ga0075527_10034053	All Organisms → cellular organisms → Bacteria	1359	Open in IMG/M
3300006640\|Ga0075527_10059063	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1038	Open in IMG/M
3300006792\|Ga0075530_1001819	Not Available	10036	Open in IMG/M
3300006800\|Ga0066660_10004721	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	6718	Open in IMG/M
3300006800\|Ga0066660_10092137	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2121	Open in IMG/M
3300006845\|Ga0075421_100268784	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	2084	Open in IMG/M
3300006846\|Ga0075430_100354693	Not Available	1211	Open in IMG/M
3300006954\|Ga0079219_11637498	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	592	Open in IMG/M
3300009012\|Ga0066710_100282264	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2421	Open in IMG/M
3300009012\|Ga0066710_100701349	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1543	Open in IMG/M
3300009029\|Ga0066793_10806505	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	533	Open in IMG/M
3300009094\|Ga0111539_10959605	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	994	Open in IMG/M
3300009137\|Ga0066709_100888491	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1298	Open in IMG/M
3300009137\|Ga0066709_104543078	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	507	Open in IMG/M
3300009661\|Ga0105858_1068789	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	919	Open in IMG/M
3300009789\|Ga0126307_10041235	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3584	Open in IMG/M
3300009789\|Ga0126307_10073415	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2695	Open in IMG/M
3300009789\|Ga0126307_10159382	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1808	Open in IMG/M
3300009789\|Ga0126307_11433439	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	560	Open in IMG/M
3300009840\|Ga0126313_11372163	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	585	Open in IMG/M
3300010037\|Ga0126304_11199146	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	520	Open in IMG/M
3300010038\|Ga0126315_10664636	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	677	Open in IMG/M
3300010040\|Ga0126308_11263379	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	524	Open in IMG/M
3300010152\|Ga0126318_10935248	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	537	Open in IMG/M
3300010166\|Ga0126306_10591209	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	884	Open in IMG/M
3300010166\|Ga0126306_10765480	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	777	Open in IMG/M
3300010166\|Ga0126306_11222172	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	618	Open in IMG/M
3300010321\|Ga0134067_10391773	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	555	Open in IMG/M
3300010880\|Ga0126350_12180041	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	502	Open in IMG/M
3300011991\|Ga0120153_1004801	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	4408	Open in IMG/M
3300012011\|Ga0120152_1007329	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	5021	Open in IMG/M
3300012014\|Ga0120159_1078340	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	976	Open in IMG/M
3300012043\|Ga0136631_10299861	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	639	Open in IMG/M
3300012093\|Ga0136632_10336202	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	678	Open in IMG/M
3300012200\|Ga0137382_10571019	Not Available	807	Open in IMG/M
3300012208\|Ga0137376_10762038	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	834	Open in IMG/M
3300012211\|Ga0137377_10250344	All Organisms → cellular organisms → Bacteria	1702	Open in IMG/M
3300012356\|Ga0137371_10582616	All Organisms → cellular organisms → Bacteria	860	Open in IMG/M
3300012531\|Ga0136640_10079606	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1459	Open in IMG/M
3300012684\|Ga0136614_10860190	All Organisms → cellular organisms → Bacteria	630	Open in IMG/M
3300012684\|Ga0136614_11142134	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	530	Open in IMG/M
3300012925\|Ga0137419_11416148	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	587	Open in IMG/M
3300012960\|Ga0164301_11253803	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	598	Open in IMG/M
3300012975\|Ga0134110_10102421	All Organisms → cellular organisms → Bacteria	1158	Open in IMG/M
3300012977\|Ga0134087_10729081	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	529	Open in IMG/M
3300013765\|Ga0120172_1023949	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1750	Open in IMG/M
3300013768\|Ga0120155_1003322	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6358	Open in IMG/M
3300017787\|Ga0183260_10001496	All Organisms → cellular organisms → Bacteria	19396	Open in IMG/M
3300017787\|Ga0183260_10193750	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1428	Open in IMG/M
3300017789\|Ga0136617_10176969	All Organisms → cellular organisms → Bacteria	1809	Open in IMG/M
3300017932\|Ga0187814_10014440	All Organisms → cellular organisms → Bacteria	3034	Open in IMG/M
3300018001\|Ga0187815_10086911	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae	1316	Open in IMG/M
3300018433\|Ga0066667_10230804	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1386	Open in IMG/M
3300018433\|Ga0066667_10447613	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1054	Open in IMG/M
3300018468\|Ga0066662_10008556	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5214	Open in IMG/M
3300018468\|Ga0066662_10031204	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3164	Open in IMG/M
3300018468\|Ga0066662_11015292	All Organisms → cellular organisms → Bacteria	822	Open in IMG/M
3300018469\|Ga0190270_11079394	Not Available	834	Open in IMG/M
3300018481\|Ga0190271_11304896	Not Available	846	Open in IMG/M
3300019887\|Ga0193729_1000962	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	14923	Open in IMG/M
3300021432\|Ga0210384_10303571	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	1437	Open in IMG/M
3300025565\|Ga0210110_1122866	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	616	Open in IMG/M
3300025721\|Ga0209587_1002176	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	8832	Open in IMG/M
3300025721\|Ga0209587_1005673	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4692	Open in IMG/M
3300025721\|Ga0209587_1022927	All Organisms → cellular organisms → Bacteria	1883	Open in IMG/M
3300025802\|Ga0210111_1020938	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1673	Open in IMG/M
3300025919\|Ga0207657_10674378	Not Available	804	Open in IMG/M
3300026308\|Ga0209265_1132439	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	632	Open in IMG/M
3300026548\|Ga0209161_10094992	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1810	Open in IMG/M
3300027383\|Ga0209213_1088167	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	577	Open in IMG/M
3300027561\|Ga0209887_1103980	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	572	Open in IMG/M
3300027684\|Ga0209626_1027373	All Organisms → cellular organisms → Bacteria → Proteobacteria	1383	Open in IMG/M
3300027727\|Ga0209328_10126831	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	779	Open in IMG/M
3300027738\|Ga0208989_10124023	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	874	Open in IMG/M
3300027826\|Ga0209060_10561674	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	517	Open in IMG/M
3300027857\|Ga0209166_10267437	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	905	Open in IMG/M
3300027909\|Ga0209382_10354557	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	1642	Open in IMG/M
3300028819\|Ga0307296_10556585	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	628	Open in IMG/M
3300029943\|Ga0311340_10184532	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2126	Open in IMG/M
3300029951\|Ga0311371_11517671	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	745	Open in IMG/M
3300030503\|Ga0311370_11897665	All Organisms → cellular organisms → Bacteria	600	Open in IMG/M
3300031236\|Ga0302324_100853421	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1259	Open in IMG/M
3300031708\|Ga0310686_107130971	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	829	Open in IMG/M
3300031718\|Ga0307474_10059963	All Organisms → cellular organisms → Bacteria	2816	Open in IMG/M
3300031996\|Ga0308176_11353779	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	757	Open in IMG/M
3300031996\|Ga0308176_12741831	Not Available	524	Open in IMG/M
3300032896\|Ga0335075_11484045	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	565	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.28%
Host-Associated	Host-Associated	6.72%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	80.67%
Aquatic	Environmental → Aquatic	12.61%
Plants	Host-Associated → Plants	6.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	77.31%
Freshwater	Environmental → Aquatic → Freshwater	9.24%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.04%
Marine	Environmental → Aquatic → Marine	3.36%
Peat	Environmental → Terrestrial → Peat	3.36%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.84%
Roots	Host-Associated → Plants → Roots	0.84%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	63.03%
Loam	Environmental → Terrestrial → Soil → Loam	10.92%
Ice	Environmental → Aquatic → Freshwater → Ice	6.72%
Wetlands	Environmental → Aquatic → Marine → Wetlands	3.36%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	3.36%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.36%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.52%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.68%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.68%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.84%
Sand	Environmental → Terrestrial → Soil → Sand	0.84%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.84%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.84%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	26.05%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	18.49%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	11.76%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	6.72%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.88%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	4.20%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	3.36%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.36%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	3.36%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.36%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.68%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.68%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.68%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.68%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.68%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.84%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.84%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.84%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.84%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.84%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.84%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	10.92%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	9.24%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	7.56%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	6.72%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	5.88%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	5.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.04%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.20%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	4.20%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	4.20%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.20%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	3.36%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	3.36%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.36%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.52%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.68%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.68%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.68%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.84%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.84%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.84%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.84%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.84%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.84%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.84%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.84%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.84%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.84%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.84%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001536	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A15-65cm-8A)- 1 week illumina	Environmental	Open in IMG/M
3300001538	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A10-PF 4A)- 1 week illumina	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004018	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - China_Galinas_PWC_D2	Environmental	Open in IMG/M
3300004021	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - China_Galinas_PWB_D1	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005533	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006048	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3	Host-Associated	Open in IMG/M
3300006640	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost305-11B	Environmental	Open in IMG/M
3300006792	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL1-D	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009029	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009661	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-062	Environmental	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010152	Soil microbial communities from Oklahoma, USA to study soil gas exchange rates - GP-OK-ARM metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011991	Permafrost microbial communities from Nunavut, Canada - A34_65cm_12M	Environmental	Open in IMG/M
3300012011	Permafrost microbial communities from Nunavut, Canada - A30_65cm_6M	Environmental	Open in IMG/M
3300012014	Permafrost microbial communities from Nunavut, Canada - A10_80cm_6M	Environmental	Open in IMG/M
3300012043	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ601 (22.06)	Environmental	Open in IMG/M
3300012093	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ611 (21.06)	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012531	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ864 (21.06)	Environmental	Open in IMG/M
3300012684	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ279 (21.06)	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300013765	Permafrost microbial communities from Nunavut, Canada - A30_80cm_6M	Environmental	Open in IMG/M
3300013768	Permafrost microbial communities from Nunavut, Canada - A35_65cm_0M	Environmental	Open in IMG/M
3300017787	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ497 (22.06) (version 2)	Environmental	Open in IMG/M
3300017789	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ322 (21.06)	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300025565	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - China_Galinas_PWB_D1 (SPAdes)	Environmental	Open in IMG/M
3300025721	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL1-D (SPAdes)	Environmental	Open in IMG/M
3300025802	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - China_Galinas_PWC_D2 (SPAdes)	Environmental	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026308	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300027383	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M2 (SPAdes)	Environmental	Open in IMG/M
3300027561	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_30_40 (SPAdes)	Environmental	Open in IMG/M
3300027684	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027727	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027738	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M1 (SPAdes)	Environmental	Open in IMG/M
3300027826	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
A1565W1_101890684	3300001536	Permafrost	MVARRTVPRTRIAPDLYEWSLAMDEHKTRSQIQEHADAVVRGDMDAVTADFSEELRPQVPQIGQALPMPVKAAEVLSVEIGESESVAEIKYSGDSGNVTVRSNWRAIDGRPTIVGAEPI*
A10PFW1_100188231	3300001538	Permafrost	MVARRTVPRTRIAPDLYEWSLAMDEHKTRSQIQEHADAVVRGDMDAVTADFSEELRPQVPQIGQALPMPVKAAEVLSVEIGESESVAEIKYSGDSGNVTVRSNWRAIDG
JGI12053J15887_101485003	3300001661	Forest Soil	MDEASTREHVEKHAVAVEHGDMDAVVADFSKDLRPQVPQIAQVLPQPVTAAEVLSVEVADAEGVALIRYSGDTGEVTIRSRWREEDGRPVIVAAEPAA*
C688J35102_1199811192	3300002568	Soil	MDDQQTRDHIQQHADSVVAGDMDAVVADFTENMRPHVPEIAKALPQPVTAAEVLTVDVGDSESVAKIRYSGEENDVTIRTRWQDEGGRPVIVQAEPAE*
C688J35102_1204146881	3300002568	Soil	MIDEETDMDDQQTRDQIQQHADAVVRGDMDTVVADFTEGMRPHVPEIAKALPQPVTAAEVLSVDVGDSESIAKIRYSGEDSDVTIRTRWQDEGGRPVIVEAEPA*
Ga0055452_100131005	3300004018	Natural And Restored Wetlands	MGDRSMNETRTREHVQGHAEAVERGDMDAVVADFSEELRPQAPEIAKALPQPVTSAEVLSLEVGDDESVALIRYSGDTGEVRIRSRWQDQGGRPVIVGAEPVA*
Ga0055449_101886561	3300004021	Natural And Restored Wetlands	MDDTATRNKIQQHVDAVVRGDMDAAAADFSEDLRPQLPQIAKALPQPVTSAEVLSVEVGEEEAVATIRWTGETGVVTIRSRWQDIGGHPLLVHAEPVD*
Ga0063454_1006850002	3300004081	Soil	MDATRTRRHIQDHADAVVRGDMAAVTADFAAALRPRVPELARALPQPVTAARVLDTEIVDARALATIRYTGTDGEVTIRSYWEEVGDRPVIVAVEPAGADPGRDG*
Ga0063454_1008500311	3300004081	Soil	MDDQQTRDQIQQHADAVVRGDMDTVVGDFTEDLRPQVPEIAKALPQPVTSAEVLSVDVGDTESVARIHYAGDSGEVTIRTRWQDQGGRPYIVQAEQAG*
Ga0063454_1010524982	3300004081	Soil	MDDQQTRDHIQQHADSVVRGDMDAVVADFTEAMRPHVPEIAEALPQPVTAADVLSVEIGETESIATIRYAGQDSEVTIRSRWQDELGRPVIVHAEPAE*
Ga0062593_1026971551	3300004114	Soil	MDEQVVQDHIKQHADAVERGDKDAVVADFAEALQPQVPQITQVLPQPVTRAEVLSVDVGDTESVAVIRYSGDAEEVVVRSRWQEQGGRPVIVHAEPAE*
Ga0062592_1019035491	3300004480	Soil	MDEQVVQDHIKQHADAVERGDKDAVVADFAEALQPQVPQITQVLPQPVTRAEVLSVEVGETESVAVIRYSGDAEEVVVRSRWEEQGGRPVIVHAEPAE*
Ga0062592_1021793642	3300004480	Soil	MDVQVMRDRAKEHADAVARGDVDAVVADFTEALQPQFPQLAQALPQPVTAAEVLSVEVGDTESVALIRYSGDAAEVVVRSRWQEQGGRPVIVHAEPAD*
Ga0066684_102887693	3300005179	Soil	MDEASTREHVTQHADAVARGDIEAVTADFSQALRPQVPQIAQVLPQPVTAADVLSVEVGDAESVALIRYSGEGGDVTVRSRWQQEGGRPVIVAAEPVG*
Ga0066675_108952861	3300005187	Soil	MDERRTRDHVQQHADAVVNGDMDAVLADFSEELRPQVPEIVQVLPQPVTSAVVLSVEIDDPVTVALIRYSGETSAVTVRSEWAEEGGRPVIVSVAPTDEG*
Ga0070658_103422682	3300005327	Corn Rhizosphere	MDDQQTRDHIQQHADAVVRGDMDALTADFTEGMRPHLPEIAKALPQPVTAAEVLSVDVGETESIAIIRYSGEDSDVTIRSRWQDELGRPVIVQAEPAE*
Ga0070734_104806502	3300005533	Surface Soil	MDDQQTRDQIEQHAAAVVRGDMDAVVADFTAGLRPHVPEIARALPQPVTSADLLSVDVGSTESVAMIRYSGQSGGVTVRSRWQDEGGRAVIVHAEPVE*
Ga0070730_101849624	3300005537	Surface Soil	MDEAISRDHIQAHADAVVRADMDAILADFSEGLRPEVPQLAQALPQPVTSADIQSIEIGEDESVSTIRYSGEDSAVTIRARWQEEGGRPVIVHAEPVG*
Ga0070730_104934421	3300005537	Surface Soil	MDETEVRSHVEAHADAVVRGDMDAVTADFAEELRPELPRLAQALPMPVTSADVLSLNVGEDESVAMIRYAGDSGEVTIRSRWQDVTGRPLIVHAEPA*
Ga0066661_105307392	3300005554	Soil	VNEATTRRCIEEHADAVVRGDMDALPADFAEALRPQLPQLAQVLPQPTTSAQIEHVEIGGDESVSTIRYSGDTSAVTIRARWQEEGGRPVIVAAEPVG*
Ga0066670_103714391	3300005560	Soil	MDADNTRGHIEAHADAVVRGDMDAVVADFSEALRPQVPQLAQALPQPTTSAEVQSIEPGEDETVARIRYSGADSAVTIRSHWREEGDRPVIVHAEPVE*
Ga0066699_104251301	3300005561	Soil	MDEASTREHVTQHADAVARGDIEALTADFSQALRPQVPQIAQVLPQPVTAADVLSVEVGDAESVALIRYSGEGGDVTVRSRWQQEGGRPVIVAAEPVG*
Ga0066654_101413332	3300005587	Soil	MDDATTRGHIQSHADAVVRGDMDAVVADFSEALRPQVPQLAQALPQPTTSADVQSIDTGEDETVATIQYSGADSAVTIRSRWRDEGGRPVIVHAEPVG*
Ga0066654_101684192	3300005587	Soil	MDDAKTREHVRRHAESIERGDMDAAVADFSEELRPQVPQIAQELLPLPVSTAEVLSVDVGDAESVARIRYSGDSGEVVIRSRWQDHGGRPLLVSAEPEPAD*
Ga0066654_102687562	3300005587	Soil	VNEATTRRCIEEHADAVVRGDMDALPADFAEALRPQLPQLALALPQPTTSAQIQSVEIGADESVSTIRYSGDDSAVTIRARWQEEGGRPVIVAAEPVG*
Ga0066706_104831142	3300005598	Soil	MDERTTRDHVQQHADAVVNGDMDAVLADFSEELRPQVPEIVKVLPQPVTSAVVLSVEIDDPVTVALIRYSGETSAVTVRSEWAEEGGRPVIVSVAPTDEG*
Ga0066903_1000244858	3300005764	Tropical Forest Soil	MDEQVMRARAEEDADAVARGDVDAVVADFTEALQPQFPQIAQALPQPVTAAEVLSVEVGETESVALIRYSGAADEVVVRSRWQEQDGRPVIVHAEPAE*
Ga0066903_1018974073	3300005764	Tropical Forest Soil	VTSDDATRRTHIQERADAVVRGDTDEVVSHFSEELRPGAPEIVQALPQPVTAAEVLSGEIGDDECIAMIRYSGEDQAVTVRSRREFGGRPLIVHAEPAG*
Ga0081455_101678181	3300005937	Tabebuia Heterophylla Rhizosphere	MAMDEARTRDHIDRHADAVVRGDMDAILADFSEELRPGVPQIVQDVLPQPVTAAEVLSADVGDSEALAMIRYSGDPGEVTIRSRWQEQAGRPVIVHAEPAS*
Ga0070717_113927321	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MDDAKTHKQIQDHADAVARGDMDTAIGDFSEELRPQVPEIAKELPLPVKTAEVLSVDVGAEQSVARIKYTGDGGSVTIETQWRDIGGRPTIVAGKPVG*
Ga0075363_1006550831	3300006048	Populus Endosphere	MDVQVMRDRAKEHADAVARGDVDAVVADFTEALQPQFPQLAQALPQPVTAAEVLSVEVGDTESVALIRYSGDAAEVVVRSRWQEQGWSARDRSRGACRV
Ga0075527_100145914	3300006640	Arctic Peat Soil	MDETKTREHVQAHAEAVERGDMDAVVADFSDELQPQVPEIAKALPQPVTSAEVVSLEVGEGEGVALIRYSGDTGEVTIRSRWQDQGGRPVIVAVEPAG*
Ga0075527_100340533	3300006640	Arctic Peat Soil	MDETRTREHVQGHAEAVERGDMDAVVADFSEELQPQVPEIAKALPQPVTSAKVLSLEVGDSESVALIRYSGDSGDVTIRSRWQDQGERPVVVAAEPAG*
Ga0075527_100590632	3300006640	Arctic Peat Soil	MDESQTRDQVKQHADAVLRGDMDAVVADFAEDLRPQVPQIAQGLPQPVTGVEVLSVDVGDTESVAMIRYSGDTGDVTIRSRWQDQSGRPVIVHAEPAE*
Ga0075530_10018195	3300006792	Arctic Peat Soil	MDETKTREHVQAHAEAVERGDMDAVVADFSKELQPQVPEIAKALPQPVTSAEVVSLEVGEGEGVALIRYSGDTGEVTIRSRWQDQGGRPVIVAVEPAG*
Ga0066660_100047211	3300006800	Soil	TSARQHIHQHADAVVRGDMDAVVADFSEELRPQVPQIAQALPQPVTAAEVLSIDVGDTESVAMIRYAGEASEVTIRSQWQDQGGRPVIVAAEPAG*
Ga0066660_100921372	3300006800	Soil	VDEATTRRCIEEHADAVVRGDMDALPADFAEALRPQLPQLAQVLPQPTTSAQIENVEIGGVESVSTIRYSGDTSAVTIRARWQEEGGRPVIVAAEPVG*
Ga0075421_1002687843	3300006845	Populus Rhizosphere	MDEAQTRDYINEHADAVVRKDMDAILADFSEELRPGAPHIVNEVLPQPVTGAEVLSIDVGDSEAVAMIRYSGDGELTVRSRWQEEAGRPVIVHAEPAS*
Ga0075430_1003546934	3300006846	Populus Rhizosphere	QPTGGERIVGESGRTEGVAMDEAQTRDYINEHADAVVRKDMDAILADFSEELRPGAPHIVNEVLPQPVTGAEVLSIDVGDSEAVAMIRYSGDGELTVRSRWQEEAGRPVIVHAEPAS*
Ga0079219_116374982	3300006954	Agricultural Soil	MDDQQTRDHIQQHADSVVRGDMDAIIADFTEGMRPHVPEIAKALPQPVTAADVLGVDVGEAESTATIRYSGEDSEVTIRS
Ga0066710_1002822644	3300009012	Grasslands Soil	MDEASTREHVTQHADAVARADIEAVTADFSQALRPQVPQIAQVLPQPVTAADVLSVEVGDAESVALIRYSGEGGDVTVRSRWQQEGGRPVIVAAEPVG
Ga0066710_1007013492	3300009012	Grasslands Soil	MDDATTRDHIQKHADAVVRGDMDAVVTDFTEELRPQVPQIAQALLPQPPVTKAEVLSVDIGDPVSQAMIRYTGSSGAVTIRSDWQDEGGRPVIVHAEPAS
Ga0066793_108065051	3300009029	Prmafrost Soil	MDEATTRNHIQQHADAVVRGDMDAVVADFSEELRPQVPQLAQALPQPVTSAEVLSVEIADPESVATIRYSGATAAVTIRSRWQDIGGRPVIVHAEPAA*
Ga0111539_109596051	3300009094	Populus Rhizosphere	MDEQVMRDRAKEHADAVARGDVDAVVADFTEALQPQFPEIAKVLPQPVTAAEVLSVEVGDTESVALIRYSGDAEAVVVRSRWQEQDGRPVIVHVEPAE*
Ga0066709_1008884912	3300009137	Grasslands Soil	MDDARTREQVTAHAAAAERGDVDSVVADFSESMRPQVPQLVQALPQPVTRAEVLSVDVGEAESVAMIRYAGDSGEVTVRSRWQEQGGRPVIVAAEPAG*
Ga0066709_1045430781	3300009137	Grasslands Soil	EKHAVAVERGDMDALVADFKRDLRPQVPQIAQVLPQPVTSADVLSVEIGDPESVALIRYSGDTGEVTVRSRWQEEDGRPVIFAAEPAS*
Ga0105858_10687892	3300009661	Permafrost Soil	MDEATTRDHIQKHADAVVRGDMDAVTADFSEELRPQLPQLGRALPRPVIAAEVLSVEIGDPVSVAMIRYSGADGEVTIRSGWQEEGGRPVIVQAAPAD*
Ga0126307_100412352	3300009789	Serpentine Soil	MDDQQARDHITQHAEAVVRGDMDAVMADFNTDLRPRVPELVQGLPRPVTSADVLSVEVGETESVAMIRYAGDTGEITVRSRWQDGGGRPLIVHAEPAE*
Ga0126307_100734153	3300009789	Serpentine Soil	MDDQQAREHVKQHADSVVRGDMDAVVADFSDDLRPHVPELVQSLPQPVTRADVLSVDVGETASVAMIRYAGDTGEVTVRSRWQEQGGRPVIVHAEPAA*
Ga0126307_101593822	3300009789	Serpentine Soil	MDEAQIRDHINQHADTVLRGDMDAIVADFTEDLRPGVPQIVQEVLPQPVTAAEVLDIDVGDSETVAMIRYSGDAGEVTIRSRWQEQAGRPVIVHAEPTADTALGG*
Ga0126307_114334391	3300009789	Serpentine Soil	LDEAQTHDHINQHADAVVRGDMDAIRADFSDELRPGASQIVNEVLPQPVTGAEVLNIDVGDSEAVAMIRYSGDGELTVRSRWQEEAGRPVIVHAEPVG*
Ga0126313_113721631	3300009840	Serpentine Soil	MDEAQIRDHTNRHADAVTRGDMDAIVADFSEELRPGVPQIVQEVLPQPVTAAEVLDLDVGDSEAVAIIRYSGGTGEVTIRSRWQEQAGRPVIVHAEPTS*
Ga0126304_111991461	3300010037	Serpentine Soil	DAVARGDMEAAVADFSEQLRPQAPQVAQDLLPLPVTAAEVVSVDMGDSEAVALIRYSGDGEVTVRTRWQEEAGRPVIVHAEPTS*
Ga0126315_106646361	3300010038	Serpentine Soil	MDEAQIRDHTNQHADAVVRGDMDAIVADFSEELRPSVPQIVQDVLPQPVTGAEVLDIGVGDSETVAMIRYSGDADEVTIRSRWQEQGGRPVIVHAEPTS*
Ga0126308_112633791	3300010040	Serpentine Soil	MDEAQIRDHTNQHADAVVRGDMDAIVADFSEELRPGVPQIVQDVLPQPVTAAEVLDIDVGDSEAVAMIRYSGDAGEVTIRSRWQEQAGR
Ga0126318_109352482	3300010152	Soil	TRDHIEAHADAVVRADMDAILADFSEGLRPEVPQLAQALPQPVTSADIQNIEIGGEDSVSTIRYSGQDSAVTIRPRWQEEGGQPVIVHAEPVG*
Ga0126306_105912092	3300010166	Serpentine Soil	MDEEQVRDHVRQHADAVARGDMEAAVADFSEQLRPQAPQVAQDLLPLPVTAAEVVSVDMGDSEAVALIRYSGDGEVTVRTRWQEEAGRPVIVHAEPTS*
Ga0126306_107654802	3300010166	Serpentine Soil	MDEAQSRDHINQHADAVVRGDMDAIRADFSDELRPGASQIVNEVLPQPVTGAEVLNIDVGDSEAVAMIRYSGDGELTVRSRWQEEAGRPVIVHAEPVG*
Ga0126306_112221721	3300010166	Serpentine Soil	NQHADAVVRGDIDAILADFSEELRPGAPQIVNEVLPQPVTAAKVLNIDVGDSETVAMIRYSGDGELTVRSRWQEQAGRPVIVHAEPVS*
Ga0134067_103917731	3300010321	Grasslands Soil	AVERGDVDSVVADFSESMRPQVPQLAQALPQPVTRAEVLSVDVGEAESVARIRYAGDSGEVTVRSRWQEQGGRPVIVAAEPAG*
Ga0126350_121800412	3300010880	Boreal Forest Soil	MDDQQTRDHIQQHADAVVRGDMDAVVADFTESMRPHVPQIAQALPLPVTAAEVLSVDVGDTETVATICYTGAPGDVTIRSRWQDEAGRPVIVHAEPAG*
Ga0120153_10048011	3300011991	Permafrost	MVARRTVPRTRIAPDLYEWSLAMDEHKTRSQIQEHADAVVRGDMDAVTADFSEELRPQVPQIGQALPMPVKAAEVLSVEIGESESVAEIKYFGDSGNVTVRSHW
Ga0120152_10073294	3300012011	Permafrost	MVARRTVPRTRIAPDLYEWSLAMDEHKTRSQIQEHADAVVRGDMDAVTADFSEELRPQVPQIGQALPMPVKAAEVLSVEIGESESVAEIKYSGDSGNVTVRSHWRAIDGRPTIVGAEPI*
Ga0120159_10783401	3300012014	Permafrost	MDEHQTRSQIQEHADAVVRGDMDAVTADFSEELRPQVPQIGQALPMPVKAAEVLSVEIGESESVAEIKYSGDSGNVTVRSHWRAIDGRP
Ga0136631_102998611	3300012043	Polar Desert Sand	MDEATTRDHVQKHADAVVRGDMDAVVADYSEELRPQLRQIAQALPRPVTSAEVLSVDTGDPVSVAMIRYSGDSGGVTIRSHWQVQGGRPVIVEVAPAD*
Ga0136632_103362022	3300012093	Polar Desert Sand	MDDQQTRDHIKHHADAVVRGDMDAVVADFTEGLQPHVPEIAQALPQPVTGADVLSVDVGDTESVAMIRYSGDTGDVTIRSRWRDEGGRPVIVH
Ga0137382_105710192	3300012200	Vadose Zone Soil	MDEATTRDQIQKHADAVVRGDMDAILADFCEELRPQAPQIAQSLPQPVTKAEVLSVDVGDPVSQAMIRYTGSSGAVTIRSNWQ
Ga0137376_107620382	3300012208	Vadose Zone Soil	MEETVDETVIRDHVEKHAVAIERGDMDAAVADFKKDLRPQVPQIAQVLPQPVRSAEVLSVEIGDPESVAMIRYSGDTGEVTVRSRWQEEDGRPVIFTAEPAS*
Ga0137377_102503442	3300012211	Vadose Zone Soil	MLDETRTRDHVGEHADAVKRGDMDAVVADFTEDLRPQVPQLAQALPLPVTAADVMSLEVGDAESVALIRYAGDSGEVTIRSRWQEEAERPLIVAAEPAV*
Ga0137371_105826162	3300012356	Vadose Zone Soil	MEEAVDETVIRDHVEKHAVAVERGDMDAVVADFGKDLRPQVPQIAQVLPQPVRSAEVLSVEIGDPESVALIRYSGDTGEVTVRSRWQEEDGRPVIFAAEHAS*
Ga0136640_100796062	3300012531	Polar Desert Sand	MDDQQTRDHIKQHADAVVRGDMDAVVADFTEGLQPHVPEIAQALPQPVTGADVLSVDVGDTESVAMIRYSGDTGDVTIRSRWQDEGGRPVIVHAEPAE*
Ga0136614_108601902	3300012684	Polar Desert Sand	SQEVNVDDRKTRKHVQAHADAVVRGDMDAVTADFSEELRPQVPQLAQLLPHPVTTAEVVSLHVEEAESVATIRYLGDSGKVTLRTRWQDHGRHPVIVEVEPVT*
Ga0136614_111421341	3300012684	Polar Desert Sand	TRRSDMDDQQTRDHIKHHADAVVRGDMDAVVADFTEGLQPHVPEIAQALPQPVTGADVLSVDVGDTESVAMIRYSGDTGDVTIRSRWRDEGGRPVIVHAEPAE*
Ga0137419_114161481	3300012925	Vadose Zone Soil	MDEASTREHVEKHAAAVEHGDMDAVVADFSKDLRPQVPQIAQVLPQPVTVAEVLSVEIAGAESVALIRYSGDTGEVTIRSRWREEDGRPVIVAAEPAT*
Ga0164301_112538031	3300012960	Soil	DMDDQQTRDQIQQPADAVVRGDMDAVVADFTEGMRPHVPEIAKALPQPVTAAEVLSVDVGDSESIAKIRYSGEDSEVTIRTRWQDEGGRPVIVEAEPA*
Ga0134110_101024211	3300012975	Grasslands Soil	MEAVGSDVACLAQCGVDDLQGCRREHVTQHADAVARGDIEAVTADFSQALRPQVPQIAQVLPHPVTAADVLSVEVGDAESVALIRYSGEGGDVTVRSRWQQEGGRPVIVAAEPVG*
Ga0134087_107290811	3300012977	Grasslands Soil	QHADAVVNGDMDTVLADFSEELRPQVPQIVQVLPQPVTSAELLSIEIDDPVTVALIRYSGETSAVTVRSEWAEEGGRPVIVSVAPTDEG*
Ga0120172_10239492	3300013765	Permafrost	MDEHKTRSQIQEHADAVVRGDMDAVTADFSEELRPQVPQIGQALPMPVKAAEVLSVEIGESESVAEIKYSGDSGNVTVRSHWRAIDGRPTIVGAEPI*
Ga0120155_10033228	3300013768	Permafrost	MDEHKTRSQIQEHADAVVRGDMDAVTADFSEELRPQVPQIGQALPMPVKAAEVLSVEIGESESVAEIKYSGDSGNVTVRSNWRAIDGRPTIVGAEPI*
Ga0183260_1000149612	3300017787	Polar Desert Sand	MDETTIRDHAQAHADAVVNGDMDAITEDFAEELRPQLREIARALPRPVTGAEVMSIETGDPVSVALIRYAGETGGVTIRSEWQEEDGRPRIVKAEPASDPD
Ga0183260_101937502	3300017787	Polar Desert Sand	MDDQQTRDHIKQHADAVVRGDMDAIVADFTEGLQPHVPEIAQALPQPVTGADVLSVDVGDTESVAMIRYSGDTGDVTIRSRWQDEGGRPVIVHAEPAE
Ga0136617_101769693	3300017789	Polar Desert Sand	MDETTIRDHAQAHADAVVSGDMDAITEDFAEELRPQLREIARALPRPVTGAEVMSIETGDPVSVALIRYAGETGAVTIRSEWQEEDGRPRIVKAEPASDPD
Ga0187814_100144403	3300017932	Freshwater Sediment	MPAVFGSDHINQHADAVVRGDMDAVVADFTENLQPHVPQIAQGLPQPVTAAEVLSVDVGDTESVAMICYSGDAGDVTIRSRWPNEGGRSVIMHAEPAG
Ga0187815_100869112	3300018001	Freshwater Sediment	MPAVFGSDHINQHADAVVRGDMDAVVADFTENLQPHVPQIAQGLPQPVTAAEVLSVDVGDTESVAMICYSGDAGDVTIRSRWRNEGGRPVIVHAEPAG
Ga0066667_102308043	3300018433	Grasslands Soil	MDEASTREHVTQHADAVARGDIEAVTADFSQALRPQVPQIAQVLPQPVTAADVLSVEVGDAESVALIRYSGEGGDVTVRSRWQQEGGRPVIVAAEPVG
Ga0066667_104476132	3300018433	Grasslands Soil	MDERRTRDHVQQHADAVVNGDMDTVLADFSEELRPQVPQIVQVLPQPVTSAELLSIEIDDPVTVALIRYSGETSAVTVRSEWAEEGGRPVIVSVAPTDEG
Ga0066662_100085566	3300018468	Grasslands Soil	MDETSARQHIHQHADAVVRGDMDAVVADFSEELRPQVPQIAQALPQPVTAAEVLSIDVGDTESVAMIRYAGEASEVTIRSQWQDQGGRPVIVAAEPAG
Ga0066662_100312042	3300018468	Grasslands Soil	VDEATTRRCIEEHADAVVRGDMDALPADFAEALRPQLPQLAQVLPQPTTSAQIENVEIGGDESVSTIRYSGDTSAVTIRARWQEEGGRPVIVAAEPVG
Ga0066662_110152922	3300018468	Grasslands Soil	MDEAATRGHIKAHADAVVRGDMDAVLSDFSEELRPEVPQLAQALPQPTTSAEVQNIDIGEDESVSTIRYSGQESAVTIRARWRDESGRPVIVHAEPVG
Ga0190270_110793942	3300018469	Soil	MDEAQARDHINQHADAVVRGDMDAILADFSEELRPGAPQIVNEVLPQPVSVAEVLDVDVGDSAAVAMIRYSGDGELTVR
Ga0190271_113048962	3300018481	Soil	MDEAQTRDYINEHADAVVRKDMDAILADFSEELRPGAPHIVNEVLPQPVTGAEVLSIDVGNSEAVAMIRYSGDGELTVRSRWQEEAGRPVIVHAEPAS
Ga0193729_10009628	3300019887	Soil	MDETRTRDHVKQHAAAVERGEMDAVAADFTEDLRPQLPKIAQVLPLPVTSAEVLSVEMGDAESVALIRYSGDSGEVTIRSRWQDQAGRPLIVGVEPVG
Ga0210384_103035711	3300021432	Soil	MDAEITREHIRNHAVAVELGDMDAVVLDFTTDLQPQVPQIAQALPRPVTAAEVLSVEIGDTECVALIRYSGDTEEVTIRSRWQEEGGRPVIVAAEPAA
Ga0210110_11228661	3300025565	Natural And Restored Wetlands	MDDTATRNKIQQHVDAVVRGDMDAAAADFSEDLRPQLPQIAKALPQPVTSAEVLSVEVGEEEAVATIRWTGETGVVTIRSRWQDIGGHPLLVHAEPVD
Ga0209587_10021766	3300025721	Arctic Peat Soil	MDETKTREHVQAHAEAVERGEMDAVVADFSEELQPQVPEIAKALPQPVTSAEVVSLEVGEGEGVALIRYSGDTGEVTIRSRWQDQGGRPVIVAVEPAG
Ga0209587_10056733	3300025721	Arctic Peat Soil	MDETRTREHVQGHAEAVERGDMDAVVADFSEELQPQVPEIAKALPQPVTSAKVLSLEVGDSESVALIRYSGDSGDVTIRSRWQDQGERPVVVAAEPAG
Ga0209587_10229274	3300025721	Arctic Peat Soil	MDESQTRDQVKQHADAVLRGDMDAVVADFAEDLRPQVPQIAQGLPQPVTGVEVLSVDVGDTESVAMIRYSGDTGDVTIRSRWQDQSGRPVIVHAEPAE
Ga0210111_10209382	3300025802	Natural And Restored Wetlands	MNETRTREHVQGHAEAVERGDMDAVVADFSEELRPQAPEIAKALPQPVTSAEVLSLEVGDDESVALIRYSGDTGEVRIRSRWQDQGGRPVIVGAEPVA
Ga0207657_106743782	3300025919	Corn Rhizosphere	MDDQQTRDHIQQHADAVVRGDMDALTADFTEGMRPHLPEIAKALPQPVTAAEVLSVDVGETESIAIIRYSGEDSDVTIRSRWQDELGRPVIVQAEPAE
Ga0209265_11324392	3300026308	Soil	MDDAKTREHVRRHAESIERGDMDAAVADFSEELRPQVPQIAQELLPLPVSTAEVLSVDVGDAESVARIRYSGDSGEVVIRSRWQDHGGRPLLVSAEPEPAD
Ga0209161_100949922	3300026548	Soil	MDEASTREHVTQHADAVARGDIEALTADFSQALRPQVPQIAQVLPQPVTAADVLSVEVGDAESVALIRYSGEGGDVTVRSRWQQEGGRPVIVAAEPVG
Ga0209213_10881672	3300027383	Forest Soil	MDEASTREHVEKHAVAVEHGDMDAVVADFSKDLRPQVPQIAQVLPQPVTAAEVLSVEVADAEGVALIRYSGDTGEVTIRSRWREEDGRPVIVA
Ga0209887_11039801	3300027561	Groundwater Sand	GEAMDQAQTHDHINHHADAVVRGDMDAVVAHFSEDLRPRVPQIVQALSQPVTAADVLSIEVGDPETVAMIRYSGDTGEVTIRSRWQEQGGRPVIVHAEPAS
Ga0209626_10273732	3300027684	Forest Soil	MDETATREHIEAHADAVVRGDMDAVLGDFSEQLRPEVPQLAQALPQPVMSADIQNIDIGDDESVSTIRYSGQESAVTIRARWQDEGGRPVIVHAEPVS
Ga0209328_101268311	3300027727	Forest Soil	MDETTTRDQIQKHADAVVRGDMATVTADFSEELRPRVPQLAQALPQPVTSAEVLSVEISDPMSTAMIRYSGTSGAVTIRSNWEDEGGRPVIVHVEPAG
Ga0208989_101240232	3300027738	Forest Soil	MDEASTREHVEKHAVAVEHGDMDAVVADFSKDLRPQVPQIAQVLPQPVTAAEVLSVEVADAEGVALIRYSGDTGEVTIRSRWREEDGRPVIVAAEPAA
Ga0209060_105616742	3300027826	Surface Soil	MGRSACADLPSTDQVQQSVEQHAAAVVRGDMDAVVADFTAGLRPHVPEIARALPQPVTSADLLSVDVGSTESVAMIRYSGQSGGVTVRSRWQDEGGRAVIVHAEPVE
Ga0209166_102674372	3300027857	Surface Soil	MDETEVRSHVEAHADAVVRGDMDAVTADFAEELRPELPRLAQALPMPVTSADVLSLNVGEDESVAMIRYAGDSGEVTIRSRWQDVTGRPLIVHAEPA
Ga0209382_103545572	3300027909	Populus Rhizosphere	MDEAQTRDYINEHADAVVRKDMDAILADFSEELRPGAPHIVNEVLPQPVTGAEVLSIDVGDSEAVAMIRYSGDGELTVRSRWQEEAGRPVIVHAEPAS
Ga0307296_105565851	3300028819	Soil	MDEATIRDHVQKHADAVVSGDIKAVTEDFTEEMRPQVPQIAGSLPQPITSAEVLSVEPGDPSVAMIKYTGESGEVTIRSQWQDEDGRPRIIAGEPVG
Ga0311340_101845323	3300029943	Palsa	MDEDTTRTQIHEHADAVVRGDMETVISDFSEELRPQVPQLAQALPQPITSADVLSLEVGGEESVATIRYAGDSAEVTIRSHWRDVGGRPVIVHAEPVG
Ga0311371_115176712	3300029951	Palsa	MDEDTTRTQIHEHADAVVRGDMETVISDFSEELRPQVPQLAQALPQPVTSADVLSLEVGGEESVATIRYAGDSAEVTIRSHWRDVGGRPVIVHAEPVG
Ga0311370_118976652	3300030503	Palsa	MDEDTTRTQIHEHADAVVRGDMETVISDFSEELRPQVPQLAQALPQPVTSADVLSLEVGGEESVATIRYAGDSAEVTIRSHWRDVGGRPVIVHAEP
Ga0302324_1008534211	3300031236	Palsa	GAEMDEDTTRTQIHEHADAVVRGDMETVISDFSEELRPQVPQLAQALPQPVTSADVLSLEVGGEESVATIRYAGDSAEVTIRSHWRDVGGRPVIVHAEPVG
Ga0310686_1071309711	3300031708	Soil	MDEQQTRDRIEQHADAVVRGDMDTVVADFTEGLQPHVPEIAKALPQPVRSAEVLSLDVGDTESVAMIRYSGNTGGVTIRSRWQDEGGRAVIVHAESAE
Ga0307474_100599632	3300031718	Hardwood Forest Soil	MDEASTRKHVAQHADSVKRGDMDAVVADFSEQLRPHVPGLAQMLPQPVELAEVLSAEVGEHECVALIHYSGGTGEVTIRSRWQEEGGRPVIVAAEPAA
Ga0308176_113537792	3300031996	Soil	MDDQQTRDHIQQHADSVVRGDMDAVVADFTEGMRPHVPEIAKALPQPVTAAEVLSVDVGDTESVATIRYSGEENNVTIRSRWQDEGGRPVIVQAEPA
Ga0308176_127418312	3300031996	Soil	DAVVRGDMDAVVADFAEAMRPHVPEIAKALPQPVTGADILNVEIGEAESISTIRYSGQDSDVTIRARWQDELGRPVIVQAEPAG
Ga0335075_114840451	3300032896	Soil	MDDRQTRGQVKQHADAVVRGDMAAVVADFTEGLQPQVPEIAKALPQPVTSADVLSVDVGDSESIAMIRYSGDTSEITIRSRWRDEGGRAVIVHAEPAE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F074799

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences