Metagenome / Metatranscriptome Family F074637

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F074637
Family Type	Metagenome / Metatranscriptome
Number of Sequences	119
Average Sequence Length	95 residues
Representative Sequence	MHRNPVLDLPLTAVMRSEIALTLQHVLQIYTVGNFLKAWRNPKNHKSIEQVFDNPQQARHAAATCAHWLGIKTLASPGSVAGWWRADEYPALSA
Number of Associated Samples	98
Number of Associated Scaffolds	119

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	68.91 %
% of genes near scaffold ends (potentially truncated)	27.73 %
% of genes from short scaffolds (< 2000 bps)	83.19 %
Associated GOLD sequencing projects	91
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.67

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (98.319 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil (12.605 % of family members)
Environment Ontology (ENVO)	Unclassified (29.412 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (38.655 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 45.08% β-sheet: 3.28% Coil/Unstructured: 51.64%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.67
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.67
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 119 Family Scaffolds
PF00709	Adenylsucc_synt	13.45
PF01128	IspD	10.92
PF06877	RraB	3.36
PF04342	DMT_6	1.68
PF00550	PP-binding	0.84
PF04256	DUF434	0.84
PF00177	Ribosomal_S7	0.84
PF08281	Sigma70_r4_2	0.84
PF00174	Oxidored_molyb	0.84
PF14355	Abi_C	0.84
PF05738	Cna_B	0.84
PF05697	Trigger_N	0.84
PF13090	PP_kinase_C	0.84
PF01842	ACT	0.84
PF08327	AHSA1	0.84
PF07584	BatA	0.84
PF03471	CorC_HlyC	0.84
PF00722	Glyco_hydro_16	0.84
PF07592	DDE_Tnp_ISAZ013	0.84
PF02405	MlaE	0.84
PF13384	HTH_23	0.84
PF01261	AP_endonuc_2	0.84
PF07589	PEP-CTERM	0.84
PF13709	DUF4159	0.84
PF00006	ATP-synt_ab	0.84
PF02773	S-AdoMet_synt_C	0.84
PF00085	Thioredoxin	0.84
PF02670	DXP_reductoisom	0.84

COG ID	Name	Functional Category	% Frequency in 119 Family Scaffolds
COG0104	Adenylosuccinate synthase	Nucleotide transport and metabolism [F]	13.45
COG0746	Molybdopterin-guanine dinucleotide biosynthesis protein A	Coenzyme transport and metabolism [H]	10.92
COG1207	Bifunctional protein GlmU, N-acetylglucosamine-1-phosphate-uridyltransferase/glucosamine-1-phosphate-acetyltransferase	Cell wall/membrane/envelope biogenesis [M]	10.92
COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	Lipid transport and metabolism [I]	10.92
COG2068	CTP:molybdopterin cytidylyltransferase MocA	Coenzyme transport and metabolism [H]	10.92
COG3076	Regulator of RNase E activity RraB	Translation, ribosomal structure and biogenesis [J]	3.36
COG3169	Uncharacterized membrane protein, DMT/DUF486 family	Function unknown [S]	1.68
COG0049	Ribosomal protein S7	Translation, ribosomal structure and biogenesis [J]	0.84
COG0192	S-adenosylmethionine synthetase	Coenzyme transport and metabolism [H]	0.84
COG0544	FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)	Posttranslational modification, protein turnover, chaperones [O]	0.84
COG0743	1-deoxy-D-xylulose 5-phosphate reductoisomerase	Lipid transport and metabolism [I]	0.84
COG0767	Permease subunit MlaE of the ABC-type intermembrane phospholipid transporter Mla	Cell wall/membrane/envelope biogenesis [M]	0.84
COG2041	Molybdopterin-dependent catalytic subunit of periplasmic DMSO/TMAO and protein-methionine-sulfoxide reductases	Energy production and conversion [C]	0.84
COG2273	Beta-glucanase, GH16 family	Carbohydrate transport and metabolism [G]	0.84
COG2454	Predicted nuclease, contains PIN domain	General function prediction only [R]	0.84
COG3915	Uncharacterized conserved protein	Function unknown [S]	0.84

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.32 %
Unclassified	root	N/A	1.68 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.32 %
Unclassified	root	N/A	1.68 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.32 %
Unclassified	root	N/A	1.68 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	86.55 %
Unclassified	root	N/A	1.68 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.84 %

Name	Rank	Taxonomy	Distribution
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	86.55 %
Unclassified	root	N/A	1.68 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.84 %

Name	Rank	Taxonomy	Distribution
Phycisphaerae	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae	85.71 %
Unclassified	root	N/A	1.68 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.84 %

Name	Rank	Taxonomy	Distribution
unclassified Phycisphaerae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae	82.35 %
Unclassified	root	N/A	1.68 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.84 %

Name	Rank	Taxonomy	Distribution
Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	82.35 %
Unclassified	root	N/A	1.68 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.84 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2119805009\|FNTS007_GKN1E7E01DKX6L	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	507	Open in IMG/M
2170459016\|G1P06HT02IYZ1A	Not Available	595	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101734832	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	2483	Open in IMG/M
3300000956\|JGI10216J12902_105718677	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae	1220	Open in IMG/M
3300003910\|JGI26437J51864_10001061	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	6476	Open in IMG/M
3300004114\|Ga0062593_102677254	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	567	Open in IMG/M
3300004156\|Ga0062589_102068576	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	579	Open in IMG/M
3300004463\|Ga0063356_102742801	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	758	Open in IMG/M
3300004463\|Ga0063356_105576440	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	540	Open in IMG/M
3300005331\|Ga0070670_100232094	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	1606	Open in IMG/M
3300005332\|Ga0066388_102220477	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	991	Open in IMG/M
3300005340\|Ga0070689_101932912	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	539	Open in IMG/M
3300005364\|Ga0070673_101764182	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	586	Open in IMG/M
3300005367\|Ga0070667_101770841	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	581	Open in IMG/M
3300005529\|Ga0070741_10215259	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	1858	Open in IMG/M
3300005840\|Ga0068870_10569116	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	765	Open in IMG/M
3300005841\|Ga0068863_102225886	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	558	Open in IMG/M
3300005844\|Ga0068862_102390590	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	540	Open in IMG/M
3300006028\|Ga0070717_10024716	All Organisms → cellular organisms → Bacteria	4773	Open in IMG/M
3300006796\|Ga0066665_10516267	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	977	Open in IMG/M
3300006844\|Ga0075428_101379216	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	740	Open in IMG/M
3300006847\|Ga0075431_101583300	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	613	Open in IMG/M
3300006853\|Ga0075420_100062766	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae	3294	Open in IMG/M
3300006876\|Ga0079217_10179488	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	1059	Open in IMG/M
3300006876\|Ga0079217_10229993	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	972	Open in IMG/M
3300006876\|Ga0079217_11325118	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	557	Open in IMG/M
3300006893\|Ga0073928_10026637	All Organisms → cellular organisms → Bacteria	5693	Open in IMG/M
3300006894\|Ga0079215_10308488	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	879	Open in IMG/M
3300006894\|Ga0079215_10945104	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	625	Open in IMG/M
3300006918\|Ga0079216_10056963	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	1720	Open in IMG/M
3300006918\|Ga0079216_10250034	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	1012	Open in IMG/M
3300006918\|Ga0079216_11177037	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	613	Open in IMG/M
3300007004\|Ga0079218_10568826	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	1025	Open in IMG/M
3300007004\|Ga0079218_11757521	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	691	Open in IMG/M
3300007004\|Ga0079218_13131059	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	558	Open in IMG/M
3300007004\|Ga0079218_13344911	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	543	Open in IMG/M
3300009012\|Ga0066710_100239302	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae	2617	Open in IMG/M
3300009100\|Ga0075418_10910982	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	950	Open in IMG/M
3300009137\|Ga0066709_100690449	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	1466	Open in IMG/M
3300009156\|Ga0111538_11291153	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	922	Open in IMG/M
3300009156\|Ga0111538_13240724	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	567	Open in IMG/M
3300009789\|Ga0126307_10763827	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	780	Open in IMG/M
3300009840\|Ga0126313_11051938	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	668	Open in IMG/M
3300010037\|Ga0126304_10274787	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	1112	Open in IMG/M
3300010375\|Ga0105239_12613410	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	589	Open in IMG/M
3300010396\|Ga0134126_10053771	All Organisms → cellular organisms → Bacteria	5036	Open in IMG/M
3300010396\|Ga0134126_10137505	Not Available	2972	Open in IMG/M
3300010399\|Ga0134127_11949778	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	665	Open in IMG/M
3300011333\|Ga0127502_11229026	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	660	Open in IMG/M
3300012045\|Ga0136623_10356636	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	619	Open in IMG/M
3300012212\|Ga0150985_108596626	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	511	Open in IMG/M
3300012212\|Ga0150985_119952634	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	1250	Open in IMG/M
3300012356\|Ga0137371_10383830	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	1090	Open in IMG/M
3300012469\|Ga0150984_115161860	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	716	Open in IMG/M
3300012469\|Ga0150984_117500750	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	1373	Open in IMG/M
3300012684\|Ga0136614_10466332	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	915	Open in IMG/M
3300013297\|Ga0157378_11510788	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	716	Open in IMG/M
3300013297\|Ga0157378_11799266	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	661	Open in IMG/M
3300013306\|Ga0163162_10241085	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	1939	Open in IMG/M
3300013308\|Ga0157375_13343969	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	534	Open in IMG/M
3300014325\|Ga0163163_13262930	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	506	Open in IMG/M
3300014495\|Ga0182015_10679530	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	650	Open in IMG/M
3300014501\|Ga0182024_10009318	All Organisms → cellular organisms → Bacteria	20341	Open in IMG/M
3300014501\|Ga0182024_10182906	All Organisms → cellular organisms → Bacteria	2892	Open in IMG/M
3300014838\|Ga0182030_10748900	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	905	Open in IMG/M
3300015077\|Ga0173483_10556226	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	623	Open in IMG/M
3300015360\|Ga0163144_10003344	All Organisms → cellular organisms → Bacteria	36546	Open in IMG/M
3300015372\|Ga0132256_102491140	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	619	Open in IMG/M
3300015373\|Ga0132257_102515200	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	669	Open in IMG/M
3300015374\|Ga0132255_102527981	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	784	Open in IMG/M
3300017787\|Ga0183260_10969383	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	524	Open in IMG/M
3300018465\|Ga0190269_11472347	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	558	Open in IMG/M
3300018466\|Ga0190268_11603626	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	573	Open in IMG/M
3300018476\|Ga0190274_10199677	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	1757	Open in IMG/M
3300018481\|Ga0190271_12854200	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	580	Open in IMG/M
3300018890\|Ga0193595_1004380	All Organisms → cellular organisms → Bacteria → Proteobacteria	5368	Open in IMG/M
3300019767\|Ga0190267_11066712	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	576	Open in IMG/M
3300021180\|Ga0210396_10001156	All Organisms → cellular organisms → Bacteria	29644	Open in IMG/M
3300021559\|Ga0210409_11000598	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	710	Open in IMG/M
3300022557\|Ga0212123_10013270	All Organisms → cellular organisms → Bacteria	10802	Open in IMG/M
3300022756\|Ga0222622_10178518	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	1393	Open in IMG/M
3300022756\|Ga0222622_10287025	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	1128	Open in IMG/M
3300022756\|Ga0222622_10311833	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	1086	Open in IMG/M
3300025925\|Ga0207650_10139239	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	1906	Open in IMG/M
3300025925\|Ga0207650_10520304	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	995	Open in IMG/M
3300025926\|Ga0207659_10188139	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	1641	Open in IMG/M
3300025931\|Ga0207644_11725121	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	524	Open in IMG/M
3300025960\|Ga0207651_11548620	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	597	Open in IMG/M
3300025986\|Ga0207658_11804417	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	558	Open in IMG/M
3300026088\|Ga0207641_12347304	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	533	Open in IMG/M
3300027639\|Ga0209387_1199768	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	549	Open in IMG/M
3300027863\|Ga0207433_10079215	All Organisms → cellular organisms → Bacteria	3203	Open in IMG/M
3300027885\|Ga0209450_10000003	All Organisms → cellular organisms → Bacteria	286269	Open in IMG/M
3300027886\|Ga0209486_10123026	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	1402	Open in IMG/M
3300027886\|Ga0209486_10142046	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	1315	Open in IMG/M
3300027909\|Ga0209382_10333823	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	1702	Open in IMG/M
3300028889\|Ga0247827_11242922	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	518	Open in IMG/M
3300029943\|Ga0311340_10425313	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	1212	Open in IMG/M
3300030618\|Ga0311354_11370771	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	631	Open in IMG/M
3300031234\|Ga0302325_13297298	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	512	Open in IMG/M
3300031715\|Ga0307476_10001553	All Organisms → cellular organisms → Bacteria	13908	Open in IMG/M
3300031716\|Ga0310813_11120702	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	722	Open in IMG/M
3300031731\|Ga0307405_11242519	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	646	Open in IMG/M
3300031772\|Ga0315288_11023567	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	732	Open in IMG/M
3300031788\|Ga0302319_11026407	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	783	Open in IMG/M
3300031824\|Ga0307413_11595725	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	579	Open in IMG/M
3300031852\|Ga0307410_10289245	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	1289	Open in IMG/M
3300031852\|Ga0307410_10363698	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	1159	Open in IMG/M
3300031903\|Ga0307407_10798173	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	718	Open in IMG/M
3300031995\|Ga0307409_100068323	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae	2810	Open in IMG/M
3300031995\|Ga0307409_102484423	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	547	Open in IMG/M
3300031997\|Ga0315278_10303709	All Organisms → cellular organisms → Bacteria	1649	Open in IMG/M
3300032005\|Ga0307411_11282761	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	667	Open in IMG/M
3300032163\|Ga0315281_12181560	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	525	Open in IMG/M
3300033513\|Ga0316628_100728749	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	1303	Open in IMG/M
3300034009\|Ga0334944_005128	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	2531	Open in IMG/M
3300034030\|Ga0334952_000926	All Organisms → cellular organisms → Bacteria	12992	Open in IMG/M
3300034384\|Ga0372946_0159478	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	1079	Open in IMG/M
3300034819\|Ga0373958_0203152	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	520	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	62.18%
Host-Associated	Host-Associated	36.97%
Engineered	Engineered	0.84%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	48.74%
Plants	Host-Associated → Plants	36.97%
Aquatic	Environmental → Aquatic	13.45%
Solid Waste	Engineered → Solid Waste	0.84%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	45.38%
Rhizosphere	Host-Associated → Plants → Rhizosphere	26.89%
Rhizoplane	Host-Associated → Plants → Rhizoplane	9.24%
Freshwater	Environmental → Aquatic → Freshwater	8.40%
Peat	Environmental → Terrestrial → Peat	3.36%
Thermal Springs	Environmental → Aquatic → Thermal Springs	2.52%
Sediment	Environmental → Aquatic → Sediment	2.52%
Roots	Host-Associated → Plants → Roots	0.84%
Grass	Engineered → Solid Waste → Grass	0.84%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	36.13%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	15.97%
Soil	Host-Associated → Plants → Rhizosphere → Soil	10.92%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.88%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.20%
Lake	Environmental → Aquatic → Freshwater → Lake	3.36%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	3.36%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.36%
Ice	Environmental → Aquatic → Freshwater → Ice	2.52%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	2.52%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.52%
Loam	Environmental → Terrestrial → Soil → Loam	2.52%
Lentic	Environmental → Aquatic → Freshwater → Lentic	1.68%
Sand	Environmental → Terrestrial → Soil → Sand	1.68%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.84%
Soil Crust	Environmental → Terrestrial → Soil → Soil Crust	0.84%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.84%
Composting	Engineered → Solid Waste → Grass → Composting	0.84%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	15.97%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	14.29%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	12.61%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	10.92%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.88%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.20%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.36%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	3.36%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	3.36%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.36%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	2.52%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	2.52%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.52%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	1.68%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.68%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.68%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	1.68%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	0.84%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.84%
Unclassified	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified	0.84%
Desert	Environmental → Terrestrial → Soil → Unclassified → Desert	0.84%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.84%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.84%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.84%
Unclassified	Environmental → Terrestrial → Soil → Soil Crust → Unclassified	0.84%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.84%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.84%

Habitat	Taxonomy	Distribution
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	12.61%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	6.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	6.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.88%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.88%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	2.52%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	2.52%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.52%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.52%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	2.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.52%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	2.52%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.52%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.52%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	1.68%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.68%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.68%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	1.68%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	1.68%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.68%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.68%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.68%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	1.68%
Freshwater Microbial Mat	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Microbial Mat	0.84%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.84%
Hot Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Hot Spring	0.84%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.84%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.84%
Sub-Biocrust Soil	Environmental → Terrestrial → Soil → Unclassified → Desert → Sub-Biocrust Soil	0.84%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.84%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.84%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.84%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.84%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.84%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.84%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.84%
Biocrust	Environmental → Terrestrial → Soil → Soil Crust → Unclassified → Biocrust	0.84%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	0.84%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.84%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.84%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.84%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.84%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.84%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.84%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.84%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.84%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2119805009	Soil microbial communities from sample at FACE Site NTS_007 Nevada Test Site	Environmental	Open in IMG/M
2170459016	Litter degradation ZMR2	Engineered	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300003910	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - LWP11 LW	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300011333	Cornfield soil microbial communities from Stanford, California, USA - CI-CA-CRN metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012045	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ449 (21.06)	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012684	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ279 (21.06)	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015360	Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.BULKMAT1	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017787	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ497 (22.06) (version 2)	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300018890	Soil crust microbial communities from Colorado Plateau, Utah, USA - mid-late stage, bundles v1	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027639	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control (SPAdes)	Environmental	Open in IMG/M
3300027863	Hot spring thermophilic microbial communities from Obsidian Pool, Yellowstone National Park, USA - OP-RAMG-01 (SPAdes)	Environmental	Open in IMG/M
3300027885	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - LWP11 LW (SPAdes)	Environmental	Open in IMG/M
3300027886	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028889	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300030618	II_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031772	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_20	Environmental	Open in IMG/M
3300031788	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_2	Environmental	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300031997	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_0	Environmental	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300032163	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_0	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M
3300034009	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 40SMS	Environmental	Open in IMG/M
3300034030	Biocrust microbial communities from Mojave Desert, California, United States - 48SNC	Environmental	Open in IMG/M
3300034384	Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_KNG_2.2	Environmental	Open in IMG/M
3300034819	Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_1	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FNTS007_09738600	2119805009	Soil	SEVMRSEIALTLQHVLQIYTVGNFLKAWRNPKNHKSIEQVFDNPQQARHAAAVCAHWLGIKTLASPGTVAGWWRADEYPTPLSA
2ZMR_04460900	2170459016	Switchgrass, Maize And Mischanthus Litter	MNRNPILHLSLSDVLRREIALPLQQVLHLYTVGHFLSAWRNPRSKESIEQCFDSPQQARHAAATYAAWLGVPTPASRPVVTAWWRGDDQQAVSA
INPhiseqgaiiFebDRAFT_1017348322	3300000364	Soil	MSAMKNPVLSLSLSDVMRSEIAMPLQQVLQLYTVGCFLRAWRSPRGQKAIEQIFDTPEQARHAAATCAAWLGFNSRALHEPVPAWWVGDRVDGIAVNSVSQ*
JGI10216J12902_1057186772	3300000956	Soil	MGRNPILDLPLSEFMRAEIALPLQHVLKLYTVGSFLNAWRNPKNHRSIEQVFDTPQQARHAIAVCAAWLGVQSLASQPSVSPWWIGDQPMALSA*
JGI26437J51864_100010613	3300003910	Freshwater Lake Sediment	MSRNPVLDVPLTEVMRREIALPLQHMLQIYTVGNFLNAWRNLKSQRSIEQIFDSPQQARHAAATCAAWLGIPTRPSASGMPAWWTDEFRSASAQVS*
Ga0062593_1026772541	3300004114	Soil	MGRNPILDLPLNEFMRSEIALPLQHVLKLYTVGSFLNAWRNPKNHRSIEQVFDSPQQARHAIATCAAWLGVESRASQPSVSPWWIGDTPMALSA*
Ga0062589_1020685761	3300004156	Soil	CHAFNVWDDDTCGETGGGPMKNPVLTIPLSTVMRSEIALPLQHMLKLYTVGCFLKAWRNPKNHRSIEQIFDSPEQARHAAMTCAAWLGIRTHATHEPVAAWWVDESAMGSMAVA*
Ga0063356_1027428011	3300004463	Arabidopsis Thaliana Rhizosphere	MKNPVLTIPLSTVMRSEIALPLQHMLKLYTVGCFLKAWRNPKNHRSIEQIFDSPEQARHAAMTCAAWLGIRTHATHEPVAAWWVGDESAVMAMSA*
Ga0063356_1055764401	3300004463	Arabidopsis Thaliana Rhizosphere	MSSRNPILDLPLSEVMRSEIALTLQHVLQIYTVGNFLKAWRNPKNHKSIEQVFDNPQQARHAAAVCAHWLGIRTQASASSVAGWWRADDFPTLPA*
Ga0070670_1002320942	3300005331	Switchgrass Rhizosphere	MSSRNPILDLPLSEVMRPEIALTLQHVLQIYTVGNFLKAWRNPKNHKSIEQVFDNPQQARHAAAVCAHWLGIRTQASASSVAGWWRADNFPTLPA*
Ga0066388_1022204772	3300005332	Tropical Forest Soil	MGRKGVWLMARNPILDLPLSDVMRSEIALPLQHVLHLHTVGSLLNAWRNPRNHKSIEQVFDSPQQARHAIATCAAWLGVKTLATPNSNVSAWWHHEEPPASIGA*
Ga0070689_1019329121	3300005340	Switchgrass Rhizosphere	PVLTIPLSTIMRSEIALPLQHMLKLYTVGCFLKAWRNPKNHRSIEQIFDSPEQARHAAMTCAAWLGIRTQATHEPVAAWWVDESGMGRGGMALA*
Ga0070673_1017641821	3300005364	Switchgrass Rhizosphere	MVRNPILDLPLSAVMRNEIALPLQHVLKLYTVGSFLNAWRNPKNHRSIEQVFDSPQQARHAIATCAAWLGVESRASQPSVSPWWIGDTPMALSA*
Ga0070667_1017708411	3300005367	Switchgrass Rhizosphere	MSSRNPILDLPLSEVMRPEIALTLQHVLQIYTVGNFLKAWRNPKNHKSIEQVFDNPQQARHAAAVCAHWLGIRTQASASSVA
Ga0070741_102152591	3300005529	Surface Soil	MAKSAILDLPLSDFMRSEIALPLQHVLHLYTVGSLLRAWRSPRNQKSIEQIFDTPEQAHHAVAVCAAWLGIQPIASMSVPTQWWSEPARAAMQAQ*
Ga0068870_105691161	3300005840	Miscanthus Rhizosphere	MKNPVLTIPLSTVMRSEIALPLQHMLKLYTVGCFLKAWRNPKNHRSIEQIFDSPEQARHAAMTCAAWLGIRTHATHEPVAAWWVDESAMGSMAVA*
Ga0068863_1022258861	3300005841	Switchgrass Rhizosphere	AMKNPVLSLPLSAVMRSEIALPLQQMLNIYTVGCLLRAWRSPKGQKSIEKLFDTPEQARHAAATCAAWLGFDPRALHEPVPAWWLDEAQVGGGVAANLHNAA*
Ga0068862_1023905901	3300005844	Switchgrass Rhizosphere	MDASMKNPVLSLPLSTVMRSEIALPLQQMLNIYTVGCLLRAWRSPKRQRSIEKLFDTPEQARHAAATCAAWLGFNTQALHEPVPAWWVDEAQVASAPMQNAA*
Ga0070717_100247163	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MRPEIALPLQHVLQLYTVGSLLKAWRNPKNHKSIEQVFDSPQQARHAIAVCAAWLGVQSLAAPNTVAAWWDDRAAGFQSALKS*
Ga0066665_105162673	3300006796	Soil	MDASMKNPVLSLPLTAVMRMEIALPLQQMLNIYTVGCLLRAWRSPRSQKSIEKLFDTPEQARHAAATCAAWLGFNTAALHEPVPAWWVGDRATTVVMPVA*
Ga0075428_1013792161	3300006844	Populus Rhizosphere	MTTRNPVLDLPLNEVMKPDIALTLQHVLQIYTVGSFLKAWRNPRNHKSIEQVFNSPQEARHAAAICANWLGIRTLASPDSAIPGWWRNDEYPTMSA*
Ga0075431_1015833002	3300006847	Populus Rhizosphere	PGPRAGTMASARRVGKQVNTNRNPILDLPLSEVMRSEIALTLQHVLQIYTVGNFLKAWRNPKNHKSIEQVFDNPQQARHAAATCAHWLGIKTLASPDSVSGWWRADEFPALGA*
Ga0075420_1000627663	3300006853	Populus Rhizosphere	MASARRVGKQVNTNRNPILDLPLSEVMRSEIALTLQHVLQIYTVGNFLKAWRNPKNHKSIEQVFDNPQQARHAAATCAHWLGIKTLASPDSVSGWWRADEFPALGA*
Ga0079217_101794883	3300006876	Agricultural Soil	MFKNPILALPLTSVMRSEIALPLQQMLNLYTVGNFLNAWRNPKCQRSIEQVFQSPQQARHAAATCAAWLGVATLPSQPVPAWWRADEQLPS*
Ga0079217_102299932	3300006876	Agricultural Soil	MTRNPVLDLPLNEVMKPDIALTLQHILQIYTVGNFLKAWRNPKNHKSIEQVFSSPQEARHAAAICANWLGIRTLAAPDSAIPGWWRNDEYPSISA*
Ga0079217_113251181	3300006876	Agricultural Soil	MKNPVLTLPLSTVMRSEIALPLQHMLKLYTVGCFLKAWRNPKNHRSIEQIFDSPEQARHAAMTCAAWLGIRTQATHEPVPAWWAEESALAAMPAA
Ga0073928_100266373	3300006893	Iron-Sulfur Acid Spring	MSKHPVLDLPLAAVIRQEIALPLQHVLQLYTVGSLLKAWRNPKNHRGIERVFDTPEQARNAVAVCANWLGVQTLVGHEPVPAWWPGDERVPVGA*
Ga0079215_103084881	3300006894	Agricultural Soil	MSSRNPILDLPLSEVMRSEIAMTLQHVLQIYTVGNFLKAWRNPKNHKSIEQVFDNPQQARHAAAVCAHWLGIKTLASPGSVAGWWRADEYPAPLSA*
Ga0079215_109451042	3300006894	Agricultural Soil	MSSKNPVLDLPLNDVMRSEIALPLQHVLKLYSVGSLLNAWRNPKNHRSIEQVFDTPQQARHAIAVCAAWLGVQTLATPNPVPAWWVRDERVSSGLSH*
Ga0079216_100569631	3300006918	Agricultural Soil	MSSRNPILDLPLSEVMRSEIAMTLQHVLQIYTVGNFLKAWRNPKNHKSIEQVFDNPQQARHAAAVCAHWLGIKTLASPGSVAGWWRADEYPTPLSA*
Ga0079216_102500341	3300006918	Agricultural Soil	MTQNPVLDVSLSQIMRPEIALPLQHVLQIYTVGNFLRAWRNPKNHKNIEPLFDTPQQARHAAAVCAAWLGVRAPAQTTPPLSMGWWRPDDSVPAAA*
Ga0079216_111770371	3300006918	Agricultural Soil	MSSTTTKNPVLDLPLNDVMRSEIALPLQHVLKLYSVGSLLNAWRNPKNHRSIEQVFDTPQQARHAIAVCAAWLGVQTLATPDPVPAWWVRDEGVSTRLSH*
Ga0079218_105688262	3300007004	Agricultural Soil	MKNPVLTIPLSSVMRSEIALPLQHMLKLYTVGCFLKAWRNPKNHRHIEQIFDSPEQARHAAMTCAAWLGIRTQATHEPVPAWWVGDESQAMAMSA*
Ga0079218_117575212	3300007004	Agricultural Soil	MKNPVLSLPLSAVMRTEIALPLQHMLKLYTVGCFLKAWRNPKNHRSIEQIFDSPEQARHAAMICAAWLGIRTQATHEPVPAWWVGDEPAAMNAMPA*
Ga0079218_131310591	3300007004	Agricultural Soil	MKNPILSLPLTAVMREEIALPLQVMQIYTVGGFLKAWRSPKNHKMIEQIFDSPAQARHAAATCAGWLGVRTRAEHQPAIGW
Ga0079218_133449111	3300007004	Agricultural Soil	MTQNSVLDVPLSQVMRPEIALPLQHVLQIYTVGNFLRAWRNPKNHKNIEPLFDTPQQARHAAAVCAAWLGVRAPAQTTPPLSMGWWRPDDAVPAAA*
Ga0066710_1002393022	3300009012	Grasslands Soil	MKNPVLSLPLTAVMRTEIALPLQQVLNVYTVGCFLRAWRSPRSQRSIEQIFDTPEQARHAAATCAAWLGFNSRALHEPVPAWWVGEQIETLSHRAIE
Ga0075418_109109821	3300009100	Populus Rhizosphere	MENTKRGETGGGAMKNPVLTLPLSTVMRSEIALPLQHMLKLYTVGCFLKAWRNPKNHRSIEQIFDSPEQARHAAMTCAAWLGIRTQATHEPVAAWWVRDESAVMAMSA*
Ga0066709_1006904492	3300009137	Grasslands Soil	MDASMKNPVLSLPLTAVMRTEIALPLQQVLNVYTVGCFLRAWRSPRSQRSIEQIFDTPEQARHAAATCAAWLGFNSRALHEPVPAWWVGEQIETLSHRAIE*
Ga0111538_112911531	3300009156	Populus Rhizosphere	MGRNPILDLPLNEFMRSEIALPLQHVLKLYTVGSFLNAWRNPKNHRSIEQVFDSPQQARHAIATCAAWLGVESRASQPSVSPWWIGDAPMALSA*
Ga0111538_132407241	3300009156	Populus Rhizosphere	MKNPVLTIPLSTIMRSEIALPLQHMLKLYTVGCFLKAWRNPKNHRSIEQIFDSPEQARHAAMTCAAWLGIRTQATHEPVAA
Ga0126307_107638271	3300009789	Serpentine Soil	MTQKRVVATMKNPVLTIPLSTVMRSEIALPLQHMLKLYTVGCFLKAWRNPKNHRSIEQIFDSPEQARHAAMTCAAWLGIRTRAAHEPVPAWWAEESTLAAMPAA*
Ga0126313_110519382	3300009840	Serpentine Soil	MSRNPILDLPLNEVMRSEIALTLQHVLQIYTVGNFLKAWRNPKNHKSIEQVFDNPQQARHAAATCAHWLGIKTLASPGSVAGWWRA
Ga0126304_102747872	3300010037	Serpentine Soil	MHRNPVLDLPLTAVMRSEIALTLQHVLQIYTVGNFLKAWRNPKNHKSIEQVFDNPQQARHAAATCAHWLGIKTLASPGSVAGWWRADEYPALSA*
Ga0105239_126134101	3300010375	Corn Rhizosphere	MKNPVLSLPLSTVMRSEIALPLQHMLNIYTVGCLLRAWRSPKGRHNIEQIFDSPQQARHAAGVCAAWLGIHTHATFIPVSAWWDAEEPVAAKAA*
Ga0134126_100537719	3300010396	Terrestrial Soil	MLKNPVLDLPIGQVMRPEIALPLQHVLKIYTVGNFLNAWRSPKHQKNIEQVFDSPQQARHAAATCAAWLGVKTPVAPNPVPAWWPHDVAAPVVSC*
Ga0134126_101375052	3300010396	Terrestrial Soil	MGIMKHPVLSLPLSAVMRSEIALPLQYLLQIYTVGALLKAWQNERNHSHIERLFDSPEQAHHAVATCAAWLGVRTQVTHEPVPAWWVGEGDTAPGSVTASA*
Ga0134127_119497782	3300010399	Terrestrial Soil	MKNPVLTIPLSTIMRSEIALPLQHMLKLYTVGCFLKAWRNPKNHRSIEQIFDSPEQARHAAMTCAAWLGIRTQATHEPVAAWWVNESGMGRSGMAVA*
Ga0127502_112290261	3300011333	Soil	VVVAMKNPVLTIPLSSVMRSEIALPLQHMLQLYTVGCFLKAWRNPRNHKSIEQIFDTPEQARHAATTCAAWLGIRTPATHEVVPAWWAEESTVAAVHAA*
Ga0136623_103566361	3300012045	Polar Desert Sand	MKNTVLALPLSAIMRSEIALPLQHMLHLYTVGCFLRAWRNPRNHKSIEQIFDCPEQARHAAATCAAWLGIKTQASHEPVPAWWVRDEGAHAAIPAA*
Ga0150985_1085966261	3300012212	Avena Fatua Rhizosphere	MKNPVLTIQLSSVMRSEIALPLQHMLKLYTVGCFLKAWRNPKNHRSIEQIFDSPEQARHAAMTCAAWLGIRTHATHEPVAAWWVDEGTAAMMSAPAA*
Ga0150985_1199526342	3300012212	Avena Fatua Rhizosphere	MSRDKRAPDGGDGRSGIPTMKNPILDLPLSTVMRTEIALPLQQMMQIYTVGGFLKAWRSPKNHRTIEQIFDNPQQARHAATTCAAWLGIRTLADHKPIVPWWNGDEAGAGTSATVSA*
Ga0137371_103838302	3300012356	Vadose Zone Soil	MKNPVLSLSLGTVMRSEIALPLQQMLNIYTVGCFLRAWRSPKSQKCIERLFDTPEQARHAAATCAAWLGFATPATHEPVAAWWSGEENAEFRMQNAE*
Ga0150984_1151618601	3300012469	Avena Fatua Rhizosphere	MKNPVLTIPLSSVMRSEIALPLQHMLKLYTVGCFLKAWRNPKNHRSIEQIFDSPEQARHAAMTCAAWLGIRTHATHEPVAAWWVDEGTAAMMSAPAA*
Ga0150984_1175007502	3300012469	Avena Fatua Rhizosphere	MKNPILDLPLSTVMRTEIALPLQQMMQIYTVGGFLKAWRSPKNHRTIEQIFDNPQQARHAATTCAAWLGIRTLADHKPIVPWWNGDGAGAGTSATVSA*
Ga0136614_104663321	3300012684	Polar Desert Sand	MGSRNPILDLPLSEVMRSEIALTLQHVLQLYTVGNFLKAWRNPKNHKPIEQVFDTPEQARHAAATFAHWLGIKTLASPSTIPGWWRADEYPALSA*
Ga0157378_115107882	3300013297	Miscanthus Rhizosphere	MKNPILDLPLTAVMRSEIAMPLQQILRLYTVGCFLRAWRNPANHGRIEQVFDTPQQARHAAATCAAWLGVRKLPTLNTVPQWWPDETPSIGASA*
Ga0157378_117992661	3300013297	Miscanthus Rhizosphere	MKNPILDLPLTAVMRSEIAMPLQQILRLYTVGCFLRAWRNPANHSRIEQVFDTPQQARHAAAICAAWLGVRTLPTLNTVPQWWCDEAPAAGASA*
Ga0163162_102410852	3300013306	Switchgrass Rhizosphere	MKNPVLSLSLSDVMRPEIALPLQQMLNIYTVGCLLRAWRSPKSQRSIEKLFDSPEQARHAAATCAAWLGFDSRAIHEPVPAWWVDERAVDITGGMQNAA*
Ga0157375_133439691	3300013308	Miscanthus Rhizosphere	MDAAMKNPVLSLPLSAVMRSEIALPLQQMLNIYTVGCLLRAWRSPKGQKSIEKLFDTPEQARHAAATCAAWLGFDPRALHEPV
Ga0163163_132629302	3300014325	Switchgrass Rhizosphere	GRGVLAGESAAVAMKNPILALPLNTVMRPEIALPLQAMLDIYTVGGFLRAWRSPRTQKSIEHLFDSPEQARHAAMTCAAWLGIRTQATHEPVPAWWSGEEPVGSATAVA*
Ga0182015_106795301	3300014495	Palsa	MAKNPILDLSLNRVMRSEIALSLQVLRIHTVGSLLHAWRNPKNHHNIEQIFDSPEQARHALTTCSAWLGVQTPAIANPVPAWWAGDAPPSVGFNATLET*
Ga0182024_1000931811	3300014501	Permafrost	MSKSAILELPLSEVMRSEIALPLQHVLQLYTVGSLLNAWRNPRNHRSIEEVFDTPVQARHAIAVCAAWLGVPTPASPDTAGGWWETGSAEC*
Ga0182024_101829065	3300014501	Permafrost	MTKNPVLDLPLHQVMRPEIALTLQHVLQLYTVGSFLSAWRSPKSQRSIEQVFDTPQQARHAAAVCSTWLGIPTPAASRADGAWWNGEMGVSQ*
Ga0182030_107489001	3300014838	Bog	MYKNSILDLPLHHVMRPEIALTLQHVLQLYTVGNFLSAWRSPKNQRSIEQAFDTPQQARHAAAVCANWLGVPTAPVSHAAGAWWPSEDQPAANA*
Ga0173483_105562261	3300015077	Soil	MKNPILDLPLTAVMRSEIAMPLQQILKIYTVGCFLKAWRNPRNHKSLEQVFDTPEQARHAAAICAGWLGIRTLAQANPVPQWWVNDDGAAMDSSRAA*
Ga0163144_1000334425	3300015360	Freshwater Microbial Mat	MARNPVLDLPLSEFMRSEIALPLQYVLNLYTVGSLLRAWRNPKNHASIERVFDNRAQAHHAIAVCAAWLGINTHASVEQVSAWWVNDAVTSPMAGQPTTMNA*
Ga0132256_1024911401	3300015372	Arabidopsis Rhizosphere	MDDRTVFLFAHPFARTRAMDASMKNPVLSLPLSAVMRSEIALPLQQMLNIYTVGCLLRAWRSPKGQKSIEKLFDTPEQARHAAATCAAWLGF
Ga0132257_1025152002	3300015373	Arabidopsis Rhizosphere	FMRSEIALPLQHVLKLYTVGSFLNAWRNPKNHRSIEQVFDSPQQARHAIATCAAWLGVESRASQPSVSPWWIGDTPMALSA*
Ga0132255_1025279811	3300015374	Arabidopsis Rhizosphere	MDASMKNPVLSLPLSAVMRSEIALPLQQMLNIYTVGCLLRAWRSPKGQKSIEKLFDTPEQARHAAATCAAWLGFDPRALHEPVPAWWLDEAQVGGGVAANLHNAA*
Ga0183260_109693832	3300017787	Polar Desert Sand	VMRSEIALPLQHVLRIPTVGSLLNAWRNPKNHRSIEQVFDSPQQARHAIAVCAAWLGVQTPASSGTVRAWWTQDRSCQLSVASCQ
Ga0190269_114723472	3300018465	Soil	MSSKNPVLDLPLDNVMRSEIALPLQHVLKLYSVGSLLNAWRNPKNHRSIEQVFDTPQQARHAIAVCAAWLGVQSLATQPSVSPWWIGDQPMALSA
Ga0190268_116036261	3300018466	Soil	MRMSPSRNPILDLPLSEFMRSEIALPLQHVLKLPTVGSLLNAWRNPKNQRSIEQVFDCPQQARHAIAVCAAWLGVHTLASPGNVPAWWLRDEQHIAAAS
Ga0190274_101996771	3300018476	Soil	MKNPVLTIPLSSVMRSEIALPLQHMLKLYTVGCFLKAWRNPKNHRSIEQIFDSPEQARHAAMTCAAWLGIRTQATHQPVSAWWVDEGAMGSMAVA
Ga0190271_128542001	3300018481	Soil	RTRTHASRVVVAMKNPVLTIPLSSVMRSEIALPLQHMLQLYTVGCFLKAWRNPRNHKSIEQIFDTPEQARHAAMTCAAWLGIRTQATHEPVPAWWAEETSAVAMSA
Ga0193595_10043803	3300018890	Soil	MTRNPVLDLPLSTVMRSEIALPLQHVLNLYTVGSFLNAWRNPRNHKRIEQVFDNPQQARHAIAVCAAWLGVTTPASMEQNVVAWWQTDSGLRVDA
Ga0190267_110667121	3300019767	Soil	MTSRNPILDLPLSEVMRSEIALTLQHVLRLHTVGSLLNAWRNPKNHRSIEQVFDTPQQARHAIAVCAAWLGVQTLATPDPVPAWWVRDERDISSQWPVAGGQ
Ga0210396_100011563	3300021180	Soil	MSKNPILDVQLCAVMRSEIALPLQHVLHIYTVGGLLRAWRSPKNHRSIEQVFDSPEQARHAIAVCTAWLGIQTPASHEPVPAWWHGDDRVQLSA
Ga0210409_110005981	3300021559	Soil	MVGFVMSKNPILDVQLCAVMRSEIALPLQHVLHIYTVGGLLRAWRSPKNHRSIEQVFDSPEQARHAIAVCTAWLGIQTPASHEPVPAWWHGDDRVQLSA
Ga0212123_1001327011	3300022557	Iron-Sulfur Acid Spring	MSKHPVLDLPLAAVIRQEIALPLQHVLQLYTVGSLLKAWRNPKNHRGIERVFDTPEQARNAVAVCANWLGVQTLVGHEPVPAWWPGDERVPVGA
Ga0222622_101785182	3300022756	Groundwater Sediment	MKNPVLTIPLSTVMRSEIALPLQHMLKLYTVGCFLKAWRNPKNHRSIEQIFDSPEQARHAAMTCAAWLGIRTHATHEPVAAWWVGDESMAIAMSA
Ga0222622_102870253	3300022756	Groundwater Sediment	MKNPVLTIPLSTVMRSEIALPLQHMLKLYTVGCFLKAWRNPKNHRSIEQIFDSPEQARHAAMTCAAWLGIRTQATHEPVAA
Ga0222622_103118331	3300022756	Groundwater Sediment	MARNPILDLPLNDVMRAEIALPLQHVMRLYTVGSFLNAWRNPKNHKSIEQVFDNPQQARHAAATCAHWLGIRTLASPDSVSGWWRADEYPALSA
Ga0207650_101392392	3300025925	Switchgrass Rhizosphere	MGRNPILDLPLNEFMRSEIALPLQHVLKLYTVGSFLNAWRNPKNHRSIEQVFDSPQQARHAIATCAAWLGVESRASQPSVSPWWIGDTPMALSA
Ga0207650_105203041	3300025925	Switchgrass Rhizosphere	MSSRNPILDLPLSEVMRPEIALTLQHVLQIYTVGNFLKAWRNPKNHKSIEQVFDNPQQARHAAAVCAHWLGIRTQASASSVAGWWRADNFPTLPA
Ga0207659_101881391	3300025926	Miscanthus Rhizosphere	MKNPVLTIPLSTIMRSEIALPLQHMLKLYTVGCFLKAWRNPKNHRSIEQIFDSPEQARHAAMTCAAWLGIRTQATHEPVAAWWVDESGMGRGGM
Ga0207644_117251212	3300025931	Switchgrass Rhizosphere	DLPLNEFMRSEIALPLQHVLKLYTVGSFLNAWRNPKNHRSIEQVFDSPQQARHAIATCAAWLGVESRASQPSVSPWWIGDTPMALSA
Ga0207651_115486201	3300025960	Switchgrass Rhizosphere	VMRPEIALTLQHVLQIYTVGNFLKAWRNPKNHKSIEQVFDNPQQARHAAAVCAHWLGIRTQASASSVAGWWRADNFPTLPA
Ga0207658_118044172	3300025986	Switchgrass Rhizosphere	MARNPILDLPLNDVMRAEIALPLQHVMRLYTVGSFLNAWRNPKNHKSIEQVFDNPQQARHAAAVCAHWLGIRTQASASSVAGWWRADNFPTLPA
Ga0207641_123473042	3300026088	Switchgrass Rhizosphere	AMKNPVLSLPLSAVMRSEIALPLQQMLNIYTVGCLLRAWRSPKGQKSIEKLFDTPEQARHAAATCAAWLGFDPRALHEPVPAWWLDEAQVGGGVAANLHNAA
Ga0209387_11997681	3300027639	Agricultural Soil	MSSRNPILDLPLSEVMRSEIAMTLQHVLQIYTVGNFLKAWRNPKNHKSIEQVFDNPQQARHAAAVCAHWLGIKTLASPGSVAG
Ga0207433_100792153	3300027863	Hot Spring	MIKNPILSLPLNQVMRAEIALPLQQVLQLYTVGNFLSAWRNPKTQKYIEQVFDSPEQARHAAATCAAWLGVATRPTNSIPTAWWRTDEKLPHGPMSDVPAA
Ga0209450_1000000325	3300027885	Freshwater Lake Sediment	MSRNPVLDVPLTEVMRREIALPLQHMLQIYTVGNFLNAWRNLKSQRSIEQIFDSPQQARHAAATCAAWLGIPTRPSASGMPAWWTDEFRSASAQVS
Ga0209486_101230262	3300027886	Agricultural Soil	MTRNPVLDLPLNEVMKPDIALTLQHILQIYTVGNFLKAWRNPKNHKSIEQVFSSPQEARHAAAICANWLGIRTLAAPDSAIPGWWRNDEYPSISA
Ga0209486_101420462	3300027886	Agricultural Soil	MSSRNPILDLPLSEVMRSEIAMTLQHVLQIYTVGNFLKAWRNPKNHKSIEQVFDNPQQARHAAAVCAHWLGIKTLASPGSVAGWWRADEYPTPLSA
Ga0209382_103338231	3300027909	Populus Rhizosphere	MASARRVGKQVNTNRNPILDLPLSEVMRSEIALTLQHVLQIYTVGNFLKAWRNPKNHKSIEQVFDNPQQARHAAATCAHWLGIKTLASPDSVSGWWRADEFPALGA
Ga0247827_112429221	3300028889	Soil	MTQNSVLDVPLSQIMRPEIALPLQHVLQIYTVGNFLRAWRNPKNHKSIEQVFDNPQQAHHAAAVCAHWLGIKTLASPGSVAGWWRADEYPTPLSA
Ga0311340_104253132	3300029943	Palsa	MARNPILDLSLNQVMRSEIALSLQVLKIHTVGALLYAWRNPKNQRNIEQIFDSPEQARHALCTCSAWLGVVTPAIANPVPAWWLGDAPAAEGFSAVVLES
Ga0311354_113707711	3300030618	Palsa	MRSEIALSLQVLKIHTVGALLYAWRNPKNQRNIEQIFDSPEQARHALCTCSAWLGVVTPAIANPVPAWWLGDAPAAEGFSAVVLES
Ga0302325_132972982	3300031234	Palsa	LELPLTEVMRSEIALPLQHVLQLYTVGSLLNAWRNPRNHHCIEQVFDTPVQARHAIATCAAWLGVPTPASADPVSGWWDGGNAEC
Ga0307476_1000155311	3300031715	Hardwood Forest Soil	MCKNSILDVPLTSVMRPEIALPLQHVLQLYTVGSLLKAWRNPRNHRSIEQIFDSPEQARHALAVCAAWLGVQTQAAHEPVPAWWRGDERVQIGA
Ga0310813_111207021	3300031716	Soil	MKNPILDLPLTAVMRSEIAMPLQQILRLYTVGCFLRAWRNPANHSRIEQVFDTPQQARHAAAICAAWLGVRTLPTLNTVPQ
Ga0307405_112425191	3300031731	Rhizosphere	MKNPVLTIPLSSVMRSEIALPLQHMLQLYTVGCFLKAWRNPRNHKSIEQIFDTPEQARHAAMTCAAWLGIRTQATHE
Ga0315288_110235671	3300031772	Sediment	MAARNPILDLSLTAVMRSEIALPLQQVFGLYTVGSFLAAWRNPRFQRSIEQVFDSPQQAQHAAATCAAWLGTATSPAVSPVRAWWRQDEEGGPMLGV
Ga0302319_110264071	3300031788	Bog	MVKNPVLDLPVDHVMRSEIALPLQQVLKIYTVGQFLSAWRSPRQQRYIEQLFETPEQARHAASICAAWLGVRTLATPNPVPAWWAHDVDRPIASC
Ga0307413_115957251	3300031824	Rhizosphere	MKNPVLSISLSTVMRLEIALPLQHMLNIYTVGCFLKAWRNPRNQRSIEQIFDSPEQARHAAMTCAAWLGIRTQASHEPVPA
Ga0307410_102892451	3300031852	Rhizosphere	MSSRNPILDLPLSEVMRSEIAMTLQHVLQIYTVGNFLKAWRNPKNHKSIEQVFDNPQQAHHAAAVCAHWLGIKTLASPGSVAGWWRADEYPTPLSA
Ga0307410_103636981	3300031852	Rhizosphere	MKNPVLTIPLSSVMRSEIALPLQHMLQLYTVGCFLKAWRNPRNHKSIEQIFDTPEQARHAAMTCAAWLGIRTQATHEPVPAWWAEETAAVAMSA
Ga0307407_107981731	3300031903	Rhizosphere	RNPVLDLPLNQVMRPEIALTLQHVLQLHTVGSFLKAWRNPKNHKSIEQVFDTPEQARHAANICAAWLGIRTQATHTPMIGGWWKGDDAQQIQA
Ga0307409_1000683235	3300031995	Rhizosphere	MSRNPVLDLPLNQVMRPEIALTLQHVLQLHTVGSFLKAWRNPKNHKSIEQVFDTPEQARHAANICAAWLGIRTQATHTPMIGGWWKGDDAQQIQA
Ga0307409_1024844231	3300031995	Rhizosphere	EVMRSEIALTLQHVLQIYTVGNFLKAWRNPKNHKSIEQVFDSPQQARHAAATCAHWLGIKTLASPGSVAGWWRADEYPTPLSA
Ga0315278_103037092	3300031997	Sediment	MAPRNPILDLSLTAVMRSEIALPLQQVFGLYTVGSFLAAWRNPRFQRSIEQVFDSPQQAQHAAATCAAWLGTATSPAVSPVRAWWRQDEEGGPMLGV
Ga0307411_112827612	3300032005	Rhizosphere	SEIAMTLQHVLQIYTVGNFLKAWRNPKNHKSIEQVFDNPQQARHAAAVCAHWLGIKTLASPGSVAGWWRADEYPAPLSA
Ga0315281_121815602	3300032163	Sediment	PLTEVMRTEIALPLQQMLHVYTVGHFLSAWRNPRSQKSIVACFDTPQQARHAAATCAAWLGVSTPAAMNPVRAWWRGDERILDG
Ga0316628_1007287491	3300033513	Soil	MAKNPILGLSLTEILRPEIALPLQQMLHVYTVGHFLSAWRSPKSQKSIEQVFDSPQQARHAAATCAAWLGIGVPPSLCDNISAWWRKDRPIDG
Ga0334944_005128_1838_2122	3300034009	Sub-Biocrust Soil	MSRNPILDLPLSDVMRSEIALPLQHVLRLYTVGHLLNAWRNPKNQRSIEQVFDSAQQARHAIAVCAAWLGVQGHALATPVPAWWHRDDRVAVNA
Ga0334952_000926_337_621	3300034030	Biocrust	MKNPILSLPLTAVMREEIALPLHVMNIYTVGGFLKAWRSPKNHKMIEQIFDTPQQARHAAATCAAWLGVKTRAEHHNVGGWWKNETTGVGATQA
Ga0372946_0159478_355_639	3300034384	Soil	MGRNPILDLPLSEFMRAEIALPLQHVLKLYTVGSFLNAWRNPKNHRSIEQVFDTPQQARHAIAVCAAWLGVQSLASQPSVSPWWIGDQPIALSA
Ga0373958_0203152_169_453	3300034819	Rhizosphere Soil	MGRNPILDLPLNEFMRSEIALPLQHVLKLYTVGSFLNAWRNPKNHRSIEQVFDSPQQARHAIATCAAWLGVESRASQPSVSPWWIGDAPMALSA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F074637

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences