Metagenome / Metatranscriptome Family F074020

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F074020
Family Type	Metagenome / Metatranscriptome
Number of Sequences	120
Average Sequence Length	59 residues
Representative Sequence	MKQMLCSSCGYPVNKDKDRIVVSTFTGATKRVRWYCPKDCGNGGMKGILGKARQLLRMG
Number of Associated Samples	68
Number of Associated Scaffolds	120

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	72.50 %
% of genes near scaffold ends (potentially truncated)	36.67 %
% of genes from short scaffolds (< 2000 bps)	93.33 %
Associated GOLD sequencing projects	51
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.40

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (59.167 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean (56.667 % of family members)
Environment Ontology (ENVO)	Unclassified (90.833 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (90.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 16.09% β-sheet: 18.39% Coil/Unstructured: 65.52%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.40
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.40
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 120 Family Scaffolds
PF12728	HTH_17	12.50
PF02592	Vut_1	3.33
PF13481	AAA_25	2.50
PF05866	RusA	0.83

COG ID	Name	Functional Category	% Frequency in 120 Family Scaffolds
COG1738	Queuosine precursor transporter YhhQ, DUF165 family	Translation, ribosomal structure and biogenesis [J]	3.33
COG4570	Holliday junction resolvase RusA (prophage-encoded endonuclease)	Replication, recombination and repair [L]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.17 %
All Organisms	root	All Organisms	40.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.17 %
cellular organisms	root	All Organisms → cellular organisms	28.33 %
Viruses	superkingdom	All Organisms → Viruses	12.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.17 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	28.33 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	12.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.17 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	12.50 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	11.67 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	10.83 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.17 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	12.50 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	11.67 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	10.83 %
Acidithiobacillia	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Acidithiobacillia	0.83 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.17 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	12.50 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	11.67 %
Dehalococcoidia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia	9.17 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.83 %
Acidithiobacillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Acidithiobacillia → Acidithiobacillales	0.83 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.17 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	12.50 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	11.67 %
unclassified Dehalococcoidia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia	2.50 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.83 %
Acidithiobacillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Acidithiobacillia → Acidithiobacillales → Acidithiobacillaceae	0.83 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.17 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	12.50 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	11.67 %
Dehalococcoidia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	2.50 %
Acidithiobacillus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Acidithiobacillia → Acidithiobacillales → Acidithiobacillaceae → Acidithiobacillus	0.83 %
Sinorhizobium/Ensifer group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group	0.83 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.17 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	12.50 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	11.67 %
Dehalococcoidia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	2.50 %
Sinorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Sinorhizobium	0.83 %
unclassified Acidithiobacillus	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Acidithiobacillia → Acidithiobacillales → Acidithiobacillaceae → Acidithiobacillus → unclassified Acidithiobacillus	0.83 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.17 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	12.50 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	11.67 %
Dehalococcoidia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	2.50 %
Acidithiobacillus sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Acidithiobacillia → Acidithiobacillales → Acidithiobacillaceae → Acidithiobacillus → unclassified Acidithiobacillus → Acidithiobacillus sp.	0.83 %
Sinorhizobium meliloti	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Sinorhizobium → Sinorhizobium meliloti	0.83 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001724\|JGI24662J20072_1010381	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	934	Open in IMG/M
3300001726\|JGI24653J20064_1008279	Not Available	909	Open in IMG/M
3300001726\|JGI24653J20064_1020340	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia	536	Open in IMG/M
3300001727\|JGI24529J20061_105098	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia	653	Open in IMG/M
3300001730\|JGI24660J20065_1014461	Not Available	774	Open in IMG/M
3300001732\|JGI24652J20063_1016628	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	827	Open in IMG/M
3300001738\|JGI24657J20077_1040330	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia	512	Open in IMG/M
3300002760\|JGI25136J39404_1115930	Not Available	507	Open in IMG/M
3300003690\|PicViral_1004237	All Organisms → Viruses → Predicted Viral	3649	Open in IMG/M
3300006076\|Ga0081592_1029890	All Organisms → Viruses → Predicted Viral	2752	Open in IMG/M
3300006076\|Ga0081592_1046979	Not Available	2005	Open in IMG/M
3300006076\|Ga0081592_1078800	Not Available	1376	Open in IMG/M
3300006076\|Ga0081592_1177858	Not Available	718	Open in IMG/M
3300006076\|Ga0081592_1200503	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	643	Open in IMG/M
3300006164\|Ga0075441_10374990	Not Available	516	Open in IMG/M
3300006352\|Ga0075448_10073441	Not Available	1083	Open in IMG/M
3300006654\|Ga0101728_107595	Not Available	7762	Open in IMG/M
3300006736\|Ga0098033_1036771	All Organisms → Viruses → Predicted Viral	1466	Open in IMG/M
3300006736\|Ga0098033_1086755	Not Available	895	Open in IMG/M
3300006753\|Ga0098039_1043888	Not Available	1574	Open in IMG/M
3300006754\|Ga0098044_1202322	Not Available	780	Open in IMG/M
3300006947\|Ga0075444_10341451	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	571	Open in IMG/M
3300008050\|Ga0098052_1398736	Not Available	511	Open in IMG/M
3300008216\|Ga0114898_1008611	All Organisms → Viruses → Predicted Viral	4107	Open in IMG/M
3300008216\|Ga0114898_1075061	All Organisms → Viruses → Predicted Viral	1039	Open in IMG/M
3300008216\|Ga0114898_1101330	Not Available	861	Open in IMG/M
3300008216\|Ga0114898_1229450	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	504	Open in IMG/M
3300008217\|Ga0114899_1088114	Not Available	1057	Open in IMG/M
3300008217\|Ga0114899_1109727	Not Available	923	Open in IMG/M
3300008217\|Ga0114899_1132875	Not Available	819	Open in IMG/M
3300008220\|Ga0114910_1185279	Not Available	579	Open in IMG/M
3300009412\|Ga0114903_1069512	Not Available	801	Open in IMG/M
3300009413\|Ga0114902_1028032	All Organisms → cellular organisms → Bacteria	1753	Open in IMG/M
3300009413\|Ga0114902_1040010	All Organisms → Viruses → Predicted Viral	1404	Open in IMG/M
3300009413\|Ga0114902_1105925	Not Available	745	Open in IMG/M
3300009413\|Ga0114902_1139889	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia	621	Open in IMG/M
3300009414\|Ga0114909_1035275	All Organisms → cellular organisms → Bacteria	1540	Open in IMG/M
3300009414\|Ga0114909_1105993	Not Available	767	Open in IMG/M
3300009414\|Ga0114909_1111334	Not Available	744	Open in IMG/M
3300009418\|Ga0114908_1058446	All Organisms → cellular organisms → Bacteria	1363	Open in IMG/M
3300009595\|Ga0105214_109193	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	677	Open in IMG/M
3300009602\|Ga0114900_1100244	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia	796	Open in IMG/M
3300009602\|Ga0114900_1138662	Not Available	638	Open in IMG/M
3300009603\|Ga0114911_1030677	Not Available	1747	Open in IMG/M
3300009603\|Ga0114911_1164827	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	617	Open in IMG/M
3300009603\|Ga0114911_1169126	Not Available	607	Open in IMG/M
3300009604\|Ga0114901_1143332	Not Available	721	Open in IMG/M
3300009620\|Ga0114912_1096888	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	710	Open in IMG/M
3300009622\|Ga0105173_1033919	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia	819	Open in IMG/M
3300009622\|Ga0105173_1042902	Not Available	747	Open in IMG/M
3300009622\|Ga0105173_1056067	Not Available	672	Open in IMG/M
3300009622\|Ga0105173_1073936	Not Available	601	Open in IMG/M
3300009622\|Ga0105173_1075897	Not Available	595	Open in IMG/M
3300009791\|Ga0105235_119095	Not Available	743	Open in IMG/M
3300017775\|Ga0181432_1006354	All Organisms → Viruses → Predicted Viral	2760	Open in IMG/M
3300017775\|Ga0181432_1024499	All Organisms → Viruses → Predicted Viral	1582	Open in IMG/M
3300017775\|Ga0181432_1153919	Not Available	708	Open in IMG/M
3300021973\|Ga0232635_1103615	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	675	Open in IMG/M
3300021973\|Ga0232635_1150928	Not Available	572	Open in IMG/M
3300021973\|Ga0232635_1170488	Not Available	542	Open in IMG/M
3300021977\|Ga0232639_1400448	Not Available	531	Open in IMG/M
3300023500\|Ga0257021_1075203	Not Available	791	Open in IMG/M
3300025043\|Ga0207907_127168	Not Available	517	Open in IMG/M
3300025045\|Ga0207901_1030449	Not Available	732	Open in IMG/M
3300025046\|Ga0207902_1005995	All Organisms → Viruses → Predicted Viral	1213	Open in IMG/M
3300025049\|Ga0207898_1004135	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1677	Open in IMG/M
3300025049\|Ga0207898_1006306	All Organisms → cellular organisms → Bacteria → Proteobacteria → Acidithiobacillia → Acidithiobacillales → Acidithiobacillaceae → Acidithiobacillus → unclassified Acidithiobacillus → Acidithiobacillus sp.	1409	Open in IMG/M
3300025049\|Ga0207898_1010374	Not Available	1145	Open in IMG/M
3300025049\|Ga0207898_1019586	Not Available	857	Open in IMG/M
3300025069\|Ga0207887_1040653	Not Available	755	Open in IMG/M
3300025069\|Ga0207887_1052779	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	663	Open in IMG/M
3300025082\|Ga0208156_1046193	Not Available	886	Open in IMG/M
3300025125\|Ga0209644_1106249	Not Available	665	Open in IMG/M
3300025133\|Ga0208299_1243316	Not Available	510	Open in IMG/M
3300025218\|Ga0207882_1047797	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia	594	Open in IMG/M
3300025218\|Ga0207882_1059796	Not Available	516	Open in IMG/M
3300025241\|Ga0207893_1055387	Not Available	570	Open in IMG/M
3300025241\|Ga0207893_1061208	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	542	Open in IMG/M
3300025244\|Ga0207908_1007099	All Organisms → cellular organisms → Bacteria	1685	Open in IMG/M
3300025244\|Ga0207908_1010476	Not Available	1327	Open in IMG/M
3300025244\|Ga0207908_1030430	All Organisms → cellular organisms → Bacteria	693	Open in IMG/M
3300025244\|Ga0207908_1030513	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	692	Open in IMG/M
3300025247\|Ga0207880_1007220	All Organisms → Viruses → Predicted Viral	1903	Open in IMG/M
3300025251\|Ga0208182_1055441	Not Available	807	Open in IMG/M
3300025257\|Ga0207899_1037289	Not Available	815	Open in IMG/M
3300025257\|Ga0207899_1037730	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	808	Open in IMG/M
3300025259\|Ga0207876_1021358	Not Available	967	Open in IMG/M
3300025264\|Ga0208029_1056885	Not Available	801	Open in IMG/M
3300025264\|Ga0208029_1075264	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	651	Open in IMG/M
3300025267\|Ga0208179_1009616	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	3201	Open in IMG/M
3300025267\|Ga0208179_1037865	Not Available	1156	Open in IMG/M
3300025267\|Ga0208179_1111752	Not Available	527	Open in IMG/M
3300025270\|Ga0208813_1021988	All Organisms → Viruses → Predicted Viral	1590	Open in IMG/M
3300025270\|Ga0208813_1046650	Not Available	967	Open in IMG/M
3300025274\|Ga0208183_1025315	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1311	Open in IMG/M
3300025274\|Ga0208183_1082559	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	602	Open in IMG/M
3300025277\|Ga0208180_1008065	Not Available	3632	Open in IMG/M
3300025277\|Ga0208180_1021356	Not Available	1939	Open in IMG/M
3300025277\|Ga0208180_1077989	Not Available	778	Open in IMG/M
3300025280\|Ga0208449_1051183	All Organisms → Viruses → Predicted Viral	1107	Open in IMG/M
3300025280\|Ga0208449_1063180	Not Available	955	Open in IMG/M
3300025281\|Ga0207881_1027475	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Sinorhizobium → Sinorhizobium meliloti	966	Open in IMG/M
3300025281\|Ga0207881_1028830	Not Available	939	Open in IMG/M
3300025281\|Ga0207881_1064695	Not Available	571	Open in IMG/M
3300025287\|Ga0207903_1040283	Not Available	850	Open in IMG/M
3300025287\|Ga0207903_1044063	Not Available	806	Open in IMG/M
3300025293\|Ga0208934_1064486	Not Available	650	Open in IMG/M
3300025296\|Ga0208316_1069240	Not Available	685	Open in IMG/M
3300025300\|Ga0208181_1023329	Not Available	1469	Open in IMG/M
3300025300\|Ga0208181_1085823	Not Available	612	Open in IMG/M
3300025300\|Ga0208181_1104953	Not Available	539	Open in IMG/M
3300025305\|Ga0208684_1124769	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	623	Open in IMG/M
3300026117\|Ga0208317_1013972	Not Available	522	Open in IMG/M
3300028018\|Ga0256381_1018559	Not Available	1141	Open in IMG/M
3300032132\|Ga0315336_1094928	All Organisms → Viruses → Predicted Viral	1313	Open in IMG/M
3300032132\|Ga0315336_1100860	All Organisms → Viruses → Predicted Viral	1252	Open in IMG/M
3300032132\|Ga0315336_1101773	All Organisms → Viruses → Predicted Viral	1243	Open in IMG/M
3300032145\|Ga0315304_1206033	Not Available	516	Open in IMG/M
3300034629\|Ga0326756_038751	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia	582	Open in IMG/M
3300034654\|Ga0326741_060832	Not Available	632	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	80.83%
Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents	9.17%
Unclassified	Environmental → Aquatic → Marine → Unclassified	4.17%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	2.50%
Strait	Environmental → Aquatic → Marine → Strait	2.50%
Pelagic	Environmental → Aquatic → Marine → Pelagic	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	80.00%
Diffuse Flow	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow	7.50%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	4.17%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	2.50%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	2.50%
Abyssal Plane	Environmental → Aquatic → Marine → Oceanic → Abyssal Plane	0.83%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	0.83%
Microbial Mats	Environmental → Aquatic → Marine → Hydrothermal Vents → Microbial Mats	0.83%
Black Smokers	Environmental → Aquatic → Marine → Hydrothermal Vents → Black Smokers	0.83%

Habitat	Taxonomy	Distribution
Deep Ocean	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean	56.67%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	16.67%
Marine Oceanic	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine Oceanic	6.67%
Diffuse Hydrothermal Fluids	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Diffuse Hydrothermal Fluids	4.17%
Hydrothermal Vent Fluids	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Hydrothermal Vent Fluids	3.33%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	2.50%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	2.50%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	2.50%
Filtered Seawater	Environmental → Aquatic → Marine → Unclassified → Unclassified → Filtered Seawater	1.67%
Marine	Environmental → Aquatic → Marine → Oceanic → Abyssal Plane → Marine	0.83%
Seawater	Environmental → Aquatic → Marine → Pelagic → Unclassified → Seawater	0.83%
Marine	Environmental → Aquatic → Marine → Hydrothermal Vents → Microbial Mats → Marine	0.83%
Marine, Hydrothermal Vent Plume	Environmental → Aquatic → Marine → Hydrothermal Vents → Black Smokers → Marine, Hydrothermal Vent Plume	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001724	Marine viral communities from the Deep Pacific Ocean - MSP-146	Environmental	Open in IMG/M
3300001726	Marine viral communities from the Deep Pacific Ocean - MSP-103	Environmental	Open in IMG/M
3300001727	Marine viral communities from the Pacific Ocean - LP-55	Environmental	Open in IMG/M
3300001730	Marine viral communities from the Deep Pacific Ocean - MSP-134	Environmental	Open in IMG/M
3300001732	Marine viral communities from the Deep Pacific Ocean - MSP-97	Environmental	Open in IMG/M
3300001738	Marine viral communities from the Deep Pacific Ocean - MSP-118	Environmental	Open in IMG/M
3300002760	Marine viral communities from the Pacific Ocean - ETNP_6_1000	Environmental	Open in IMG/M
3300003690	Hydrothermal vent plume microbial communities from the Mid Cayman Rise - Piccard2013-Plume - Viral/microbial metagenome assembly	Environmental	Open in IMG/M
3300006076	Microbial communities in diffuse hydrothermal fluids of Manus Basin, Bismarck Sea ? fluid A	Environmental	Open in IMG/M
3300006164	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG002-DNA	Environmental	Open in IMG/M
3300006352	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG108-DNA	Environmental	Open in IMG/M
3300006654	Combined Assembly of Gp0125100, Gp0113270, Gp0125099	Environmental	Open in IMG/M
3300006736	Marine viral communities from the Subarctic Pacific Ocean - 1_ETSP_OMZ_AT15124 metaG	Environmental	Open in IMG/M
3300006753	Marine viral communities from the Subarctic Pacific Ocean - 6_ETSP_OMZ_AT15160 metaG	Environmental	Open in IMG/M
3300006754	Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaG	Environmental	Open in IMG/M
3300006947	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG017-DNA	Environmental	Open in IMG/M
3300008050	Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaG	Environmental	Open in IMG/M
3300008216	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_Geostar	Environmental	Open in IMG/M
3300008217	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_215	Environmental	Open in IMG/M
3300008220	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_908	Environmental	Open in IMG/M
3300009412	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s2	Environmental	Open in IMG/M
3300009413	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s12	Environmental	Open in IMG/M
3300009414	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_906	Environmental	Open in IMG/M
3300009418	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s17	Environmental	Open in IMG/M
3300009595	Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3635_2500	Environmental	Open in IMG/M
3300009602	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_231	Environmental	Open in IMG/M
3300009603	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_904	Environmental	Open in IMG/M
3300009604	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s16	Environmental	Open in IMG/M
3300009620	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_51	Environmental	Open in IMG/M
3300009622	Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3321_4155	Environmental	Open in IMG/M
3300009791	Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3819_2500	Environmental	Open in IMG/M
3300017775	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 55 SPOT_SRF_2014-07-17	Environmental	Open in IMG/M
3300021973	Hydrothermal fluids microbial communities from Mariana Back-Arc Basin vent fields, Pacific Ocean - Alice_FS923 _150kmer	Environmental	Open in IMG/M
3300021977	Hydrothermal fluids microbial communities from Mariana Back-Arc Basin vent fields, Pacific Ocean - Hafa_FS925 _150kmer	Environmental	Open in IMG/M
3300023500	Marine microbial mat from Loihi Seamount, Hawaii, USA - Marker 39_BS4 Individual Assembly	Environmental	Open in IMG/M
3300025043	Marine viral communities from the Subarctic Pacific Ocean - LP-52 (SPAdes)	Environmental	Open in IMG/M
3300025045	Marine viral communities from the Pacific Ocean - LP-46 (SPAdes)	Environmental	Open in IMG/M
3300025046	Marine viral communities from the Pacific Ocean - LP-45 (SPAdes)	Environmental	Open in IMG/M
3300025049	Marine viral communities from the Pacific Ocean - LP-55 (SPAdes)	Environmental	Open in IMG/M
3300025069	Marine viral communities from the Pacific Ocean - LP-38 (SPAdes)	Environmental	Open in IMG/M
3300025082	Marine viral communities from the Subarctic Pacific Ocean - 1_ETSP_OMZ_AT15124 metaG (SPAdes)	Environmental	Open in IMG/M
3300025125	Marine viral communities from the Pacific Ocean - ETNP_2_1000 (SPAdes)	Environmental	Open in IMG/M
3300025133	Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaG (SPAdes)	Environmental	Open in IMG/M
3300025218	Marine viral communities from the Deep Pacific Ocean - MSP-103 (SPAdes)	Environmental	Open in IMG/M
3300025241	Marine viral communities from the Deep Pacific Ocean - MSP-121 (SPAdes)	Environmental	Open in IMG/M
3300025244	Marine viral communities from the Deep Pacific Ocean - MSP-81 (SPAdes)	Environmental	Open in IMG/M
3300025247	Marine viral communities from the Deep Pacific Ocean - MSP-91 (SPAdes)	Environmental	Open in IMG/M
3300025251	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_906 (SPAdes)	Environmental	Open in IMG/M
3300025257	Marine viral communities from the Deep Pacific Ocean - MSP-134 (SPAdes)	Environmental	Open in IMG/M
3300025259	Marine viral communities from the Deep Pacific Ocean - MSP-146 (SPAdes)	Environmental	Open in IMG/M
3300025264	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s12 (SPAdes)	Environmental	Open in IMG/M
3300025267	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_Geostar (SPAdes)	Environmental	Open in IMG/M
3300025270	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_904 (SPAdes)	Environmental	Open in IMG/M
3300025274	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_51 (SPAdes)	Environmental	Open in IMG/M
3300025277	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s16 (SPAdes)	Environmental	Open in IMG/M
3300025280	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s17 (SPAdes)	Environmental	Open in IMG/M
3300025281	Marine viral communities from the Deep Pacific Ocean - MSP-97 (SPAdes)	Environmental	Open in IMG/M
3300025287	Marine viral communities from the Deep Pacific Ocean - MSP-131 (SPAdes)	Environmental	Open in IMG/M
3300025293	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s2 (SPAdes)	Environmental	Open in IMG/M
3300025296	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_231 (SPAdes)	Environmental	Open in IMG/M
3300025300	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s6 (SPAdes)	Environmental	Open in IMG/M
3300025305	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_b05 (SPAdes)	Environmental	Open in IMG/M
3300026117	Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3635_2500 (SPAdes)	Environmental	Open in IMG/M
3300028018	Seawater viral communities from deep brine pools at the bottom of the Mediterranean Sea - LS1 1600m	Environmental	Open in IMG/M
3300032132	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - ASW #5	Environmental	Open in IMG/M
3300032145	Metatranscriptome of marine microbial communities from Western Arctic Ocean, Canada - CBN3_1000m_313 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034629	Seawater viral communities from Mid-Atlantic Ridge, Atlantic Ocean - 543_2600	Environmental	Open in IMG/M
3300034654	Seawater viral communities from Mid-Atlantic Ridge, Atlantic Ocean - 487_2244	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI24662J20072_10103813	3300001724	Deep Ocean	MKTMLCGNCGHPVNREKDRIVVSTFSGTTKRVRWYCPKDCGNGGMKGILGKARQLLRMG*
JGI24653J20064_10082794	3300001726	Deep Ocean	MKQMLCSSCGYPMDKDKDRIVVSTFTGNTKRVRWYCPKDCGNGGMKGILGKARQLLRMG*
JGI24653J20064_10203401	3300001726	Deep Ocean	EGAMKTMLCAHCGHPVNKDKDRIVVSTFTGITKNVRWYCPQDCGNGGMKGVLKKARQLLRVG*
JGI24529J20061_1050983	3300001727	Marine	VNKDTDRIVVSTFTGVTKNVRWYCPQDCGNGGMKGVLKKARQLLRVG*
JGI24660J20065_10144611	3300001730	Deep Ocean	MKQMLCSSCQRPVNKDKDRIVVTTFSGVTRKVRWYCPXXCGNGGMKGILGKARQLLRMG*
JGI24652J20063_10166282	3300001732	Deep Ocean	MKTMLCGNCGHPVNKDKDRIVVSTFSGATKRVRWYCPKDCGNGGMKGILGKARQLLRMGXLCPTSIIG*
JGI24657J20077_10403301	3300001738	Deep Ocean	PVNKDKDRIVVSTFTGVTKNVRWYCPQDCGNGGMKGVLKKARQLLRVG*
JGI25136J39404_11159301	3300002760	Marine	PVNKDQDRIVVSTFTGVTHNVRWYCPADCGNGGLKGIVKKARQLLRVG*
PicViral_10042377	3300003690	Marine, Hydrothermal Vent Plume	MKQMLCSSCQRPVNKDKDRIVVSTFTGVTKNVRWYCPQDCGNGGVKGILKKARQLLRVG*
Ga0081592_10298902	3300006076	Diffuse Hydrothermal Fluids	MKTMLCSSCGYPVNKDKDRIVVSTFTGVTKNVRWYCPQDCGNGGVKGILKKARQLLRVG*
Ga0081592_10469794	3300006076	Diffuse Hydrothermal Fluids	MKQMLCSSCGYPMDKDKDRIVVSTFTGATKRVRWYCPKDCGNGGMKGILGKARQLLRMG*
Ga0081592_10788003	3300006076	Diffuse Hydrothermal Fluids	MKQMLCNHCQRPVNKDKDRIVVTTFSGLTKNVRWYCPTNCGNGGLKGILGKTRKLLRMG*
Ga0081592_11778583	3300006076	Diffuse Hydrothermal Fluids	MKTMLCGNCGHPVNKETDRIVVSTFTGATKRVRWYCPKDCGNGGMKGILGKARQ
Ga0081592_12005031	3300006076	Diffuse Hydrothermal Fluids	MKQMLCGNCGHPVNKDQDRIVVSTFTGATKRVRWYCPKDCGNGGMKGILGKARQ
Ga0075441_103749902	3300006164	Marine	MKQMLCGNCGHPVNREKDRIVVSTFSGATKRVRWYCPKDCGNGGMKGILGKARQLLRMG*
Ga0075448_100734413	3300006352	Marine	MKQMLCSSCGYPMDKDKDRIVVSTFSGATKRVRWYCPKDCGNGGMKGVLKKARQLLRMG*
Ga0101728_10759517	3300006654	Marine	MKTMLCGNCGHPVNKETDRIVVSTFTGITKNVRWYCPQDCGNGGVKGIVKKARQLLRVG*
Ga0098033_10367714	3300006736	Marine	MKQMLCVSCQRPVNRDKDRIIITTFCGGEKRTWWYCPTDCGSGGVKGILGKARRF
Ga0098033_10867552	3300006736	Marine	MKQMLCGSCQRPVNKDKDRIVVTTFIGVTKNVRWYCTKDCGSGGLKGILGKTRKLLRMG*
Ga0098039_10438884	3300006753	Marine	MKQMLCGSCQRPVNKDKDRIVVTTFIGVTKNVRWYCPTNCGSGGLKGILGKTRKLLRMG*
Ga0098044_12023223	3300006754	Marine	MKQMLCGSCQRPVNKDKDRIVVTTFSGLTKNVRWYCPTNCGNGGLKGILGKTRKLLRMG*
Ga0075444_103414513	3300006947	Marine	MKQMLCSSCGYPMDKDKDRIVVSTFTGSTKRVRWYCPKDCGNGGMKGILGKARQLLRMG*
Ga0098052_13987362	3300008050	Marine	MKQMLCNHCQRPVNKDKDRIVVTTFTGITKNVRWYCPTNCGSGGLKGILGKTRKLLRMG*
Ga0114898_10086113	3300008216	Deep Ocean	MKQMLCSNCQRPVSRDKDRIVVSTFTGLTKNVRWYCPTNCGSGGLKGILGKARRFLKAG*
Ga0114898_10750613	3300008216	Deep Ocean	MKQMLCGSCQRPVNKDKDRIVVTTFSGLTKNVRWYCPTDCGSGGLKGILGKTRKLLRMG*
Ga0114898_11013302	3300008216	Deep Ocean	MSDAMIKEGVMKQMLCNHCQRPVNKDKDRIVVTTFSGLTKNVRWYCPTNCGNGGLKGILGKTRKLLRMG*
Ga0114898_12294501	3300008216	Deep Ocean	VNKDKDRIVVTTFTGITKNVRWYCPTNCGSGGLKGILGKTRKLLRMG*
Ga0114899_10881142	3300008217	Deep Ocean	MKQMLCGSCQRPVNKDKDRIVVTTFSGLTKNVRWYCPKDCGNGGMKGILGKTRKLLRMG*
Ga0114899_11097274	3300008217	Deep Ocean	MSDATIKEGVMKQMLCNHCQRPVNKDKDRIVVTTFSGLTKNVRWYCPTNCGNGGLKGILGKTRKLLRMG*
Ga0114899_11328753	3300008217	Deep Ocean	MKQMLCGSCQRPVNKDKDRIVVTTFTGITKNVRWYCPTDCGSGGLKGILGKTRKLLRMG*
Ga0114910_11852791	3300008220	Deep Ocean	VNKDKDRIVVTTFTGITKNVRWYCPTDCGSGGLKGILGKTRKLLRMG*
Ga0114903_10695123	3300009412	Deep Ocean	NKEGVMKTMLCSSCGYPMDKDKDRIVVSTFTGSTKRVRWYCGNFSCCAPVPISSGPKGILGKARQLLRMG*
Ga0114902_10280322	3300009413	Deep Ocean	MKQMLCSSCGYPVNKDKDRIVVSTFTGATKRVRWYCPKDCGNGGMKGILGKARQLLRMG*
Ga0114902_10400104	3300009413	Deep Ocean	MKQMLCNHCQRPVNKDKDRIVVTTFTGITKNVRWYCPTDCGSGGLKGILGKTRKLLRMG*
Ga0114902_11059252	3300009413	Deep Ocean	MKQMLCNHCQRPVNKDQDRIVVTTFSGLTKNVRWYCLTNCGNGGLKGILGKTRKLLGIG*
Ga0114902_11398892	3300009413	Deep Ocean	KDKDRIVVTTFSGLTKNVRWYCPTNCGNGGLKGILGKTRKLLRMG*
Ga0114909_10352754	3300009414	Deep Ocean	MKQMLCGNCGHPVNKDKDRIVVSTFTGSTKRVRWYCPKDCGNGGMKGILGKARQLLRMG*
Ga0114909_11059931	3300009414	Deep Ocean	NKDKDRIVVSTFTGATKRVRWYCGNFSCCAPVPISSGPKGILGKARQLLRMG*
Ga0114909_11113342	3300009414	Deep Ocean	MSDATIKEGVMKQMLCNHCQRPVNRDKDRIVVTTFSGLTKNVRWYCPTNCGNGGLKGILGKTRKLLRMG*
Ga0114908_10584461	3300009418	Deep Ocean	LCSSCGYPVNKDKDRIVVSTFTGATKRVRWYCPKDCGNGGMKGILGKARQLLRMG*
Ga0105214_1091931	3300009595	Marine Oceanic	MKTMLCGNCGYPVNKDKDRIVVSTFTGDTKRVRWYCGNFSCCAPVPISSGPKGILGKARQLLRMG*
Ga0114900_11002442	3300009602	Deep Ocean	MKTMLCSSCGYPMDKDKDRIVVSTFTGSTKRVRWYCGNFSCCAPVPISSGPKGILGKARQLLRMG*
Ga0114900_11386623	3300009602	Deep Ocean	IVVTTFTGITKNVRWYCPTDCGSGGLKGILGKTRKLLRMG*
Ga0114911_10306771	3300009603	Deep Ocean	TIVKEGEMKQMLCNHCQRPVNKDKDRIVVTTFSGLTKNVRWYCPTNCGNGGLKGILGKTRKLLRMG*
Ga0114911_11648272	3300009603	Deep Ocean	MKQMLCGNCGYPVNKDKDRIVVSTFTGATKRVRWYCPKDCGNGGMKGIL
Ga0114911_11691261	3300009603	Deep Ocean	MKTMLCSSCGYPVNKDKDRIVVSTFTGATKRVRWYCPKDCGNGGMKGIL
Ga0114901_11433322	3300009604	Deep Ocean	MLCNHCQRPVNKDKDRIVVTTFSGLTKNVRWYCPTNCGNGGLKGILGKTRKLLRMG*
Ga0114912_10968881	3300009620	Deep Ocean	AMIKEGVMKQMLCNHCQRPVNKDKDRIVVTTFSELTKNVRWYCPTNCGNGGMKGILGKTRKLLRMG*
Ga0105173_10339194	3300009622	Marine Oceanic	GYPVNKDTDRIVVSTFTGITKNVRWYCPQDCGNGGMKGVLKKARQLLRVG*
Ga0105173_10429021	3300009622	Marine Oceanic	MIKKEGVMKTMLCSSCQRPVSRDKDRIVVSTFTGVTKKVRWYCPTNCGNGGLKGIL
Ga0105173_10560673	3300009622	Marine Oceanic	MIKEGVMKTMLCSSCQRPVNRDKDRIVVTTFSGVTRKVRWYCPTNCGNGGLMGILGKARKLLRMG*
Ga0105173_10739361	3300009622	Marine Oceanic	MKQMLCSSCGHPVNKDKDRIVVSTFSGATKHVRWYCPKDCGNGGMKGILGKARQLLRM
Ga0105173_10758972	3300009622	Marine Oceanic	MKQMLCGNCGHPVNKDTDRIVVSTFTGVTKSVRWYCPKDCGNGGMKGILGKARQLLRMG*
Ga0105235_1190951	3300009791	Marine Oceanic	VNKDKDRIVVTTFSGVTRKVRWYCPTNCGNGGMKGILGKARQLLRMG*
Ga0181432_10063544	3300017775	Seawater	MKQMLCSSCQRPVNKDKDRIVVSTFTGITKNVRWYCPKDCGSGGLKGILGKARRFLKAG
Ga0181432_10244991	3300017775	Seawater	PVNKDKDRIVVTTFSGLTKNVRWYCPTNCGNGGLKGILGKTRKLLRMG
Ga0181432_11539192	3300017775	Seawater	PVNKDKDRIVVTTFSGLTKNVRWYCPTDCGNGGLKGILGKTRKLLRMG
Ga0232635_11036152	3300021973	Hydrothermal Vent Fluids	MKTMLCGNCGHPVNREKDRIVVSTFSGTTKRVRWYCPKDCGNGGMKGVLKKARQLLRMG
Ga0232635_11509282	3300021973	Hydrothermal Vent Fluids	MKQMLCSSCGYPMDKDKDRIVVSTFTGNTKRVRWYCPKDCGNGGMTGSLGKARQLLRMG
Ga0232635_11704881	3300021973	Hydrothermal Vent Fluids	MKQMLCSSCGYPMDKDKDRIVVSTFTGATKRVRWYCPKDCGNGGMKGILGKARQLLRMG
Ga0232639_14004481	3300021977	Hydrothermal Vent Fluids	MKTMLCGNCGYPVNKDKDRIVVSTFSGNTKHVRWYCPKDCGNGGMKGILGKARQLLRMG
Ga0257021_10752032	3300023500	Marine	MKTMLCGNCGHPVNKDKDRIVVSTFTGVTKNVRWYCPQDCGNGGMKGVLKKARQLLRVG
Ga0207907_1271682	3300025043	Marine	MKQMLCSSCQRPVNKDKDRIVVSTFTGNTKRVRWYCPKDCGNGGMKGVLKKARQLLRMG
Ga0207901_10304493	3300025045	Marine	MKQMLCSSCGYPMDKDKDRIVVSTFTGSTKRVRWYCPKDCGNGGMKGVLKKARQLLRMG
Ga0207902_10059952	3300025046	Marine	MKTMLCSSCGYPVNKDTDRIVVSTFTGATKRVRWYCPKDCGNGGMKGVLKKARQLLRVG
Ga0207898_10041354	3300025049	Marine	MKQMLCSSCGYPMDKDKDRIVVSTFTGSTKRVRWYCPKDCGNGGMKGILGKARQLLRMG
Ga0207898_10063061	3300025049	Marine	MKQMLCSSCGYPMDKDKDRIVVSTFTGATKRVRWYCPKDCGNGGMKGILGKARQLIKRS
Ga0207898_10103744	3300025049	Marine	MKTMLCSSCGYPVNKDKDRIVVSTFTGVTKNVRWYCPQDCGNGGMKGVLKKARQLLRVG
Ga0207898_10195861	3300025049	Marine	MKQMLCNHCQRPVNKDKDRIVVTTFTGITKNVRWYCPTNCGNGGLKGILGKTRKLLRMG
Ga0207887_10406531	3300025069	Marine	TIVKEGEMKQMLCNHCQRPVNKDKDRIVVTTFTGITKNVRWYCPTNCGNGGLKGILGKTRKLLRMG
Ga0207887_10527793	3300025069	Marine	MKTMLCGNCGYPVNKDKDRIVVSTFTGNTKRVRWYCPKDCGNGGMKGVLKKARQLLRMG
Ga0208156_10461932	3300025082	Marine	MKQMLCGSCQRPVNKDKDRIVVTTFIGVTKNVRWYCTKDCGSGGLKGILGKTRKLLRMG
Ga0209644_11062492	3300025125	Marine	MKQMLCSSCQRPVNKDKDRIVVSTFTGLTKNVRWYCPTNCGNGGLKGILGKTRKLLRMG
Ga0208299_12433162	3300025133	Marine	MKQMLCGSCQRPVNKDKDRIVVTTFTGITKNVRWYCPTNCGSGGLKGILGKTRKLLRMG
Ga0207882_10477971	3300025218	Deep Ocean	VIQIEEGAMKTMLCAHCGHPVNKDKDRIVVSTFTGITKNVRWYCPQDCGNGGMKGVLKKARQLLRVG
Ga0207882_10597961	3300025218	Deep Ocean	MVKEGVMKTMLCGNCGHPVNKDKDRIVVSTFSGATKRVRWYCPKDCGNGGMKGILGKARQLLRMG
Ga0207893_10553871	3300025241	Deep Ocean	AMKTMLCAHCGHPVNKDQDRIVVSTFTGITKNVRWYCPQDCGNGGMKGILGKARQLLRMG
Ga0207893_10612081	3300025241	Deep Ocean	MKTMLCAHCGHPVNKDQDRIVVSTFTGITKNVRWYCPKDCGNGGMKGILGKARQLLR
Ga0207908_10070994	3300025244	Deep Ocean	QMLCSSCGYPVNKDKDRIVVSTFSGATKRVRWYCPKDCGNGGMKGILGKARQLLRMG
Ga0207908_10104762	3300025244	Deep Ocean	MKQMLCGNCGHPVNKDKDRIVVSTFTGSTKRVRWYCPKDCGNGGMKGILGKARQLLRMG
Ga0207908_10304302	3300025244	Deep Ocean	MKTMLCSSCGYPVNKDQDRIVVSTFTGVTKNVRWYCPKDCGNGGMKGVLKKARQLLRMG
Ga0207908_10305132	3300025244	Deep Ocean	MKQMLCSSCGYPMDKDKDRIVVSTFTGATKRVRWYCPTNCGNGGMKGILGKARQLLRMG
Ga0207880_10072204	3300025247	Deep Ocean	MKTMLCAHCGHPVNKDKDRIVVSTFTGITKNVRWYCPQDCGNGGMKGVLKKARQLLRVG
Ga0208182_10554411	3300025251	Deep Ocean	MKQMLCGSCQRPVNKDKDRIVVTTFSGLTKNVRWYCPTDCGSGGLKGILGKTRKLLRMG
Ga0207899_10372891	3300025257	Deep Ocean	MVKEGAMKTMLCSSCGYPVNKDKDRIVVSTFTGVTKNVRWYCPQDCGNGGMKGVLKKARQLLRVG
Ga0207899_10377302	3300025257	Deep Ocean	MKTMLCAHCGHPVNKDQDRIVVSTFTGITKNVRWYCPQDCGNGGMKGILGKARQLLRMG
Ga0207876_10213581	3300025259	Deep Ocean	MKTMLCSSCGYPMDKDKDRIVVSTFSGNTKRVRWYCPKDCGNGGMKGVLKKA
Ga0208029_10568851	3300025264	Deep Ocean	MKQMLCNHCQRPVNKDKDRIVVTTFSGLTKNVRWYCPTNCGNGGLKGILGKTRKLLRMG
Ga0208029_10752642	3300025264	Deep Ocean	MKTMLCSSCGYPVNKDKDRIVVSTFTGSTKRVRWYCPKDCGNGGMKGILGKARQLLRMG
Ga0208179_10096166	3300025267	Deep Ocean	MKQMLCGNCGHPVNKDKDRIVVSTFTGATKRVRWYCGNFSCCAPVPISSGPKGILGKARQLLRMG
Ga0208179_10378653	3300025267	Deep Ocean	MKQMLCSNCQRPVSRDKDRIVVSTFTGLTKNVRWYCPTNCGSGGLKGILGKARRFLKAG
Ga0208179_11117522	3300025267	Deep Ocean	MKTMLCSSCGYPMDKDKDRIVVSTFTGSTKRVRWYCGNFSCCAPVPISSGPKGILGKARQLLRMG
Ga0208813_10219884	3300025270	Deep Ocean	MKQMLCSSCGYPVNKDKDRIVVSTFTGSTKRVRWYCPKDCGNGGMKGILGKARQL
Ga0208813_10466503	3300025270	Deep Ocean	MKQMLCNHCQRPVNKDKDRIVVTTFSGLTKNVRWYCPTNCGNGGLKGI
Ga0208183_10253153	3300025274	Deep Ocean	MKQMLCGNCGHPVNKDKDRIVVSTFTGATKRVRWYCPKDCGNGGMKGILGKARQLLRMG
Ga0208183_10825591	3300025274	Deep Ocean	PVNKDKDRIVVTTFTGITKNVRWYCPTNCGNGGMKGILGKTRKLLRMG
Ga0208180_10080654	3300025277	Deep Ocean	MKQMLCSSCGYPVNKDKDRIVVSTFTGATKRVRWYCGNFSCCAPVPISSGPKGILGKARQLLRMG
Ga0208180_10213561	3300025277	Deep Ocean	MKQMLCSSCGYPVNKDKDRIVVSTFTGTTKRVRWYCPKDCGNGGMKGILGKARQLLRMG
Ga0208180_10779891	3300025277	Deep Ocean	GVMKQMLCGSCQRPVNKDKDRIVVTTFTGITKNVRWYCPTDCGSGGLKGILGKTRKLLRM
Ga0208449_10511833	3300025280	Deep Ocean	MKQMLCGSCQRPVNKDKDRIVVTTFTGITKNVRWYCPTDCGSGGLKGILGKTRKLLRMG
Ga0208449_10631804	3300025280	Deep Ocean	MSDATIKEGVMKQMLCNHCQRPVNKDKDRIVVTTFSGLTKNVRWYCPTNCGNGGLKGILGKTRKLLRMG
Ga0207881_10274753	3300025281	Deep Ocean	TMLCGNCGYPMDKDKDRIVVSTFTGSTKRVRWYCPKDCGNGGMKGVLKKARQLLRMG
Ga0207881_10288302	3300025281	Deep Ocean	MKTMLCSSCGYPVNKDKDRIVVSTFTGVTKNVRWYCPQDCGNGGVKGI
Ga0207881_10646952	3300025281	Deep Ocean	MKQMLCSSCGYPMDKDKDRIVVSTFTGSTKRVRWYCPKDCGNGGMKGVLK
Ga0207903_10402832	3300025287	Deep Ocean	MKQMLCSSCQRPVNKDKDRIVVSTFTGITKKVRWYCPKDCGSGGLKGILGKARRFLKAG
Ga0207903_10440634	3300025287	Deep Ocean	MSDAMIKEGVMKQMLCNHCQRPVNKDKDRIVVTTFSGLTKNVRWYCPTNCGNGGLKGILGKTRKLLRM
Ga0208934_10644861	3300025293	Deep Ocean	NKEGVMKTMLCSSCGYPMDKDKDRIVVSTFTGSTKRVRWYCGNFSCCAPVPISSGPKGILGKARQLLRMG
Ga0208316_10692401	3300025296	Deep Ocean	MKQMLCNHCQRPVNRDKDRIVVTTFTGITKNVRWYCPTDCGSGGLKGILGKTRKLLRMG
Ga0208181_10233291	3300025300	Deep Ocean	ATDARNRQWSNKERVMKTMLCGNCGYPVNKDKDRIVVSTFTGTTKRVRWYCPKDCGNGGMKGILGKARQLLRMG
Ga0208181_10858231	3300025300	Deep Ocean	MKTMLCSSCGYPVNKDKDRIVVSTFTGSTKRVRWYCPKDCGNGGMKGIL
Ga0208181_11049532	3300025300	Deep Ocean	MKTMLCSSCGYPVNKDKDRIVVSTFTGATKRVRWYCGNFSCCAPVPISSGPKGILGKARQLLRMG
Ga0208684_11247692	3300025305	Deep Ocean	MKQMLCGNCGHPVNKDKDRIVVSTFTGATKRVRWYCPKDCGNGGMKGI
Ga0208317_10139722	3300026117	Marine Oceanic	MKEGTMKQMLCSSCQRPVNKDKDRIVVSTFTGITKNVRWYCPQDCGSGGLKGILGKARRFLKAG
Ga0256381_10185592	3300028018	Seawater	MKQMLCSSCGYPVNKDKDRIVVSTFTGATKRVRWYCPKDCGNGGMKGILGKARQLLRMG
Ga0315336_10949283	3300032132	Seawater	MKQMLCNHCQRPVNKDQDRIVVTTFSGLTKNVRWYCLTNCGNGGLKGILGKTRKLLRMG
Ga0315336_11008604	3300032132	Seawater	MSDATIKEGVMKQMLCNHCQRPVNKDKDRIVVTTFSGLTKNVRWYCPTNCGSGGLKGILGKTRKLLRMG
Ga0315336_11017734	3300032132	Seawater	MKQMLCNHCQRPVNKDKDRIVVTTFSGLTKNVRWYCPTNCGSGGLKGILGKTRKLLRMG
Ga0315304_12060332	3300032145	Marine	VIRTPIRRVIHMKEGTMKQMLCSSCQRPVNKDKDRIVVSTFTGITKKVRWYCPKDCGSGGLKGILGKARRFLKAG
Ga0326756_038751_58_261	3300034629	Filtered Seawater	VIQIEEGAMKTMLCGNCGHPVNKETDRIVVSTFTGITKNVRWYCPQDCGNGGVKGIVKKARQLLRVG
Ga0326741_060832_437_631	3300034654	Filtered Seawater	VIQIEEGAMKTMLCSSCGYPVNKDQDRIVVSTFTGITKNVRWYCPKDCGNGGMKGVLKKARQLLR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F074020

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences