Metagenome Family F074072

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F074072
Family Type	Metagenome
Number of Sequences	120
Average Sequence Length	110 residues
Representative Sequence	LISIDLVTGEMRRRFGLKFSNTVRPFLARMLRDRRPSLRAKIEVTTTSRGRNRNVKVAIDHLNVVAVIHRAADGSEQRIELAEVPAVVERIKAAQKQIKRPKSTPPPK
Number of Associated Samples	108
Number of Associated Scaffolds	120

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	95.00 %
% of genes from short scaffolds (< 2000 bps)	89.17 %
Associated GOLD sequencing projects	97
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.38

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (55.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (15.000 % of family members)
Environment Ontology (ENVO)	Unclassified (37.500 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (48.333 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 35.29% β-sheet: 15.44% Coil/Unstructured: 49.26%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.38
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.38
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 120 Family Scaffolds
PF01738	DLH	6.67
PF00069	Pkinase	6.67
PF12680	SnoaL_2	5.83
PF01124	MAPEG	4.17
PF00072	Response_reg	1.67
PF03631	Virul_fac_BrkB	1.67
PF00293	NUDIX	0.83
PF07859	Abhydrolase_3	0.83
PF06742	DUF1214	0.83
PF03779	SPW	0.83
PF04542	Sigma70_r2	0.83
PF02560	Cyanate_lyase	0.83
PF00271	Helicase_C	0.83
PF14559	TPR_19	0.83
PF13419	HAD_2	0.83
PF01872	RibD_C	0.83
PF07470	Glyco_hydro_88	0.83
PF07883	Cupin_2	0.83
PF12697	Abhydrolase_6	0.83
PF07690	MFS_1	0.83
PF03306	AAL_decarboxy	0.83
PF07070	Spo0M	0.83
PF14707	Sulfatase_C	0.83
PF09118	GO-like_E_set	0.83

COG ID	Name	Functional Category	% Frequency in 120 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	26.67
COG1295	Uncharacterized membrane protein, BrkB/YihY/UPF0761 family (not an RNase)	Function unknown [S]	1.67
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	0.83
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.83
COG0657	Acetyl esterase/lipase	Lipid transport and metabolism [I]	0.83
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.83
COG1513	Cyanate lyase	Inorganic ion transport and metabolism [P]	0.83
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.83
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	0.83
COG3527	Alpha-acetolactate decarboxylase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.83
COG4326	Stage 0 sporulation-control protein Spo0M	Cell cycle control, cell division, chromosome partitioning [D]	0.83
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.83
COG5361	Uncharacterized conserved protein	Mobilome: prophages, transposons [X]	0.83
COG5402	Uncharacterized protein, contains DUF1214 domain	Function unknown [S]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.00 %
All Organisms	root	All Organisms	45.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.00 %
cellular organisms	root	All Organisms → cellular organisms	45.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.00 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	45.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.00 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	28.33 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.67 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.00 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	20.83 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	1.67 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.83 %
Oligoflexia	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Oligoflexia	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.00 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	20.83 %
unclassified Planctomycetota	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota	0.83 %
Candidatus Brocadiia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia	0.83 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.83 %
Bdellovibrionales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Oligoflexia → Bdellovibrionales	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.00 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	15.00 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	2.50 %
unclassified Candidatus Brocadiae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → unclassified Candidatus Brocadiae	0.83 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.83 %
Bdellovibrionaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Oligoflexia → Bdellovibrionales → Bdellovibrionaceae	0.83 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.00 %
unclassified Myxococcales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales	7.50 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2.50 %
Nannocystineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae	1.67 %
Candidatus Brocadiae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → unclassified Candidatus Brocadiae → Candidatus Brocadiae bacterium	0.83 %
Bdellovibrio	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Oligoflexia → Bdellovibrionales → Bdellovibrionaceae → Bdellovibrio	0.83 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.83 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.00 %
Myxococcales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium	7.50 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2.50 %
Kofleriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae	1.67 %
Candidatus Brocadiae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → unclassified Candidatus Brocadiae → Candidatus Brocadiae bacterium	0.83 %
Bdellovibrio	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Oligoflexia → Bdellovibrionales → Bdellovibrionaceae → Bdellovibrio	0.83 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.83 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.00 %
Myxococcales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium	7.50 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2.50 %
Haliangium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium	1.67 %
Candidatus Brocadiae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → unclassified Candidatus Brocadiae → Candidatus Brocadiae bacterium	0.83 %
Bdellovibrio	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Oligoflexia → Bdellovibrionales → Bdellovibrionaceae → Bdellovibrio	0.83 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.83 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.00 %
Myxococcales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium	7.50 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2.50 %
unclassified Haliangium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → unclassified Haliangium	1.67 %
Candidatus Brocadiae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → unclassified Candidatus Brocadiae → Candidatus Brocadiae bacterium	0.83 %
Bdellovibrio	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Oligoflexia → Bdellovibrionales → Bdellovibrionaceae → Bdellovibrio	0.83 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.83 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.00 %
Myxococcales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium	7.50 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2.50 %
Haliangium sp. UPWRP_2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → unclassified Haliangium → Haliangium sp. UPWRP_2	1.67 %
Candidatus Brocadiae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → unclassified Candidatus Brocadiae → Candidatus Brocadiae bacterium	0.83 %
Bdellovibrio	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Oligoflexia → Bdellovibrionales → Bdellovibrionaceae → Bdellovibrio	0.83 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.83 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000891\|JGI10214J12806_11648337	All Organisms → cellular organisms → Bacteria → Proteobacteria	620	Open in IMG/M
3300003320\|rootH2_10219916	All Organisms → cellular organisms → Bacteria	1647	Open in IMG/M
3300004081\|Ga0063454_100640577	All Organisms → cellular organisms → Bacteria → Proteobacteria	786	Open in IMG/M
3300004114\|Ga0062593_100482429	Not Available	1142	Open in IMG/M
3300004114\|Ga0062593_100886254	All Organisms → cellular organisms → Bacteria	900	Open in IMG/M
3300004156\|Ga0062589_100669140	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium	915	Open in IMG/M
3300004157\|Ga0062590_100035563	Not Available	2588	Open in IMG/M
3300004463\|Ga0063356_101834654	All Organisms → cellular organisms → Bacteria	912	Open in IMG/M
3300004463\|Ga0063356_104604059	Not Available	593	Open in IMG/M
3300005329\|Ga0070683_101680452	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	610	Open in IMG/M
3300005329\|Ga0070683_102335600	Not Available	513	Open in IMG/M
3300005333\|Ga0070677_10845099	Not Available	526	Open in IMG/M
3300005335\|Ga0070666_10073541	All Organisms → cellular organisms → Bacteria	2328	Open in IMG/M
3300005337\|Ga0070682_101745793	All Organisms → cellular organisms → Bacteria → Proteobacteria	542	Open in IMG/M
3300005343\|Ga0070687_100133556	All Organisms → cellular organisms → Bacteria	1436	Open in IMG/M
3300005354\|Ga0070675_101044437	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium	751	Open in IMG/M
3300005355\|Ga0070671_100100521	Not Available	2426	Open in IMG/M
3300005364\|Ga0070673_100018836	All Organisms → cellular organisms → Bacteria	4945	Open in IMG/M
3300005367\|Ga0070667_100223379	All Organisms → cellular organisms → Bacteria	1677	Open in IMG/M
3300005435\|Ga0070714_101924188	Not Available	577	Open in IMG/M
3300005437\|Ga0070710_11072580	Not Available	590	Open in IMG/M
3300005455\|Ga0070663_102149838	All Organisms → cellular organisms → Bacteria → Proteobacteria	503	Open in IMG/M
3300005456\|Ga0070678_102321741	All Organisms → cellular organisms → Bacteria → Proteobacteria	509	Open in IMG/M
3300005518\|Ga0070699_101439140	All Organisms → cellular organisms → Bacteria → Proteobacteria	632	Open in IMG/M
3300005543\|Ga0070672_101570922	Not Available	590	Open in IMG/M
3300005548\|Ga0070665_100708497	Not Available	1020	Open in IMG/M
3300005548\|Ga0070665_102350219	Not Available	536	Open in IMG/M
3300005564\|Ga0070664_101774126	Not Available	585	Open in IMG/M
3300005577\|Ga0068857_100650367	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium	999	Open in IMG/M
3300005578\|Ga0068854_101184387	All Organisms → cellular organisms → Bacteria	684	Open in IMG/M
3300005614\|Ga0068856_101781296	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	628	Open in IMG/M
3300005617\|Ga0068859_100960061	Not Available	938	Open in IMG/M
3300005713\|Ga0066905_101044391	All Organisms → cellular organisms → Bacteria	723	Open in IMG/M
3300005764\|Ga0066903_104891497	Not Available	712	Open in IMG/M
3300006163\|Ga0070715_10642411	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → unclassified Haliangium → Haliangium sp. UPWRP_2	627	Open in IMG/M
3300006755\|Ga0079222_12183333	Not Available	550	Open in IMG/M
3300006904\|Ga0075424_102039270	Not Available	605	Open in IMG/M
3300009094\|Ga0111539_10001990	All Organisms → cellular organisms → Bacteria	27251	Open in IMG/M
3300009101\|Ga0105247_11629614	Not Available	531	Open in IMG/M
3300009551\|Ga0105238_12651320	Not Available	537	Open in IMG/M
3300010359\|Ga0126376_11640560	Not Available	676	Open in IMG/M
3300010366\|Ga0126379_10131669	Not Available	2294	Open in IMG/M
3300010376\|Ga0126381_103009475	Not Available	669	Open in IMG/M
3300010398\|Ga0126383_12795546	Not Available	570	Open in IMG/M
3300010403\|Ga0134123_10705479	Not Available	987	Open in IMG/M
3300011432\|Ga0137428_1202480	All Organisms → cellular organisms → Bacteria	589	Open in IMG/M
3300011441\|Ga0137452_1157124	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium	766	Open in IMG/M
3300012212\|Ga0150985_114253154	Not Available	632	Open in IMG/M
3300012231\|Ga0137465_1095718	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium	890	Open in IMG/M
3300012355\|Ga0137369_10627449	Not Available	745	Open in IMG/M
3300012916\|Ga0157310_10438943	Not Available	553	Open in IMG/M
3300012971\|Ga0126369_12586355	Not Available	592	Open in IMG/M
3300013296\|Ga0157374_12642560	Not Available	530	Open in IMG/M
3300015077\|Ga0173483_10987520	Not Available	503	Open in IMG/M
3300015371\|Ga0132258_10245584	All Organisms → cellular organisms → Bacteria	4372	Open in IMG/M
3300015372\|Ga0132256_102236190	Not Available	651	Open in IMG/M
3300015373\|Ga0132257_102527549	Not Available	667	Open in IMG/M
3300015374\|Ga0132255_104026682	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	624	Open in IMG/M
3300015374\|Ga0132255_104926591	All Organisms → cellular organisms → Bacteria	565	Open in IMG/M
3300016387\|Ga0182040_10998768	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	698	Open in IMG/M
3300018089\|Ga0187774_11259205	Not Available	534	Open in IMG/M
3300021180\|Ga0210396_11459000	Not Available	564	Open in IMG/M
3300021402\|Ga0210385_10414345	All Organisms → cellular organisms → Bacteria → Proteobacteria → Oligoflexia → Bdellovibrionales → Bdellovibrionaceae → Bdellovibrio	1013	Open in IMG/M
3300021405\|Ga0210387_11814427	Not Available	514	Open in IMG/M
3300021477\|Ga0210398_11183226	Not Available	605	Open in IMG/M
3300022756\|Ga0222622_10006492	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	5333	Open in IMG/M
3300022756\|Ga0222622_10538568	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium	838	Open in IMG/M
3300024224\|Ga0247673_1043186	Not Available	634	Open in IMG/M
3300025899\|Ga0207642_11092020	All Organisms → cellular organisms → Bacteria → Proteobacteria	516	Open in IMG/M
3300025903\|Ga0207680_10398637	Not Available	972	Open in IMG/M
3300025904\|Ga0207647_10600251	Not Available	607	Open in IMG/M
3300025905\|Ga0207685_10779383	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → unclassified Haliangium → Haliangium sp. UPWRP_2	525	Open in IMG/M
3300025914\|Ga0207671_11606966	Not Available	500	Open in IMG/M
3300025921\|Ga0207652_11005139	Not Available	733	Open in IMG/M
3300025924\|Ga0207694_11582939	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	552	Open in IMG/M
3300025935\|Ga0207709_11420072	All Organisms → cellular organisms → Bacteria → Proteobacteria	575	Open in IMG/M
3300025945\|Ga0207679_11472025	Not Available	625	Open in IMG/M
3300025960\|Ga0207651_11421578	Not Available	624	Open in IMG/M
3300025981\|Ga0207640_11072599	All Organisms → cellular organisms → Bacteria	712	Open in IMG/M
3300025986\|Ga0207658_11777613	Not Available	563	Open in IMG/M
3300026075\|Ga0207708_10812615	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium	805	Open in IMG/M
3300026078\|Ga0207702_11718612	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	620	Open in IMG/M
3300026118\|Ga0207675_100736852	Not Available	996	Open in IMG/M
3300026118\|Ga0207675_102213778	Not Available	565	Open in IMG/M
3300026121\|Ga0207683_11716239	Not Available	577	Open in IMG/M
3300026281\|Ga0209863_10119065	Not Available	775	Open in IMG/M
3300028380\|Ga0268265_12400299	Not Available	534	Open in IMG/M
3300028800\|Ga0265338_10774019	Not Available	659	Open in IMG/M
3300031236\|Ga0302324_102546324	Not Available	623	Open in IMG/M
3300031249\|Ga0265339_10030783	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	3036	Open in IMG/M
3300031366\|Ga0307506_10123783	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → unclassified Candidatus Brocadiae → Candidatus Brocadiae bacterium	877	Open in IMG/M
3300031366\|Ga0307506_10442438	Not Available	540	Open in IMG/M
3300031679\|Ga0318561_10775293	Not Available	527	Open in IMG/M
3300031708\|Ga0310686_114615801	Not Available	541	Open in IMG/M
3300031713\|Ga0318496_10276650	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	926	Open in IMG/M
3300031716\|Ga0310813_11270306	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	680	Open in IMG/M
3300031716\|Ga0310813_11715367	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	588	Open in IMG/M
3300031747\|Ga0318502_10235194	All Organisms → cellular organisms → Bacteria	1067	Open in IMG/M
3300031769\|Ga0318526_10300335	Not Available	657	Open in IMG/M
3300031770\|Ga0318521_10083952	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1724	Open in IMG/M
3300031782\|Ga0318552_10177027	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1076	Open in IMG/M
3300031799\|Ga0318565_10030942	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium	2418	Open in IMG/M
3300031831\|Ga0318564_10025798	All Organisms → cellular organisms → Bacteria	2473	Open in IMG/M
3300031879\|Ga0306919_11100911	Not Available	606	Open in IMG/M
3300031890\|Ga0306925_10366825	All Organisms → cellular organisms → Bacteria	1546	Open in IMG/M
3300031890\|Ga0306925_10987046	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	860	Open in IMG/M
3300031896\|Ga0318551_10032906	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium	2525	Open in IMG/M
3300031942\|Ga0310916_10952216	Not Available	718	Open in IMG/M
3300032001\|Ga0306922_12144546	Not Available	540	Open in IMG/M
3300032041\|Ga0318549_10064820	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1538	Open in IMG/M
3300032074\|Ga0308173_10362633	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1265	Open in IMG/M
3300032074\|Ga0308173_12356162	Not Available	502	Open in IMG/M
3300032090\|Ga0318518_10509164	Not Available	616	Open in IMG/M
3300032122\|Ga0310895_10292146	Not Available	768	Open in IMG/M
3300032179\|Ga0310889_10607771	Not Available	564	Open in IMG/M
3300032893\|Ga0335069_11389753	Not Available	760	Open in IMG/M
3300033412\|Ga0310810_11487909	Not Available	504	Open in IMG/M
3300034130\|Ga0370494_090553	Not Available	772	Open in IMG/M
3300034268\|Ga0372943_1123217	Not Available	525	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	60.00%
Host-Associated	Host-Associated	40.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	55.83%
Plants	Host-Associated → Plants	40.00%
Aquatic	Environmental → Aquatic	4.17%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	55.00%
Rhizosphere	Host-Associated → Plants → Rhizosphere	22.50%
Rhizoplane	Host-Associated → Plants → Rhizoplane	16.67%
Sediment	Environmental → Aquatic → Sediment	4.17%
Peat	Environmental → Terrestrial → Peat	0.83%
Rhizome	Host-Associated → Plants → Rhizome	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	40.00%
Soil	Host-Associated → Plants → Rhizosphere → Soil	15.83%
Loam	Environmental → Terrestrial → Soil → Loam	11.67%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	10.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.67%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.17%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	4.17%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.33%
Soil	Host-Associated → Plants → Rhizoplane → Soil	1.67%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.83%
Unclassified	Host-Associated → Plants → Rhizome → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	19.17%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	15.83%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	12.50%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	10.83%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.17%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.67%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.17%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.17%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	4.17%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.33%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.50%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.67%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	1.67%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.83%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.83%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.83%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.83%
Unclassified	Host-Associated → Plants → Rhizome → Unclassified → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	15.00%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	8.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.67%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	5.00%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.17%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.33%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	3.33%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.33%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.33%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	2.50%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.50%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.50%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.50%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.67%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.67%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.67%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	1.67%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.67%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	1.67%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.83%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.83%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.83%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.83%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.83%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.83%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.83%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.83%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.83%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.83%
Sugarcane Root And Bulk Soil	Host-Associated → Plants → Rhizome → Unclassified → Unclassified → Sugarcane Root And Bulk Soil	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.83%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300003320	Sugarcane root Sample H2	Host-Associated	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011432	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT718_2	Environmental	Open in IMG/M
3300011441	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT513_2	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012231	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT828_2	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012916	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S213-509R-2	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300018089	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MG	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300024224	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK14	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026281	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046 (SPAdes)	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031249	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG	Host-Associated	Open in IMG/M
3300031366	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 25_S	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032074	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032122	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4	Environmental	Open in IMG/M
3300032179	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300034130	Peat soil microbial communities from wetlands in Alaska, United States - Collapse_03_16	Environmental	Open in IMG/M
3300034268	Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_FRD_1.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10214J12806_116483371	3300000891	Soil	FGLKFSNTVRPFLARMLRDRRPGLRPKIEVTTTSRGKNRNLKVAIDHLNVVAVIHRAADGTEQRIELADVPAVVDRIKAAQKKPARPKAPKSTEPDEPTFP*
rootH2_102199163	3300003320	Sugarcane Root And Bulk Soil	ARLLRDRRPELREKIEVTTTSRGRNRNVKVALDHLEVVAVIHRTSAGLEERVALADVPALVERLKSEAKPKKRGSEPPEP*
Ga0063454_1006405772	3300004081	Soil	KFSNTVRPFLARMLRDRHPSLRSKIEVTTTSRGKNRNLKVAIDHLNVTAVIHRAADGSEQRIELADVPAVVEGIKAAQKQLPRRKSAPQPD*
Ga0062593_1004824291	3300004114	Soil	RRRFGLKFSNTVRPFLARMLRDRRPSLRAKIEVTTTSRGKNRNVKVAIDHLNVVAVIHRASDGSEQRIELADVPAVVDRIKAAQKSVKR*
Ga0062593_1008862543	3300004114	Soil	GLKFSNTVRPFLARMLRDRRPGLRPKIEVTTTSRGKNRNVKVAIDHLNVVAVIHRAADGTEQRIELADVPAVVDRIKAAQKKPARPKAPKSTEPDEPDELTFP*
Ga0062589_1006691401	3300004156	Soil	ISIDLVTGEMRRRFHLKFSNTVRPFLARMLRDRRPELRSKIEVTTTSRGKNRNVKVAIDHLDVVAVIHRAADGTEQRVDLADIPAVVERIKAAQKQSKRALRQRNTDP*
Ga0062590_1000355634	3300004157	Soil	GLKFSNTVRPFLARMLRDRRPSLRAKIEVTTTSRGKNRNVKVAIDHLNVVAVIHRASDGSEQRIELADVPAVVDRIKAAQKSVKR*
Ga0063356_1018346542	3300004463	Arabidopsis Thaliana Rhizosphere	IDLVTGEMRRRFHLKFSNTVRPFLARMLRDRRPELRPKIEVTTTSRGKNRNVKVAIDHLDVVAVIHRATDGTEQRVDLADIPGVVEQIKAAKKQASKRAKPASPGTD*
Ga0063356_1046040592	3300004463	Arabidopsis Thaliana Rhizosphere	RRFHLKFSNTVRPFLARMLRDRRPELRAKIEVTTTSRGKNRNVKVAIDHLDVVAVIHRAADGTEQRVAVADIPGVVEQLKAAQKQLKRAKPVP*
Ga0070683_1016804522	3300005329	Corn Rhizosphere	ARGDELISIDLVTGEMRRRFGLKFSNTVRPFLARMLRDRRPGLRPKIEVTTTSRGKNRNLKVAIDHLNVVAVIHRAADGTEQRIELADVPAVVDRIKAAQKKPARPKAPKSTEPDEPTFP
Ga0070683_1023356002	3300005329	Corn Rhizosphere	PFLARMLRDRRPELRPKIEVTTTSRGKNRNVKVAIDHLDVVAVIHRAADGTEQRVDVADIPGVVEQIKAAQKLSKRAKPDR*
Ga0070677_108450991	3300005333	Miscanthus Rhizosphere	DWAARGDELISIDLVTGEMRRRFGLKFSNTVRPFLARMLRDRRPSLRAKIEVTTTSRGKNRNVKVAIDHLNVVAVIHRAADGTEQRIELADVPAVVERIKAAQKAARPKPAKPPADTTPF
Ga0070666_100735414	3300005335	Switchgrass Rhizosphere	GEMRRRFGLKFSNTVRPFLARMLRDRRPSLRAKIEVTTTSRGKNRNVKVAIDHLNVVAVIHRTADGSEQRIELADIPAVVERIKAAQKQNERRKSTTPAE*
Ga0070682_1017457932	3300005337	Corn Rhizosphere	GEMRRRFGLKFSNTVRPFLARMLRDRRPSLRAKIEVTTTSRGKNRNVKVAIDHLNVVAVIHRASDGSEQRIELADVPAVVDRIKAAQKSVKR*
Ga0070687_1001335561	3300005343	Switchgrass Rhizosphere	RRFHLKFSNTVRPFLARMLRDRRPELRSKIEVTTTSRGKNRNVKVAIDHLDVIAVIHRAADGSEQRIDLADIPGVVEQIKATQKQAKRARPGAGGAMAGPQPAR*
Ga0070675_1010444372	3300005354	Miscanthus Rhizosphere	LKFSNTVRPFLARMLRDRRPELRTKIEVTTTSRGKNRNVKVAIDHLDVVAVIHRAADGTEQRVAVADIPGVVEQIKAAQKQSKRALRPRNTDP*
Ga0070671_1001005214	3300005355	Switchgrass Rhizosphere	NTVRPFLARMLRDRRPSLRAKIEVTTTSRGKNRNVKVAIDHLNVVAVIHRASDGSEQRIELADVPAVVDRIKAAQKSVKR*
Ga0070671_1005791013	3300005355	Switchgrass Rhizosphere	VRPFLARMLRDRRPGLRPKIEVTTTSRGKNRNLKVAIDHLNVVAVVHRAADGTEQRIELADVPAVVEQIKAAQKKPARTKKAAPEPDEPTFP*
Ga0070673_1000188361	3300005364	Switchgrass Rhizosphere	KFSNTVRPFLARMLRDRRPSLRAKIEVTTTSRGKNRNVKVAIDHLNVVAVIHRAADGTEQRIELADVPAVVERIKAAQKAARPKPARPPADTTPF*
Ga0070667_1002233793	3300005367	Switchgrass Rhizosphere	RGDQLISIDLVTGEMRRRFGLKFSNTVRPFLARMLRDRRPSLRAKIEVTTTSRGKNRNVKVAIDHLNVVAVIHRTADGSEQRIELADIPAVVERIKAAQKQNERRKSTTPAE*
Ga0070714_1019241881	3300005435	Agricultural Soil	RGDELISIDLVTGEMRRRFGLKFSNTVRPFLARMLRDRRPSLRAKIEVTTTSRGKNRNVKVAIDHLNVVAVVHRASDGSEQRIELADVPAVVERIKSAQKARRTKDADHQD*
Ga0070710_110725802	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	IDLVTGEMRRRFGLKFSNTVRPFLARMLRDRRPSLRDKIEVTTTSRGKNRHVKVAIDHLNVIALIHRAADGTEQRIELADVPAVVARIKAEQAQRKRATSTEAPK*
Ga0070663_1021498381	3300005455	Corn Rhizosphere	VRPFLARMLRDRRPSLRAKIEVTTTSRGKNRNVKVAIDHLNVVAVIHRASDGSEQRIELADVPAVVDRIKAAQKSVKR*
Ga0070678_1023217411	3300005456	Miscanthus Rhizosphere	LEELYPAAETVAIDWAARGDELISIDLVTGEMRRRFGLKFSNTVRPFLARMLRDRRPSLRAKIEVTTTSRGKNRNVKVAIDHLNVVAVIHRASDGSEQRIELADVPAVVDRIKAAQKSVKR*
Ga0070699_1014391402	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	LEALYPSAETVATEWAARGDELISIDLVTGEMRRRFGLKFSNTVRPFLARMLRDRRPSLRAKIEVTTTSRGKNRNVKVAIDHLNVVAVIHRDADGTEQRIELADVPAVVDRIKAAQKKAARPKPTTTP*
Ga0070672_1015709222	3300005543	Miscanthus Rhizosphere	RFHLKFSNTVRPFLARMLRDRRPELRPKIEVTTTSRGKNRNVKVAIDHLDVVAVIHRAADGTEQRVDLADIAGVVERIKAAQKQSKRAKPLPR*
Ga0070665_1007084972	3300005548	Switchgrass Rhizosphere	RFHLKFSNTVRPFLARMLRDRRPELRTKIEVTTTSRGKNRNVKVAIDHLDVIAVIHRAADGTERRVDVADIPGVVEQIKAAQKQSKRAKPGK*
Ga0070665_1023502191	3300005548	Switchgrass Rhizosphere	MADLEALYPAAETVAIDWAARGDELISIDLVTGEMRRRFHLKFSNTVRPFLARMLRDRRPELRPKIEVTTTSRGKNRNVKVAIDHLDVVAVIHRAADGTEQRVDLADIAGVVERIKAAQKQSKRAKPLPR*
Ga0070664_1017741262	3300005564	Corn Rhizosphere	LVTGEMRRRFHLKFSNTVRPFLARMLRDRRPELRPKIEVTTTSRGKNRNVKVAIDHLDVVAVIHRAADGTEQRVDVADIPGVVEQIKAAQKLSKRAKPDR*
Ga0068857_1006503673	3300005577	Corn Rhizosphere	DELISIDLVTGEMRRRFHLKFSNTVRPFLARMLRDRRPELRSKIEVTTTSRGKNRNVKVAIDHLDVVAVIHRAADGTEQRVDLADIPAVVERIKAAQKQSKRALRQRNTDP*
Ga0068854_1011843871	3300005578	Corn Rhizosphere	GEMRRRFGLKFSNTVRPFLARMLRDRRPGLRPKIEVTTTSRGKNRNLKVAIDHLNVVAVVHRAADGTEQRIELADVPAVVDRIKAAQKKPARPKSKKPPEEPTFP*
Ga0068856_1017812962	3300005614	Corn Rhizosphere	DELISIDLVTGEMRRRFGLKFSNTVRPFLARMLRDRRPALRPKIDVTTTSRGKNRNVKVAIDHLNVVAVIHRAPDGGEHRIELADVPAVVEQMKAAQKQKKRPKSEGAPE*
Ga0068859_1009600611	3300005617	Switchgrass Rhizosphere	LEALYPAAETVANDWAARGDELISIDLVTGEMRRRFGLKFSNTVRPFLARMLRDRRPSLRAKIEVTTTSRGKNRNVKVAIDHLNVVAVIHRAADGTEQRIELADVPAVVERIKAAQKAARPKPARPPADTTPF*
Ga0066905_1010443912	3300005713	Tropical Forest Soil	ELISIDLVTGEMRRRFGLKFSNTVRPFLARMLRDRRPSLRAKIEVTTTSRGKNRNVKVAIDHLNVVAVIHRASDGSEQRIELADVPAVVERIKAAQKRGARTAP*
Ga0066903_1048914971	3300005764	Tropical Forest Soil	RFGLKFSNTVRPFLARMLRDRHPSLRAKIEVTTTSRGKNRNLKVAIDHLNVVAVVHRAADGSEQRIELADVPAVVDQLRSAQKPTKRPKSKGPSTP*
Ga0070715_106424112	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	LVTGEMRRRFGLKFSNTVRPFLARMLRDRRPSLRARIEVTTTSRGKNRNVKVAIDHLNVVAVIHRASDGSEQRIELADVPAVVDRIKSAQKAERTTKARRGA*
Ga0079222_121833331	3300006755	Agricultural Soil	MRRRFGLKFSNTVRPFLARMLRDRRPSLRAKIEVTTTSRGKNRNVKVAIDHLNVVAVIHRAPDGSEQRIELADVPAAAARIKAAQAPNERRKPAEPKAKTKADSDVPF*
Ga0075424_1020392701	3300006904	Populus Rhizosphere	LEALYPAAETVATEWAARGDQLISIDLVTGEMRRRFGLKFSNTVRPFLARMLRDRRPSLRAKIEVTTTSRGKNRNVKVAIDHLNVVAVIHAASDGTEQRIALADVPAVVERIKAAQKQNERRKPTKPTE*
Ga0111539_1000199025	3300009094	Populus Rhizosphere	MRRRFHLKFSNTVRPFLARMLRDRRPELRPKIEVTTTSRGKNRNVKVAIDHLDVVAVIHRAADGSEQRVDVADIPGVVEQIKAAQKQSKRAKPGR*
Ga0105247_116296141	3300009101	Switchgrass Rhizosphere	LVTGEMRRRFGLKFSNTVRPFLARMLRDRRPSLRAKIEVTTTSRGKNRNVKVAIDHLNVVAVIHRTADGSEQRIELADIPAVVERIKAAQKQNERRKSTTPAE*
Ga0105238_126513202	3300009551	Corn Rhizosphere	LKFSNTVRPFLARMLRDLRPALRPKIDVTTTSRGKNRNVKVAIDHLDVVAVIHRAADGREQRIELADVPAVVEGMKAAQKEKKRPKSPAAPR*
Ga0126376_116405602	3300010359	Tropical Forest Soil	YPAAETVAIEWAGRGDELISIDLVTGEMRRRFGLKFSNTVRPFLARMLRDRRPSLRAKIEVTTTSRGKNRNVKVAIDHLNVVAVIHRASDGSEQRIELADVPAVVDRIKSAQKQNERRKPTKPAE*
Ga0126379_101316691	3300010366	Tropical Forest Soil	PSAETVAIEWAARGDELISIDLVTGEMRRRFGLKFSNTVRPFLARMLRDRRPALRAKIEVTTTSRGKNRNVKVAIDHLNVVAVIHRASDGSEQRIELADVPAVVDRIKAAQKQNQRRKPTKPAE*
Ga0126381_1030094752	3300010376	Tropical Forest Soil	VTGEMRRRFGLKFSNTVRPFLARMLRDRRPSLRGKIEVTTTSRGRNRNVKVAIDHLNVVAVIHRAADGSEQRIELADVPAEVERIKAAQKQIKRPKSTPPPK*
Ga0126383_127955461	3300010398	Tropical Forest Soil	LYPAAETVATEWDARGDELISIDLVTGEMRRRFGLKFSNTVRPFLARMLRERRPSLRGKIEVTTTSRGRNRNVKVAIDHLNVVAVIHRAADGSEQRIELADVPAVVERIKAAQKQIKRPKSTPPPK*
Ga0134123_107054792	3300010403	Terrestrial Soil	EELYPAAETVAIDWAARGDELISSDLVTGEMRRRFGLKFSNTVRPFLARMLRDRRPSLRAKIEVTTTSRGKNRNVKVAIDHLNVVAVIHRASDGSEQRIELADVPAVVDRIKAAQKSVKR
Ga0137428_12024801	3300011432	Soil	WAARGDELISIDLVTGEMRRRFYLKFSNTVRPFLARMLRDRRPELRAKIEVTTTSRGKNRNVKVAIDHLDVVAVIHRAADGTEQRVDLADIPGVVEQIKAAQKQSKRALRRQNTDP*
Ga0137452_11571242	3300011441	Soil	QWAARGDELISIDLVTGEMRRRFHLKFSNTVRPFLARMLRDRRPELRPKIEVTTTSRGKNRNVKVAIDHLDVVAVIHRAADGTEQRVAVADIPGVVEQIKAAQKQSKRALRRPNMDP*
Ga0150985_1142531541	3300012212	Avena Fatua Rhizosphere	MRRRFGLKFSNTVRPFLARMLRDRRPSLRPKIEVTTTSRGKNRNVKVAIDHLDVVAVIHRTADGTEQRIDLADVAAVVDRLKAAQKQAKLTKAAKPARQSP*
Ga0137465_10957181	3300012231	Soil	MRRRFHLKFSNTVRPFLARMLRDRRPELRPKIEVTTTSRGKNRNVKVAIDHLDVVAVIHRAADGTEQRVAVADIPGVVEQIKAAQKQSKRALRRPNMDP*
Ga0137369_106274492	3300012355	Vadose Zone Soil	LEELYPAAEKVAIDWAARGDELISIDLVTGEMRRRFGLKFSNTVRPFLARMLRDRRPSLRPKIEVTTTSRGKNRNLKVAIDHLNVIAVIHRTADGSEQRIELGDVQAVVDQIKAAQKQSKRARAAKPQK*
Ga0157310_104389431	3300012916	Soil	RRFHLKFSNTVRPFLARMLRDRRPELRPKIEVTTTSRGKNRNVKVAIDHLDVVAVIHRAADGSEQRVDLADVPGVVEQIKAAQKQSKRTKPGR*
Ga0126369_125863551	3300012971	Tropical Forest Soil	LYPAAETVAMEWSGRGDELISIDLVTGEMRRRFGLKFSNTVRPFLARMLRDRRPSLRAKIEVTTTSRGKNRNVKVAIDHLNVVAVIHRAADGSEQRIELADVPAVVDRIKAAQKQNERRRATKPAE*
Ga0157374_126425601	3300013296	Miscanthus Rhizosphere	LISIDLVTGEMRRRFGLKFSNTVRPFLARMLRDRRPLLREKIEVTTTSRGKNRNLKVAIDHLNVVAVIHVAADGSEQRIELQDVPAVVEQIKSAQKQKERRKPARPAE*
Ga0173483_109875202	3300015077	Soil	VATEWAARGDELISIDLVTGEMRRRFGLKFSNTVRPFLARMLRDRRPGLRPKIEVTTTSRGKNRNLKVAIDHLNVVAVIHRAADGTEQRIELADVPAVVDRIKAAQKKPARPKAPKSTEPDEPTFP*
Ga0132258_102455841	3300015371	Arabidopsis Rhizosphere	DLVTGEMRRRFHLKFSNTVRPFLARMLRDRRPELRPRIEVTTTSRGKNRNVKVAIDHLDVVAVIHRAADGTEQRVDLADIPGIVEQIKAAKKQSKRAKP*
Ga0132256_1022361901	3300015372	Arabidopsis Rhizosphere	MRRRFGLKFSNTVRPFLARMLRDRRPSLRAKIEVTTTSRGKNRNVKVAIDHLNVVAVIHRTADGSEQRIELADVPAVVERIKAAQKQNDRRKPTSPAE*
Ga0132257_1025275492	3300015373	Arabidopsis Rhizosphere	DWAARGDELISIDLVTGEMRRRFGLKFSNTVRPFLARMLRDRRPSLRAKIEVTTTSRGKNRNVKVAIDHLNVVAVIHRAADGTEQRIELADVPAVVERIKAAQKAARPKAAKPPTPF*
Ga0132255_1040266821	3300015374	Arabidopsis Rhizosphere	EMRRRFGLKFSNTVRPFLARMLRDRRPSLRAKIEVTTTSRGKNRNVKVAIDHLNVVAVIHRASDGSEQRIELADVPAVVERIKAAQKQNERRKPTPPAE*
Ga0132255_1049265911	3300015374	Arabidopsis Rhizosphere	ELISIDLVTGEMRRRFHLKFSNTVRPFLARMLRDRRPELRPKIEVTTTSRGKNRNVKVAIDHLDVVAVIHRAADGTEQRIDLADIPGVVEQIKAAKKQASKRAKPASTGTD*
Ga0182040_109987681	3300016387	Soil	LEELYPAAETVAIEWATRGDELISIDLVTGEMRRRFGLKFSNTVRPFLARMLRDRRPSLRAKIEVTTTSRGKNRNVKVAIDHLNVVAVIHRAADGREERIELADVPAVVDRIKIAQKQLKRSKPTPALK
Ga0187774_112592051	3300018089	Tropical Peatland	AGRGDELISIDLVTGEMRRRFGLKFSNTVRPFLARMLRDRRPSLRAKIEVTTTSRGKNRNLKVAIDHLNVVAVIHVAADGSEQRIELADVPAVVARIKSEQKQNQRRKPAQSAE
Ga0210396_114590002	3300021180	Soil	VRPFLARTLRDRRPALRPKIEVTTTSRGRNRNIKVAIDHLDVIAVIHRTPEGAEQRIDLADIPAVVERVKAAQKPAKRRGPAAPGEREPPF
Ga0210385_104143451	3300021402	Soil	TGEMRRRFRLKFSNTVRPFLARMLRDRRPSLRDRIEVTTTSRGRNRNVKVAIDHLNVVAVIHRGADGNEQRIELADVPAVVEGIKAAQKQTKRKSKPPPK
Ga0210387_118144271	3300021405	Soil	LEWAARGDELISIDLVTGEMRRRYHLKFSNTVRPFLARMLRDRRPGLRPKIEVTTTSRGRNRNIKVAIDHLDVIAVIHRTPEGAEQRIDLADIPAVVERLKAAQKRTKRRGPAAPGESEPPF
Ga0210398_111832262	3300021477	Soil	EALYPAAETVASEWAARGDEVISIDLVTGELRRRFGLKFSNTVRPFLARMLRDRRPSLREKIEVTTTSRGRNRNVKVAIDHLNVIAVIHRAADGSEQRIELADVPAAVERIKGAQKQIKRPRSTSQPK
Ga0222622_100064921	3300022756	Groundwater Sediment	TGEMRRRFHLKFSNTVRPFLARMLRDRRPVLRDKIEVTTTSRGRNRNLKVAIDHLDVVAVINRTPEGGEERIELAEIPAVVERLKAAQKTTKRRAPGAAAGPDDAG
Ga0222622_105385682	3300022756	Groundwater Sediment	DLVTGEMRRRFHLKFSNTVRPFLARMLRDRRPELRPRIEVTTTSRGKNRNVKVAIDHLDVIAVIHRAADGTEQRVDVADIPGVVEQIKAAQKQSKRAKPDR
Ga0247673_10431862	3300024224	Soil	IDLVTGEMRRRFGLKFSNTVRPFLARMLRDRRPSLRAKIEVTTTSRGKNRNLKVAIDHLNVVAVIHVAADGSEQRIELADVPAVVAGIKAAQKQNERRRPSKPADDLTVTSAKTDT
Ga0207642_110920201	3300025899	Miscanthus Rhizosphere	LVTGEMRRRFGLKFSNTVRPFLARMLRDRRPSLRAKIEVTTTSRGKNRNVKVAIDHLNVVAVIHRASDGSEQRIELADVPAVVDRIKAAQKSVKR
Ga0207680_103986371	3300025903	Switchgrass Rhizosphere	LEWAARGDELISIDLVTGEMRRRFGLKFSNTVRPFLARMLRDRRPSLRAKIEVTTTSRGKNRNVKVAIDHLNVVAVVHRASDGSEQRIELADVPAVVDRIKAAQKSVKR
Ga0207647_106002511	3300025904	Corn Rhizosphere	ELISIDLVTGEMRRRFGLKFSNTVRPFLARMLRDRRPSLRAKIEVTTTSRGKNRNVKVAIDHLNVVAVIHRAADGTEQRIELADVPAVVERIKAAQKAARPKAAKPPADTTPF
Ga0207685_107793832	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	LVTGEMRRRFGLKFSNTVRPFLARMLRDRRPSLRARIEVTTTSRGKNRNVKVAIDHLNVVAVIHRASDGSEQRIELADVPAVVDRIKSAQKAERTTKARRGA
Ga0207671_116069661	3300025914	Corn Rhizosphere	WANRGDPLISIDLVTGEMRRRFHLKFSNTVRPFLARMLRDRRSVLREKIEVTTTSRGRNRNLKIALDHLDVVAVIHRTEAGEERVELADVAAVAERRKAAQKAKTAKTAPPSED
Ga0207652_110051391	3300025921	Corn Rhizosphere	ALYPAAETVALEWAARGDELISIDLVTGEMRRRFGLKFSNTVRPFLARMLRDRRPSLRAKIEVTTTSRGKNRNVKVAIDHLNVVAVVHRASDGSEQRIELADVPAVVERIKSAQKARRTKDADHQD
Ga0207694_115829392	3300025924	Corn Rhizosphere	LKFSNTVRPFLARMLRDLRPALRPKIDVTTTSRGKNRNVKVAIDHLDVVAVIHRATDGREQRIELADVPAVVEGMKAAQKEKKRPKSPAAPR
Ga0207709_114200721	3300025935	Miscanthus Rhizosphere	LISIDLVTGEMRRRFGLKFSNTVRPFLARMLRDRRPSLRAKIEVTTTSRGKNRNVKVAIDHLNVVAVIHRASDGSEQRIELADVPAVVDRIKAAQKSVKR
Ga0207679_114720251	3300025945	Corn Rhizosphere	QWAARGDELISIDLVTGEMRRRFHLKFSNTVRPFLARMLRDRRPELRPKIEVTTTSRGKNRNVKVAIDHLDVVAVIHRAADGTEQRVDVADIPGVVEQIKAAQKLSKRAKPDR
Ga0207651_114215782	3300025960	Switchgrass Rhizosphere	GEMRRRFHLKFSNTVRPFLARMLRDRRPELRPKIEVTTTSRGKNRNVKVAIDHLDVVAVIHRAADGTEQRVDLADIAGVVERIKAAQKQSKRAKPLPR
Ga0207640_110725991	3300025981	Corn Rhizosphere	ISIDLVTGEMRRRFGLKFSNTVRPFLARMLRDRRPGLRPKIEVTTTSRGKNRNLKVAIDHLNVVAVVHRAADGTEQRIELADVPAVVDRIKAAQKKPARPKSKKPPEEPTFP
Ga0207658_117776132	3300025986	Switchgrass Rhizosphere	MGTKPERKARTAETVAIEWAGRGDELISIDLVTGEMRRRFGLKFSNTVRPFLARMLRDRRPSLRAKIEVTTTSRGKNRNVKVAIDHLNVVAVIHRTADGSEQRIELADIPAVVERIKAAQKQNERRKSTTPAE
Ga0207708_108126152	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	QLGFALVTGEMRRRFHLKFSNTVRPFLARMLRDRRPELRAKIEVTTTSRGKNRNVKVAIDHLDVVAVIHRAADGAEQRVDLADIPGVVERIKAAQKQSKRAKPVR
Ga0207702_117186122	3300026078	Corn Rhizosphere	SIDLVTGEMRRRFGLKFSNTVRPFLARMLRDRRPALRPKIDVTTTSRGKNRNVKVAIDHLNVVAVIHRAPDGGEHRIELADVPAVVEQMKAAQKQKKRLKSEGAPE
Ga0207675_1007368521	3300026118	Switchgrass Rhizosphere	EALYPSAEIVALQWAARGDELISIDLVTGEMRRRFHLKFSNTVRPFLARMLRDRRPELRPKIEVTTTSRGKNRNVKVAIDHLDVVAVIHRAADGTEQRIELADVPAVVERIKAAQKAARPKPARPPADTTPF
Ga0207675_1022137781	3300026118	Switchgrass Rhizosphere	WAARGDQLISIDLVTGEMRRRFGLKFSNTVRPFLARMLRDRRPSLRAKIEVTTTSRGKNRNLKVAIDHLNVVAVIHRAADGTEQRVDLADIAGVVERIKAAQKQSKRAKPLPR
Ga0207683_117162391	3300026121	Miscanthus Rhizosphere	LKFSNTVRPFLARMLRDRRPSLRAKIEVTTTSRGKNRNVKVAIDHLNVVAVIHRAADGTEQRIELADVPAVVERIKAAQKAARPKPARPPADTTPF
Ga0209863_101190651	3300026281	Prmafrost Soil	LVTGEMRRRFHLRFSNTVRPFLSRMLRDRRPGLRPKIEVTTTSRGRNRNIKVAIDHLDVVAVIHRTPEGSEQRIELADIPAVVEREKAAQKRTKRRDPAAPTERE
Ga0268265_124002991	3300028380	Switchgrass Rhizosphere	LQWAARGDELISIDLVTGEMRRRFHLKFSNTVRPFLARMLRDRRPELRSKIEVTTTSRGKNRNVKVAIDHLDVVAVIHRAADGTEQRVDLADIPAVVERIKAAQKQSKRALRQRNTDP
Ga0265338_107740191	3300028800	Rhizosphere	ETIALEWAARGDELISIDLVTGEIRRRFHLRFSNTVRPFLARMLRDRRPGLRSKIEVTTTSRGRNRNIKVAIDHLDVVAVIHRSPEGGEERIELADIPAVVERLKAARKPTKKPTTQPTKQSTK
Ga0302324_1025463241	3300031236	Palsa	MADLEALYPAAETVAGEWDARGDELISIDLVTGEMRRRFGLRFSNTVRPFLARMLRDRRPSLREKIEVATTSRGRNRNVKVAIDHLNVVAVIHRTADGSEQRIELADIPAAVERIKAAQKEPKRAKSTPRK
Ga0265339_100307831	3300031249	Rhizosphere	AETVAMAWAGRGDELISIDLVTGEMRRRFGLKFSNTVRPFLARMLRDRRPTLRTKIEVTTTSRGKNRNLKVAIDHLNVVAVIHVASDGSEQRIELADVPAVVDQIKAAQKQNQRRKPTKPAE
Ga0307506_101237831	3300031366	Soil	LVTGEMRRRFHLKFSNTVRPFLARMLRDRRPGLRDKIEVTTTSRGRNRNLKVAIDHLDVVAVIHRTPDGGEERIDLAEIPAVVERLKAAQKTTKRRAPIAPAGPDDDAG
Ga0307506_104424382	3300031366	Soil	AAETVATEWAARGDPLISIDLVTGEMRRRYHLKFSNTVRPFLARMLRDRRPGLRDKIEVTTTSRGRNRNLKVAIDHLDVVAVIHRTPEGGEERIELADIPAVVERLKAARQSTKRRSPAAEPDAG
Ga0318561_107752931	3300031679	Soil	AWAARGDELISIDLVTGEMRRRFGLKFSNTVRPFLARMLRDRRPSLRAKIEVTTTSRGKNRNVKVAIDHLNVVAVIHRAADGREERIELADVPAVVDRIKIAQKQLKRSKPTPALK
Ga0310686_1146158012	3300031708	Soil	EMRRRFGLKFSNTVRPFLARMLRDRRPSLREKIEVTTTSRGRNRNVKIALDHLSVVAVIHRAADGSEQRIELADVPAVVERMKAAQKQSKRPKSTPAPK
Ga0318496_102766501	3300031713	Soil	YPAAETVAVAWAARGDELISIDLVTGEMRRRFGLKFSNTVRPFLARMLRDRRPSLRAKIEVTTTSRGKNRNVKVAIDHLNVVAVIHRAADGREERIELADVPAVVDRIKIAQKQLKRSKPTPALK
Ga0310813_112703062	3300031716	Soil	ATEWAARGDELISIDLVTGEMRRRFGLKFSNTVRPFLARMLRDRRPGLRPKIEVTTTSRGKNRNLKVAIDHLNVVAVIHRAADGTEQRIELADVPAVVDRIKAAQKKPARPKAPKSTEPDEPTFP
Ga0310813_117153671	3300031716	Soil	DLEALYPAAERVAIDWAARGDELISIDLVTGEMRRRFGLKFSNTVRPFLARMLRDRRPSLRAKIEVTTTSRGKNRNLKVAIDHLNVVAVIHRAADGSEQRIELADVPAVVDRIKSAQKQNERRKSPRPPASSGTGGDG
Ga0318502_102351941	3300031747	Soil	LISIDLVTGEMRRRFGLKFSNTVRPFLARMLRDRRPSLRAKIEVTTTSRGRNRNVKVAIDHLNVVAVIHRAADGSEQRIELAEVPAVVERIKAAQKQIKRPKSTPPPK
Ga0318526_103003351	3300031769	Soil	ETLYPAAETVANEWAARGDELISIDLVTGEMRRRFGLKFSNTVRPFLARMLRDRRPSLRAKIEVTTTSRGKNRNVKVAIDHLNVVAVIHRAADGREERIELADVPAVVDRIKIAQKQLKRSKPTPALK
Ga0318521_100839522	3300031770	Soil	MADLEALYPAAETVAVAWAARGDELISIDLVTGEMRRRFGLKFSNTVRPFLARMLRDRRPSLRAKIEVTTTSRGKNRNVKVAIDHLNVVAVIHRAADGREERIELADVPAVVDRIKIAQKQLKRSKPTPALK
Ga0318552_101770272	3300031782	Soil	IDLVTGEMRRRFGLKFSNTVRPFLARMLRDRRPSLRAKIEVTTTSRGKNRNVKVAIDHLNVVAVIHRAADGREERIELADVPAVVDRIKIAQKQLKRSKPTPALK
Ga0318565_100309423	3300031799	Soil	DQLVAVAWAARGDELISIDLVTGEMRRRFGLKFSNTVRPFLARMLRDRRPSLRAKIEVTTTSRGKNRNVKVAIDHLNVVAVIHRAADGREERIELADVPAVVDRIKIAQKQLKRSKPTPALK
Ga0318564_100257981	3300031831	Soil	KFSNTVRPFLARMLRDRRPSLRAKIEVTTTSRGKNRNVKVAIDHLNVVAVIHRAADGREERIELADVPAVVDRIKIAQKQLKRSKPTPALK
Ga0306919_111009111	3300031879	Soil	YPAAETVAAEWDERGDELISIDLVTGEMRRRFGLKFSNTVRPFLARMLRDRRPSLREKIEVNTTSRGKNRNVKVAIDHLNVVAVIHRAADGSEQRIELAEVPAVVERIKAAQKQIKRPKSTPPPK
Ga0306925_103668251	3300031890	Soil	ETVATEWDDRGDQLISIDLVTGEMRRRFGLKFSNTVRPFLARMLRDRRPSLRAKIEVTTTSRGRNRNVKVAIDHLNVVAVIHRAADGSEQRIELAAVPAVVERIKAAQKQVKRPKSTPPP
Ga0306925_109870462	3300031890	Soil	DLVTGEMRRRFGLKFSNTVRPFLARMLRDRRPSLRAKIEVTTTSRGKNRNVKVAIDHLNVVAVIHRAADGREERIELADVPAVVDRIKIAQKQLKRSKPTPALK
Ga0318551_100329063	3300031896	Soil	TVAVAWAARGDELISIDLVTGEMRRRFGLKFSNTVRPFLARMLRDRRPSLRAKIEVTTTSRGKNRNVKVAIDHLNVVAVIHRAADGREERIELADVPAVVDRIKIAQKQLKRSKPTPALK
Ga0310916_109522161	3300031942	Soil	MRRRFGLKFSNTVRPFLARMLRDRRPSLRAKIEVTTTSRGKNRNVKVAIDHLNVVAVIHRAADGREERIELADVPAVVDRIKIAQKQLKRSKPTPALK
Ga0306922_121445461	3300032001	Soil	DRGDQLISIDLVTGEMRRRFGLKFSNTVRPFLARMLRDRRPSLRAKIEVTTTSRGRNRNVKVAIDHLNVVAVIHRAADGSEQRIELAEVPAVVERIKAAQKQIKRPKSTPPPK
Ga0318549_100648202	3300032041	Soil	AARGDELISIDLVTGEMRRRFGLKFSNTVRPFLARMLRDRRPSLRAKIEVTTTSRGKNRNVKVAIDHLNVVAVIHRAADGREERIELADVPAVVDRIKIAQKQLKRSKPTPALK
Ga0308173_103626333	3300032074	Soil	RFHLRFSNTVRPFLARMLRDRRPGLRPKIDVTTTSRGRNRNIKVAIDHLDVVAVIHRTPDGGEQRIELAEIPAVVERLKAAQKRARRPDAAPRASREPSASSRDPRGPAPHSE
Ga0308173_123561621	3300032074	Soil	FKMADLEELYPAAESVAIEWAARGDELISIDLVTGEMRRRFGLKFSNTVRPFLARMLRDRRPLLRDKIEVTTTSRGKNRHVKVAIDHLNVIAVIHRAADGTEQRIELADVPAVVARIKAEQAQRKRANSTEPPK
Ga0318518_105091641	3300032090	Soil	PRDGDELISIDLVTGEMRRRFGLKFSNTVRPFLARMLRDRRPSLRAKIEVTTTSRGKNRNVKVAIDHLNVVAVIHRAADGREERIELADVPAVVDRIMIAQKQLKRSKPTPALK
Ga0310895_102921461	3300032122	Soil	DLVTGEMRRRFGLKFSNTVRPFLARMLRDRRPSLRAKIEVTTTSRGKNRNVKVAIDHLNVVAVIHRAADGTEQRIELADVPAVVERIKAAQKAARPKAARPPTPF
Ga0310889_106077712	3300032179	Soil	KMADLEALYPSAETVALQWAARGDELISIDLVTGEMRRRFHLKFSNTVRPFLARMLRDRRPELRAKIEVTTTSRGKNRNVKVAIDHLDVVAVIHRAADGTEQRVAVADIPGVVEQLKAAQKQSKRAKPVP
Ga0335069_113897531	3300032893	Soil	DELISIDLVTGEMRRRFGLKFSNTVRPFLARMLRDRRPSLRAKIEVTTTSRGKNRNLKVAIDHLNVVAVIHRSADGSEQRIELADVPAVVERIKAAQKQKERRKPITPGSDPPATSSGTA
Ga0310810_114879091	3300033412	Soil	PAAETVAMEWAGRGDELISIDLVTGEMRRRFGLKFSNTVRPFLARMLRDRRPSLRAKIEVTTTSRGKNRNVKIAIDHLNVVAVIHRASDGTEQRIELADVPAVVERIKSAQKHNERRKLTKPAE
Ga0370494_090553_469_771	3300034130	Untreated Peat Soil	RFSNTVRPFLARMLRDRRPGLRSKIEVTTTSRGRNRNIKVAIDHLDVVAVIHRTPEGAEQRIDLADIPAVVERLKAAQKRTKRSDPSASAEREPSMKSAT
Ga0372943_1123217_1_393	3300034268	Soil	DLDALYPAAEAIAAEWAARGDELISIDLVTGEMRRRFGLKFSNTVRPFLARMLRDRRPTLRTKIEVATTSRGKNRNVKVAIDHLNVVAVIHRTADGTEQRIELADVPAAVERMKAAQKPLPRRKAATATE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F074072

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences