NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F074709

Metagenome Family F074709

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F074709
Family Type Metagenome
Number of Sequences 119
Average Sequence Length 80 residues
Representative Sequence YDEKVTYDTTIRTVSGNQICDITNVKNAAGDAKSEVSPGEAKFVVIAVGVTLPAVGTPNTTGYQPASQVQLTSDVVLRNSIVY
Number of Associated Samples 92
Number of Associated Scaffolds 119

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 98.32 %
% of genes from short scaffolds (< 2000 bps) 91.60 %
Associated GOLD sequencing projects 83
AlphaFold2 3D model prediction Yes
3D model pTM-score0.46

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (98.319 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere
(11.765 % of family members)
Environment Ontology (ENVO) Unclassified
(54.622 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(73.950 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 2.70%    β-sheet: 34.23%    Coil/Unstructured: 63.06%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.46
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 119 Family Scaffolds
PF13181TPR_8 0.84
PF14341PilX_N 0.84
PF00069Pkinase 0.84
PF07719TPR_2 0.84

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 119 Family Scaffolds
COG0515Serine/threonine protein kinaseSignal transduction mechanisms [T] 3.36

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms98.32 %
UnclassifiedrootN/A1.68 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2228664021|ICCgaii200_c0855488All Organisms → cellular organisms → Bacteria733Open in IMG/M
3300000033|ICChiseqgaiiDRAFT_c0891703All Organisms → cellular organisms → Bacteria1064Open in IMG/M
3300000364|INPhiseqgaiiFebDRAFT_105457127All Organisms → cellular organisms → Bacteria910Open in IMG/M
3300000891|JGI10214J12806_11265970All Organisms → cellular organisms → Bacteria1540Open in IMG/M
3300000956|JGI10216J12902_102415681All Organisms → cellular organisms → Bacteria1845Open in IMG/M
3300003267|soilL1_10048654All Organisms → cellular organisms → Bacteria1715Open in IMG/M
3300003324|soilH2_10109652All Organisms → cellular organisms → Bacteria2297Open in IMG/M
3300004480|Ga0062592_100327199All Organisms → cellular organisms → Bacteria1177Open in IMG/M
3300004480|Ga0062592_100581670All Organisms → cellular organisms → Bacteria947Open in IMG/M
3300005093|Ga0062594_102657486All Organisms → cellular organisms → Bacteria553Open in IMG/M
3300005290|Ga0065712_10590056All Organisms → cellular organisms → Bacteria593Open in IMG/M
3300005293|Ga0065715_10163745All Organisms → cellular organisms → Bacteria1605Open in IMG/M
3300005293|Ga0065715_10907334All Organisms → cellular organisms → Bacteria572Open in IMG/M
3300005331|Ga0070670_100049274All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia3622Open in IMG/M
3300005331|Ga0070670_100320931All Organisms → cellular organisms → Bacteria1357Open in IMG/M
3300005332|Ga0066388_108161638All Organisms → cellular organisms → Bacteria523Open in IMG/M
3300005333|Ga0070677_10683373All Organisms → cellular organisms → Bacteria576Open in IMG/M
3300005334|Ga0068869_100487522All Organisms → cellular organisms → Bacteria1027Open in IMG/M
3300005334|Ga0068869_100843304All Organisms → cellular organisms → Bacteria790Open in IMG/M
3300005345|Ga0070692_10050201All Organisms → cellular organisms → Bacteria2166Open in IMG/M
3300005354|Ga0070675_101756127All Organisms → cellular organisms → Bacteria572Open in IMG/M
3300005355|Ga0070671_100750532All Organisms → cellular organisms → Bacteria848Open in IMG/M
3300005364|Ga0070673_100225758All Organisms → cellular organisms → Bacteria1623Open in IMG/M
3300005364|Ga0070673_101045301All Organisms → cellular organisms → Bacteria761Open in IMG/M
3300005365|Ga0070688_101188379All Organisms → cellular organisms → Bacteria612Open in IMG/M
3300005440|Ga0070705_101169855All Organisms → cellular organisms → Bacteria632Open in IMG/M
3300005440|Ga0070705_101752842All Organisms → cellular organisms → Bacteria526Open in IMG/M
3300005444|Ga0070694_100020952All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria4172Open in IMG/M
3300005444|Ga0070694_100288246All Organisms → cellular organisms → Bacteria1254Open in IMG/M
3300005444|Ga0070694_100564677All Organisms → cellular organisms → Bacteria912Open in IMG/M
3300005459|Ga0068867_102158887All Organisms → cellular organisms → Bacteria528Open in IMG/M
3300005466|Ga0070685_10753928All Organisms → cellular organisms → Bacteria714Open in IMG/M
3300005468|Ga0070707_101802851All Organisms → cellular organisms → Bacteria579Open in IMG/M
3300005518|Ga0070699_100473668All Organisms → cellular organisms → Bacteria1136Open in IMG/M
3300005518|Ga0070699_102089443All Organisms → cellular organisms → Bacteria517Open in IMG/M
3300005535|Ga0070684_101765147All Organisms → cellular organisms → Bacteria584Open in IMG/M
3300005539|Ga0068853_101989888All Organisms → cellular organisms → Bacteria563Open in IMG/M
3300005545|Ga0070695_100209287All Organisms → cellular organisms → Bacteria1399Open in IMG/M
3300005547|Ga0070693_100257754All Organisms → cellular organisms → Bacteria1159Open in IMG/M
3300005547|Ga0070693_101648283All Organisms → cellular organisms → Bacteria505Open in IMG/M
3300005563|Ga0068855_100465437All Organisms → cellular organisms → Bacteria1378Open in IMG/M
3300005577|Ga0068857_101214231All Organisms → cellular organisms → Bacteria730Open in IMG/M
3300005578|Ga0068854_101206540All Organisms → cellular organisms → Bacteria678Open in IMG/M
3300005615|Ga0070702_100026798All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia3102Open in IMG/M
3300005618|Ga0068864_100305933All Organisms → cellular organisms → Bacteria1489Open in IMG/M
3300005618|Ga0068864_100356951All Organisms → cellular organisms → Bacteria1380Open in IMG/M
3300005618|Ga0068864_102013132All Organisms → cellular organisms → Bacteria584Open in IMG/M
3300005618|Ga0068864_102478441All Organisms → cellular organisms → Bacteria525Open in IMG/M
3300005840|Ga0068870_10052397All Organisms → cellular organisms → Bacteria2164Open in IMG/M
3300005841|Ga0068863_100435892All Organisms → cellular organisms → Bacteria1285Open in IMG/M
3300005841|Ga0068863_102136867All Organisms → cellular organisms → Bacteria570Open in IMG/M
3300005842|Ga0068858_100495785All Organisms → cellular organisms → Bacteria1180Open in IMG/M
3300005842|Ga0068858_101791152All Organisms → cellular organisms → Bacteria607Open in IMG/M
3300005886|Ga0075286_1008427All Organisms → cellular organisms → Bacteria1193Open in IMG/M
3300005937|Ga0081455_10973890All Organisms → cellular organisms → Bacteria525Open in IMG/M
3300006755|Ga0079222_11946947All Organisms → cellular organisms → Bacteria575Open in IMG/M
3300006844|Ga0075428_100544685All Organisms → cellular organisms → Bacteria1240Open in IMG/M
3300006845|Ga0075421_100318477All Organisms → cellular organisms → Bacteria1886Open in IMG/M
3300006854|Ga0075425_100573531All Organisms → cellular organisms → Bacteria1298Open in IMG/M
3300006871|Ga0075434_100829027All Organisms → cellular organisms → Bacteria941Open in IMG/M
3300006880|Ga0075429_101296625All Organisms → cellular organisms → Bacteria635Open in IMG/M
3300009093|Ga0105240_11542634All Organisms → cellular organisms → Bacteria696Open in IMG/M
3300009094|Ga0111539_13015165All Organisms → cellular organisms → Bacteria544Open in IMG/M
3300009147|Ga0114129_10843398All Organisms → cellular organisms → Bacteria1166Open in IMG/M
3300009147|Ga0114129_12088228All Organisms → cellular organisms → Bacteria684Open in IMG/M
3300009174|Ga0105241_10451663All Organisms → cellular organisms → Bacteria1137Open in IMG/M
3300009174|Ga0105241_11088509All Organisms → cellular organisms → Bacteria752Open in IMG/M
3300009174|Ga0105241_11940932All Organisms → cellular organisms → Bacteria578Open in IMG/M
3300009174|Ga0105241_12321194All Organisms → cellular organisms → Bacteria534Open in IMG/M
3300009177|Ga0105248_12792959All Organisms → cellular organisms → Bacteria557Open in IMG/M
3300009545|Ga0105237_12440038All Organisms → cellular organisms → Bacteria533Open in IMG/M
3300009553|Ga0105249_10624183All Organisms → cellular organisms → Bacteria1134Open in IMG/M
3300010040|Ga0126308_10072073All Organisms → cellular organisms → Bacteria2060Open in IMG/M
3300010047|Ga0126382_11906085All Organisms → cellular organisms → Bacteria562Open in IMG/M
3300010047|Ga0126382_12258443All Organisms → cellular organisms → Bacteria525Open in IMG/M
3300010166|Ga0126306_11824886All Organisms → cellular organisms → Bacteria509Open in IMG/M
3300010375|Ga0105239_11437841All Organisms → cellular organisms → Bacteria796Open in IMG/M
3300010397|Ga0134124_10313768All Organisms → cellular organisms → Bacteria1465Open in IMG/M
3300010397|Ga0134124_12011234All Organisms → cellular organisms → Bacteria615Open in IMG/M
3300010399|Ga0134127_10674409All Organisms → cellular organisms → Bacteria1071Open in IMG/M
3300010400|Ga0134122_12349066All Organisms → cellular organisms → Bacteria580Open in IMG/M
3300010400|Ga0134122_12572330All Organisms → cellular organisms → Bacteria559Open in IMG/M
3300012957|Ga0164303_10316513All Organisms → cellular organisms → Bacteria927Open in IMG/M
3300013100|Ga0157373_10824594All Organisms → cellular organisms → Bacteria685Open in IMG/M
3300013296|Ga0157374_12233702All Organisms → cellular organisms → Bacteria574Open in IMG/M
3300013297|Ga0157378_13223007All Organisms → cellular organisms → Bacteria507Open in IMG/M
3300013306|Ga0163162_10270868All Organisms → cellular organisms → Bacteria1830Open in IMG/M
3300013306|Ga0163162_13333045All Organisms → cellular organisms → Bacteria514Open in IMG/M
3300013308|Ga0157375_12431426All Organisms → cellular organisms → Bacteria625Open in IMG/M
3300014325|Ga0163163_11082082All Organisms → cellular organisms → Bacteria865Open in IMG/M
3300015371|Ga0132258_12382790All Organisms → cellular organisms → Bacteria1326Open in IMG/M
3300015371|Ga0132258_13463723All Organisms → cellular organisms → Bacteria1082Open in IMG/M
3300025315|Ga0207697_10281253All Organisms → cellular organisms → Bacteria737Open in IMG/M
3300025904|Ga0207647_10519552All Organisms → cellular organisms → Bacteria662Open in IMG/M
3300025920|Ga0207649_10210942All Organisms → cellular organisms → Bacteria1378Open in IMG/M
3300025922|Ga0207646_10520575All Organisms → cellular organisms → Bacteria1071Open in IMG/M
3300025925|Ga0207650_10085511All Organisms → cellular organisms → Bacteria2400Open in IMG/M
3300025935|Ga0207709_10596814All Organisms → cellular organisms → Bacteria874Open in IMG/M
3300025935|Ga0207709_11548558All Organisms → cellular organisms → Bacteria550Open in IMG/M
3300025941|Ga0207711_11034378All Organisms → cellular organisms → Bacteria761Open in IMG/M
3300025942|Ga0207689_11738251All Organisms → cellular organisms → Bacteria516Open in IMG/M
3300025945|Ga0207679_12023219All Organisms → cellular organisms → Bacteria524Open in IMG/M
3300025949|Ga0207667_10693033All Organisms → cellular organisms → Bacteria1021Open in IMG/M
3300026023|Ga0207677_12162848All Organisms → cellular organisms → Bacteria518Open in IMG/M
3300026041|Ga0207639_11130629All Organisms → cellular organisms → Bacteria735Open in IMG/M
3300026095|Ga0207676_10502271All Organisms → cellular organisms → Bacteria1152Open in IMG/M
3300026142|Ga0207698_11831721All Organisms → cellular organisms → Bacteria622Open in IMG/M
3300026142|Ga0207698_12009083All Organisms → cellular organisms → Bacteria592Open in IMG/M
3300027775|Ga0209177_10049019All Organisms → cellular organisms → Bacteria1189Open in IMG/M
3300028380|Ga0268265_10776855All Organisms → cellular organisms → Bacteria932Open in IMG/M
3300031562|Ga0310886_10561127All Organisms → cellular organisms → Bacteria697Open in IMG/M
3300031901|Ga0307406_10993118All Organisms → cellular organisms → Bacteria720Open in IMG/M
3300031908|Ga0310900_11663507All Organisms → cellular organisms → Bacteria541Open in IMG/M
3300032002|Ga0307416_100257683All Organisms → cellular organisms → Bacteria1702Open in IMG/M
3300032005|Ga0307411_11521842All Organisms → cellular organisms → Bacteria615Open in IMG/M
3300032421|Ga0310812_10056001All Organisms → cellular organisms → Bacteria1532Open in IMG/M
3300033412|Ga0310810_11436856All Organisms → cellular organisms → Bacteria521Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere11.76%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere8.40%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere7.56%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere6.72%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere6.72%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere5.88%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere5.04%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil4.20%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil4.20%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil2.52%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil2.52%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere2.52%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere2.52%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere2.52%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere2.52%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil1.68%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil1.68%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.68%
Sugarcane Root And Bulk SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil1.68%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil1.68%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere1.68%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere1.68%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.68%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.68%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere1.68%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere1.68%
Rice Paddy SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil0.84%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.84%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.84%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere0.84%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.84%
Switchgrass RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere0.84%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.84%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2228664021Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300000033Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300000364Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000891Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soilEnvironmentalOpen in IMG/M
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300003267Sugarcane bulk soil Sample L1EnvironmentalOpen in IMG/M
3300003324Sugarcane bulk soil Sample H2EnvironmentalOpen in IMG/M
3300004480Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4EnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005290Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1Host-AssociatedOpen in IMG/M
3300005293Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1Host-AssociatedOpen in IMG/M
3300005331Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaGHost-AssociatedOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005333Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaGHost-AssociatedOpen in IMG/M
3300005334Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2Host-AssociatedOpen in IMG/M
3300005345Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaGEnvironmentalOpen in IMG/M
3300005354Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaGHost-AssociatedOpen in IMG/M
3300005355Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaGHost-AssociatedOpen in IMG/M
3300005364Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaGHost-AssociatedOpen in IMG/M
3300005365Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaGEnvironmentalOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005444Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaGEnvironmentalOpen in IMG/M
3300005459Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2Host-AssociatedOpen in IMG/M
3300005466Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaGEnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005518Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaGEnvironmentalOpen in IMG/M
3300005535Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaGEnvironmentalOpen in IMG/M
3300005539Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2Host-AssociatedOpen in IMG/M
3300005545Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaGEnvironmentalOpen in IMG/M
3300005547Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaGEnvironmentalOpen in IMG/M
3300005563Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2Host-AssociatedOpen in IMG/M
3300005577Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2Host-AssociatedOpen in IMG/M
3300005578Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2Host-AssociatedOpen in IMG/M
3300005615Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaGEnvironmentalOpen in IMG/M
3300005618Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2Host-AssociatedOpen in IMG/M
3300005840Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2Host-AssociatedOpen in IMG/M
3300005841Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2Host-AssociatedOpen in IMG/M
3300005842Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2Host-AssociatedOpen in IMG/M
3300005886Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_205EnvironmentalOpen in IMG/M
3300005937Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1Host-AssociatedOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300006880Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3Host-AssociatedOpen in IMG/M
3300009093Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaGHost-AssociatedOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009174Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaGHost-AssociatedOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300009545Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaGHost-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300010040Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55EnvironmentalOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010166Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27EnvironmentalOpen in IMG/M
3300010375Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaGHost-AssociatedOpen in IMG/M
3300010397Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300013100Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaGHost-AssociatedOpen in IMG/M
3300013296Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaGHost-AssociatedOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300014325Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaGHost-AssociatedOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300025315Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)Host-AssociatedOpen in IMG/M
3300025904Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025911Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025920Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025925Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025935Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025941Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025942Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025945Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025949Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026023Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026041Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026095Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026142Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027775Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)EnvironmentalOpen in IMG/M
3300028380Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300031562Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3EnvironmentalOpen in IMG/M
3300031901Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2Host-AssociatedOpen in IMG/M
3300031908Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1EnvironmentalOpen in IMG/M
3300032002Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3Host-AssociatedOpen in IMG/M
3300032005Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1Host-AssociatedOpen in IMG/M
3300032421Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3EnvironmentalOpen in IMG/M
3300033412Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NCEnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
ICCgaii200_085548812228664021SoilANRIDSLVFRYYDEKVTYSTTVASDGTCDITNVLNAAGNTESEVSPSAAKFIVIAVGVTLPAVGTFGSDGYQPQSQMQLTSDVVLRNS
ICChiseqgaiiDRAFT_089170313300000033SoilDEKVTYETTVVDGVCDITNVRNAAGSTESEVNPGLARFIVIAVGVTLPEVGTFGVAGYQPPSQVQLTSDVVLRNSIVY*
INPhiseqgaiiFebDRAFT_10545712713300000364SoilSDGTCDITDVKDAAGNSKSEVSPAEAKFIVIAVGVTLPAVGTQGQSGYQPASQVQLTSDVVLRNSITX*
JGI10214J12806_1126597023300000891SoilLANRIDSLIFRYYDEKVTYDTTIRTVDGNSICDITNVKNDAGLNKTEVSPGEAKFVVIAVGVTLPAVGTPNTDGYQPPSQVQLTSDVVLRNSIVY*
JGI10216J12902_10241568123300000956SoilYYDEKVTYDTTLVGGVADITNVVNSAGTAEAEVSPSAAKYIVIAVGVVLPAVGTPGSDGYQAPSEVQLTSDITLRNSITY*
soilL1_1004865423300003267Sugarcane Root And Bulk SoilSLIFRYYDEKVTYDTTIRTVDGNPICDITNVKNAAGSDKTEVSPSEAKFIVIAVGVTLPAVGSPNTDGYQPASQVQLTSDVVLRNSVDY*
soilH2_1010965233300003324Sugarcane Root And Bulk SoilSLIFRYYDEKVTYDTTIRTVDGAQICDITNVKNAAGNNKSEVTPGEAKFIVIAVGVTLPAVGSPNTDGYQPPSQVQLTSDIVLRNSIVY*
Ga0062592_10032719923300004480SoilDEKVTYDTTVNDDTGVCDITNVKNAAGETEDEVSPGSAKFVVIAVGVTLPEVGVANSTGYQPKSQVQLTSDVVLRNSIVY*
Ga0062592_10058167023300004480SoilNRIDSLMFRYYDERVTYNTTINDSGNCDIKNVVNSLGNTEDEVSSGSAKFVVIGVCVTLPAVGSPNTDGYQPPTQVQLTSDVVLRNSIVY*
Ga0062594_10265748623300005093SoilDGTCDITNVVNASGTAKTEVSPGSAKYVVIAVGVTLPSVGSVGATGYQPASRVQLTSDVVLRNSIVY*
Ga0065712_1059005613300005290Miscanthus RhizosphereIFRYYDEKVTYDTSYNEDTGVCDITNVTDALGNTKPEVSPDNARFIVIAVGVTLPAVGTPNTDGYQPPSHVQLTSDVVLRNSIVY*
Ga0065715_1016374513300005293Miscanthus RhizosphereVFRYYDEKVTYSTTVDADGTCDITNVVNASGTAKTEVSPGSAKYVVIAVGVTLPSVGSVGATGYQPASRVQLTSDVVLRNSIVY*
Ga0065715_1090733423300005293Miscanthus RhizosphereKKVTYNTTVDATTGVCDITNVKNSLGSSESEVSPAAAKYLVIAVGVTLPAVGKPGSGGYQPPSQMQLTSDVVLRNSINY*
Ga0070670_10004927413300005331Switchgrass RhizosphereVAGNQVCDITNVKNAIGEEESEVSPGAAKFIVIAVGVTLPAVGTINSDGYQPASQVQLTSDVVLRNSIVY*
Ga0070670_10032093123300005331Switchgrass RhizosphereSLIFRYYDEKVTYDTTINDSGQCDITNVVNAAGTAEAEVSPSAAKFIVIAVGVTLPAVGSPKSDGYQPASQVQLTSDVVLRNSIVY*
Ga0066388_10816163823300005332Tropical Forest SoilCDITSVVNASGAAESEVSPSAAKFIVIAVGVSLPEVGRKNTAGYQPASQVQLTSDVVLRNSIVY*
Ga0070677_1068337313300005333Miscanthus RhizosphereGVCDITNVKNASGSTAAEVSPDAAKYIVIAVGVTLPAVGRRNSPGYQPASQVQLTSDVVLRNSIVY*
Ga0068869_10048752213300005334Miscanthus RhizosphereRVDSLIFRYYDEKVTYDTTVTSDGTCDITNVVNASGAAKTEVSPASAKFVVIAVGVSLPSVGALGSTGYQPASQVQLTSDVVLRNSIVY*
Ga0068869_10084330423300005334Miscanthus RhizosphereTVDADGVCDITNVKNAAGDEEKEVSPGSAKFIVIAVGVTLPSVGTQGAEGYQPPSQIQLTSDVVMRNSIVY*
Ga0070692_1005020113300005345Corn, Switchgrass And Miscanthus RhizosphereFRYYDEKVTYDTTIDGSGNCDITNVKNAAGDDESEVSPGEAKFIVIAVAVTLPAVGKQGVEGYQPASQVQLTSDVVLRNSIVY*
Ga0070675_10175612723300005354Miscanthus RhizosphereNTTVDATTGVCDITNVKNSLGSSESEVSPAAAKYLVIAVGVTLPAVGKPGSGGYQPPSQMQLTSDVVLRNSINY*
Ga0070671_10075053223300005355Switchgrass RhizosphereIDSLIFRYYDEKVTYDTTIRTVSGNQICDITNVKNAAGDAKSEVSPGEAKFVVIAVGVTLPAVGTPNSDGYQPASQVQLTSDVVLRNSIVY*
Ga0070673_10022575813300005364Switchgrass RhizosphereFRYYDKKVTYDTTVNSDGVCDITNVLNPSGTAESEVSPGKAKFVVIAVGVTLPAVGAPNTSGYQPPAEVQLTSDVVLRNSIDY*
Ga0070673_10032130823300005364Switchgrass RhizosphereITNVTNAAGTTETEVSPSAAKFIVIAVGVTLPAVGKSGSNGYQPPSQVQLTSDVVLRNSIVY*
Ga0070673_10104530113300005364Switchgrass RhizosphereIDSLIFRYYDEKVTYDTTIRTVDGSPICDITNVKNAAGSDKTEVSPSEAKFIVIAVGVTLPAVGSPNTDGYQPASQVQLTSDVVLRNSTDY*
Ga0070688_10118837923300005365Switchgrass RhizosphereVVDGVCDVTNVKNAAGDDEDEVSPGSAKFIVIAVGVTLPEIGAKGAEGYQPPSQVQLTSDIVLRNSIVY*
Ga0070705_10116985523300005440Corn, Switchgrass And Miscanthus RhizosphereYSTTVVNGVCDITNVKNASGSTAAEVSPDTAKYIVIAVGVTLPAVGRRNSPGYQPASQVQLTSDVVLRNSIVY*
Ga0070705_10175284223300005440Corn, Switchgrass And Miscanthus RhizosphereIFRYYDEKVTYDTTVDATTNVCDITNVKNAAGETENEVSPGAAKFVVIVVGVTLPEVGKAGDPGYQAKSQVQLTSNVVLRNSIIY*
Ga0070694_10002095213300005444Corn, Switchgrass And Miscanthus RhizosphereVDSDGNCDITNVVNAAGVAKSEVSPGSAKFVVIAVGVSLPAVGTVDSSGYQPPTQVHLTSDIVLRNSIVY*
Ga0070694_10028824613300005444Corn, Switchgrass And Miscanthus RhizosphereDSLVFRYYDEKVTYDTTVDATTNVCDITNVKNAAGDTENEVSPGAAKFVVIVVGVTLPEVGKAGDPGYQAKSQVQLTSNVVLRNSIIY*
Ga0070694_10056467713300005444Corn, Switchgrass And Miscanthus RhizosphereIDSLIFRYYDEKVSYDTTINAAGACDITNVKNAAGNNEAEVSPGAAKFIVIAVGVSLPAVGTPNATGYQPAAQVQLASDVVLRNSIVY*
Ga0068867_10215888713300005459Miscanthus RhizosphereYDTTVDADGTCNITNVRNAAGNTENDVSPSAAKFIVIAVGVTLPAVGTRGSDGYQPSSRVQLTSDVVLRNSIVY*
Ga0070685_1075392813300005466Switchgrass RhizosphereYDEKVTYDTTIRTVSGNQICDITNVKNAAGDAKSEVSPGEAKFVVIAVGVTLPAVGTPNTTGYQPASQVQLTSDVVLRNSIVY*
Ga0070707_10180285123300005468Corn, Switchgrass And Miscanthus RhizosphereDITNVKNAAGNDEAEVSPGAAKFIVIAVGVSLPAVGTPNATGYQPAAQVQLASDVVLRNSIVY*
Ga0070699_10047366823300005518Corn, Switchgrass And Miscanthus RhizosphereDTTVDGSGNVDITNVKNAAGDNETEVSPGNAKFVVIAVGVTLPAIGTQGNEGYQPPSQVQLTSDVTLRNSIVY*
Ga0070699_10208944313300005518Corn, Switchgrass And Miscanthus RhizosphereEKVTYDTTLTAGVADITNVRNAAGNTEAEVSPGAAKYIVIAVGVTLPAVGTPGSDGYQPASEVQLTSDVTLRNSINY*
Ga0070684_10176514713300005535Corn RhizosphereDTTIRTVSGAQICDITNVKNAAGDAKSEVSPGAAKFVVIAVGVTLPAVGTPKSNGYQPASQVQLTSDVVLRNSIVY*
Ga0068853_10198988823300005539Corn RhizosphereTYDTTITSGVADITNVRNSAGNVEAEVSPGAARYVVMAVGVVLPAVGTPGADGYQPASEVELTSDITLRNSITY*
Ga0070695_10020928713300005545Corn, Switchgrass And Miscanthus RhizosphereTINAQGACDITNVKNAAGDDENEVLPANAKFIVIAVGVSLPAVGTPNSPGYQRATQVQLTSDVVLRNSIIY*
Ga0070693_10025775423300005547Corn, Switchgrass And Miscanthus RhizosphereLVFRYYDEKVTYDTTVDSDGNCDITNVVNAAGVAKSEVSPGSAKFVVIAVGVSLPAVGTVDSSGYQPPTQVHLTSDIVLRNSIVY*
Ga0070693_10164828313300005547Corn, Switchgrass And Miscanthus RhizosphereTCDITDVKDAAGNSKSEVSPAEAKFIVIAVGVTLPAVGTRGQSGYQPASQVQLTSDVVLRNSITY*
Ga0068855_10046543713300005563Corn RhizosphereIDASGNCDITNVKNAAGAAESEVSPGEAKFIVVAVAVTLPAVGTQGIEGYQPPSQVQLTSDVVLRNSIVY*
Ga0068857_10121423113300005577Corn RhizosphereTVLANRIDSLIFRYYDEKVTYDTTVDETTGTCDITNVKDALGNDKTEVSPANAKFIVIAVGVTLPAVGIPNTDGYQPPSRVQLTSNVVLRNSIIY*
Ga0068854_10120654023300005578Corn RhizosphereFRYYDEKVTYDTTVLSDGTCDITNVTNAAGTTETEVSPSAAKFIVIAVGVTLPAVGTAGADGYQPASQVQLTSDVVLRNTIVY*
Ga0070702_10002679833300005615Corn, Switchgrass And Miscanthus RhizosphereNRIDSLIFRYYDEKVTYETSYNENTGVCDITNVKDASGNSKSEVSPDNAKFIVIAVGVTLPAVGSPKTDGYQPASHVQLTSDVVLRNSIVY*
Ga0068864_10030593323300005618Switchgrass RhizosphereVLANRVDSLIFRYYDEKVTYDTTIRTVDGTQICDITNVKNAAGSDKSEVSPGAAKFVVIAVGVTLPAVGTPNTDGYQPPSQVQLTSDVVLRNVIDY*
Ga0068864_10035695123300005618Switchgrass RhizosphereDTTIRTVDGNEICDITNVKNAAGLNKTEVSPGDAKFVVIAVGVTLPAVGTPNTDGYQPPSQVQLTSDVVLRNSIVY*
Ga0068864_10201313213300005618Switchgrass RhizosphereNRIDSLIFRYYDEKVTYETSYNENTGVCDITNVKDASGNSKSEVSPDNAKFIVISVGVTLPAVGSPKTDGYQPASHVQLTSDVVLRNSIVY*
Ga0068864_10247844123300005618Switchgrass RhizosphereTYDTTIRTVSGNQICDITNVKNAAGDAKSEVSPGEAKFVVIAVGVTLPAVGTPNTTGYQPASQVQLTSDVVLRNSIVY*
Ga0068870_1005239723300005840Miscanthus RhizosphereFRYYDEKVTYSTTVNSDGVCDITDVVNASGAAKSEVSPAAAKFVVIAVGVTLPEVGTRGQSGYQPASQVQLTSDVVLRNSIDY*
Ga0068863_10043589213300005841Switchgrass RhizosphereYYDEKVTYETSYNENTGVCDITNVKDASGNSKSEVSPDNAKFIVIAVGVTLPAVGSPKTDGYQPASHVQLTSDVVLRNSIVY*
Ga0068863_10213686723300005841Switchgrass RhizosphereDERVTYDTTINAAGACDITNDKNAAGNNEAEVSPGAAKFIVIAVGVSLPAVGTPNATGYQPAAQVQLASDVVLRNSIVY*
Ga0068858_10049578513300005842Switchgrass RhizosphereVLANRIDSLIFRYYDEKVTYDTTIRTVSGNQICDITNVKNAAGDAKSEVSPGEAKFVVIAVGVTLPAVGTPNTTGYQPASQVQLTSDVVLRNSIVY*
Ga0068858_10179115213300005842Switchgrass RhizosphereDSLIFRYYDEKVTYETSYNENTGVCDITNVKDASGNTKSEVSPDNAKFIVIAVGVTLPAVGSPKTDGYQPASHVQLTSDVVLRNSIVY*
Ga0075286_100842723300005886Rice Paddy SoilSLIFRYYDEKVTYNTTIRTVDGNSICDITNVKNASGVDKSEVSPGEAKFVVIAVGVTLPAVGSPNTDGYQPASQVQLTSDVVLRNSIVY*
Ga0081455_1097389023300005937Tabebuia Heterophylla RhizosphereVLANRIDSLVFRYYDKKVTYETTVNSDGGCDITNVVNASGNRESEVSPGAAKFVVIAVGVTLPAVGTPGTAGYQPPSRVQLTSDVVLRNSIDY*
Ga0079222_1194694723300006755Agricultural SoilYSTTVDSSGVCDITDVKDAAGNLKSEVSPALAKFVVIAVGVTLPEVGTRGQSGYQPASQVQLTSDVVLRNSIVY*
Ga0075428_10054468523300006844Populus RhizosphereDASGNCDITNVKNAAGDDESEVSPGEAKFIVIAVAVTLPAVGTQGIEGYQPPSQVQLTSDVVLRNSIVY*
Ga0075421_10031847723300006845Populus RhizosphereSLIFRYYDKKVTYDTTVDADGVCDITNVKNAADTTETEVPPGSAKFVVIAVGVTLPAVGTKGVEGYQPPYQVQLTSDVTLRNAIVY*
Ga0075425_10057353113300006854Populus RhizosphereRIDSLVIRYYDEKVTYDTTVTSGVADITNVRNSGGNIETEVSPGAAKYIVIAVGVVLPAVGTPGSDGYQPPSEVQLTSDITMRNAITY*
Ga0075434_10082902723300006871Populus RhizosphereYYDEKVTYNTTLLTGVGGQTVADLTNVRNSAGNLKSEVSPADAKYVVIAVGVVLPTIGTPGSPGYQAQSEVELTSDVTLRNSITY*
Ga0075429_10129662523300006880Populus RhizosphereYDEKVTYDTTIDASGNCDITNVKNAAGANESEVSPGEAKFIVVAVAVTLPAVGTQGIEGYQPPSQVQLTSDVVLRNSIVY*
Ga0105240_1154263423300009093Corn RhizosphereYDTTIRTVSGNQICDITNVKNAAGDAKSEVSPGEAKFVVIAVGVTLPAVGTPNTTGYQPASQVQLTSDVVLRNSIVY*
Ga0111539_1301516523300009094Populus RhizosphereRIDSLIFRYYDEKVTYDTTVDATTNVCDITNVKNAAGQTENEVSPGAAKFVVIVVGVTLPEVGKAGDPGYQAKSQVQLTSNVVLRNSIIY*
Ga0114129_1084339823300009147Populus RhizosphereYDTTVDADGVCDITNVKNASDTTESEVPPGSAKFVVIAVGVTLPAVGTKGVEGYQPPYQVQLTSDVTLRNAIVY*
Ga0114129_1208822823300009147Populus RhizosphereVFRYYDEKVTYDTTVTGSGACDITNVKNAAGLTKNPVSPGVAKFIVIAVGVTLPAVGTPATDGYQPPTQVQLTSDVVLRNSIDY*
Ga0105241_1045166323300009174Corn RhizosphereVIRYYDKKVTYNTTVDATTGVCDITNVKNSLGSSESEVSPAAAKYLVIAVGVTLPAVGKPGSGGYQPPSQMQLTSDVVLRNSINY*
Ga0105241_1108850923300009174Corn RhizosphereLANRIDSLIFRYYDEKVIYDTTVRTVDGAQICDITNVKNAAGNDKTEVSPGEAKYVVIAVGVTLPAVGSPNTDGYQPASQVQLTSDIVLRNSIDY*
Ga0105241_1194093213300009174Corn RhizosphereAGVADITNVRNAAGNIEAEVSPGNAKYIVVAVGVTLPAVGTAGSDGYQPASEVQLTSDITLRNSINN*
Ga0105241_1232119423300009174Corn RhizosphereTTVNSDGVCDITDVVNASGAAKSEVSPAAAKFVVIAVGVTLPEVGTRGQSGYQPASQVQLTSDVVLRNSVDY*
Ga0105248_1279295923300009177Switchgrass RhizosphereTFRYYDEKVTYDTTVNADGTCDITNVLNAAGTAEAEVSPSAAKFIVIAVGVTLPSVGTPGADGYQPASQVQLTSDVVLRNTLIY*
Ga0105237_1244003813300009545Corn RhizosphereANRIDSLIFRYYDEKVTYDTTVRTVAGAQICDITNVKNAAGNDKSEVSPGEAKYIVIAVGVTLPAVGSPNTDGYQPASQVQLTSDIVLRNSIEY*
Ga0105249_1062418323300009553Switchgrass RhizosphereTITSDGTCDITDVKDAAGNSKSEVSPAEAKFIVIAVGVTLPAVGTRGQSGYQPASQVQLTSDVVLRNSITY*
Ga0126308_1007207323300010040Serpentine SoilTYDTTVVDGVCDITNVKNAAGETEDEVSPGAGRFVVIAVGVTLPEVGTAGSEGYQPASQVQLTSDVVLRNSIVY*
Ga0126382_1190608513300010047Tropical Forest SoilDSLILRYYDEKVTYSTTVDSDGNCDITNVVNASGAAKSEVSPGSAKFVVIAVGVSLPAVGTVNSAGYQPPSQVQLTSDVVLRNSIVY*
Ga0126382_1225844313300010047Tropical Forest SoilTQICDITNVKNAAGNSKSEVSPGAARFIVIAVGVTLPSVGSPNTDGYQPSSQVQLTSDVVLRNSITY*
Ga0126306_1182488613300010166Serpentine SoilVTYDTTITTVDGSPICDITNVKDAAGNAKSEVSPGAAKFVVIAVGVTLPAVGKLESPGYQPPSQVQLTSDVVLRNSIVY*
Ga0105239_1143784113300010375Corn RhizosphereTINGNVVCDITNVKDALGNTKTEVSPANAKFIVIAVGVTLPALGTQGAEGYQPPSQVQLTSDVVLRNSIVY*
Ga0134124_1031376813300010397Terrestrial SoilYDTTVDATTNVCDITNVKNAAGETENEVSPGAAKFVVIVVGVTLPEVGKAGDPGYQAKSQVQLTSNVVLRNSIIY*
Ga0134124_1201123423300010397Terrestrial SoilGACDITNVKNASGATETEVSPAAAKFIVIAVGVTLPAVGAPNTAGFQPASQVQLTSDVVLRNSIAY*
Ga0134127_1067440913300010399Terrestrial SoilTVRTVDGAQICDITNVKNAAGDNKSEVSPGEAKYIVIAVGVTLPAVGSPNTDGYQPASQVQLTSDVVLRNSIDY*
Ga0134122_1234906613300010400Terrestrial SoilDKKVTYDTTVNSDGVCDITNVLNSSGTAESEVSPGKAKFVVIAVGVTLPAVGAPNTSGYQPPAQVQLTSDVVLRNSIDY*
Ga0134122_1257233023300010400Terrestrial SoilGLANRVDSLVFRYYDEKVTYDTTVDEKTGVCDITNVKNAAGEDEKEVKPGSARFIVIAVGVTLPSLGTKGAEGYQPPSQVQLTSDVVLRNSIVY*
Ga0164303_1031651323300012957SoilGVADITNVRNAAGNTEAEVSPGNAKYIVIAVGVTLPAVGTPRSDGYQAASEVQLTSDITLRNSINY*
Ga0157373_1082459413300013100Corn RhizosphereKVTYDTTVVDGVCDITNVKNAAGDSEDEVSPGSAKFVVIAVGVTLPEIGAKGAEGYQPPSQVQLTSDIVLRNSIVY*
Ga0157374_1223370223300013296Miscanthus RhizosphereVLANRVDSLVFRYYDEKVTYDTTVLSDGTCDITNVTNAAGTTETEVSPSAAKFIVIAVGVTLPAVGESGSNGYQPPSQVQLTSDVVLRNSIVY*
Ga0157378_1322300713300013297Miscanthus RhizosphereNRIDSLIFRYYDKKVTYDTTVNSNGICDITNVVNSSGTAEKEVSPGAAKFVVIAVGVTLPAVGSPNTTGYQPPSQVQLTSDVVLRNSIDY*
Ga0163162_1027086813300013306Switchgrass RhizosphereKVTYDTTIRTVSGNQICDITNVKNAAGDAKSEVSPGEAKFVVIAVGVTLPAVGTPNTTGYQPASQVQLTSDVVLRNSIVY*
Ga0163162_1333304513300013306Switchgrass RhizosphereYDTTIDGSGNCDITNVKNAAGDDESEVSPGEAKFIVIAVAVTLPAVGKQGVEGYQPASQVQLTSDVVLRNSIVY*
Ga0157375_1243142623300013308Miscanthus RhizosphereCDITNVKNAAGDEEKEVSPGSAKFIVIAVGVTLPSVGTQGAEGYQPPSQIQLTSDVVMRNSIVY*
Ga0163163_1108208223300014325Switchgrass RhizosphereYDEKVTYDTTIRTVDGNEICDITNVKNAAGLNKTEVSPGDAKFVVIAVGVTLPAVGTPNTDGYQPPSQVQLTSDVVLRNSIVY*
Ga0132258_1238279013300015371Arabidopsis RhizosphereSLVFRYYDEKVTYDTTVDATTNVCDITNVKNAAGDTENEVSPGAAKFVVIVVGVTLPEVGKAGDPGYQAKSQVQLTSNVVLRNSIIY*
Ga0132258_1346372323300015371Arabidopsis RhizosphereIDSLVIRYYDEKVTYSTTVVNGVCDITDVKNAAGSTEAEVSPSAAKYIVIAVGVTLPAVGTPKTAGYQPASQVQLTSDVVLRNSIAY*
Ga0207697_1028125313300025315Corn, Switchgrass And Miscanthus RhizosphereIDSLIFRYYDEKVTYDTTVRTVAGAQICDITNVKNAAGNDKSEVTPGEAKYIVIAVGVTLPAVGSPNTDGYQPASQVQLTSDIVLRNSIDY
Ga0207647_1051955213300025904Corn RhizosphereFRYYDEKVTYDTSYNENTGVCDITNVTDALGNSKSEVSPDNAKFIVIAVGVTLLAVGTPNTDGYQPPSHVQLTSDVVLRNSIVY
Ga0207654_1032849213300025911Corn RhizosphereITNVKNAAGNDKSEVSPGEAKYVVIAVGVTLPAVGSPNTDGYQPASQVQLTSDVVLRNSIEY
Ga0207649_1021094223300025920Corn RhizosphereRIDSMVIRYYDKKVTYNTTVDATTGVCDITNVKNSLGSSESEVSPAAAKYLVIAVGVTLPAVGKPGSGGYQPPSQMQLTSDVVLRNSINY
Ga0207646_1052057513300025922Corn, Switchgrass And Miscanthus RhizosphereNRIDSLVIRYYDEKVTYNTTLTAGVADITNVRNAAGNTEAEVSPGAAKYIVIAVGVTLPAVGTPGSDGYQPASEVQLTSDVTLRNSINY
Ga0207650_1008551113300025925Switchgrass RhizosphereTVAGNQVCDITNVKNAIGEEESEVSPGAAKFIVIAVGVTLPAVGTINSDGYQPASQVQLTSDVVLRNSIVY
Ga0207709_1059681413300025935Miscanthus RhizosphereANRIDSLVIRYYDEKVTYDTTLVAGVADITNVRNAAGNTEAEVSPGNAKYIVIAVGVTLPAVGTPRSDGYQPASEVQLTSDITLRNSINY
Ga0207709_1154855813300025935Miscanthus RhizosphereLVFRYYDEKVTYDTTVNASGNCDITNVKNAAGNAETEVTPGNAKFVVIAVGVTLPAIGTQGNEGYQPPSQVQLTSDVVLRNSIVY
Ga0207711_1103437813300025941Switchgrass RhizosphereTTVTTVDGSQICDITNVKNAAGEAKSDVSPGDAKFVVIAVGVTLPAVGTPNTDGYQPASQVQLTSDVVLRNSIVY
Ga0207689_1173825123300025942Miscanthus RhizosphereDITNVKNAAGSNEAEVSPALARYLVIAVGVTLPAVGTRGTDGYQPASQLQLTSDVVLRNSITY
Ga0207679_1202321923300025945Corn RhizosphereYDTTVNADGTCDITNVLNAAGTAEAEVSPSAAKFIVIAVGVTLPSVGTPGADGYQPASQVQLTSDVVLRNTLVY
Ga0207667_1069303323300025949Corn RhizosphereVFRYYDEKVTYDTTVDAGGNCDITNVKNAAGAAETEVTPGAAKFIVIAVGVTLPAIGTQGNEGYQPPSQVQLTSDVVLRNSIVY
Ga0207677_1216284823300026023Miscanthus RhizosphereYNTTVDATTGVCDITNVKNSLGSSESEVSPAAAKYLVIAVGVTLPAVGKPGSGGYQPPSQMQLTSDVVLRNSINY
Ga0207639_1113062923300026041Corn RhizosphereVIYDTTITTVDGNQICDITNVKNAAGDNKSEVAPGEAKFVVIAVGVTLPAVGTPNTDGYQPPSQVQLTSDVVLRNSIDY
Ga0207676_1050227123300026095Switchgrass RhizosphereTYNTTVDSDGNCDITNVVNASGAAKSEVSPGSAKFVVIAVGVTLPAVGTVDSTGYQPPAQVQLTSDVVLRNSIVY
Ga0207698_1183172123300026142Corn RhizosphereTVLANRIDSLIFRYYDEKVTDDTSYNENTGVCDITNVTDASGNSKSEVSPDNARFIVIAVGVTLPAVGTPNTDGYQPPSHVQLTSDVVLRNSIVY
Ga0207698_1200908323300026142Corn RhizosphereVLANRIDSLVFRYFDEKVTYDTTVDGSGNVDITNVKNAAGDDETEVSPGNAKFVVIAVGVTLPAIGTQGNEGYQPPSQVQLTSDVTLRNSIVY
Ga0209177_1004901923300027775Agricultural SoilEKVTYDTTIRTVSGTQICDITNVKNAAGSSKSEVSPGAAKFVVIAVGVTLPAVGTPSEEGYQPASQVQLTSDVVLRNSIVY
Ga0268265_1077685523300028380Switchgrass RhizosphereTTNVCDITNVKNAAGDAENEVSPGAAKFVVIAVGVTLPEVGKAGDPGYQAKSQVQLTSNVVLRNSIVY
Ga0310886_1056112723300031562SoilIRTVDGSQICDITNVKNASGLDKTEVSPAEAKFVVIAVGVTLPAVGAPNTDGYQPPSQVQLTSDVVLRNSIVY
Ga0307406_1099311813300031901RhizosphereTKNSDGEADITTVVNASGLTETEVSPGSAKFIVIAVGVTLPAVGVSGANGYQPETQITLTSDVVLRNSIVY
Ga0310900_1166350713300031908SoilEKVTYDTTVRTVDGAEICDITNVKNAAGVDKSEVSPGEAKYVVIAVGVTLPAVGSPNTDGYQPASQVQLTSDVVLRNSIVY
Ga0307416_10025768313300032002RhizosphereFRYYDEKVTYTTTKNSDGEADITTVVNASGLTETEVSPGSAKFIVIAVGVTLPAVGVSGANGYQPETQITLTSDVVLRNSIVY
Ga0307411_1152184223300032005RhizosphereRYYDEKVTYDTTVVDGVCDITNVKNAIGDDEDEVSPGSARFVVIAVGVTLPAIGVQGADGYQPPSQVQLTSDIVLRNSIVY
Ga0310812_1005600113300032421SoilIDSLVFRYYDEKVTYDTTVDADGTCDITNVVNASGTAKTEVSPAAAKYVVIAVGVTLPSVGSVGATGYQPASRVQLTSDVVLRNSIVY
Ga0310810_1143685613300033412SoilDSLVIRYYDKKVTYDTTVTDGVADITNVLNAAGSSQTEVTPGAAKYIVIAVGVTLPAVGTPGSDGYQPPSEVQLTSDITLRNAITY

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.