Metagenome / Metatranscriptome Family F074605

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F074605
Family Type	Metagenome / Metatranscriptome
Number of Sequences	119
Average Sequence Length	45 residues
Representative Sequence	MWRPNEPVEEDVSNLPGIDPHSKRRRSRRRAWRDGLADQTVVK
Number of Associated Samples	84
Number of Associated Scaffolds	119

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	98.32 %
% of genes near scaffold ends (potentially truncated)	99.16 %
% of genes from short scaffolds (< 2000 bps)	92.44 %
Associated GOLD sequencing projects	78
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.14

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (94.118 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (52.941 % of family members)
Environment Ontology (ENVO)	Unclassified (68.908 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (52.101 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 4.23% β-sheet: 0.00% Coil/Unstructured: 95.77%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.14
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.14
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 119 Family Scaffolds
PF06147	DUF968	74.79
PF13560	HTH_31	1.68
PF09588	YqaJ	1.68
PF13472	Lipase_GDSL_2	0.84
PF04055	Radical_SAM	0.84
PF01370	Epimerase	0.84
PF02543	Carbam_trans_N	0.84

COG ID	Name	Functional Category	% Frequency in 119 Family Scaffolds
COG2192	Predicted carbamoyl transferase, NodU family	General function prediction only [R]	0.84

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	94.12 %
Unclassified	root	N/A	5.88 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	94.12 %
Unclassified	root	N/A	5.88 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	94.12 %
Unclassified	root	N/A	5.88 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	94.12 %
Unclassified	root	N/A	5.88 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	11.76 %
Unclassified	root	N/A	5.88 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	10.08 %
Unclassified	root	N/A	5.88 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	5.88 %
Unclassified	root	N/A	5.88 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	5.88 %
Unclassified	root	N/A	5.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005332\|Ga0066388_101823189	All Organisms → cellular organisms → Bacteria → Proteobacteria	1083	Open in IMG/M
3300005332\|Ga0066388_101958481	All Organisms → cellular organisms → Bacteria → Proteobacteria	1048	Open in IMG/M
3300005332\|Ga0066388_102208354	All Organisms → cellular organisms → Bacteria → Proteobacteria	993	Open in IMG/M
3300005363\|Ga0008090_10030109	All Organisms → cellular organisms → Bacteria → Proteobacteria	2453	Open in IMG/M
3300005467\|Ga0070706_101741707	All Organisms → cellular organisms → Bacteria → Proteobacteria	567	Open in IMG/M
3300005552\|Ga0066701_10920662	All Organisms → cellular organisms → Bacteria → Proteobacteria	518	Open in IMG/M
3300005553\|Ga0066695_10443138	All Organisms → cellular organisms → Bacteria → Proteobacteria	801	Open in IMG/M
3300005713\|Ga0066905_101100602	All Organisms → cellular organisms → Bacteria → Proteobacteria	706	Open in IMG/M
3300005764\|Ga0066903_102587737	All Organisms → cellular organisms → Bacteria → Proteobacteria	983	Open in IMG/M
3300005764\|Ga0066903_102726440	All Organisms → cellular organisms → Bacteria → Proteobacteria	959	Open in IMG/M
3300005764\|Ga0066903_103130914	All Organisms → cellular organisms → Bacteria → Proteobacteria	895	Open in IMG/M
3300005764\|Ga0066903_103892160	All Organisms → cellular organisms → Bacteria → Proteobacteria	802	Open in IMG/M
3300005764\|Ga0066903_107250929	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	573	Open in IMG/M
3300005764\|Ga0066903_107410693	All Organisms → cellular organisms → Bacteria → Proteobacteria	567	Open in IMG/M
3300005764\|Ga0066903_107460785	All Organisms → cellular organisms → Bacteria → Proteobacteria	564	Open in IMG/M
3300006797\|Ga0066659_11404597	All Organisms → cellular organisms → Bacteria → Proteobacteria	583	Open in IMG/M
3300006845\|Ga0075421_101144061	All Organisms → cellular organisms → Bacteria → Proteobacteria	872	Open in IMG/M
3300006847\|Ga0075431_100343779	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1501	Open in IMG/M
3300006871\|Ga0075434_100653478	All Organisms → cellular organisms → Bacteria → Proteobacteria	1070	Open in IMG/M
3300006904\|Ga0075424_100477955	Not Available	1330	Open in IMG/M
3300009098\|Ga0105245_12824330	All Organisms → cellular organisms → Bacteria → Proteobacteria	538	Open in IMG/M
3300010048\|Ga0126373_11006619	All Organisms → cellular organisms → Bacteria → Proteobacteria	899	Open in IMG/M
3300010366\|Ga0126379_12758950	Not Available	587	Open in IMG/M
3300010398\|Ga0126383_12237406	All Organisms → cellular organisms → Bacteria → Proteobacteria	633	Open in IMG/M
3300010863\|Ga0124850_1134283	All Organisms → cellular organisms → Bacteria → Proteobacteria	600	Open in IMG/M
3300012198\|Ga0137364_11457686	All Organisms → cellular organisms → Bacteria → Proteobacteria	505	Open in IMG/M
3300012201\|Ga0137365_10427869	All Organisms → cellular organisms → Bacteria → Proteobacteria	975	Open in IMG/M
3300012209\|Ga0137379_11060201	All Organisms → cellular organisms → Bacteria → Proteobacteria	716	Open in IMG/M
3300012355\|Ga0137369_10241521	All Organisms → cellular organisms → Bacteria → Proteobacteria	1371	Open in IMG/M
3300012362\|Ga0137361_11002130	All Organisms → cellular organisms → Bacteria → Proteobacteria	755	Open in IMG/M
3300012923\|Ga0137359_10777775	All Organisms → cellular organisms → Bacteria → Proteobacteria	830	Open in IMG/M
3300016294\|Ga0182041_12089104	All Organisms → cellular organisms → Bacteria → Proteobacteria	528	Open in IMG/M
3300016319\|Ga0182033_10464475	All Organisms → cellular organisms → Bacteria → Proteobacteria	1082	Open in IMG/M
3300016341\|Ga0182035_11165363	All Organisms → cellular organisms → Bacteria → Proteobacteria	687	Open in IMG/M
3300016357\|Ga0182032_10506170	Not Available	994	Open in IMG/M
3300016371\|Ga0182034_10279286	All Organisms → cellular organisms → Bacteria → Proteobacteria	1330	Open in IMG/M
3300016371\|Ga0182034_10994310	All Organisms → cellular organisms → Bacteria → Proteobacteria	724	Open in IMG/M
3300016371\|Ga0182034_11849270	All Organisms → cellular organisms → Bacteria → Proteobacteria	532	Open in IMG/M
3300016387\|Ga0182040_11363168	All Organisms → cellular organisms → Bacteria → Proteobacteria	600	Open in IMG/M
3300016404\|Ga0182037_10351693	Not Available	1201	Open in IMG/M
3300016422\|Ga0182039_10238499	All Organisms → cellular organisms → Bacteria → Proteobacteria	1474	Open in IMG/M
3300016422\|Ga0182039_10512425	All Organisms → cellular organisms → Bacteria → Proteobacteria	1037	Open in IMG/M
3300016422\|Ga0182039_11792316	All Organisms → cellular organisms → Bacteria → Proteobacteria	562	Open in IMG/M
3300016445\|Ga0182038_10164983	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1708	Open in IMG/M
3300018433\|Ga0066667_10375940	All Organisms → cellular organisms → Bacteria → Proteobacteria	1140	Open in IMG/M
3300021168\|Ga0210406_10969877	All Organisms → cellular organisms → Bacteria → Proteobacteria	635	Open in IMG/M
3300021372\|Ga0213877_10097774	All Organisms → cellular organisms → Bacteria → Proteobacteria	889	Open in IMG/M
3300021560\|Ga0126371_12540388	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	620	Open in IMG/M
3300025910\|Ga0207684_10897108	All Organisms → cellular organisms → Bacteria → Proteobacteria	745	Open in IMG/M
3300027874\|Ga0209465_10614130	Not Available	538	Open in IMG/M
3300031543\|Ga0318516_10046907	All Organisms → cellular organisms → Bacteria → Proteobacteria	2341	Open in IMG/M
3300031543\|Ga0318516_10276350	All Organisms → cellular organisms → Bacteria → Proteobacteria	971	Open in IMG/M
3300031543\|Ga0318516_10648059	All Organisms → cellular organisms → Bacteria → Proteobacteria	601	Open in IMG/M
3300031545\|Ga0318541_10255339	All Organisms → cellular organisms → Bacteria → Proteobacteria	974	Open in IMG/M
3300031545\|Ga0318541_10683442	All Organisms → cellular organisms → Bacteria → Proteobacteria	573	Open in IMG/M
3300031572\|Ga0318515_10460138	All Organisms → cellular organisms → Bacteria → Proteobacteria	680	Open in IMG/M
3300031572\|Ga0318515_10540124	All Organisms → cellular organisms → Bacteria → Proteobacteria	621	Open in IMG/M
3300031573\|Ga0310915_10588925	All Organisms → cellular organisms → Bacteria → Proteobacteria	788	Open in IMG/M
3300031668\|Ga0318542_10742528	All Organisms → cellular organisms → Bacteria → Proteobacteria	514	Open in IMG/M
3300031679\|Ga0318561_10855747	All Organisms → cellular organisms → Bacteria → Proteobacteria	500	Open in IMG/M
3300031681\|Ga0318572_10575903	All Organisms → cellular organisms → Bacteria → Proteobacteria	671	Open in IMG/M
3300031723\|Ga0318493_10180737	All Organisms → cellular organisms → Bacteria → Proteobacteria	1106	Open in IMG/M
3300031724\|Ga0318500_10566602	All Organisms → cellular organisms → Bacteria → Proteobacteria	574	Open in IMG/M
3300031736\|Ga0318501_10161853	All Organisms → cellular organisms → Bacteria → Proteobacteria	1157	Open in IMG/M
3300031748\|Ga0318492_10184967	All Organisms → cellular organisms → Bacteria → Proteobacteria	1061	Open in IMG/M
3300031751\|Ga0318494_10129290	All Organisms → cellular organisms → Bacteria → Proteobacteria	1412	Open in IMG/M
3300031751\|Ga0318494_10798508	All Organisms → cellular organisms → Bacteria → Proteobacteria	553	Open in IMG/M
3300031751\|Ga0318494_10832095	All Organisms → cellular organisms → Bacteria → Proteobacteria	541	Open in IMG/M
3300031770\|Ga0318521_10143489	All Organisms → cellular organisms → Bacteria → Proteobacteria	1351	Open in IMG/M
3300031770\|Ga0318521_10277220	All Organisms → cellular organisms → Bacteria → Proteobacteria	984	Open in IMG/M
3300031770\|Ga0318521_10677853	All Organisms → cellular organisms → Bacteria → Proteobacteria	625	Open in IMG/M
3300031777\|Ga0318543_10241939	All Organisms → cellular organisms → Bacteria → Proteobacteria	804	Open in IMG/M
3300031779\|Ga0318566_10449230	All Organisms → cellular organisms → Bacteria → Proteobacteria	633	Open in IMG/M
3300031792\|Ga0318529_10045388	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1877	Open in IMG/M
3300031792\|Ga0318529_10099996	All Organisms → cellular organisms → Bacteria → Proteobacteria	1308	Open in IMG/M
3300031794\|Ga0318503_10047058	All Organisms → cellular organisms → Bacteria → Proteobacteria	1306	Open in IMG/M
3300031797\|Ga0318550_10342331	All Organisms → cellular organisms → Bacteria → Proteobacteria	725	Open in IMG/M
3300031798\|Ga0318523_10122948	All Organisms → cellular organisms → Bacteria → Proteobacteria	1282	Open in IMG/M
3300031819\|Ga0318568_10814176	All Organisms → cellular organisms → Bacteria → Proteobacteria	579	Open in IMG/M
3300031819\|Ga0318568_10915969	All Organisms → cellular organisms → Bacteria → Proteobacteria	542	Open in IMG/M
3300031833\|Ga0310917_10004053	All Organisms → cellular organisms → Bacteria → Proteobacteria	7435	Open in IMG/M
3300031833\|Ga0310917_10030242	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3199	Open in IMG/M
3300031835\|Ga0318517_10041048	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1905	Open in IMG/M
3300031845\|Ga0318511_10091865	All Organisms → cellular organisms → Bacteria → Proteobacteria	1281	Open in IMG/M
3300031845\|Ga0318511_10138021	All Organisms → cellular organisms → Bacteria → Proteobacteria	1060	Open in IMG/M
3300031845\|Ga0318511_10205023	All Organisms → cellular organisms → Bacteria → Proteobacteria	877	Open in IMG/M
3300031845\|Ga0318511_10234275	All Organisms → cellular organisms → Bacteria → Proteobacteria	822	Open in IMG/M
3300031845\|Ga0318511_10388952	All Organisms → cellular organisms → Bacteria → Proteobacteria	638	Open in IMG/M
3300031846\|Ga0318512_10165099	All Organisms → cellular organisms → Bacteria → Proteobacteria	1073	Open in IMG/M
3300031859\|Ga0318527_10062705	All Organisms → cellular organisms → Bacteria → Proteobacteria	1475	Open in IMG/M
3300031890\|Ga0306925_10584018	Not Available	1181	Open in IMG/M
3300031896\|Ga0318551_10960818	All Organisms → cellular organisms → Bacteria → Proteobacteria	500	Open in IMG/M
3300031897\|Ga0318520_10656344	All Organisms → cellular organisms → Bacteria → Proteobacteria	654	Open in IMG/M
3300031897\|Ga0318520_10933906	All Organisms → cellular organisms → Bacteria → Proteobacteria	547	Open in IMG/M
3300031897\|Ga0318520_10969030	All Organisms → cellular organisms → Bacteria → Proteobacteria	537	Open in IMG/M
3300031897\|Ga0318520_10992084	All Organisms → cellular organisms → Bacteria → Proteobacteria	530	Open in IMG/M
3300031910\|Ga0306923_10872982	All Organisms → cellular organisms → Bacteria → Proteobacteria	987	Open in IMG/M
3300031912\|Ga0306921_10700147	Not Available	1164	Open in IMG/M
3300031946\|Ga0310910_10208226	All Organisms → cellular organisms → Bacteria → Proteobacteria	1518	Open in IMG/M
3300031946\|Ga0310910_10550800	All Organisms → cellular organisms → Bacteria → Proteobacteria	915	Open in IMG/M
3300031946\|Ga0310910_11172539	All Organisms → cellular organisms → Bacteria → Proteobacteria	596	Open in IMG/M
3300031946\|Ga0310910_11201746	All Organisms → cellular organisms → Bacteria → Proteobacteria	588	Open in IMG/M
3300031954\|Ga0306926_10084095	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3876	Open in IMG/M
3300031954\|Ga0306926_10859242	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1089	Open in IMG/M
3300032010\|Ga0318569_10252118	All Organisms → cellular organisms → Bacteria → Proteobacteria	820	Open in IMG/M
3300032025\|Ga0318507_10467744	All Organisms → cellular organisms → Bacteria → Proteobacteria	549	Open in IMG/M
3300032039\|Ga0318559_10203594	All Organisms → cellular organisms → Bacteria → Proteobacteria	910	Open in IMG/M
3300032042\|Ga0318545_10041603	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1535	Open in IMG/M
3300032044\|Ga0318558_10110031	All Organisms → cellular organisms → Bacteria → Proteobacteria	1298	Open in IMG/M
3300032051\|Ga0318532_10063476	All Organisms → cellular organisms → Bacteria → Proteobacteria	1280	Open in IMG/M
3300032052\|Ga0318506_10194282	All Organisms → cellular organisms → Bacteria → Proteobacteria	895	Open in IMG/M
3300032055\|Ga0318575_10029909	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2374	Open in IMG/M
3300032059\|Ga0318533_10099690	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2008	Open in IMG/M
3300032066\|Ga0318514_10259852	All Organisms → cellular organisms → Bacteria → Proteobacteria	915	Open in IMG/M
3300032076\|Ga0306924_10090606	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3442	Open in IMG/M
3300032076\|Ga0306924_10098580	All Organisms → cellular organisms → Bacteria → Proteobacteria	3302	Open in IMG/M
3300032090\|Ga0318518_10254087	All Organisms → cellular organisms → Bacteria → Proteobacteria	902	Open in IMG/M
3300032091\|Ga0318577_10099227	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1362	Open in IMG/M
3300033290\|Ga0318519_10643938	All Organisms → cellular organisms → Bacteria → Proteobacteria	646	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.80%
Host-Associated	Host-Associated	4.20%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	95.80%
Plants	Host-Associated → Plants	4.20%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	95.80%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.20%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	83.19%
Loam	Environmental → Terrestrial → Soil → Loam	12.61%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.20%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	69.75%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	10.92%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	9.24%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.20%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.36%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.68%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.84%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	52.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	16.81%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	10.92%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.04%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.36%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.36%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.52%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.68%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	0.84%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.84%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.84%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.84%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010863	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (PacBio error correction)	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021372	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R01	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066388_1018231892	3300005332	Tropical Forest Soil	MMWRPNDPVEEDISTPLGIEPQGKHRRSHRRAWRDGLADQTVVLG
Ga0066388_1019584811	3300005332	Tropical Forest Soil	MWRPNELVDDDVSNIDQQGKRRRSGRRAWRDGLADQTVVQ
Ga0066388_1022083542	3300005332	Tropical Forest Soil	MWRPNEPVEEGVSDFPGIDRQSKRRRSRRSWRDGLAAQTVVRNL
Ga0008090_100301094	3300005363	Tropical Rainforest Soil	MWRPNEPVVEDISDLLGNSLQNKRRRSRRHAWRDGLADQTVVK
Ga0070706_1017417072	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MTAWRPIESVEDDVSALPDADPQNKRRPSRRRAWRDGLAAQ
Ga0066701_109206621	3300005552	Soil	MWRPNDPTREEISNVPGMDPQSKRRRSRRRAWRDGLADQTVVT
Ga0066695_104431381	3300005553	Soil	MTMWRSNEPVEDDISDLPGIDFQNKCRRARRRAWRDGLS
Ga0066905_1011006022	3300005713	Tropical Forest Soil	MWRPNERVVEDISDLPGNGPQNKRRRSRRRAWRDGLADQTVVKTLE
Ga0066903_1025877372	3300005764	Tropical Forest Soil	MTMWRPTEPAEEDVSDLPGIDPQSGRRRSRRRAWRD
Ga0066903_1027264401	3300005764	Tropical Forest Soil	MWRPNEPVEEDVSDLPGIDPHSKRCRSGRRAWRDGLADQTVVK
Ga0066903_1031309142	3300005764	Tropical Forest Soil	MWKPNEPIEEDISHVLGNDMQSKRRRSRRRAWRDGLADQTVVRNLED
Ga0066903_1038921602	3300005764	Tropical Forest Soil	MLEGVTTMWRPSEVVEEDVSNLSGIDPQGKRRQSRRRAWRDGLADQTVVKS
Ga0066903_1072509293	3300005764	Tropical Forest Soil	MWGPNEPLEEDVLDLPGPDPQNKRRRSRRRAWRDG
Ga0066903_1074106932	3300005764	Tropical Forest Soil	MWRPNEPAEEDVSNPSGIDPGSKRRRSQRQASRDGLAD
Ga0066903_1074607851	3300005764	Tropical Forest Soil	MTMWRPNEPVEDVSEPPGIDLQNKRRRSRRRAWRDGLADETVVGTLEHVRSYRAF
Ga0066659_114045972	3300006797	Soil	MWGPNDPTREEISNVPGMDPQSKRRRSRRRAWRDGLAD
Ga0075421_1011440612	3300006845	Populus Rhizosphere	MTMWRPTEPVEEDVSDLPGIDPQSKRRRSRRHRWRDGLADQTVV
Ga0075431_1003437791	3300006847	Populus Rhizosphere	MTMWRSNEPVEGDISDLPGIDFQNKCRRARRRAWRDGLSDQTVIKALES
Ga0075434_1006534782	3300006871	Populus Rhizosphere	MWSDPVEEDVSVPLDIGPQGKRRRSRRRAWRDGLADQTVVQGLE
Ga0075424_1004779551	3300006904	Populus Rhizosphere	MWSDPVEEDVSVPLDIGPQGKRRRSRRRAWRDGLADQTVVQGLEDVRSY
Ga0105245_128243302	3300009098	Miscanthus Rhizosphere	MWRPNEPVEEDVSDLPGIDPHSNRRRSRCRAWRDGLADQTVVKTLEDARSYRAF
Ga0126373_110066191	3300010048	Tropical Forest Soil	MTMWRPTEPAEEDVSDRPGIDPQSKRRRSRRRAWRDGLADQTVVTNLEDV
Ga0126379_127589502	3300010366	Tropical Forest Soil	MDARIVATWSPNEAVEEDVSDLPGIDPQSKRRRSRRRAWRDGLAD
Ga0126383_122374062	3300010398	Tropical Forest Soil	MWRPNEPVEEDVSGPLGIDPRGRRRRSAWRDGLADQTVVK
Ga0124850_11342831	3300010863	Tropical Forest Soil	MLEDAMWRPNEPSEEDVSDLPDPQSKRRRSRRRAWRDGL
Ga0137364_114576862	3300012198	Vadose Zone Soil	MAMWRPNEPGEENVSNRAGIDSQNKRRRSRRRAWRDGLRDQTVIQNP
Ga0137365_104278692	3300012201	Vadose Zone Soil	MWRPNESVEEGVSGLPGNDLQNKRRRSRRRAWRDGLADQTVVKALE
Ga0137379_110602012	3300012209	Vadose Zone Soil	MWRPNEAVEEDVSNLLGIDPQSNRRRSRRRAWRDGLADQTVVNSL
Ga0137369_102415212	3300012355	Vadose Zone Soil	MTMWRSNEPVEDNMSDLPGIDFQNECRRSRRRAWRDGLADQTVVKNFE
Ga0137361_110021302	3300012362	Vadose Zone Soil	MTMWRLNEPVEEDVSDLPGIDPHSKRRRSRCRAWRD
Ga0137359_107777751	3300012923	Vadose Zone Soil	MWRPNEPVEEDVSDLPGIDPHSKRHRSRRHAWRDGLAN
Ga0182041_120891041	3300016294	Soil	MWRPTEPAKEDVARLPGIDPRGKRRRPRRRAWRDGLADQTVVQTLED
Ga0182033_104644751	3300016319	Soil	MTMWRPNELAEEDVSDLPGIDPHSKRRRSRRRAWR
Ga0182035_111653631	3300016341	Soil	MTTWRPNEPVEENMLNLAGIDPQNNRRSRRRAWRVGLADQTVVGTLE
Ga0182032_105061702	3300016357	Soil	MTTWRPNEPVEENMLNLAGIDPQNNRRSRRRAWRV
Ga0182034_102792861	3300016371	Soil	MWRPAEPAEEDVSNLPGIDPHGKRHRSRRRAWRDGLADQTVVKTLEDV
Ga0182034_109943102	3300016371	Soil	MTMWRPTEPAEEDVSDLPGIDPRGKRRRSRRRAWRDRLAD
Ga0182034_118492702	3300016371	Soil	MWKPNEPVVEDISDLASNDMQSKRRRSRRRAWRDGLADETVVGTLE
Ga0182040_113631682	3300016387	Soil	MWRPTEPVEEDVSDLPGIDPHGKRRRSRRRAWRDGLADQTVVQNLEHVRSYRAYE
Ga0182037_103516932	3300016404	Soil	MTVWRPTEPVEEDLSDLPGIGPQSKRRRSRRRAWRDGLADQTVVKTL
Ga0182039_102384991	3300016422	Soil	MTMWRPAEPAEEDVSNLPGIDPHGKRHRSRRRAWRDGLA
Ga0182039_105124252	3300016422	Soil	MTMWRPTEPVEEDISDLPGIDPHGKRRRSRRRAWRDGL
Ga0182039_117923162	3300016422	Soil	MWRPNEPVEEDVSAPLGIDPQGKRRRSHRRAWRDGLAD
Ga0182038_101649833	3300016445	Soil	MTMWRPTEPAKEDVARLPGIDPRGKRRRPRRRAWRDGLADQTVVQTL
Ga0066667_103759402	3300018433	Grasslands Soil	MWRPNDPTREEISNVPGMDPQSKRRRSRRRAWRDGLADQTVVTTLE
Ga0210406_109698772	3300021168	Soil	MWKSNDPVEEDVSAPLGIDPQGKRSRSRRRAWRDGLADETVVQGVEDVR
Ga0213877_100977741	3300021372	Bulk Soil	MTMWRPNEPAEEDGSDLPGIGPHSKRRRSRRRAWRDGLADQTVVSSLED
Ga0126371_125403882	3300021560	Tropical Forest Soil	MVELPHHRPMTMWRLTEPAKEDVSDLPPIDPQSKRRRSRRRAWRDGLAD
Ga0207684_108971082	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MTAWRPIESVEDDVSALPDADPQNKRRSSRRRAWRDGLAAQTV
Ga0209465_106141301	3300027874	Tropical Forest Soil	MWKPNEPLEEDVLDLPGPDPQNKRRRSRRRAWRDGL
Ga0318516_100469074	3300031543	Soil	MWRPNEPVVEDISDLAGNDMQSKRRRSRRRAWRDGLADQT
Ga0318516_102763501	3300031543	Soil	MTMWRPTEPDEDDVSDLPGIDPQSKRRRSRRARCG
Ga0318516_106480591	3300031543	Soil	MWRPNEPAEEDISDLPGIDPQSKRRRSRHRDWRNGLADQTVVITLE
Ga0318541_102553391	3300031545	Soil	MWRPNEPVEEDGSNLGGIDPLGKRRRSRRGAWRDG
Ga0318541_106834421	3300031545	Soil	MWPNEPVEEDISHLPGNDMQSKRHRSRRAWRHGLADQTVIQVLE
Ga0318515_104601381	3300031572	Soil	MWRPNEPAEEDISDLPGIDPQSKRRRSRHRDWRNGLADQTV
Ga0318515_105401242	3300031572	Soil	MWPNEPVEEDISDVPDIGPENKRRRSRRRAWRDGLADQTVVRTLEEVRSY
Ga0310915_105889251	3300031573	Soil	MTMWRPNEAVEEDVSNLSSIDPQSERRRSRRRAWRDGLADQTVVR
Ga0318542_107425282	3300031668	Soil	MWRPTEPAEEDVSDLPGIDPHGKRRRSRRRAWRDGLADQTVVKTLENVRSYRAFE
Ga0318561_108557472	3300031679	Soil	MWRPAEPAEEDVSNLPGIDPHGKRHRSRRRAWRDGLADQTVVKTLE
Ga0318572_105759032	3300031681	Soil	MWRPNDPIVEDASAPLGIDPQGKRRRSRRRAWRDGLADQTVVQG
Ga0318493_101807371	3300031723	Soil	MWRPNEPVVEDISDLRGNDLQNKRRRSRRRAWRDGLADQTVVKVV
Ga0318500_105666021	3300031724	Soil	MWKPNEPVVEDISDLASNDMQSKRRRSRRRAWRDGLADQTVVKALEDVRSYR
Ga0318501_101618532	3300031736	Soil	MLEDAMWRPNERVEEDASDPPGIDPHSKRRRPRRRAWRDGLADQTVV
Ga0318492_101849672	3300031748	Soil	MWRPNEPVVEDISDLRGNDLQNKRRRSRRRAWRDGLADQTVVKV
Ga0318494_101292902	3300031751	Soil	MWRPNEAVEEDVSNLSSIDPQSERRRSRRRAWRDGLADQTVVRILEDVRSY
Ga0318494_107985081	3300031751	Soil	MWRPAEPAEEDVSNLPGIDPHGKRHRSRRRAWRDGLADQTVVKTLEDVR
Ga0318494_108320951	3300031751	Soil	MTMWRPNELAEEDVSDLPGIDPHSKRRRSRRRAWRDGLADQ
Ga0318521_101434891	3300031770	Soil	MWRPNEPVEEDVPHHAGIDLQNKRRRSRRRAWRDGLADETVV
Ga0318521_102772201	3300031770	Soil	MWRPNEPVVEDISDLRGNDLQNKRRRSRRRAWRDGLADQTVVKVVEDVRSY
Ga0318521_106778531	3300031770	Soil	MWPNEPVEEGVSEPPGIDPQSKRRRSRRRAWRGGLADQTVVQNFE
Ga0318543_102419391	3300031777	Soil	MWRPAEPAEEDVSNLPGIDPHGKRHRSRRRAWRDGLADQTVVKTLEDVRS
Ga0318566_104492303	3300031779	Soil	MWRPNEPAVEDISDLPGNGIQSKRRSRRRAWRDGLADQTVVQGLEDVR
Ga0318529_100453881	3300031792	Soil	MWRPNEPLEEDVSDLPGIDPHSKRCRSRRRPWRDGLADQTVVKTLEDARAY
Ga0318529_100999961	3300031792	Soil	MWRPNEAVEEDVSNLSSIDPQSERRRSRRRAWRDGLADQTVVRILEDVRSYR
Ga0318503_100470581	3300031794	Soil	MWRPNEPVVEDISDLRGNDLQNKRRRSRRRAWRDGLADQTVVKVVEDVRSYRAFE
Ga0318550_103423311	3300031797	Soil	MTIWRSNDPVEDDVSDLPGIDFQNTRRRSRRRGWRDGIADQTVVRTLEDAR
Ga0318523_101229482	3300031798	Soil	MTVWRPTEPVEEDLSDLPGIGPQSKRRRSRRRAWRDGLADQTVVTTLEHARSY
Ga0318568_108141762	3300031819	Soil	MWPNEPVEEDISDVPDIGPENKRRRSRRRAWRDGLADQTVVRTLE
Ga0318568_109159692	3300031819	Soil	MWRPNEPVVEDISDLRGNDLQNKRRRSRRRAWRDGLADETVVG
Ga0310917_1000405313	3300031833	Soil	MWRPNEPLEEDVSDLPGIDPHSKRCRSRRRPWRDGLADQTVVKTLEDARAYRAF
Ga0310917_100302421	3300031833	Soil	MWKPNEPVVEDISDLASNDMQSKRRRSRRRAWRDGLADQTVV
Ga0318517_100410481	3300031835	Soil	MWRPAKPTEEDVWNLPGIDPHGKRHRSRRRAWRDGLA
Ga0318511_100918652	3300031845	Soil	MTMWRPNEPVEDVSDPPGIDLQNKRRRSRRRAWREG
Ga0318511_101380212	3300031845	Soil	MWRPNEPVVEDASAPLGIDPQCKRRRSRRRAWRYGLADQTVVQNHE
Ga0318511_102050232	3300031845	Soil	MWRPNERVEEDASDPPGIDPHSKRRRPRRRAWRDGLADQTVVQGLEDVQSYRAFE
Ga0318511_102342752	3300031845	Soil	MMMWRPNEPVVEDISDLAGNDMQSKRYRSRRRAWRDGLA
Ga0318511_103889522	3300031845	Soil	MWRPTEPVEEDVSDLPGIDPHGKRRRSRRRAWRDGLAD
Ga0318512_101650992	3300031846	Soil	MWRPTEPAEDVSDPAGIDLQNKRRRSRRRAWRDGLADQTVVTTLEHVRS
Ga0318527_100627051	3300031859	Soil	MWRPAKPTEEDVWNLPGIDPHGKRHRSRRRAWRDGLADQTVVKTLEDVRSYRA
Ga0306925_105840181	3300031890	Soil	MTMWRPNEPVEEDVSNLPGIDPHSKRRRSRRRAWRDGLA
Ga0318551_109608181	3300031896	Soil	MLEDAMLRPNEPVEEDVSDLPGIDPHSKRRRSRRRAWRGLADQTVVKTLEDVRSYR
Ga0318520_106563441	3300031897	Soil	MDARIVAMWSPNEAVEEDVSDLPGIDPQSKRRRSRRRAWRDGL
Ga0318520_109339062	3300031897	Soil	MWPNEPVEEDISDVPDISPQSKRRRSRRRAWRDGLADQTVVRNVED
Ga0318520_109690302	3300031897	Soil	MWPNEPVEEDISDVSDIGPQSNRRRSRRRAWRDGLADQTVVRNVEEV
Ga0318520_109920841	3300031897	Soil	MMWRPNEPVEEDGSNLVGIHPQSTRSRSRRRAWRDGLADQTVVKTLEDVRSYRA
Ga0306923_108729822	3300031910	Soil	MWGPNEPIGENVSDVPGIDPQKRRRSRHRAWPDGLADQTVVKTLENIRSYRSFERTL
Ga0306921_107001472	3300031912	Soil	MTMWRPTEPAEEEVSDLPGIDPQGKRRRSRRRIWRDGLADQTVVTTLEHARSY
Ga0310910_102082262	3300031946	Soil	MWRPTEPAEEDVLNLPGIDPLSKRRQSRRRAWRDGLADQTV
Ga0310910_105508002	3300031946	Soil	MTMWRPTEPVEADVSDLPDIDPHSKRGRSRRRAWRDGLADQTVVKTL
Ga0310910_111725392	3300031946	Soil	MWPNEPVEEDISHLPGNDMQSKRHRSRRAWRHGLADQTVIQVLEDAR
Ga0310910_112017462	3300031946	Soil	MWRPNETVEGDVSDLLGIDPPNKRRRSRRRAWRDGLADQTVVRNVEEVRP
Ga0306926_100840951	3300031954	Soil	MTMWRPNELAEEDVSDLPGIDPYSKRRRSRRRAWRDGLA
Ga0306926_108592421	3300031954	Soil	MTMWRPNEPAEEDISDLPGIDPQSKRRRSRHRDWRNGLADQTVVITLEHVRS
Ga0318569_102521181	3300032010	Soil	MWRPNEPVEEDVPHHAGIDLQNKRRRSRRRAWRDGLADETVVSNLE
Ga0318507_104677442	3300032025	Soil	MWPNEPVEEDISDVPDIGPENKRRRSRRRAWRDGLADQTVVRTLEEVRS
Ga0318559_102035942	3300032039	Soil	MTVWRPTEPVEEDLSDLPGIGPQSKRRRSRRRAWRDGLADQTVVTTLEHA
Ga0318545_100416033	3300032042	Soil	MWRPNEPVVEDISDLRGNDLQNKRRRSRRRAWRDGLADQTVVKVVEDVRSYRA
Ga0318558_101100312	3300032044	Soil	MTMWRPNEAVEEDVSNLSSIDPQSERRRSRRRAWRDGLADQTVVRILEDVRSYR
Ga0318532_100634762	3300032051	Soil	MWRPNEPVEEDVSAPLGIDPQGKRRRSHRRAWRDGLADQTVVQNLEDVRAY
Ga0318506_101942822	3300032052	Soil	MTMWRPTEPAEDDVSDLPPIDPQSKRRRSRRRAWGDG
Ga0318575_100299093	3300032055	Soil	MWRPTEPAEDVSDPAGIDLQNKRRRSRRRAWRDGLADQTVVTTL
Ga0318533_100996901	3300032059	Soil	MWPNEPVEEGVSEPPGIDPQSKRRRSRRRAWRGGLADQTVVQNFEDARAYR
Ga0318514_102598522	3300032066	Soil	MWRPNEPVVEDISDLRGNDLQNKRRRSRRRAWRDGLADETVVGTLEHVR
Ga0306924_100906062	3300032076	Soil	MWRPNEPVEEDVSDLPGIDPHSKRRRSRRGAWRDGLADQTVVRTLAGC
Ga0306924_100985804	3300032076	Soil	MWRPNEPVEEDVSNLPGIDPHSKRRRSRRRAWRDGLADQTVVK
Ga0318518_102540872	3300032090	Soil	MTMWRPAKPTEEDVWNLPGIDPHGKRHRSRRRAWRDGLADQTVV
Ga0318577_100992271	3300032091	Soil	MTMWRPTEPAKEDVARLPGIDPRGKRRRPRRRAWRDGLADQTVVQT
Ga0318519_106439381	3300033290	Soil	MWRPNEPIGENVSDVPGIDPQSKRRRSRHRAWRDGLADQTVVKTLENVRSYRS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F074605

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences