Metagenome / Metatranscriptome Family F074322

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F074322
Family Type	Metagenome / Metatranscriptome
Number of Sequences	119
Average Sequence Length	123 residues
Representative Sequence	MTRRYWIVLALVWSACSQPPRSAETLLPASIGGVWQRKSLRDIPPPKPTILRAFEAGYEGAGKLTVDLYEAKVSGTAFEMTQHWRESPNTVFFDKGRYFVVVKWEQADRQALTAFVRALQKELAE
Number of Associated Samples	89
Number of Associated Scaffolds	119

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	14.29 %
% of genes near scaffold ends (potentially truncated)	26.05 %
% of genes from short scaffolds (< 2000 bps)	64.71 %
Associated GOLD sequencing projects	81
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.77

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (91.597 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland (24.370 % of family members)
Environment Ontology (ENVO)	Unclassified (47.059 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (47.899 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 24.18% β-sheet: 30.72% Coil/Unstructured: 45.10%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.77
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.77
Powered by PDBe Molstar

SCOP family	SCOP domain	Representative PDB	TM-score
d.312.1.1: TM1622-like	d1vr8a1	1vr8	0.66
d.107.1.1: Mog1p/PsbP-like	d1jhsa_	1jhs	0.62
c.94.1.0: Periplasmic binding protein-like II	d4p8ba_	4p8b	0.57
d.83.2.1: Activator of Hsp90 ATPase, Aha1	d1usub_	1usu	0.56
c.94.1.0: Periplasmic binding protein-like II	d4mx6a_	4mx6	0.56

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 119 Family Scaffolds
PF01138	RNase_PH	23.53
PF03725	RNase_PH_C	8.40
PF01725	Ham1p_like	7.56
PF04255	DUF433	5.04
PF06463	Mob_synth_C	3.36
PF00583	Acetyltransf_1	1.68
PF04055	Radical_SAM	1.68
PF13592	HTH_33	1.68
PF12704	MacB_PCD	1.68
PF14261	DUF4351	1.68
PF02894	GFO_IDH_MocA_C	1.68
PF14685	Tricorn_PDZ	0.84
PF07635	PSCyt1	0.84
PF00155	Aminotran_1_2	0.84
PF13369	Transglut_core2	0.84
PF03576	Peptidase_S58	0.84
PF14559	TPR_19	0.84
PF02954	HTH_8	0.84
PF00005	ABC_tran	0.84
PF07592	DDE_Tnp_ISAZ013	0.84
PF01833	TIG	0.84
PF00076	RRM_1	0.84
PF01479	S4	0.84
PF00158	Sigma54_activat	0.84
PF02452	PemK_toxin	0.84
PF17131	LolA_like	0.84
PF12740	Chlorophyllase2	0.84
PF01914	MarC	0.84
PF00510	COX3	0.84
PF13378	MR_MLE_C	0.84
PF00085	Thioredoxin	0.84

COG ID	Name	Functional Category	% Frequency in 119 Family Scaffolds
COG0689	Ribonuclease PH	Translation, ribosomal structure and biogenesis [J]	31.93
COG1185	Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase)	Translation, ribosomal structure and biogenesis [J]	31.93
COG2123	Exosome complex RNA-binding protein Rrp42, RNase PH superfamily	Intracellular trafficking, secretion, and vesicular transport [U]	31.93
COG0127	Inosine/xanthosine triphosphate pyrophosphatase, all-alpha NTP-PPase family	Nucleotide transport and metabolism [F]	7.56
COG2442	Predicted antitoxin component of a toxin-antitoxin system, DUF433 family	Defense mechanisms [V]	5.04
COG2896	GTP 3',8-cyclase (molybdenum cofactor biosynthesis protein MoaA)	Coenzyme transport and metabolism [H]	3.36
COG0673	Predicted dehydrogenase	General function prediction only [R]	1.68
COG3191	L-aminopeptidase/D-esterase	Amino acid transport and metabolism [E]	1.68
COG1845	Heme/copper-type cytochrome/quinol oxidase, subunit 3	Energy production and conversion [C]	0.84
COG2095	Small neutral amino acid transporter SnatA, MarC family	Amino acid transport and metabolism [E]	0.84
COG2337	mRNA-degrading endonuclease MazF, toxin component of the MazEF toxin-antitoxin module	Defense mechanisms [V]	0.84

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	91.60 %
Unclassified	root	N/A	8.40 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	91.60 %
Unclassified	root	N/A	8.40 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	91.60 %
Unclassified	root	N/A	8.40 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	68.07 %
Unclassified	root	N/A	8.40 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.52 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.68 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	59.66 %
Unclassified	root	N/A	8.40 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2.52 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	1.68 %

Name	Rank	Taxonomy	Distribution
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	17.65 %
Unclassified	root	N/A	8.40 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2.52 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.68 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1.68 %

Name	Rank	Taxonomy	Distribution
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	16.81 %
Unclassified	root	N/A	8.40 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	2.52 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.68 %
Desulfobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales	1.68 %
unclassified Bryobacterales	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales	0.84 %

Name	Rank	Taxonomy	Distribution
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	15.13 %
Unclassified	root	N/A	8.40 %
Microbacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	2.52 %
Candidatus Sulfopaludibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter	1.68 %
Desulfobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	1.68 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.68 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	0.84 %

Name	Rank	Taxonomy	Distribution
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	14.29 %
Unclassified	root	N/A	8.40 %
Curtobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Curtobacterium	2.52 %
Desulfatirhabdium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfatirhabdium	1.68 %
unclassified Candidatus Sulfopaludibacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter	1.68 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.68 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	0.84 %

Name	Rank	Taxonomy	Distribution
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	14.29 %
Unclassified	root	N/A	8.40 %
unclassified Curtobacterium	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Curtobacterium → unclassified Curtobacterium	2.52 %
Desulfatirhabdium butyrativorans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfatirhabdium → Desulfatirhabdium butyrativorans	1.68 %
Candidatus Sulfopaludibacter sp. SbA3	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	1.68 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.68 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	0.84 %

Name	Rank	Taxonomy	Distribution
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	14.29 %
Unclassified	root	N/A	8.40 %
Curtobacterium sp. ER1/6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Curtobacterium → unclassified Curtobacterium → Curtobacterium sp. ER1/6	2.52 %
Desulfatirhabdium butyrativorans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfatirhabdium → Desulfatirhabdium butyrativorans	1.68 %
Candidatus Sulfopaludibacter sp. SbA3	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	1.68 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.68 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	0.84 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001175\|JGI12649J13570_1010905	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	1065	Open in IMG/M
3300005538\|Ga0070731_10579179	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	747	Open in IMG/M
3300005591\|Ga0070761_10002846	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	10508	Open in IMG/M
3300005712\|Ga0070764_10479268	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	745	Open in IMG/M
3300005921\|Ga0070766_10050348	All Organisms → cellular organisms → Bacteria → Acidobacteria	2339	Open in IMG/M
3300005921\|Ga0070766_10356477	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	950	Open in IMG/M
3300005952\|Ga0080026_10251049	Not Available	534	Open in IMG/M
3300005995\|Ga0066790_10021694	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2807	Open in IMG/M
3300006052\|Ga0075029_100503667	Not Available	800	Open in IMG/M
3300006086\|Ga0075019_11089800	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	518	Open in IMG/M
3300006102\|Ga0075015_100936032	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	527	Open in IMG/M
3300006162\|Ga0075030_100056107	All Organisms → cellular organisms → Bacteria	3279	Open in IMG/M
3300006162\|Ga0075030_100102497	All Organisms → cellular organisms → Bacteria	2333	Open in IMG/M
3300009098\|Ga0105245_10547097	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1179	Open in IMG/M
3300009177\|Ga0105248_13269398	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	515	Open in IMG/M
3300009522\|Ga0116218_1100178	All Organisms → cellular organisms → Bacteria	1319	Open in IMG/M
3300009623\|Ga0116133_1056713	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	972	Open in IMG/M
3300009628\|Ga0116125_1124949	All Organisms → cellular organisms → Bacteria	701	Open in IMG/M
3300009635\|Ga0116117_1168928	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	569	Open in IMG/M
3300009638\|Ga0116113_1186180	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M
3300009665\|Ga0116135_1003469	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	6710	Open in IMG/M
3300009762\|Ga0116130_1188873	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	652	Open in IMG/M
3300010379\|Ga0136449_100014050	All Organisms → cellular organisms → Bacteria	21522	Open in IMG/M
3300010379\|Ga0136449_100076166	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7126	Open in IMG/M
3300010379\|Ga0136449_103225198	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	630	Open in IMG/M
3300013297\|Ga0157378_10624588	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	1091	Open in IMG/M
3300014152\|Ga0181533_1047967	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	2237	Open in IMG/M
3300014156\|Ga0181518_10001866	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	21074	Open in IMG/M
3300014156\|Ga0181518_10113044	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1500	Open in IMG/M
3300014160\|Ga0181517_10370301	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	740	Open in IMG/M
3300014161\|Ga0181529_10250151	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1011	Open in IMG/M
3300014162\|Ga0181538_10065161	Not Available	2221	Open in IMG/M
3300014167\|Ga0181528_10067680	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1962	Open in IMG/M
3300014168\|Ga0181534_10002589	All Organisms → cellular organisms → Bacteria	11101	Open in IMG/M
3300014200\|Ga0181526_10354317	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	933	Open in IMG/M
3300014200\|Ga0181526_10936432	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	545	Open in IMG/M
3300014201\|Ga0181537_10388646	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	957	Open in IMG/M
3300014489\|Ga0182018_10008995	All Organisms → cellular organisms → Bacteria → Acidobacteria	7389	Open in IMG/M
3300014489\|Ga0182018_10047979	All Organisms → cellular organisms → Bacteria	2624	Open in IMG/M
3300014489\|Ga0182018_10317520	Not Available	844	Open in IMG/M
3300014491\|Ga0182014_10047951	All Organisms → cellular organisms → Bacteria → Acidobacteria	2982	Open in IMG/M
3300014492\|Ga0182013_10077118	All Organisms → cellular organisms → Bacteria	2353	Open in IMG/M
3300014492\|Ga0182013_10109265	All Organisms → cellular organisms → Bacteria	1842	Open in IMG/M
3300014493\|Ga0182016_10029526	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	4653	Open in IMG/M
3300014495\|Ga0182015_10010479	All Organisms → cellular organisms → Bacteria → Acidobacteria	8455	Open in IMG/M
3300014501\|Ga0182024_11889355	Not Available	664	Open in IMG/M
3300014657\|Ga0181522_10096698	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfatirhabdium → Desulfatirhabdium butyrativorans	1702	Open in IMG/M
3300016750\|Ga0181505_11027405	Not Available	1019	Open in IMG/M
3300017934\|Ga0187803_10102509	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1124	Open in IMG/M
3300017940\|Ga0187853_10467799	Not Available	553	Open in IMG/M
3300017941\|Ga0187850_10211518	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	884	Open in IMG/M
3300017946\|Ga0187879_10075286	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1956	Open in IMG/M
3300017946\|Ga0187879_10077616	All Organisms → cellular organisms → Bacteria	1922	Open in IMG/M
3300017946\|Ga0187879_10206907	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1099	Open in IMG/M
3300017948\|Ga0187847_10001876	All Organisms → cellular organisms → Bacteria	17908	Open in IMG/M
3300017948\|Ga0187847_10039143	All Organisms → cellular organisms → Bacteria → Acidobacteria	2768	Open in IMG/M
3300017948\|Ga0187847_10125857	All Organisms → cellular organisms → Bacteria	1405	Open in IMG/M
3300017988\|Ga0181520_10045294	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	4278	Open in IMG/M
3300017988\|Ga0181520_11070902	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	531	Open in IMG/M
3300018008\|Ga0187888_1299838	Not Available	618	Open in IMG/M
3300018033\|Ga0187867_10023740	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	3908	Open in IMG/M
3300018033\|Ga0187867_10083403	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	1875	Open in IMG/M
3300018034\|Ga0187863_10757225	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	550	Open in IMG/M
3300018035\|Ga0187875_10026402	All Organisms → cellular organisms → Bacteria	3499	Open in IMG/M
3300018035\|Ga0187875_10099825	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfatirhabdium → Desulfatirhabdium butyrativorans	1650	Open in IMG/M
3300018035\|Ga0187875_10134563	All Organisms → cellular organisms → Bacteria	1390	Open in IMG/M
3300018035\|Ga0187875_10285447	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	895	Open in IMG/M
3300018038\|Ga0187855_10011855	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	5856	Open in IMG/M
3300018038\|Ga0187855_10018674	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	4557	Open in IMG/M
3300018038\|Ga0187855_10257031	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1024	Open in IMG/M
3300018040\|Ga0187862_10037494	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	3609	Open in IMG/M
3300018042\|Ga0187871_10255904	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	972	Open in IMG/M
3300018042\|Ga0187871_10412464	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	746	Open in IMG/M
3300018043\|Ga0187887_10462859	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	748	Open in IMG/M
3300018044\|Ga0187890_10532354	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	661	Open in IMG/M
3300018044\|Ga0187890_10554069	All Organisms → cellular organisms → Bacteria	647	Open in IMG/M
3300018046\|Ga0187851_10004434	All Organisms → cellular organisms → Bacteria → Acidobacteria	11447	Open in IMG/M
3300018047\|Ga0187859_10264166	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	926	Open in IMG/M
3300018057\|Ga0187858_10465017	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	778	Open in IMG/M
3300018086\|Ga0187769_10720929	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	754	Open in IMG/M
3300018090\|Ga0187770_10470185	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	993	Open in IMG/M
3300021406\|Ga0210386_10918321	Not Available	749	Open in IMG/M
3300022524\|Ga0224534_1004086	All Organisms → cellular organisms → Bacteria	5888	Open in IMG/M
3300025612\|Ga0208691_1003843	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	4610	Open in IMG/M
3300025927\|Ga0207687_10437524	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	1082	Open in IMG/M
3300026294\|Ga0209839_10021012	All Organisms → cellular organisms → Bacteria	2563	Open in IMG/M
3300027604\|Ga0208324_1075639	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	957	Open in IMG/M
3300027853\|Ga0209274_10005183	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	6006	Open in IMG/M
3300027869\|Ga0209579_10617679	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	588	Open in IMG/M
3300027911\|Ga0209698_10005036	All Organisms → cellular organisms → Bacteria → Acidobacteria	14370	Open in IMG/M
3300027911\|Ga0209698_10094827	All Organisms → cellular organisms → Bacteria	2506	Open in IMG/M
3300028773\|Ga0302234_10194677	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	878	Open in IMG/M
3300029911\|Ga0311361_10253764	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2055	Open in IMG/M
3300029939\|Ga0311328_10604146	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	755	Open in IMG/M
3300029943\|Ga0311340_10101224	All Organisms → cellular organisms → Bacteria	3171	Open in IMG/M
3300029951\|Ga0311371_10189976	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	3067	Open in IMG/M
3300029951\|Ga0311371_11289463	All Organisms → cellular organisms → Bacteria → Acidobacteria	834	Open in IMG/M
3300029999\|Ga0311339_11023635	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	772	Open in IMG/M
3300030007\|Ga0311338_10738382	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	990	Open in IMG/M
3300030053\|Ga0302177_10202584	All Organisms → cellular organisms → Bacteria	1093	Open in IMG/M
3300030617\|Ga0311356_11755005	All Organisms → cellular organisms → Bacteria → Acidobacteria	554	Open in IMG/M
3300030618\|Ga0311354_10166321	All Organisms → cellular organisms → Bacteria	2391	Open in IMG/M
3300030618\|Ga0311354_11518064	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	592	Open in IMG/M
3300031234\|Ga0302325_10263717	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	2849	Open in IMG/M
3300031234\|Ga0302325_10975660	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Curtobacterium → unclassified Curtobacterium → Curtobacterium sp. ER1/6	1162	Open in IMG/M
3300031236\|Ga0302324_101150443	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Curtobacterium → unclassified Curtobacterium → Curtobacterium sp. ER1/6	1039	Open in IMG/M
3300031524\|Ga0302320_10360094	All Organisms → cellular organisms → Bacteria → Acidobacteria	1869	Open in IMG/M
3300031524\|Ga0302320_11766840	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	592	Open in IMG/M
3300031525\|Ga0302326_11000546	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1175	Open in IMG/M
3300031525\|Ga0302326_12449859	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	657	Open in IMG/M
3300032160\|Ga0311301_10090794	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	6107	Open in IMG/M
3300032805\|Ga0335078_10027390	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	8454	Open in IMG/M
3300032805\|Ga0335078_10031902	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	7826	Open in IMG/M
3300032805\|Ga0335078_10468840	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	1629	Open in IMG/M
3300032828\|Ga0335080_10312724	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Curtobacterium → unclassified Curtobacterium → Curtobacterium sp. ER1/6	1703	Open in IMG/M
3300032892\|Ga0335081_10642868	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	1299	Open in IMG/M
3300032895\|Ga0335074_10007446	All Organisms → cellular organisms → Bacteria	15183	Open in IMG/M
3300033158\|Ga0335077_11814603	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	572	Open in IMG/M
3300033887\|Ga0334790_074724	Not Available	1166	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.64%
Host-Associated	Host-Associated	3.36%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	48.74%
Terrestrial	Environmental → Terrestrial	47.90%
Plants	Host-Associated → Plants	3.36%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	42.86%
Soil	Environmental → Terrestrial → Soil	30.25%
Peat	Environmental → Terrestrial → Peat	17.65%
Sediment	Environmental → Aquatic → Sediment	5.88%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.36%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	42.86%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	17.65%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	17.65%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	7.56%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.88%
Loam	Environmental → Terrestrial → Soil → Loam	5.04%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.36%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	36.13%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	17.65%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	10.08%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	7.56%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	6.72%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	5.88%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.88%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.04%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.36%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.84%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.84%

Habitat	Taxonomy	Distribution
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	24.37%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	12.61%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	11.76%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	5.88%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	5.88%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	5.88%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	5.04%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	4.20%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	3.36%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	3.36%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	3.36%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.68%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.68%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	1.68%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	1.68%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.68%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.84%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.84%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.84%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.84%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.84%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.84%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001175	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O3	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300005952	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045	Environmental	Open in IMG/M
3300005995	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009623	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10	Environmental	Open in IMG/M
3300009628	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_10	Environmental	Open in IMG/M
3300009635	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_10	Environmental	Open in IMG/M
3300009638	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_10	Environmental	Open in IMG/M
3300009665	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10	Environmental	Open in IMG/M
3300009762	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_40	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014152	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_60_metaG	Environmental	Open in IMG/M
3300014156	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_60_metaG	Environmental	Open in IMG/M
3300014160	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_30_metaG	Environmental	Open in IMG/M
3300014161	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_30_metaG	Environmental	Open in IMG/M
3300014162	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaG	Environmental	Open in IMG/M
3300014167	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_10_metaG	Environmental	Open in IMG/M
3300014168	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaG	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014201	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014491	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2D metaG	Environmental	Open in IMG/M
3300014492	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2M metaG	Environmental	Open in IMG/M
3300014493	Permafrost microbial communities from Stordalen Mire, Sweden - 712S2M metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300016750	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017934	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3	Environmental	Open in IMG/M
3300017940	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_100	Environmental	Open in IMG/M
3300017941	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_150	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300017988	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaG	Environmental	Open in IMG/M
3300018008	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_40	Environmental	Open in IMG/M
3300018033	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018035	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300018040	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300018044	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10	Environmental	Open in IMG/M
3300018046	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_10	Environmental	Open in IMG/M
3300018047	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10	Environmental	Open in IMG/M
3300018057	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300022524	Peat soil microbial communities from Stordalen Mire, Sweden - 717 E1 20-24	Environmental	Open in IMG/M
3300025612	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10 (SPAdes)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026294	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050 (SPAdes)	Environmental	Open in IMG/M
3300027604	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028773	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_2	Environmental	Open in IMG/M
3300029911	III_Bog_N2 coassembly	Environmental	Open in IMG/M
3300029939	I_Bog_E3 coassembly	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030053	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_2	Environmental	Open in IMG/M
3300030617	II_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030618	II_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031524	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_3	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033887	Peat soil microbial communities from Stordalen Mire, Sweden - 713 P-1-X1	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12649J13570_10109051	3300001175	Forest Soil	MRRRYWIALALVSSACSQPARSAASLLPASVGGVWQRKSLHGMTPPNPAVLRAFEAAYDGAGRVTVDLYETKVSGTAFEMTQHWRASPDTVFFDKGRYFVLVKWEQADRGALTAFVRGLQRELAE*
Ga0070731_105791792	3300005538	Surface Soil	MIRRNWIFAALASSACSHPPASGESLLPRQVGAWTRTSLHDVAPPQANVLRGFEAVYSGAGELTVDLYDTKASGVAFEMTQHWRPSADTVFFDKGTYFAVVKWEQADRAALREFVRALQKELEGQGR*
Ga0070761_1000284610	3300005591	Soil	MTRRYWIVFALLSIACSQPPRSAQSLLPASVGGVWHRKSLRPGQPPKSGVLRAFEADYEGAGNLTVDLYETKVSGTAFEMTQHWREAPNTVFFDKGRCFVVVKWEQADRQALTAFVRGLQKVLEE*
Ga0070764_104792681	3300005712	Soil	MTRRSWIAPALLWTACGRRARDAESLLPATVGGAWQREWLRGMAPPKPAVARAFEAGYEGAGRLTVDLYEGKASGTAFEMTQHWRAAPNTVFFDKGRYFVVVKWEQAERQALTEFVHGLQKGLEE*
Ga0070766_100503482	3300005921	Soil	MIRRSCIVLALALSSCGRPPRSAGNLLPASVAGAWQRTSLRDIPPPKPTITRAFEADYQGAGKLTVDLYEAKVSGTAFEMTQHLRSAPDTVFFDKDRYFVVMKWQQADRPALTAFVRAMQKNLEQ*
Ga0070766_103564773	3300005921	Soil	MILALAGSACGPPPRGAETLLPSRVAGVWQRQSLHAIPPPKATIQRAFEASYEGDGKLAVDLYEAKVSGTAFEMTQHWRAAPDTVVFDKGRYFVVVKWEQADRASLQGFVRALQKGLEE*
Ga0080026_102510491	3300005952	Permafrost Soil	LAACSPPPRAAGSLLPQSIGCVWQRKSLRGAPPSQPGVVRAFEAAYEVTGKLTVELYETKVSGTAFEMTQHWRAMPNTVFFDKGRYFAVVKWEAADRQTLTDFVRGLEKNLAE*
Ga0066790_100216944	3300005995	Soil	MLAACSPPPRAAGSLLPQSIGGVWQRKSLRGVPPSQPGVVRALEAVYEGTGKLIVELYETKVSGTAFEMTQHWRAMPNTVFFDKGRYFAVVKWEAADRQTLTDFVRGLEKNLAE*
Ga0075029_1005036672	3300006052	Watersheds	CSQPPRAAGSLLPASVGAVWQRKSLRDIPPPKPSVTRAFEAAYEGAGKVIVDLYETRVSGTAFEMTQRWRSTPDTVFFDKGRYFVLVKWERSDRKALTGFVRALQKGLEE*
Ga0075019_110898001	3300006086	Watersheds	MTRRYWILSALVWSACSQPPRAAGSLLPASVGAVWQRKSLRDIPPPKPSVTRAFEAAYEGAGKVTVDLYETRVSGTAFEMTQRWRSTPDTVFFDKGRYFVLVKWERSDRKALTGFVRALQKGLEE*
Ga0075015_1009360321	3300006102	Watersheds	LLPATVGGIWQRKSLRDTPPPKPGVLRAFEADYGGAGKLTVDLYETKVSGTAFEMTQHWRASADTVFFDKGRYFALVKREQADRKALTTFVRALQKELEE*
Ga0075030_1000561074	3300006162	Watersheds	MTRRYWILSALVWSACSQPPRAAGSLLPASVGAVWQRKSLRDIPPPKPSVTRAFEAAYEGAGKVIVDLYETRVSGTAFEMTQRWRSTPDTVFFDKGRYFVLVKWERSDRKALTGFVRALQKGLEE*
Ga0075030_1001024973	3300006162	Watersheds	MARRYWIAFAVVWSACSQPPRSAESLLPPSVGGIWQRRSLRDTPPPKPGVLRAFEAEYDGAGKLTVDLYETKVSGTAFEMTQHWRASADTVFFDKGRYFALVKREQADRKALTTFVRALQKELEE*
Ga0105245_105470971	3300009098	Miscanthus Rhizosphere	MMRRYWTMVALAACACSHTARTAESLLPETVNRAWQRKSLSPITPPQATVQRAFEATYEGAGKLVVDLYETKASAVAFEMTQRWKPAPDTVFFDKGVYFVVVKWEQADRQALTAFVRGLQDHLGREKP*
Ga0105248_132693982	3300009177	Switchgrass Rhizosphere	MMRRYWTMVALAACACSHTARTAESLLPETVNRAWQRKSLSPITPPQATVQRAFEATYEGAGKLVVDLYETKASAVAFEMTQRWKPAPDTVFFDKGVYFVVVKWEQADRQALTAFVRGLHDNLGREKP*
Ga0116218_11001783	3300009522	Peatlands Soil	VPRRHWIVLALVSTACSQPPRSADTLLPPSAGGVWQRKDPIREIPPPKATVARAFEADYEGAGKLTVDLYETKVSGTAFEMTQHWRASPDTVFFDKGRYFVVVKWRQADRQALTAFVRTLQKVFAE*
Ga0116133_10567132	3300009623	Peatland	MPRRYWIVLALACSACSQPPRSAETLLPASVGGVWQRKSLRDIATPRPAILRAFEAGYEGAGKAGKLTVTLYEANVSGTAFEMTQHWRAAPDTVVFDKGRCFVVMKWEQADRNALTAFVRALQKGLEE*
Ga0116125_11249492	3300009628	Peatland	MTRRHWIVLAIGLSACGQPPRDRERLLPASVAGWQRTALRDIKPPKPTILRAFEAGYERSGKLTIDLYEAKVSGTAFEMTQHWRSAPNTVVFDKGRCFVVVKWERADRQALTAFVRALQKNLEE*
Ga0116117_11689281	3300009635	Peatland	MTRRYWIVLAIVWAACSPPPRSAESLLPESIGGAWHRKSLGTIAPPKPTILRAFEATYEGAGKLAVDLYEAKVSGTAFEMTQHWRAAPDTVFFDKGRYFVVVKWERADRQALQAFVRDLQNELAE*
Ga0116113_11861802	3300009638	Peatland	MTRRHWIVLALGLSACGQPPRDRERLLPASVAGWQRTALRDIKPPKPTILRAFEAGYERSGKLTIDLYEAKVSGTAFEMTQHWRSAPNTVVFDKGRCFVVVKWERADRQALTAFVRALQKNLEE*
Ga0116135_10034695	3300009665	Peatland	MRRRYWIVLALVSSACSQPARSAASLLPASVGEVWQRKSLHAIPPPKPAILRAFEAGYEGAGQATVDLYEAKISGTAFEMTQHWRAAPNTVFFDKGRYFVLVKWEKADRQALTALVRGLQKELED*
Ga0116130_11888731	3300009762	Peatland	MPRRYWILLALACAACSQLARSAASLLPGTVGGVWQRKSLRDMPLPQPAIVRAFEAGYEGAGRLTVDLYETKVSGTAFEMTQHWRAAPDTVFFDKVRYFVVVKWEQADRQAITSFVRALQKELGE*
Ga0136449_10001405016	3300010379	Peatlands Soil	LQQNGRRNWIVVALVLSACSQPPRSADSLLPARVGAVWQRKSLRDMPPPKPTILRAFEATYEGAGNLTVDLYETKVSGTAFEMTQHWRAAPDTVFFDKGRHFVVVQWEQADRQALTAFVRGLQKELEE*
Ga0136449_1000761667	3300010379	Peatlands Soil	MTRRYWIVVALVLSACSQPSRGAASLLPASVGIWQRKSLRDMPTPKPSVMRALEAIYEGAGKLTVDLYETKVSGTAFEMTQHWRAAPDTVFFDKGRYFVLLKWEQADRQALTAFVRALQKELEE*
Ga0136449_1032251982	3300010379	Peatlands Soil	MTRRYWVFLALVLSACSQPARSAASLLPASLGGVWQRTSLRDIAPPRPGIVRAFEAGYEGAGKVTVDLYETKNAFEMVQHWREAPNTVFFYKGRYFVLVKWEQADRQALTAFVRGLQKELEE*
Ga0157378_106245882	3300013297	Miscanthus Rhizosphere	MMRRYWTMVALAACACSHTARTAESLLPETVNRAWQRKSLSPITPPQATVQRAFEATYEGAGKLVVDLYETKASAVAFEMTQRWKPAPDTVFFDKGVYFVVVKWEQADRQALTAFVRGLQDNLGREKP*
Ga0181533_10479675	3300014152	Bog	MTRRYWIVLALVWSACSQPPRSAETLLPASIEVWQRKSLRDIPPPKPTILRAFEAGYEGAGKLTVDLYEAKVSGTAFEMTQHWRESPNTVFFDKGRYFVVVKWEQADRQALTAFVRALQKELAE*
Ga0181518_1000186618	3300014156	Bog	MTRRYWIVLALVWSACSQPPRSAETLLPASIGGVWQRKSLRDIPPPKPTILRAFEAGYEGAGKLTVDLYEAKVSGTAFEMTQHWRESPNTVFFDKGRYFVVVKWEQADRQALTAFVRALQKELAE*
Ga0181518_101130441	3300014156	Bog	MTRRYWIALALVGSACSQPPRSAETLLPASAGGVWQRKSLRGIAPPKPAILRAFEAGYEGDGKPAGKLTVTLYEAKVSGTAFEMTQHWRAAPNTVVFDKGRCFVVVKWEQADRKALTAFVRALQKNLEE*
Ga0181517_103703012	3300014160	Bog	MARRYWIALALVGSACSQPPRSAETLLPASVGGVWQRKSLRDIATPRPAILRAFEAGYEGVRKAGKLTVDLYKAKVSGTAFEMTQHWRAAPDTVVFDKGRCFVVMKWEQADRNALTAFVRALQKGLEE*
Ga0181529_102501511	3300014161	Bog	RYWIALALVGSACSQPPRSAETLLPASAGGVWQRKSLRGIAPPKPAILRAFEAGYEGDGKPAGKLTVTLYEAKVSGTAFEMTQHWRAAPNTVVFDKGRCFVVVKWEQADRKALTAFVRALQKNLEE*
Ga0181538_100651614	3300014162	Bog	MTRRYWIVLALVWSACSQSPRSAETLLPASIGGVWQRKSLRDIPPPKPTILRAFEAGYEGAGKLTVDLYEAKVSGTAFEMTQHWRESPNTVFFDKGRYFVVVKWEQADRQALTAFVRALQKELAE*
Ga0181528_100676801	3300014167	Bog	LLPASAGGVWQRKSLRGIAPPKPAILRAFEAGYEGDGKPAGKLTVTLYEAKVSGTAFEMTQHWRAAPNTVVFDKGRCFVVVKWEQADRKALTAFVRALQKNLEE*
Ga0181534_1000258912	3300014168	Bog	MTRRYWIIPALAWSACSPPPRAAEALLPSSVAGTWQRQSLRAISPPKPTIERAFEATYEGAGKLTVDLYEAKVSGTAFEMTQHWRAAPDTVFFDKGRCFVVMKWEQADRRALQAFVRALQKGLEE*
Ga0181526_103543172	3300014200	Bog	MPRRYWILPALVLSACSQPARSAASLLPAGVGGIWQRKSLRDITPPRPGIVRAFEAVYEGGGKVTVDLYETKVSGTAFEMTQHWRATADTVFFDKGRYFVLVKWEQADRPALTLFVRGIQQELGE*
Ga0181526_109364321	3300014200	Bog	MARRYWIALALVGSACSQPPRSAETLLPASVGGVWQRKSLRDIATPRPAILRAFEAGYEGVRKAGKLTVDLYKAKVSGTAFEMTQHWRAAPDTVVFDKGRCFVVMKWEQADRNALTAFV
Ga0181537_103886463	3300014201	Bog	MTRRYWIIPALAWSACSPPPRAAEALLPSSVAGTWQRQSLRAISPPKPTIERAFEATYEGAGKLTVDLYEAKVSGTAFEMTQHWRAAPDTVFFDKGRCFVVMKWEQADRRALQAFVRALQKGLAE*
Ga0182018_100089954	3300014489	Palsa	MTRRYWTVCALVWSACSQPPRGAESLLPASLGGAWQRKSLRDIAPPKPSVVRAFEADYEGAGRVTVDLYEAKVSGTAFEMTQHWRASADTVFFDKGRYFVVVKWERADRQALTAFVRGLQKELEE*
Ga0182018_100479792	3300014489	Palsa	MTRRYWIVLALVLSACSQPPRTAATLLPASVSGVWQRKSLHGIPPPKPTILRAFEADYEGAGKVTIDLYEAQGSGTAFEMTQHWRAVPNTVFFDKGRYFVVVKWVQADRKALTAFVRGMQKVLEE*
Ga0182018_103175203	3300014489	Palsa	MTRRFWVVPALISSACGQPARSAANLLPASVGGVWQRKSLHDIPPPKTTILRAFEADYEGAGKVTVDLYDAQLSGTAFEMTQHWRAAPNTVFFDKGRYFVVVKWE
Ga0182014_100479513	3300014491	Bog	MLPASVGGVWQRKSLRGIAPPKPAILRAFEAGYEGDGKPAGKLTVTLYEAKVSGTAFEMTQHWRAAPNTVVFDKGRCFVAMKWEQADRKALTAFVRALQKGLEE*
Ga0182013_100771182	3300014492	Bog	MNTSNYSFLRRITLRCWLVLALAASACTQPPRGAERLLPSRVGGVWQRKSIRAIAPPRPGIVRAFEAAYEGAGQLTVELYETKVSGTAFEMTQHWRSSPDAVFFDKGRYFVLVKWERADRNALTAFVRALQKLLEE*
Ga0182013_101092653	3300014492	Bog	MARRYWIALALVGSACSQPPRSAETLLPASVGGVWQRKSLRDIATPRPAILRAFEAGYEGVGKAGKLTVDLYEAKVSGTAFEMTQHWRAAPDTVVFDKGRCFVVMKWEQADRNALTAFVRALQKGLEE*
Ga0182016_100295265	3300014493	Bog	MARRYWIALALVGSACSQPPRSAETLLPASVGGVWQRKSLRDIATPKPAILRAFEAGYEGAGKAGKLTVNLYEAKVSGTALEMTQHWRAAPDTVVFDKGRCFVVMKWEQADRNALTAFVRALQKGLEE*
Ga0182015_100104795	3300014495	Palsa	MTRRFWVVPALISSACGQPARSAANLLPASVGGVWQRKSLHDIPPPKTTILRAFEADYEGAGKVTVDLYDAQLSGTAFEMTQHWRAAPNTVFFDKGRYFVVVKWEHADRQALTAFVRGLQKELGDLEH*
Ga0182024_118893552	3300014501	Permafrost	MTRRYLIVLALAGSACGHPARGGASLLPAGMGGVWQRESLHVIPPLNSGIARGFEAVYRGAGKLTVELYETKAPGTAFEMVQHWRAAPNTVVFDKGRYFVRVEWEQADRQALTAFVRALQKVLDE*
Ga0181522_100966981	3300014657	Bog	MARSYWIALALVGSACSQPPRSAETLLPASVGGVWQRKSLRDIATPRPAILRAFEAGYEGVRKAGKLTVDLYKAKVSGTAFEMTQHWRAAPDTVVFDKGRCFVVMKWEQADRNALTAFVRALQKGLEE*
Ga0181505_110274051	3300016750	Peatland	MTRRHWIVLALGLSACGQPPRDRERLLPASVAGWQRTALRDIKPPKPTILRAFEAGYERSGKLTIDLYEAKVSGTAFEMTQHWRSAPNTVVFDKGRCFVVVKWERADRQALT
Ga0187803_101025093	3300017934	Freshwater Sediment	MCSMTRRYWIVLALVWSACSQPARSAASLLPASVGGVWQRKSLRDTPPPKPGVVRAFEAAYEGGGKLTVDLYETKVSGTAFEMVQRWRAAPDTVVFDKGRYFVLVRWEQADRKALTAFVRGLQKELEE
Ga0187853_104677991	3300017940	Peatland	MTHRHWIVFALLFSACSPPPRTAESLLPASVGGAWQRTSLRNVPPSKPTVLRVFEADYQGAGDLTVDLYDTKVSGTAFEMTQHWRESPNTVFFDKGKYFVVVKWGKADRQALTAFVRALQKNLDK
Ga0187850_102115181	3300017941	Peatland	VQEMTRRYWIALALVGSACSQPPRSAETLLPASAGGVWQRKSLRGIAPPKPAILRAFEAGYEGDGKPAGKLTVTLYEAKVSGTAFEMTQHWRAAPNTVVFDKGRCFVVVKWEQADRKALTAFVRALQKNLEE
Ga0187879_100752861	3300017946	Peatland	MARRYWIALALVGSACSQPPRSAETLLPASVGGVWQRKSLRDIATPKPAILRAFEAGYEGAGKAGKLTVNLYEARVSGTALEMTQHWRAAPDTVVFDKGRCFVVMKWEQADRNALTAFVRALQKGLEE
Ga0187879_100776163	3300017946	Peatland	MTRRHWIVLALGLSACGQPPRDRERLLPASVAGWQRTELRDIKPPKPTILRAFEAGYERSGKLTIDLYEAKVSGTAFEMTQHWRSAPNTVVFDKGRCFVVVKWERADRQALTAFVRALQKNLEE
Ga0187879_102069072	3300017946	Peatland	MPRRYWILLALVCAACSQPARSAASLLPDTVGGVWQRKSLRDMPPPQPGVLRAFEAGYEGAGRLTVDLYETKVSGTAFEMTQHWRAAPDTVFFDKGRYFVLVKWEQADRQALQAFVRALQ
Ga0187847_1000187613	3300017948	Peatland	MTRRHWIVLALGLSACGQPPRDRERLLPASVAGWQRTALRDIKPPKPTILRSFEAGYERSGKLTIDLYEAKVSGTAFEMTQHWRSAPNTVVFDKGRCFVVVKWERADRQALTAFVRALQKNLEE
Ga0187847_100391433	3300017948	Peatland	MKRRYWIVAALVWSACGQPARSARSLLPGSVGGTWQRKSLRDLPPPKAGVVRAFEAGYEGSGKLTVDLYETKASGTAFEMTQHWRASADTVFFDKGRYFVVVKWEQADRQALTAFVRGLQKELEE
Ga0187847_101258572	3300017948	Peatland	MARRYWIALALVGSACSQPPRSAETLLPASVGGVWQRKSLRDIATPRPAILRAFEAGYEGAGKAGKLTVTLYEANVSGTAFEMTQHWRAAPDTVVFDKGRCFVVMKWEQADRNALTAFVRALQKGLEE
Ga0181520_100452946	3300017988	Bog	MTRRYWIALALVGSACSQPPRSAETLLPASAGGVWQRKSLRGIAPPKPAILRAFEAGYEGDGKPAGKLTVTLYEAKVSGTAFEMTQHWRAAPNTVVFDKGRCFVVVKWEQADRKALTAFVRALQKNLEE
Ga0181520_110709021	3300017988	Bog	LPASVGGVWQRKSLRDIATPRPAILRAFEAGYEGVRKAGKLTVDLYKAKVSGTAFEMTQHWRAAPDTVVFDKGRCFVVMKWEQADRNALTAFVRALQKGLEE
Ga0187888_12998382	3300018008	Peatland	MTRRHWIVLALGLSACGQPPRDRERLLPASVAGWQRTALRDIKPPKPTILRAFEAGYERSGKLTIDLYEAKVSGTAFEMTQHWRSAPNTVVFDKGRCFVVVKWERADRQALTAFVRALQKNLEE
Ga0187867_100237406	3300018033	Peatland	MARRYWIALALVGSACSQPPRSAETLLPASVGGVWQRKSLRDIATPRPAILRAFEAGYEGVRKAGKLTVDLYKAKVSGTAFEMTQHWRAAPDTVVFDKGRCFVVMKWEQADRNALTAFVRALQKGLEE
Ga0187867_100834031	3300018033	Peatland	MPRRYWILLALACAACSQLARSAASLLPGTVGGVWQRKSLRDMPLPQPAIVRAFEAGYEGAGRLTVDLYETKVSGTAFEMTQHWRAAPETVFFDKGRYFVVVKWEQADRQALTAF
Ga0187863_107572252	3300018034	Peatland	MTRRYWIVPALVWSACSQPPRSVETRLPASVGGVWQRKSLRDIAPPKPTILRAFEASYEGAGKLTVELYEAKVSGTAFEMTQHWRAAPNAVAFDKGRCFVVVKWEQADRKALTAFVRGLQKALEE
Ga0187875_100264028	3300018035	Peatland	MTHRHWIVFALLFSACSPPPRTADSLLPASVGGAWQRTSLRDLPPPKPTVLRVFEADYQGAGNLTVDLYEAKVSGTAFEMTQHWRESPNTVFFDKGKYFVVVKWKQADRQPLTAFVRAMQKNLEK
Ga0187875_100998251	3300018035	Peatland	ACSQPPRSAETLLPASVGGVWQRKSLRDIATPKPAILRAFEAGYEGAGKAGKLTVNLYEARVSGTALEMTQHWRAAPDTVVFDKGRCFVVMKWEQADRNALTAFVRALQKGLEE
Ga0187875_101345633	3300018035	Peatland	MTHRHWIVFALLFSACSPPPRTAESLLPASVGGAWQRTSLRNVPPPKPTVLRVFEADYQGAGDLTVDLYDTKVSGTAFEMTQHWRESPNTVFFDKGKYFVVVKWGKADRQALTAFVRALQKNLDK
Ga0187875_102854472	3300018035	Peatland	MPRRYWILLALACAACSQLARSAASLLPGTVGGVWQRKSLRDMPLPQPAIVRAFEAGYEGAGRLTVDLYETKVSGTAFEMTQHWRAAPETVFFDKGRYFVVVKWEQADRQALTAFVRALQKELGE
Ga0187855_100118551	3300018038	Peatland	MARRYWIALALVGSACSQPPRSAETLLPASVGGVWQRKSLRDIATPRPAILRAFEAGYEGAGKAGKLTVTLYEANVSGTAFEMTQHWRAAPDTVVFDKGRCFVVMKWEQADRN
Ga0187855_100186741	3300018038	Peatland	MTRRHWIVLALGLSACGQPPRDRERLLPASVAGWQRTALRDIKPPKPTILRAFEAGYERSGKLTIDLYEAKVSGTAFEMTQHWRSAPNTVVFDKGRCSVVVKWKRADRQALTAFVRALQKNLAEWVERGINIMPASQPI
Ga0187855_102570312	3300018038	Peatland	MCKNLYKMPRRYWIALALVCAACSQPARSAASLLPDTVGGVWQRKSLRDMPPPQPAIVRAFEAGYEGAGKLTVDLYETKVSGTAFEMTQHWRASADTVFFDKGRYFVLVKWEQADRQALQAFVRALQKELGE
Ga0187862_100374943	3300018040	Peatland	MTRRHWIGLALGLSACGQPPRDRERLLPASVAGWQRTALRDIKPPKPTILRAFEAGYERSGKLTIDLYEAKVSGTAFEMTQHWRSAPNTVVFDKGRCFVVVKWERADRQALTAFVRALQKNLEE
Ga0187871_102559041	3300018042	Peatland	MPRRYWILLALVCAACSQPARSAASLLPDTVGGVWQRKSLRDMPPPQPGVLRAFEAGYEGAGRLTVDLYETKVSGTAFEMTQHWRAAPDTVFFDKGRYFVVVKWEQADRQAITSFVRALQKELGE
Ga0187871_104124641	3300018042	Peatland	IALALVGSACSQPPRSAETLLPASVGGVWQRKSLRDIATPKPAILRAFEAGYEGAGKAGKLTVNLYEARVSGTALEMTQHWRAAPDTVVFDKGRCFVVMKWEQADRNALTAFVRALQKGLEE
Ga0187887_104628592	3300018043	Peatland	RLKGGCGKDWPPSKAIWIFPALVLSACSQPARSAANLLPASVGGVWQRKSLRDIAPPRPGVVRAFEAGYEGGGKVTVDLYETKVSGTAFEMTQHWRASGDSVFFDKGRYFVLVKWEQADRQALTAFVRGLQKQLEE
Ga0187890_105323541	3300018044	Peatland	MPRRYWILLALACAACSQLARSAASLLPGTVGGVWQRKSLRDMPLPQPAIVRAFEAGYEGAGRLTVDLYETKVSGTAFEMTQHWRAAPETVFFDKGRYFVVVKWEQADRQALTAFVRALQKALEE
Ga0187890_105540692	3300018044	Peatland	SACGQPPRDRERLLPASVAGWQRTALRDIKPPKPTILRAFEAGYERSGKLTIDLYEAKVSGTAFEMTQHWRSAPNTVVFDKGRCFVVVKWERADRQALTAFVRALQKNLEE
Ga0187851_1000443410	3300018046	Peatland	MTRRHWIVLALGLSACGQPPRDRERLLPASVAGWQRTALRDIKPPKPTILRAFEAGYERSGKLTIDLYEAKVSGTAFEMTQHWRSAPNTVVFDKGRCFVVVKWERADRQALTAF
Ga0187859_102641661	3300018047	Peatland	LCQNVYQMTRRYWIIPALAWSACSPPPRAAEALLPSSVAGTWQRQSLRAISPPKPTIERAFEATYEGAGKLTVDLYEAKVSGTAFEMTQHWRAAPDTVFFDKGRCFVVMKWEQADRRALQAFVRALQKGLEE
Ga0187858_104650171	3300018057	Peatland	LLPASVGGVWQRKSLRDIATPKPAILRAFEAGYEGAGKAGKLTVNLYEARVSGTALEMTQHWRAAPDTVVFDKGRCFVVMKWEQADRNALTAFVRALQKGLEE
Ga0187769_107209291	3300018086	Tropical Peatland	MNRRYWMVLALVSGACSRPAPSSATLLPSSVGIWQRTSLRDVAPLRPTVVRAFEAGYDGAGQLTVDLYETKISGTAFEMTQHWRAAPDSVFFDKGRYFVLIKWQHADRQALTAFVRAMEKELGDLER
Ga0187770_104701851	3300018090	Tropical Peatland	MTRRYWIVLALVWSACSQPARSGASLLPASLGGVWQRKSLRDIPPPKPAVVRAFEGAYEGAGKLTVDLYETKVSGAAFEMVQRWRAAPDTVCFDKGRYFVLVKWEQADRKALTAFVRALQKELGE
Ga0210386_109183212	3300021406	Soil	MIRRSCIVLALALSSCGRPPRSAGNLLPASVAGAWQRTSLRDIPPPKPTITRAFEADYQGAGKLTVDLYEAKVSGTAFEMTQHLRSAPDTVFFDKDRYFVVMKWQQADRPAL
Ga0224534_10040866	3300022524	Soil	MLPASVGGVWQRKSLRGIAPPKPAILRAFEAGYEGDGKPAGKLTVTLYEAKVSGTAFEMTQHWRAAPNTVVFDKGRCFVAMKWEQADRKALTAFVRALQKGLEE
Ga0208691_10038433	3300025612	Peatland	MRRRYWIVLALVSSACSQPARSAASLLPASVGEVWQRKSLHAIPPPKPAILRAFEAGYEGAGQATVDLYEAKISGTAFEMTQHWRAAPNTVFFDKGRYFVLVKWEKADRQALTALVRGLQKELED
Ga0207687_104375242	3300025927	Miscanthus Rhizosphere	MVALAACACSHTARTAESLLPETVNRAWQRKSLSPITPPQATVQRAFEATYEGAGKLVVDLYETKASAVAFEMTQRWKPAPDTVFFDKGVYFVVVKWEQADRQALTAFVRGLQDHLGREK
Ga0209839_100210124	3300026294	Soil	MLAACSPPPRAAGSLLPQSIGGVWQRKSLRGVPPSQPGVVRAFEAAYEGTGKLTVELYETKVSGTAFEMTQHWRAMPNTVFFDKGRYFAVVKWEAADRQTLTDFVRGLEKNLAE
Ga0208324_10756393	3300027604	Peatlands Soil	VPRRHWIVLALVSTACSQPPRSADTLLPPSAGGVWQRKDPIREIPPPKATVARAFEADYEGAGKLTVDLYETKVSGTAFEMTQHWRASPDTVFFDKGRYFVVVKWRQADRQALTAFVRTLQKVFAE
Ga0209274_100051834	3300027853	Soil	MTRRYWIVFALLSIACSQPPRSAQSLLPASVGGVWHRKSLRPGQPPKSGVLRAFEADYEGAGNLTVDLYETKVSGTAFEMTQHWREAPNTVFFDKGRCFVVVKWEQADRQALTAFVRGLQKVLEE
Ga0209579_106176792	3300027869	Surface Soil	MIRRNWIFAALASSACSHPPASGESLLPRQVGAWTRTSLHDVAPPQANVLRGFEAVYSGAGELTVDLYDTKASGVAFEMTQHWRPSADTVFFDKGTYFAVVKWEQADRAALREFVRALQKELEG
Ga0209698_100050361	3300027911	Watersheds	MARRYWIAFAVVWSACSQPPRSAESLLPPSVGGIWQRRSLRDTPPPKPGVLRAFEAEYDGAGKLTVDLYETKVSGTAFEMTQHWRASADTVFFDKGRYFALVKREQADRKALTTFVRALQKELEE
Ga0209698_100948273	3300027911	Watersheds	MTRRYWILSALVWSACSQPPRAAGSLLPASVGAVWQRKSLRDIPPPKPSVTRAFEAAYEGAGKVIVDLYETRVSGTAFEMTQRWRSTPDTVFFDKGRYFVLVKWERSDRKALTGFVRALQKGLEE
Ga0302234_101946771	3300028773	Palsa	MTRRYWIVLALVLSACSQPPRTAATLLPASVSGVWQRKSLHGIPPPKPTILRAFEADYEGAGKVTIDLYEAQGSGTAFEMTQHWRAVPNTVFFDKGRYFVVVKWVQADRKALTAFVRGMQKVLEE
Ga0311361_102537643	3300029911	Bog	MLLLLAACTQPPRASASLLPPVVAAWQRKSLRGLPPPKVTIARSFEAFYEGAGKLTVDLYEAKVSGAAFEMTQHWRATPDTVFFDKGVYFVVVKWEQADREALKAFVRALERNLEQ
Ga0311328_106041461	3300029939	Bog	MLLLLAACTQPPRASASLLPPVVAAWQRKSLRGLPPPKVTIARSFEAFYEGAGKLTVDLYEAKVSGAAFEMTQHWRATPDTVFFDKGVYFVVVKWEQADREALKAFVRALERNLE
Ga0311340_101012244	3300029943	Palsa	MTRRFWVVPALISSACGQPARSAANLLPASVGGVWQRKSLHDIPPPKTTILRAFEADYEGAGKVTVDLYDAQLSGTAFEMTQHWRAAPNTVFFDKGRYFVVVKWEHADRQALTAFVRGLQKELGDLEH
Ga0311371_101899766	3300029951	Palsa	MKRRYWIVAALVWSACGQPARSARSLLPGSVGGTWQRKSLRDLPPPKAGVVRAFEAGYEGSGKLTVDLYETKASGTAFEMTQHWRASADTVFFDKGRYFVGVKWEQADRQALTAFVRGLQ
Ga0311371_112894632	3300029951	Palsa	MTRRYWIVFALVCSACNQPPRADESLLPAGLSGGWKRQSLRQIPPPKPTILRAFEASYTGAGTGKVTIDLYEARVSGTAFEMTQHWRSAPNTVVFDKGRYFVVLKWQQADRWALTAFVRVLQKNLEE
Ga0311339_110236351	3300029999	Palsa	MTRRYWTVCALVWSACSQPPRGAESLLPASLGGAWQRKSLRDIAPPKPSVVRAFEADYEGAGRVTVDLYEAKVSGTAFEMTQHWRASADTVFFDKGRYFVVVKWERADRQALTAFVRGLQKELEE
Ga0311338_107383822	3300030007	Palsa	MRRNCIVLAIALTACSRPPRSAASLLPASVAGGWQRTSLRDVPPPKRTILRAFEAEYEGAGKLTVDLYEAKVSGTAFEMMQHWRSAPNTVFFDKDRYFVVMKWQQADRPALTAFVRAMQKNLAVLVGRASTPAAGLQARLFPNNLR
Ga0302177_102025843	3300030053	Palsa	MCCMKRRYWIVAALVWSACGQPARSARSLLPGSVGGTWQRKSLRDLPPPKAGVVRAFEAGYEGSGKLTVDLYETKASGTAFEMTQHWRASADTVFFDKGRYFVVVKWEQADRQALTAFV
Ga0311356_117550052	3300030617	Palsa	RADESLLPAGLSGGWKRQSLRQIPPPKPTILRAFEASYTGAGTGKVTIDLYEARVSGTAFEMTQHWRSAPNTVVFDKGRYFVVLKWQQADRWALTAFVRVLQKNLEE
Ga0311354_101663212	3300030618	Palsa	MCCMKRRYWIVAALVWSACGQPARSARSLLPGSVGGTWQRKSLRDLPPPKAGVVRAFEAGYEGSGKLTVDLYETKASGTAFEMTQHWRASADTVFFDKGRYFVVVKWEQADRQALTAFVRGLQKELEE
Ga0311354_115180641	3300030618	Palsa	AIALTACSRPPRSAASLLPASVAGGWQRTSLRDVPPPKRTILRAFEAEYEGAGKLTVDLYEAKVSGTAFEMMQHWRSAPNTVFFDKDRYFVVMKWQQADRPALTAFVRAMQKNLAVLVGRASTPAAGLQARLFPNNLR
Ga0302325_102637175	3300031234	Palsa	MCQNPYQMPRRHWIVLALLCSACGQAPRDPQSLLPASVSGGWQRKSLRGIPPPKPTIPRAFEADYEGAGKLTVDLYEAKVSGTAFEMTQHWRSAPNTVVFDKGRYFVVAKW
Ga0302325_109756601	3300031234	Palsa	MPRRHWILLALILTACSASPRNAASLLPASVGGIWQRKALRDVPPPKPTILRAFEADYEGAGKLTVDLYETKVSGTAFEMTQHWKALPDTVFFDKGRYFVVVKWQQADRQALTAFVRALQKGLEE
Ga0302324_1011504431	3300031236	Palsa	MCQNPYQMPRRHWIVLALLCSACGQAPRDPQSLLPASVSGGWQRKSLRGIPPPKPTIPRAFEADYEGAGKLTVDLYEAKVSGTAFEMTQHWRSAPNTVVFDKGRYFVVAKWEQADRWALTAFVRALQKNLEE
Ga0302320_103600941	3300031524	Bog	MLLLLAACTQPPRASASLLPPVVAAWQRKSLRGLPPPKVTIARSFEAFYEGAGKLTVDLYEAKVSGAAFEMTQHWRATPDTVFFDKGVYFVVVKWEQADRE
Ga0302320_117668401	3300031524	Bog	WIVAALVWSACGQPARSARSLLPGSVGGTWQRKSLRDLPPPKAGVVRAFEAGYEGSGKLTVDLYETKASGTAFEMTQHWRASADTVFFDKGRYFVVVKWEQADRQALTAFVRGLQKELEE
Ga0302326_110005461	3300031525	Palsa	MIRRSCIVLALVLSACSRPPRSTASLLPATVAGAWQRTSLRGIPPPKPTILRAFEADYQGAGKLTVDLYEAKVSGTAFEMTQHWRSAPDTVFFDKDRYFVVMKWQQADRPALTAFARAMQKNLEE
Ga0302326_124498592	3300031525	Palsa	MLVCSACSQPARSGESLLPSALGGVWQRKSLRAIPPPKPTVPRAFRAVYEGAGKLTVDLYEAQASGTAFEMSQHWRSSPDTVVFDKGRYFVEVKWEHADRQALMAFVRALQKQLEE
Ga0311301_100907942	3300032160	Peatlands Soil	MTRRYWIVVALVLSACSQPSRGAASLLPASVGIWQRKSLRDMPTPKPSVMRALEAIYEGAGKLTVDLYETKVSGTAFEMTQHWRAAPDTVFFDKGRYFVLLKWEQADRQALTAFVRALQKELEE
Ga0335078_100273909	3300032805	Soil	MRCRIWLVAAIAWCGCGPPPRSADSLLPASVGVWQRTSIRGLPPPKPAILRVFEAGYQGGGRLTVDLYEAKISGTAFEMAQHWREAPNTVFFDKGRYFAVVRWEQADRQALTAFVRALQKDLGQP
Ga0335078_100319024	3300032805	Soil	MRAAYARMFSMTRRYGIVLTLVLSACSQPARSAASLLPASLGGVWQRKSLRDIPPPRPGITRAFEAGYEGAGKVTVDLYETKNAFEMVQHWREAPNTVFFYKGRYFVLVKWEQADRQALTALVRGLQKELEE
Ga0335078_104688401	3300032805	Soil	MALAVLSCACSRRPRAAEVLLPQTISRIWTRVGRIRDVPPPQPNVARLLEAGYEGAGKVTVDLYETKASGTAFEMTQHWRAAPNTVFFDKGRYFVVVKWEQADRNALTAFVRALQKELGDLEK
Ga0335080_103127242	3300032828	Soil	MTSACSRPPRAAETLLPASLAGVWQRTSLRGIAPPNAAILRAFEAGYQGAGKLTVDLYEARASGTAFEMTQHWRESPNTVFFDQGRRFAVVKWDEADRQALTAFVRALEKQLKD
Ga0335081_106428681	3300032892	Soil	AAEVLLPQTISRIWTRVGRIRDVPPPQPNVARLLEAGYEGAGKVTVDLYETKASGTAFEMTQHWRAAPNTVFFDKGRYFVVVKWEQADRNALTAFVRALQKELGDLEK
Ga0335074_100074466	3300032895	Soil	MTRRSWIIPALLETACNQPERNAADLLPENVDGVWQRQGLRDLTPPNDTIARAFEAEYGGPGQLTVDLYEAKSSGTAFEMTQHWRASADSVFFDKGRYFVVVRWKQADRAALTRFVGTLQKQLGALEK
Ga0335077_118146031	3300033158	Soil	MTRRCWIVLAVLSCACSRRPRAAEVLLPQTISRIWTRVGRIRDVPPPQPNVARLLEAGYEGAGKVTVDLYETKASGTAFEMTQHWRAAPNTVFFDKGRYFVVVKWEQADRNALTAFVRALQKELGDLEK
Ga0334790_074724_324_701	3300033887	Soil	MTRRYLIVLALAGSACGHPARGGASLLPAGMGGVWQRESLHVIPPLNSGIARGFEAVYRGAGKLTVELYETKAPGTAFEMVQHWRAAPNTVVFDKGRYFVRVEWEQADRQALTAFVRALQKVLDE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F074322

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences