Metagenome Family F074265

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F074265
Family Type	Metagenome
Number of Sequences	119
Average Sequence Length	74 residues
Representative Sequence	VHRQHLTPWIIGTVLVCAALGAWYGHHIGDGGSGNIALISATCAVLGSFLPGAATRIWARLRGRGRPRQGAA
Number of Associated Samples	62
Number of Associated Scaffolds	119

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	80.34 %
% of genes near scaffold ends (potentially truncated)	16.81 %
% of genes from short scaffolds (< 2000 bps)	57.98 %
Associated GOLD sequencing projects	60
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.34

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (68.908 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil (27.731 % of family members)
Environment Ontology (ENVO)	Unclassified (28.571 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.420 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 53.00% β-sheet: 0.00% Coil/Unstructured: 47.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.34
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.34
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 119 Family Scaffolds
PF01244	Peptidase_M19	27.73
PF02694	UPF0060	10.08
PF13302	Acetyltransf_3	6.72
PF01966	HD	5.04
PF04248	NTP_transf_9	4.20
PF02541	Ppx-GppA	4.20
PF07690	MFS_1	3.36
PF14417	MEDS	1.68
PF00696	AA_kinase	1.68
PF00459	Inositol_P	1.68
PF00528	BPD_transp_1	1.68
PF08240	ADH_N	1.68
PF13091	PLDc_2	0.84
PF00581	Rhodanese	0.84
PF00583	Acetyltransf_1	0.84
PF05977	MFS_3	0.84
PF13472	Lipase_GDSL_2	0.84
PF13490	zf-HC2	0.84
PF01833	TIG	0.84
PF13358	DDE_3	0.84
PF00768	Peptidase_S11	0.84
PF12172	DUF35_N	0.84
PF00132	Hexapep	0.84
PF00326	Peptidase_S9	0.84
PF00381	PTS-HPr	0.84
PF00561	Abhydrolase_1	0.84

COG ID	Name	Functional Category	% Frequency in 119 Family Scaffolds
COG2355	Zn-dependent dipeptidase, microsomal dipeptidase homolog	Posttranslational modification, protein turnover, chaperones [O]	27.73
COG1742	Uncharacterized inner membrane protein YnfA, drug/metabolite transporter superfamily	General function prediction only [R]	10.08
COG0248	Exopolyphosphatase/pppGpp-phosphohydrolase	Signal transduction mechanisms [T]	8.40
COG2343	Uncharacterized conserved protein, DUF427 family	Function unknown [S]	4.20
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.84
COG1925	HPr or related phosphotransfer protein	Signal transduction mechanisms [T]	0.84
COG2814	Predicted arabinose efflux permease AraJ, MFS family	Carbohydrate transport and metabolism [G]	0.84

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	68.91 %
Unclassified	root	N/A	31.09 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	68.91 %
Unclassified	root	N/A	31.09 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	68.91 %
Unclassified	root	N/A	31.09 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	53.78 %
Unclassified	root	N/A	31.09 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.84 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	53.78 %
Unclassified	root	N/A	31.09 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.84 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	33.61 %
Unclassified	root	N/A	31.09 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.09 %
Catenulisporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales	1.68 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1.68 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.84 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.84 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.09 %
Catenulisporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Catenulisporaceae	1.68 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1.68 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.84 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.84 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.09 %
Catenulispora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Catenulisporaceae → Catenulispora	1.68 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1.68 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.84 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.84 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.09 %
Catenulispora pinisilvae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Catenulisporaceae → Catenulispora → Catenulispora pinisilvae	1.68 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1.68 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.84 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.84 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.84 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002917\|JGI25616J43925_10276822	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	627	Open in IMG/M
3300004092\|Ga0062389_100135976	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2278	Open in IMG/M
3300004152\|Ga0062386_100031431	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3942	Open in IMG/M
3300004635\|Ga0062388_101609378	Not Available	660	Open in IMG/M
3300005332\|Ga0066388_100575989	All Organisms → cellular organisms → Bacteria	1752	Open in IMG/M
3300005610\|Ga0070763_10322210	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	854	Open in IMG/M
3300005610\|Ga0070763_10675475	Not Available	603	Open in IMG/M
3300005712\|Ga0070764_10212467	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1089	Open in IMG/M
3300005921\|Ga0070766_10046424	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2426	Open in IMG/M
3300009792\|Ga0126374_10370134	Not Available	990	Open in IMG/M
3300010048\|Ga0126373_10000694	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	22730	Open in IMG/M
3300010048\|Ga0126373_10001344	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	17403	Open in IMG/M
3300010048\|Ga0126373_10372082	All Organisms → cellular organisms → Bacteria	1447	Open in IMG/M
3300010048\|Ga0126373_10625472	All Organisms → cellular organisms → Bacteria	1131	Open in IMG/M
3300010361\|Ga0126378_10050996	Not Available	3856	Open in IMG/M
3300010361\|Ga0126378_11064518	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	911	Open in IMG/M
3300010376\|Ga0126381_100023323	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	7290	Open in IMG/M
3300010376\|Ga0126381_100080023	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4107	Open in IMG/M
3300010376\|Ga0126381_100103021	All Organisms → cellular organisms → Bacteria	3649	Open in IMG/M
3300010376\|Ga0126381_100334805	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Catenulisporaceae → Catenulispora → Catenulispora pinisilvae	2086	Open in IMG/M
3300010376\|Ga0126381_103531172	Not Available	614	Open in IMG/M
3300010379\|Ga0136449_100039828	All Organisms → cellular organisms → Bacteria	10972	Open in IMG/M
3300010379\|Ga0136449_104124705	Not Available	540	Open in IMG/M
3300012202\|Ga0137363_10017238	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4773	Open in IMG/M
3300017926\|Ga0187807_1004758	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4159	Open in IMG/M
3300017926\|Ga0187807_1136678	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	780	Open in IMG/M
3300017928\|Ga0187806_1024444	All Organisms → cellular organisms → Bacteria	1766	Open in IMG/M
3300017933\|Ga0187801_10158375	Not Available	884	Open in IMG/M
3300017942\|Ga0187808_10008390	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	3983	Open in IMG/M
3300017942\|Ga0187808_10023087	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2532	Open in IMG/M
3300017942\|Ga0187808_10127567	Not Available	1114	Open in IMG/M
3300017942\|Ga0187808_10463948	Not Available	584	Open in IMG/M
3300017942\|Ga0187808_10470663	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Catenulisporaceae → Catenulispora → Catenulispora pinisilvae	580	Open in IMG/M
3300017943\|Ga0187819_10305520	Not Available	924	Open in IMG/M
3300017943\|Ga0187819_10753712	Not Available	548	Open in IMG/M
3300017946\|Ga0187879_10155492	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1292	Open in IMG/M
3300017961\|Ga0187778_10611909	Not Available	731	Open in IMG/M
3300017970\|Ga0187783_10001485	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	17338	Open in IMG/M
3300017970\|Ga0187783_10019254	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5043	Open in IMG/M
3300017970\|Ga0187783_10023743	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4540	Open in IMG/M
3300017972\|Ga0187781_10009360	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	7077	Open in IMG/M
3300017974\|Ga0187777_10909076	All Organisms → cellular organisms → Bacteria	633	Open in IMG/M
3300017975\|Ga0187782_10249301	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1334	Open in IMG/M
3300017975\|Ga0187782_10373211	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1082	Open in IMG/M
3300018001\|Ga0187815_10217896	Not Available	808	Open in IMG/M
3300018058\|Ga0187766_11015692	Not Available	591	Open in IMG/M
3300018062\|Ga0187784_10541708	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	937	Open in IMG/M
3300020581\|Ga0210399_10312570	Not Available	1312	Open in IMG/M
3300020581\|Ga0210399_11113872	Not Available	631	Open in IMG/M
3300020582\|Ga0210395_10458807	Not Available	959	Open in IMG/M
3300020583\|Ga0210401_10040008	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4446	Open in IMG/M
3300021171\|Ga0210405_11137284	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	582	Open in IMG/M
3300021178\|Ga0210408_10404179	Not Available	1088	Open in IMG/M
3300021180\|Ga0210396_10016375	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6882	Open in IMG/M
3300021180\|Ga0210396_10082209	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2924	Open in IMG/M
3300021181\|Ga0210388_10247750	Not Available	1564	Open in IMG/M
3300021181\|Ga0210388_10298333	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1416	Open in IMG/M
3300021401\|Ga0210393_10031465	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4148	Open in IMG/M
3300021401\|Ga0210393_10880624	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	727	Open in IMG/M
3300021404\|Ga0210389_10747582	Not Available	765	Open in IMG/M
3300021475\|Ga0210392_11427983	Not Available	517	Open in IMG/M
3300021478\|Ga0210402_10033083	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4470	Open in IMG/M
3300021560\|Ga0126371_10007557	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	9717	Open in IMG/M
3300021560\|Ga0126371_10480954	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1389	Open in IMG/M
3300026498\|Ga0257156_1026436	Not Available	1167	Open in IMG/M
3300027908\|Ga0209006_10244768	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1544	Open in IMG/M
3300027908\|Ga0209006_10878831	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	721	Open in IMG/M
3300028906\|Ga0308309_10391824	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1190	Open in IMG/M
3300029951\|Ga0311371_11075597	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	946	Open in IMG/M
3300030007\|Ga0311338_10760259	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	971	Open in IMG/M
3300030056\|Ga0302181_10007940	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	6723	Open in IMG/M
3300030740\|Ga0265460_12608217	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	540	Open in IMG/M
3300030741\|Ga0265459_12763789	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	610	Open in IMG/M
3300031231\|Ga0170824_119094353	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	822	Open in IMG/M
3300031525\|Ga0302326_12586016	Not Available	634	Open in IMG/M
3300031708\|Ga0310686_104340455	All Organisms → cellular organisms → Bacteria	15606	Open in IMG/M
3300031708\|Ga0310686_114893790	Not Available	872	Open in IMG/M
3300031823\|Ga0307478_10845869	Not Available	766	Open in IMG/M
3300032008\|Ga0318562_10851809	Not Available	521	Open in IMG/M
3300032059\|Ga0318533_11180493	Not Available	560	Open in IMG/M
3300032160\|Ga0311301_10301336	All Organisms → cellular organisms → Bacteria	2567	Open in IMG/M
3300032174\|Ga0307470_10525373	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	869	Open in IMG/M
3300032261\|Ga0306920_102962210	Not Available	642	Open in IMG/M
3300032261\|Ga0306920_104403475	All Organisms → cellular organisms → Bacteria → Proteobacteria	505	Open in IMG/M
3300032895\|Ga0335074_10005162	All Organisms → cellular organisms → Bacteria	18055	Open in IMG/M
3300032895\|Ga0335074_10005931	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	16918	Open in IMG/M
3300032895\|Ga0335074_10006231	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	16542	Open in IMG/M
3300032895\|Ga0335074_10021022	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	9204	Open in IMG/M
3300032895\|Ga0335074_10065552	All Organisms → cellular organisms → Bacteria	4931	Open in IMG/M
3300032895\|Ga0335074_10068920	All Organisms → cellular organisms → Bacteria	4786	Open in IMG/M
3300032895\|Ga0335074_10074713	Not Available	4560	Open in IMG/M
3300032895\|Ga0335074_10129917	All Organisms → cellular organisms → Bacteria	3241	Open in IMG/M
3300032895\|Ga0335074_10159215	Not Available	2839	Open in IMG/M
3300032895\|Ga0335074_10216821	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2304	Open in IMG/M
3300032895\|Ga0335074_10217396	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2300	Open in IMG/M
3300032895\|Ga0335074_10271957	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1968	Open in IMG/M
3300032895\|Ga0335074_10360551	Not Available	1608	Open in IMG/M
3300032895\|Ga0335074_10369508	Not Available	1579	Open in IMG/M
3300032895\|Ga0335074_10742822	Not Available	932	Open in IMG/M
3300032895\|Ga0335074_11248546	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	620	Open in IMG/M
3300032895\|Ga0335074_11437275	Not Available	555	Open in IMG/M
3300032896\|Ga0335075_10002838	All Organisms → cellular organisms → Bacteria	27703	Open in IMG/M
3300032896\|Ga0335075_10009911	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	14485	Open in IMG/M
3300032896\|Ga0335075_10047572	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6002	Open in IMG/M
3300032896\|Ga0335075_10070460	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4740	Open in IMG/M
3300032896\|Ga0335075_10104314	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3698	Open in IMG/M
3300032896\|Ga0335075_10197659	Not Available	2410	Open in IMG/M
3300032896\|Ga0335075_10265107	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1961	Open in IMG/M
3300032896\|Ga0335075_10614791	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1070	Open in IMG/M
3300032896\|Ga0335075_10678656	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	996	Open in IMG/M
3300032896\|Ga0335075_10709133	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	965	Open in IMG/M
3300032898\|Ga0335072_10031831	All Organisms → cellular organisms → Bacteria	7318	Open in IMG/M
3300032898\|Ga0335072_10293507	All Organisms → cellular organisms → Bacteria	1828	Open in IMG/M
3300032898\|Ga0335072_10395694	All Organisms → cellular organisms → Bacteria	1486	Open in IMG/M
3300033134\|Ga0335073_10100191	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3746	Open in IMG/M
3300033134\|Ga0335073_10127151	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3259	Open in IMG/M
3300033134\|Ga0335073_10617210	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1207	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	85.71%
Aquatic	Environmental → Aquatic	14.29%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	82.35%
Freshwater	Environmental → Aquatic → Freshwater	14.29%
Peat	Environmental → Terrestrial → Peat	3.36%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	39.50%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	36.13%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	14.29%
Loam	Environmental → Terrestrial → Soil → Loam	6.72%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	3.36%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	36.13%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	21.01%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.65%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	10.92%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.72%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.36%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	3.36%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.84%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	27.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	16.81%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	12.61%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	10.92%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	8.40%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	4.20%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	3.36%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.52%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.68%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.68%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.68%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.84%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.84%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.84%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.84%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.84%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300017926	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300026498	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-49-A	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030056	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_3	Environmental	Open in IMG/M
3300030740	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ARE Co-assembly	Environmental	Open in IMG/M
3300030741	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ANR Co-assembly	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25616J43925_102768221	3300002917	Grasslands Soil	MRVHRRLPWIIAAVLAGAGLGAWAGHQIGDGGAGNIALISATAAVLGSFLPGAAVWLRGRVRDRGRPHHPAA*
Ga0062389_1001359762	3300004092	Bog Forest Soil	VSVQRLTLWIIGTAVLCAALGAFLGHHVGDGGSGNIALISLTCAVLGSFLPGAVVWVRARLRDHGGPHRGAA*
Ga0062386_1000314314	3300004152	Bog Forest Soil	VQRQRLAPWIIGTIVACAALGAWAGHQIGDGGAGNIALISATCAVLGSFLPGAVVWLRGRLRDRGRSPAA*
Ga0062388_1016093782	3300004635	Bog Forest Soil	VQRLTLWIIGTAVLCAALGAFLGHHVGDGGSGNIALISLTCAVLGSFLPGAVVWVRARLR
Ga0066388_1005759892	3300005332	Tropical Forest Soil	MTKASRGCQDVSVYRQRLTLWIIGTVLLCAALGALLGHHIGDGGTGNIALISASCAVLGSFLPGTAARLRSRLRGRNRPHQGAA*
Ga0070763_103222102	3300005610	Soil	VTGDDQECQDESVQRRLTPWIIGTAVLFAAIGAWFGHHVGDGGGGNIALISATCAVLGSFLPGAVLWVRARLRDHGRAHRGAA*
Ga0070763_106754752	3300005610	Soil	VCVQFQRLTPWIIGTVVACAAVGAWFGHQIGDGGAGNIVLISLTCAVLGSFVPNAVVWIRARLTGHDPRQGAA*
Ga0070764_102124672	3300005712	Soil	VHRLTLWIIATAVLCAALGAFLGHHVGDGGSGNIALISLTCAVLGSFLPGAVVWVRARLRDHGRPHRGAA*
Ga0070766_100464243	3300005921	Soil	VTGDDQECQDESVQRRLTPWIIGTAVLFAAIGAWFGHHVGDGGGGNIALISATCAVLGSFLPGAVLWVRARLRDHGRPQSGAA*
Ga0126374_103701341	3300009792	Tropical Forest Soil	VSVYRQRLTLWIIGMVLLCAALGALLGHHIGDGGAGNIALISASCAVLGSFLPGTAARLRARLRGRNRPHQGAV*
Ga0126373_100006948	3300010048	Tropical Forest Soil	VTVQPQRLTPWIIGTALFCAALGAWFGHYVGDGRAGYVALISAACAVIGSFFPGAVLWLRTRLRQHGKPHRGAA*
Ga0126373_1000134414	3300010048	Tropical Forest Soil	VARQARGCQDYSVHLQRLTPWIIGTVLVCAALGAWSGHHIGDGGPGNIALISATCAVLGSFLPGAATRIWARLRSRGRPRQGAA*
Ga0126373_103720823	3300010048	Tropical Forest Soil	VLLCAALGALLGHLIGDGGAGNIALISASCAVLGSFLPGTAARLRARLRGRNRPHQGAV*
Ga0126373_106254722	3300010048	Tropical Forest Soil	VSVHRQRLTPWIIGTVVLCAALGAWFGRHVGDGRGGYVALISAACGVIGSFFPGAVLWLRSRLRDQGKPHRGAA*
Ga0126373_108628432	3300010048	Tropical Forest Soil	MTLWIVGTVVLCAVLGAWFGRHVGDGRVGYVALISATCGVIGSFLPGAVLWIRARLRHDGKPHRGAA*
Ga0126378_100509963	3300010361	Tropical Forest Soil	VYRQRLTLWIIGLVLLCAALGALLGHHIGDGGPGNIALISASCAVLGSFLPGTAARLRSWWRGRTQGHISG*
Ga0126378_110645182	3300010361	Tropical Forest Soil	VARQAWGCQDYSVHLQRLTPWIIGTVLVCAALGAWSGHHIGDGGPGNIALISATCAVLGSFLPGAATRIWARLRSRGRPRQGAA*
Ga0126381_1000233234	3300010376	Tropical Forest Soil	MALWIVGTVVLCAVLGAWFGRHVGDGRVGYVALISATCGVIGSFLPGAVLWIRARLRHDGKPHRGAA*
Ga0126381_1000800233	3300010376	Tropical Forest Soil	VYRQRLTLWIIGTVLLCAALGALLGHHIGDGGTGNIALISASCAVLGSFLPGTAARLRRRRPPS*
Ga0126381_1001030214	3300010376	Tropical Forest Soil	VYRQRLTLWIIGTVLLCAALGALLGHHIGDGGAGNIALISASCAVLGSFLPGTAARLRARLRGRNRPHQGAV*
Ga0126381_1003348054	3300010376	Tropical Forest Soil	VHRQHLTPWIIGTVLVCAALGAWSGHHIGDGGTGNIALIGATCAVLGSFLPGAATWIWARFRGRGRPRQGAA*
Ga0126381_1035311721	3300010376	Tropical Forest Soil	VYRQRLTLWIIGMVLLCAAIGALLGHHIGDGGTGNIALISASCAVLGSFLPGTAARLRSRRRGRTQGRISG*
Ga0136449_1000398284	3300010379	Peatlands Soil	VSVQRQRLTFWIIGTVVVCAAVGAWLGHQIGDGGSGNIALISATCAVLGSFLPGAFLWVRARLSDHGRPHQGAA*
Ga0136449_1041247051	3300010379	Peatlands Soil	MTNAWIIATIVACAALGAWGGHQIGDGGAGNIVLVSATCAVLGSFLPGAVAWLHARLRDRGRPHHPAA*
Ga0137363_100172384	3300012202	Vadose Zone Soil	MTFRSRGCQDEVVQRQRLTPWITGSAVLFAALGAWCGRHVGDGGGGNVALISATCAVLGSFLPGAVIWVRARLRDHGRPHRGAA*
Ga0187807_10047585	3300017926	Freshwater Sediment	MQVEVITVAAGCQDRGVHWQRLTGWIIGSVLACAALGAWFGHQLGDGRAGNVALISATCAVVGSFLPAAVRWAHGRVRDRGRPRHGAA
Ga0187807_11366782	3300017926	Freshwater Sediment	VHRQLTRWIIGSVLTCAALGAWFGHLLGDGGAGNIALISATCAVLGSFLPGAVRWARVRRFPHEHRADVLSKDA
Ga0187806_10244443	3300017928	Freshwater Sediment	VQRQRLTPWIIGTVVLCAALGAWLGRHVGDGRGGYVALISATCAVLGSFLPGAVVWLRARLRDHSRPHRGAA
Ga0187801_101583752	3300017933	Freshwater Sediment	MQVEIITVAAGCQDRGVHWQRLTGWIIGSVLACAALGAWFGHQLGDGRAGNVALISATCAVVGSFLPAAVRWAHGRVRDRGRPRHGAA
Ga0187808_100083905	3300017942	Freshwater Sediment	VTVHPQRLTIWIIGTVLLCAALGALAGHHIGDGGTGNIALISATCAVLGSFIPGGAARLLARLRGRKRPHQGAA
Ga0187808_100230872	3300017942	Freshwater Sediment	VHRQGLTVWIVVAVVACAGLGAWLGHHVGSGNTGNIVLIAATCAVLGSFLPGAVVWVRGRLRNH
Ga0187808_101275672	3300017942	Freshwater Sediment	VACLARGCQDYRVHRQYLTLWIIGTVLLCAALGAWAGHHIGDGGTGNIALIGATCAVLGSFLPGATTRMWARLRGRGRPRQGAV
Ga0187808_104639482	3300017942	Freshwater Sediment	VTCTGRGCQDVKVQRHRLTPWIIAAVVACAALGAWAGHHIGDGGGGNIALISATCGVLGSFLPGAVLWVRARLRDRGRPHRDAA
Ga0187808_104706632	3300017942	Freshwater Sediment	VHPQRLTLWIIGTVLICAALGALFGHHIGDGGAGNIALISATCAVLGSFIPGGAVRLVTRLRGRKRPHRNAI
Ga0187819_103055201	3300017943	Freshwater Sediment	VQRQRLTPWIIGTVVLCAALGAWFGRHVGDGRGGYVALISATCAVLGSFLPGAVVWLRARLRDHSRPHRGAA
Ga0187819_107537121	3300017943	Freshwater Sediment	VQRHRLTPWIIAAVVACAALGAWAGHHIGDGGGGNIALISATCGVLGSFLPGAVLWVRARLRDRGRPHRDAA
Ga0187879_101554922	3300017946	Peatland	VQRQRLTPWIIVSVLACAGFGAWFGHRIGDGGPGSIALISATCAVLGSFLPTAVLWVRSRLHPGSRPLP
Ga0187817_111356791	3300017955	Freshwater Sediment	ALGAWAGHQIGDGGAGNIVLVSATCAVLGSFLPGAILWLRGRLRDRRRTPVA
Ga0187778_106119092	3300017961	Tropical Peatland	VHRQRLTLWIIGTVLLCAALGALLGHHIGDGGSGNIALISATCAVLGSFLPGAIVRLLARLRGRNRPHRGAV
Ga0187783_100014855	3300017970	Tropical Peatland	VFRQQLTLWIIGSVLACAAVGAWAGHLLGGGGSGNIALVSATCAVLGSFLPGAVRWTRVRLRGQRPPRPGAA
Ga0187783_100192547	3300017970	Tropical Peatland	VTSHSRGCQDGSVQRQRLTPWIIGAVLVCALLGAWGGDHIGGGGFGYIALIGATCAVLGSFLPGAVIRIRARLRNRGSPDRRAA
Ga0187783_100237434	3300017970	Tropical Peatland	VHGQRLTLWIIATVLACAAFGAWGGHLLGGGGIGYIALISATCAVLGSFVPGAVRWARVRLRGQRPPHRGAA
Ga0187781_100093602	3300017972	Tropical Peatland	VLRQRLTFWIIGSVLACAALGAWAGHLLGGGGSGNIALVSATCAVLGSFLPGAVRWARVRLRGQRPPRPGAA
Ga0187777_109090762	3300017974	Tropical Peatland	MRPVHRQRLTSWIIGSVLACAALGACLGHQLGDGRAGNVALISATCGVLGSFLPGAFRWARVRLSGHHPPDRGTA
Ga0187782_102493012	3300017975	Tropical Peatland	VLRQRLTFWIIGSVLACAALGAWAGHLLGGGGSGNIALVSATCAVLGSFLPGAIRWARVRLRGQRPPRPGAA
Ga0187782_103732111	3300017975	Tropical Peatland	QLTLWIIGSVLACAAVGAWAGHLLGGGGSGNIALVSATCAVLGSFLPGAVRWTRVRLRGQRPPRPGAA
Ga0187815_102178962	3300018001	Freshwater Sediment	RLTGWIIGSVLACAALGAWFGHQLGDGRAGNVALISATCAVVGSFLPAAVRWAHGRVRDRGRPRHGAA
Ga0187766_110156921	3300018058	Tropical Peatland	MQAEVITLAAGCQDRGVHWQRLTGWIIGSVLACAALGAWFGHQLGDGRAGNIALISATCAVVGSFLPSAVRWAHGRVRDRGRPRHGAA
Ga0187784_105417082	3300018062	Tropical Peatland	TRQGCQDGGVLRQRLTFWIIGSVLACAALGAWAGHLLGGGGSGNIALVSATCAVLGSFLPGAIRWARVRLRGQRPPRPGAA
Ga0210399_103125701	3300020581	Soil	VSVQRLTLWIIGTAILCAALGAFLGHHIGDGGSGNIALISLTCAVLGSFLPGAVVWVRARLRDHGRPHRGAA
Ga0210399_111138721	3300020581	Soil	VCVQRQRLTSWIVGTVVVCAAAGAWFGEHVGDGRGGYVALISATCAVLGSFLPGAAARLRARLRHGKPRRGAA
Ga0210395_104588072	3300020582	Soil	VSVQRLTLWIIGTAVLCAALGAFLGHHIGDGGSGNIALISLTCAVLGSFLPGAVVWVRARLRDHGRPHRGAA
Ga0210401_100400083	3300020583	Soil	VHRQHLTPWIIGTVLVCAALGAWYGHHIGDGGSGNIALISATCAVLGSFLPGAATRIWARLRGRGRPRQGAA
Ga0210405_111372842	3300021171	Soil	VHRLTLWIIATAVLCAALGAFLGHHVGDGGSGNIALISLTCAVLGSFLPGAVVWVRARLRDHGRPHRGAA
Ga0210408_104041791	3300021178	Soil	VQRLTLWIIGTAVLCAALGAFLGHHIGDGGSGNIALISLTCAVLGSFLPGAVVWVRARLRDHGRPHRGA
Ga0210396_100163754	3300021180	Soil	VQRLTLWIIGTAVLCAALGAFLGHHIGDGGSGNIALISLTCAVLGSFLPGAVVWVRARLRDHGWPHRGAA
Ga0210396_100822092	3300021180	Soil	VHRQHLTPWIIGAVLVCAALGAWSGHHIGDGGSGNIALISATCAVLGSFLPGAATRIWARLRGRGRPRQGAA
Ga0210388_102477502	3300021181	Soil	VQFQRLTPWIIGTALACAAFGAWFGHHLGDGRTGNVVLISLTCAVLGSFVPNAVTWIRSRLTGQGPRQGAA
Ga0210388_102983333	3300021181	Soil	VASADRGCQDVTVQQRRLTSWILVTVLVCAALGAWFGHQIGDGGTGNVALISATCAVLGSFLPGAVLWVRARLRDHGRPHQGAA
Ga0210393_100314655	3300021401	Soil	VQRLTLWIIGTAVLCAALGAFLGHHIGDGGSGNIALISLTCAVLGSFLPGAVVWVRARLRDHGRPHRGAA
Ga0210393_108806242	3300021401	Soil	VASADRGCQDVTVQQRRLTSWILVTVLVCAALGAWFGHQIGDGGTGNIALVSATCAVLGSFLPGAVLWVRARLRDHGRPHQGAA
Ga0210389_107475822	3300021404	Soil	VEAPGRGCQDYCVHRQHLTPWIIGAVLVCAALGAWSGHHIGDGGSGNIALISATCAVLGSFLPGAATRIWARLRGRGRPRQGAA
Ga0210392_114279831	3300021475	Soil	PWIIGAVLVCAALGAWYGHHIGDGGSGNIALISATCAVLGSFLPGAATRIWARLRGRGRPRQGAA
Ga0210402_100330833	3300021478	Soil	VQRQRLTSWIVGTVVVCAAAGAWFGEHVGDGRGGYVALISATCAVLGSFLPGAAARLRARLRHGKPRRGAA
Ga0126371_100075578	3300021560	Tropical Forest Soil	VSVQQHRMTLWIVGTVVLCAVLGAWFGRHVGDGRVGYVALISATCGVIGSFLPGAVLWIRARLRHDGKPHRGAA
Ga0126371_104809542	3300021560	Tropical Forest Soil	VHLQRLTPWIIGTVLVCAALGAWSGHHIGDGGPGNIALISATCAVLGSFLPGAATRIWARLRSRGRPRQGAA
Ga0257156_10264361	3300026498	Soil	MTLRSRGCQDEVVQRQRLTPWITGSAVLFAALGAWCGRHVGDGGGGNVALISATCAVLGSFLPGAVIWVRARLRDHGRPHRGAA
Ga0209006_102447682	3300027908	Forest Soil	VQFQRLTPWIIAAALAGAGFGAWFGHHLDDGRAGNVVLISLTCAVLGSFVPNAVLWIRTRLTGHGPRQGAA
Ga0209006_108788311	3300027908	Forest Soil	MTVQQRRLTSWIIATVLVCAALGAWFGHQIGDGGGGNIALVSATCAVLGSFLPGAVLWVRARLRDHGRPHQGAA
Ga0308309_103918242	3300028906	Soil	VTGDDQECQDESVQRRLTPWIIGTAVLFAAIGAWFGRHVGDGGGGNIALISATCAVLGSFLPGAVLWVRARLRDHGRPQSGAA
Ga0311371_110755972	3300029951	Palsa	KTVQRQRLTPWIIVSVLACAGLGAWFGHRIGDGGPGNIALISATCAVLGSFLPTAVLWVRSRLHAGSRPLP
Ga0311338_107602591	3300030007	Palsa	TPWIIVSVLACAGLGAWFGHRIGDGGPGNIALISATCAVLGSFLPTAVLWVRSRLHAGSRPLP
Ga0302181_100079407	3300030056	Palsa	VQRQRLTPWIIVSVLACAGLGAWFGHRIGDGGPGNIALISATCAVLGSFLPTAVLWVRSRLHAGSRPLP
Ga0265460_126082171	3300030740	Soil	RLTLWIITTAVLCAALGAFLGHHVDDGGSGNIALISLTCAVLGSFLPGAVVWVRARLRDHGRPHRGAA
Ga0265459_127637891	3300030741	Soil	IRLTLWIIATAVLCAALGAFLGHHVGDGGSGNIALISLTCAVLGSFLPGAVVWVRARLRDHGRPHLGAA
Ga0170824_1190943531	3300031231	Forest Soil	HVPKGRGRRAEVTRGRRGCQDVTVQRQRLTSWIIAAVLLCAALGAWLGHQIGDGGGGNIALISATCAVLGSFLPGAVLWVRARRRDHGWPHQGAA
Ga0302326_125860161	3300031525	Palsa	VAPGGRGWKDVRVQEKRLTPWIIVTVLVCAALGAFFGHHIGDGGPGNIALLSATCAVLGSFLPGGAARLHARLRDRGPRAGAA
Ga0310686_10434045516	3300031708	Soil	VQRQRLTPWIIVSVLACAGLGAWFGHRIGDGGPGNIALISATCAVLGSFLPTAVLWVRSRLHAGNRPLP
Ga0310686_1148937902	3300031708	Soil	VCVQFQRLTPWIIGTVVACAAVGAWFGHQIGDGGAGNIVLISLTCAVLGSFVPNAVVWIRARLTGHDPRQGAA
Ga0307478_108458692	3300031823	Hardwood Forest Soil	VHRQYLTLWIIGTVLLCAALGAWAGHHIGDGGTGNIALIGATCAVLGSFLPGATTRIWARLRGRGRPRQGAA
Ga0318562_108518091	3300032008	Soil	MRQPRLTPWIIGVVVLFGALGALIGHHVGDGGGGSIALISATCAVLGSFVPGAVHWARARRRDQGRPRRGAA
Ga0318533_111804932	3300032059	Soil	VQRYRMTLWIVGTVVLCAVLGAWFGHHVGDGRGGYVALISATCGVIGSFLPGAVLWLRARLRNDGKPNRGAA
Ga0311301_103013364	3300032160	Peatlands Soil	VQRQRLTFWIIGTVVVCAAVGAWLGHQIGDGGSGNIALISATCAVLGSFLPGAFLWVRARLSDHGRPHQGAA
Ga0307470_105253732	3300032174	Hardwood Forest Soil	KDCRVHWQRLTPWIIGTVLLCAALGAWYGHQIGDGGVGNIALISATCAVLGSFLPGGAVRIWARLRARGGPRQGAA
Ga0306920_1029622101	3300032261	Soil	LGQGCQDYRVHRQRLTPWIIGAVLVCAALGAWFGHHIGDGGAGNIALISATCAVLGSFLPGAATRIWARLRSRGRPRQGAA
Ga0306920_1044034752	3300032261	Soil	VHRQRLTPWIIGTVVLCAALGAWFGRHVGDGRGGYVALISAACGVIGSFFPGAVLWLRSRLRDHGKPHRGAA
Ga0335074_1000516211	3300032895	Soil	VYRQGITAWIIGTVLVCGALGALAGHHIGGGGGGNIALISATCAVLGSFLPGSVLQLRARLRARARPDGGGRPRQGAA
Ga0335074_1000593115	3300032895	Soil	VYQQHLTPWIIGAVLVCAAFGAWFGHHIGDGGSGNIALLSATCAVLGSFLPGAVVWVRDRLRARQRAA
Ga0335074_1000623117	3300032895	Soil	VHQQRLTPWIIGTVLVCAALGAWSGHHIGGGGAGNIALISATCAVLGSFVPGVATRIWGRLRSRGRARQDAA
Ga0335074_100210224	3300032895	Soil	VHRQHLTLWIIGTVLLCAALGAWAGHHIGDGGTGNIALIGATCAVLGSFLPGATTRIWARLRGRGRPRQGAV
Ga0335074_100655521	3300032895	Soil	VHPQRLTPWIIGTVLICAALGGWYGHHIGDGGAGNIALISATCAVLGSFLPGGAAKIWARLRGRGSGR
Ga0335074_100689202	3300032895	Soil	VYRQGITAWIIATVVVCAGLGALAGHHVGDGGGGNIALISATCAVLGSFLPGGVLRLRARLRTRARPGDRGRTRQGAA
Ga0335074_100747132	3300032895	Soil	VTSDGLGCQDGSVYRQGITAWIIGAVVVCAALGALAGHHIGDGGGGNIALVSATCAVLGSFLPGSVLQLRARLRSRGRDGGGRPRQGAA
Ga0335074_101299172	3300032895	Soil	VARLAVGCQDYGVHRQHLTAWIIGTVLVCAALGAWAGHHIGDGGTGNIALIGATCAVLGSFLPVTASRIWARLRSRGRPWQGAA
Ga0335074_101592152	3300032895	Soil	VHRQALTLWIIGTVLACAALGAWGGHLLGGGGSGYIALISATCAVVGSFLPGAVRWARVRLHGQQPPHRGAA
Ga0335074_102168212	3300032895	Soil	VHRQHLTPWIIGTVLVCAALGAWAGHHVGDGGSGNIALISATCAVLGSFLPGSATRVWARLRGRSRPRQGAA
Ga0335074_102173962	3300032895	Soil	VHRQHLTLWIIGTVLLCAALGSWAGHHIGDGGTGNIALIGATCAVLGSFLPGATTRIWARLRGRGRPRQGAA
Ga0335074_102719571	3300032895	Soil	VHPQRLTIWIIGTVLVCAALGALAGHHIGDGGSGNIALISATCAVLGSFIPGGAARLLARLRGRKRPHQGAA
Ga0335074_103605512	3300032895	Soil	VHRPHLTLWIIGTVLACAALGAWAGHHVGDGGSGNIALISATCAVLGSFLPGSATRIWARVRARGRPRQGAA
Ga0335074_103695082	3300032895	Soil	VHRQHLTLWIIGAVLVCAALGAWAGHHVGDGGSGNIALISATCAVLGSFLPGSAARIWARLRGRSRPRQGAA
Ga0335074_107428221	3300032895	Soil	RKRGGVARLAPGCQDYRVHRQHLTLWILGTVLLCAALGSWAGHHIGDGGTGNIALIGATCGVLGSFLPGTTTRIWARLRGRGRPRQGAA
Ga0335074_112485461	3300032895	Soil	PWIIGTVLVCAALGAWAGHHVGDGGSGNIALISATCAVLGSFLPGSATRIWARLRGRSRPRQGAGA
Ga0335074_114372751	3300032895	Soil	MTVHRQSLTLWILGSVLVCAALGAWFGHQLGDGGSGNIALISATCAVLGSFLPGAVRWAVARLRGHRPPPHSAA
Ga0335075_100028382	3300032896	Soil	VASTGQGCQDGTVYRQGITAWIIATVVVCAGLGALAGHHVGDGGGGNIALISATCAVLGSFLPGGVLRLRARLRTRARPGDRGRTRQGAA
Ga0335075_1000991113	3300032896	Soil	VHRQHLTLWILGTVLLCAALGSWAGHHIGDGGTGNIALIGATCGVLGSFLPGTTTRIWARLRGRGRPRQGAA
Ga0335075_100475721	3300032896	Soil	QSSRAKRKRGGVARLARGCQDYRVHRQHLTLWIIGTVLLCAALGAWAGHHIGDGGTGNIALIGATCAVLGSFLPGATTRIWARLRGRGRPRQGAV
Ga0335075_100704605	3300032896	Soil	VHRQHLTPWIIATVLVCAALGAWSGHHIGGGGSGNIALISATCAVLGSFLPGAATRIWARLHGRGRPRQGAA
Ga0335075_101043142	3300032896	Soil	VYQQHLTPWIIGAVLVCAAFGAWFGHHIGGGGSGNIALISATCAVLGSFLPGAVVWVRARLRDRQGAV
Ga0335075_101976593	3300032896	Soil	VQRQHLTPWIIGAVLVCAALGAWYGHHIGDGGSGNIALISATCAVLGSFLPGAATRIWARLRGRGRPRQGAA
Ga0335075_102651072	3300032896	Soil	VHWQHLTPWIIGTVLVCAALGAWAGHHVGDGGSGNIALISATCAVLGSFLPGSAARIWARLRGRSRPRQGAA
Ga0335075_106147911	3300032896	Soil	IIGTVLVCAALGAWAGHHVGDGGSGNIALISATCAVLGSFLPGSATRVWARLRGRSRPRQGAA
Ga0335075_106786562	3300032896	Soil	VHRQHLTLWIIGTVLACAALGAWAGHHVGDGGSGNIALISATCAVLGSFLPGSATRIWARVRGRSRPRQGAA
Ga0335075_107091332	3300032896	Soil	VRARGLTPWIIATVLLCAGVGAWFGHRIGGGGPGIIALISATCGVLGSFVPGTVLRLAGRRRHGQRPRQGAA
Ga0335072_100318318	3300032898	Soil	VHPQRLTPWIIGTVLICAALGGWYGHHIGDGGAGNIALISATCAVLGSFLPGGAAKIWARLRGRGTGRPHRGAA
Ga0335072_102935072	3300032898	Soil	VHQQRLTLWIIGTVLLCAALGALLGHHIGDGGSGNIALISATCAVLGSFLPGGAARLVTRLRGRNRPHRGAI
Ga0335072_103956942	3300032898	Soil	VQFHRLTPWIIATMLACAAFGAWAGHQIGDGGAGNIVLISLTCAVLGSFVPNAIVWVRARLGGHGDSEGTA
Ga0335073_101001912	3300033134	Soil	VHRQHLTPWIIGTVLVCAALGAWAGHHVGDGGSGNIALISATCAVLGSFLPGSAARIWARLRGRSRPRQGAA
Ga0335073_101271512	3300033134	Soil	VHPQRLTPWIIGTVLICAALGGWYGHHIGDGGAGNIALISATCAVLGSFLPGGAAKIWARLRGRGSGRPHRGAA
Ga0335073_106172102	3300033134	Soil	MVNRQFVTLWIIASVLAFAALGAWGGHQIGDGGPGNIALLSATGAVLGSFLPNAVLWIRARLRTRPLP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F074265

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences