Metagenome Family F073993

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F073993
Family Type	Metagenome
Number of Sequences	120
Average Sequence Length	97 residues
Representative Sequence	MKTLKVAVLVALISLVGHAQERSDADATYALKGPVRTLKVEVATFVSKDGGYVEGPRVVQMEATFNQDGNRTDLLIYNDKGVLSRRIVMKF
Number of Associated Samples	93
Number of Associated Scaffolds	120

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	94.17 %
% of genes near scaffold ends (potentially truncated)	99.17 %
% of genes from short scaffolds (< 2000 bps)	93.33 %
Associated GOLD sequencing projects	84
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.55

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (52.500 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere (15.000 % of family members)
Environment Ontology (ENVO)	Unclassified (55.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (79.167 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 26.05% β-sheet: 35.29% Coil/Unstructured: 38.66%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.55
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.55
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 120 Family Scaffolds
PF00892	EamA	19.17
PF13505	OMP_b-brl	5.00
PF00989	PAS	2.50
PF13519	VWA_2	2.50
PF03551	PadR	1.67
PF13263	PHP_C	1.67
PF04542	Sigma70_r2	1.67
PF07336	ABATE	1.67
PF02861	Clp_N	1.67
PF00072	Response_reg	0.83
PF13474	SnoaL_3	0.83
PF08281	Sigma70_r4_2	0.83
PF00578	AhpC-TSA	0.83
PF04820	Trp_halogenase	0.83
PF01850	PIN	0.83
PF00248	Aldo_ket_red	0.83
PF00158	Sigma54_activat	0.83
PF02687	FtsX	0.83
PF01844	HNH	0.83

COG ID	Name	Functional Category	% Frequency in 120 Family Scaffolds
COG0542	ATP-dependent Clp protease, ATP-binding subunit ClpA	Posttranslational modification, protein turnover, chaperones [O]	1.67
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	1.67
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	1.67
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	1.67
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	1.67
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	1.67
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	1.67
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	1.67
COG5516	Uncharacterized conserved protein containing a Zn-ribbon-like motif, possibly RNA-binding	General function prediction only [R]	1.67

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.50 %
All Organisms	root	All Organisms	47.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.50 %
cellular organisms	root	All Organisms → cellular organisms	47.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.50 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	47.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.50 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	24.17 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	3.33 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.50 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	7.50 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	3.33 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2.50 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.67 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.50 %
Blastocatellales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales	6.67 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.33 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	2.50 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1.67 %
unclassified Blastocatellia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia	0.83 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.50 %
Pyrinomonadaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae	6.67 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.33 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2.50 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.67 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.83 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.50 %
unclassified Pyrinomonadaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae	6.67 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.33 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2.50 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1.67 %
Cystobacterineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	0.83 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.50 %
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	6.67 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.33 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2.50 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1.67 %
Myxococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae	0.83 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.50 %
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	6.67 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.33 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2.50 %
Candidatus Koribacter versatilis Ellin345	isolate	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis → Candidatus Koribacter versatilis Ellin345	1.67 %
unclassified Myxococcaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae	0.83 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.50 %
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	6.67 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.33 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2.50 %
Candidatus Koribacter versatilis Ellin345	isolate	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis → Candidatus Koribacter versatilis Ellin345	1.67 %
Myxococcaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae → Myxococcaceae bacterium	0.83 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000787\|JGI11643J11755_11807638	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	2014	Open in IMG/M
3300000891\|JGI10214J12806_12929918	Not Available	581	Open in IMG/M
3300000956\|JGI10216J12902_115891509	Not Available	879	Open in IMG/M
3300001990\|JGI24737J22298_10039780	All Organisms → cellular organisms → Bacteria → Acidobacteria	1445	Open in IMG/M
3300004114\|Ga0062593_100936993	All Organisms → cellular organisms → Bacteria	880	Open in IMG/M
3300004156\|Ga0062589_101966551	Not Available	592	Open in IMG/M
3300005290\|Ga0065712_10013609	All Organisms → cellular organisms → Bacteria	1890	Open in IMG/M
3300005293\|Ga0065715_10097553	All Organisms → cellular organisms → Bacteria → Acidobacteria	3688	Open in IMG/M
3300005330\|Ga0070690_101618625	Not Available	525	Open in IMG/M
3300005331\|Ga0070670_101440941	Not Available	632	Open in IMG/M
3300005332\|Ga0066388_108662590	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
3300005333\|Ga0070677_10532339	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	641	Open in IMG/M
3300005340\|Ga0070689_101458079	Not Available	619	Open in IMG/M
3300005344\|Ga0070661_100693877	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	829	Open in IMG/M
3300005345\|Ga0070692_10878825	All Organisms → cellular organisms → Bacteria	618	Open in IMG/M
3300005365\|Ga0070688_101295882	Not Available	588	Open in IMG/M
3300005366\|Ga0070659_101243966	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	659	Open in IMG/M
3300005406\|Ga0070703_10084911	All Organisms → cellular organisms → Bacteria → Acidobacteria	1086	Open in IMG/M
3300005406\|Ga0070703_10505282	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	545	Open in IMG/M
3300005438\|Ga0070701_10071425	Not Available	1857	Open in IMG/M
3300005438\|Ga0070701_10441934	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	833	Open in IMG/M
3300005438\|Ga0070701_10833141	Not Available	632	Open in IMG/M
3300005440\|Ga0070705_100791802	Not Available	753	Open in IMG/M
3300005441\|Ga0070700_101394954	All Organisms → cellular organisms → Bacteria	592	Open in IMG/M
3300005456\|Ga0070678_102245005	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	518	Open in IMG/M
3300005457\|Ga0070662_101964331	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	505	Open in IMG/M
3300005458\|Ga0070681_11868939	Not Available	528	Open in IMG/M
3300005471\|Ga0070698_100258819	All Organisms → cellular organisms → Bacteria	1673	Open in IMG/M
3300005536\|Ga0070697_101702344	Not Available	564	Open in IMG/M
3300005549\|Ga0070704_100376793	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1204	Open in IMG/M
3300005549\|Ga0070704_100464075	Not Available	1093	Open in IMG/M
3300005577\|Ga0068857_101887652	Not Available	585	Open in IMG/M
3300005577\|Ga0068857_101972855	Not Available	572	Open in IMG/M
3300005578\|Ga0068854_100510501	All Organisms → cellular organisms → Bacteria	1014	Open in IMG/M
3300005578\|Ga0068854_102108751	Not Available	521	Open in IMG/M
3300005617\|Ga0068859_101070480	Not Available	886	Open in IMG/M
3300005617\|Ga0068859_102086886	Not Available	626	Open in IMG/M
3300005617\|Ga0068859_102532657	Not Available	565	Open in IMG/M
3300005618\|Ga0068864_100737410	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	965	Open in IMG/M
3300005618\|Ga0068864_102218331	Not Available	556	Open in IMG/M
3300005840\|Ga0068870_10563883	Not Available	769	Open in IMG/M
3300005841\|Ga0068863_102428666	Not Available	534	Open in IMG/M
3300005841\|Ga0068863_102744250	Not Available	501	Open in IMG/M
3300005842\|Ga0068858_100375037	All Organisms → cellular organisms → Bacteria	1365	Open in IMG/M
3300006049\|Ga0075417_10479696	Not Available	623	Open in IMG/M
3300006169\|Ga0082029_1647407	Not Available	604	Open in IMG/M
3300006755\|Ga0079222_10121507	All Organisms → cellular organisms → Bacteria	1423	Open in IMG/M
3300006846\|Ga0075430_101718456	Not Available	515	Open in IMG/M
3300006853\|Ga0075420_100172265	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae → Myxococcaceae bacterium	1895	Open in IMG/M
3300006880\|Ga0075429_101463432	Not Available	594	Open in IMG/M
3300006894\|Ga0079215_10104685	All Organisms → cellular organisms → Bacteria	1255	Open in IMG/M
3300006904\|Ga0075424_101461770	Not Available	726	Open in IMG/M
3300009011\|Ga0105251_10459268	Not Available	591	Open in IMG/M
3300009098\|Ga0105245_11143074	All Organisms → cellular organisms → Bacteria	826	Open in IMG/M
3300009100\|Ga0075418_10880433	Not Available	968	Open in IMG/M
3300009100\|Ga0075418_11850615	Not Available	657	Open in IMG/M
3300009101\|Ga0105247_10957633	Not Available	665	Open in IMG/M
3300009148\|Ga0105243_12094402	All Organisms → cellular organisms → Bacteria → Acidobacteria	601	Open in IMG/M
3300009148\|Ga0105243_12252531	Not Available	582	Open in IMG/M
3300009162\|Ga0075423_13223845	All Organisms → cellular organisms → Bacteria → Acidobacteria	500	Open in IMG/M
3300009174\|Ga0105241_10416073	All Organisms → cellular organisms → Bacteria	1182	Open in IMG/M
3300009174\|Ga0105241_10598549	Not Available	996	Open in IMG/M
3300009174\|Ga0105241_11003157	Not Available	781	Open in IMG/M
3300009174\|Ga0105241_11356662	Not Available	679	Open in IMG/M
3300009177\|Ga0105248_10224967	All Organisms → cellular organisms → Bacteria → Acidobacteria	2112	Open in IMG/M
3300009177\|Ga0105248_11491604	All Organisms → cellular organisms → Bacteria	765	Open in IMG/M
3300009553\|Ga0105249_11418244	Not Available	766	Open in IMG/M
3300009553\|Ga0105249_11447386	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	759	Open in IMG/M
3300010036\|Ga0126305_11156496	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	534	Open in IMG/M
3300010038\|Ga0126315_10150700	All Organisms → cellular organisms → Bacteria → Acidobacteria	1376	Open in IMG/M
3300010040\|Ga0126308_10792857	All Organisms → cellular organisms → Bacteria	656	Open in IMG/M
3300010166\|Ga0126306_11051358	All Organisms → cellular organisms → Bacteria	665	Open in IMG/M
3300010373\|Ga0134128_10864328	All Organisms → cellular organisms → Bacteria	1002	Open in IMG/M
3300010399\|Ga0134127_10437785	Not Available	1303	Open in IMG/M
3300010400\|Ga0134122_10789452	All Organisms → cellular organisms → Bacteria	905	Open in IMG/M
3300010400\|Ga0134122_11456249	All Organisms → cellular organisms → Bacteria	702	Open in IMG/M
3300010403\|Ga0134123_11914962	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis → Candidatus Koribacter versatilis Ellin345	649	Open in IMG/M
3300011119\|Ga0105246_12444709	Not Available	513	Open in IMG/M
3300012948\|Ga0126375_11554591	Not Available	568	Open in IMG/M
3300013306\|Ga0163162_12011386	Not Available	662	Open in IMG/M
3300013306\|Ga0163162_12189202	Not Available	635	Open in IMG/M
3300013308\|Ga0157375_10821177	Not Available	1078	Open in IMG/M
3300014325\|Ga0163163_12029106	Not Available	635	Open in IMG/M
3300014325\|Ga0163163_12756565	Not Available	548	Open in IMG/M
3300015372\|Ga0132256_102974570	Not Available	570	Open in IMG/M
3300018422\|Ga0190265_11754046	Not Available	730	Open in IMG/M
3300018466\|Ga0190268_11233726	Not Available	623	Open in IMG/M
3300018466\|Ga0190268_11291966	Not Available	614	Open in IMG/M
3300018469\|Ga0190270_10398790	All Organisms → cellular organisms → Bacteria → PVC group	1273	Open in IMG/M
3300018476\|Ga0190274_12253347	Not Available	642	Open in IMG/M
3300025315\|Ga0207697_10246171	All Organisms → cellular organisms → Bacteria → Acidobacteria	790	Open in IMG/M
3300025899\|Ga0207642_10156896	All Organisms → cellular organisms → Bacteria → Acidobacteria	1218	Open in IMG/M
3300025900\|Ga0207710_10065778	All Organisms → cellular organisms → Bacteria → Acidobacteria	1653	Open in IMG/M
3300025908\|Ga0207643_10888397	Not Available	578	Open in IMG/M
3300025911\|Ga0207654_10943551	Not Available	626	Open in IMG/M
3300025933\|Ga0207706_10109449	All Organisms → cellular organisms → Bacteria	2431	Open in IMG/M
3300025935\|Ga0207709_10539721	Not Available	916	Open in IMG/M
3300025938\|Ga0207704_11740717	Not Available	536	Open in IMG/M
3300026035\|Ga0207703_10122807	All Organisms → cellular organisms → Bacteria → Acidobacteria	2231	Open in IMG/M
3300026035\|Ga0207703_11008021	Not Available	799	Open in IMG/M
3300026067\|Ga0207678_10685894	Not Available	901	Open in IMG/M
3300026089\|Ga0207648_10050890	All Organisms → cellular organisms → Bacteria	3621	Open in IMG/M
3300026089\|Ga0207648_11317944	All Organisms → cellular organisms → Bacteria → Acidobacteria	678	Open in IMG/M
3300026095\|Ga0207676_10581992	All Organisms → cellular organisms → Bacteria	1073	Open in IMG/M
3300026095\|Ga0207676_11822629	Not Available	607	Open in IMG/M
3300026116\|Ga0207674_10661415	Not Available	1009	Open in IMG/M
3300026118\|Ga0207675_101822710	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	627	Open in IMG/M
3300026118\|Ga0207675_102314743	All Organisms → cellular organisms → Bacteria → Acidobacteria	551	Open in IMG/M
3300027873\|Ga0209814_10453805	Not Available	566	Open in IMG/M
3300027907\|Ga0207428_10107347	All Organisms → cellular organisms → Bacteria	2151	Open in IMG/M
3300028380\|Ga0268265_10763033	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis → Candidatus Koribacter versatilis Ellin345	940	Open in IMG/M
3300028381\|Ga0268264_10141741	All Organisms → cellular organisms → Bacteria	2144	Open in IMG/M
3300028381\|Ga0268264_10485641	All Organisms → cellular organisms → Bacteria → Acidobacteria	1202	Open in IMG/M
3300028381\|Ga0268264_10664278	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1032	Open in IMG/M
3300030511\|Ga0268241_10056453	Not Available	851	Open in IMG/M
3300031731\|Ga0307405_10593235	Not Available	903	Open in IMG/M
3300031911\|Ga0307412_10999519	Not Available	739	Open in IMG/M
3300032126\|Ga0307415_100899139	Not Available	816	Open in IMG/M
3300032179\|Ga0310889_10777322	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	504	Open in IMG/M
3300032211\|Ga0310896_10309619	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	819	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	64.17%
Environmental	Environmental	35.83%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	64.17%
Terrestrial	Environmental → Terrestrial	35.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	35.83%
Rhizosphere	Host-Associated → Plants → Rhizosphere	32.50%
Rhizoplane	Host-Associated → Plants → Rhizoplane	30.00%
Roots	Host-Associated → Plants → Roots	1.67%

Habitat	Taxonomy	Distribution
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	27.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	25.83%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	21.67%
Loam	Environmental → Terrestrial → Soil → Loam	14.17%
Soil	Host-Associated → Plants → Rhizosphere → Soil	6.67%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.67%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.67%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	27.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	25.83%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	14.17%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	13.33%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	6.67%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.33%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.50%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.67%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.67%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.67%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	15.00%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	10.00%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	8.33%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	5.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	5.00%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	5.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.17%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	4.17%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	4.17%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	4.17%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	4.17%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	3.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.50%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.50%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	2.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.67%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.67%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	1.67%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.67%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	1.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.83%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.83%
Termite Nest	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest	0.83%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.83%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.83%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.83%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000787	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001990	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3	Host-Associated	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006169	Termite nest microbial communities from Madurai, India	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009011	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300030511	Bulk soil microbial communities from Mexico - Amatitan (Am) metaG (v2)	Environmental	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031911	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1	Host-Associated	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300032179	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2	Environmental	Open in IMG/M
3300032211	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI11643J11755_118076384	3300000787	Soil	MRTLKIAVLVVLMSFVGHAQERSDADATYALKGPVHTFKVEVATFVSKDGSYVEGPRVAQMEATFNQDGNRTDLLMYDDRGAVVRRIVMKFDGLKMTEALNYDGLGKMWLRIVNVYDEQSRIK
JGI10214J12806_129299181	3300000891	Soil	MDGSGKGEIKMKLLKVVVLVALMSLVGNAQERSDADATYALKGPVRTLRVEIATFVSKDGDYVEGPRVVQMEASFNQDGNRTDLKMYNDKGVFV
JGI10216J12902_1158915092	3300000956	Soil	MKTLHVLVLIALLTVVGQAQERSMADATYALKGPVKTFRTEVATFVLKNGEYVEGPRVPQMEATFNRDGNRTDFYIYNREGKVGRRIVMKFEGRRMIECLNYDG
JGI24737J22298_100397801	3300001990	Corn Rhizosphere	MKPLKAVVLVALMLMMGHAQERSDADATYALKGPVRTFRVEVATVVLKDRNYVEGPRMPQMEASFNEDGNRTDLRMYDDKGVLSRRIVMKFDGRRMTEAINYDGAGNM
Ga0062593_1009369932	3300004114	Soil	MKPLKVVVLVALMSLVGHAQERPISDAIATYALKGPVRSFRVEVATFVSKDGDYVEGPRVPQMEASFNQDGNRTDLHIY
Ga0062589_1019665511	3300004156	Soil	MDGSGKGEIKMKLLKVVVLVALMSLVGNAQERSDADATYALKGPVRTLRVEIATFVSKDGDYVEGPRVVQMEASFNQDGNRTDLRLYNDKGVL
Ga0065712_100136093	3300005290	Miscanthus Rhizosphere	MKPLKVLLLVALMSLTAHAQERSDADATYALKGSVRAFRVELATFVSKDGNYVEGPRVVQMEASFNEDGNRTDLKMYNDKGVLVRRIVMKFDGRKMIEAINYDGAGKMWLRTADVYDDKGRLKE
Ga0065715_100975531	3300005293	Miscanthus Rhizosphere	MKPLKAVVLVALMLMMGHAQERSDADATYALKGPVRTFRVEVATVVLKDRNYVEGPRMPQMEASFNEDGNRTDLRIYDDKGVLSRRIVMKFDGRRMTEAINYDGAGNMWLRTVDVYDDQK
Ga0070690_1016186251	3300005330	Switchgrass Rhizosphere	MKTLKVAVLVALMSLAGHAQERSDADATYALKGPVRTLKVEIATFVAKDGGYVEGPRVTQMEATFNQDGNRTDLLIYNDKGALVRRIVMKFDGRKMTEALNYDG
Ga0070670_1014409411	3300005331	Switchgrass Rhizosphere	MKTLKVAVLVALMCLVGHAQEKSDAEATYALKGPVRSFRVESATFVSKDGGYVEGPRVVQMEASFNEDGNRTDLRMYDEKG
Ga0066388_1086625902	3300005332	Tropical Forest Soil	MKTLKVLVLVALMVLAVHAQERSDADVTYALKGPVRTFKVETATFVLKNGDYVEGPRVTQMEASFNTDGNRTDLHIYDDKGVLTRRIVMKFD
Ga0070677_105323392	3300005333	Miscanthus Rhizosphere	MTAKRSKQMKTLKIVVLVALMSLVAQAQDRSDADATYALKGPVRTFKVEGATFVLKDGEYVEGPRVAQMEASFNEDGNRTDLLMYNDKGVLSRRIVMKFDGRKMTEA
Ga0070689_1014580792	3300005340	Switchgrass Rhizosphere	MKALKVVVLVALMAFVAQAQERSDAEATYALKGPVRTFRAEVATFVLQDGDYVEGPRVVQMEASFNQDGNRTDLR
Ga0070661_1006938772	3300005344	Corn Rhizosphere	MHMKLLKVLVVVVLMSLAGQAQERSDADATYALKGPVHSFRLEGATFVSQGSDYVEGPRVVQMEATFNEDGNRTELRMYDDKGVLSRRIVMKFDGRKMIEALNYDGGGRMWLRIVDVYDGQG
Ga0070692_108788252	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MKTLKVAVLVALMSFVAHAQERSDADATYALKGPVRTLKVEIATFVSKDGGYVEGPRVTQMEATFNQDGNRTDLHIYNDKGALVR
Ga0070688_1012958821	3300005365	Switchgrass Rhizosphere	MSLATHAQERSDADATYALKGPVRAFRVEVATFVSKDGNYVEGPRVVQMEATFNEDGNRTDLKMYNDKGVLVRRIVMKFDGRKM
Ga0070659_1012439662	3300005366	Corn Rhizosphere	MKPLKAVVLVALMLMMGHAQERSDADATYALKGPVRTFRVEVATFVLKDGDYVEGPRVPQMEASFNEDGNRTDLRMYDDKGVLSR
Ga0070703_100849112	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	MTAKRSKQMKTLKIVVLVALMSLVAQAQDRSDADATYALKGPVRTFKVEGATFVLKDGEYVEGPRVAQMEASFNEDGNRTDLLMYNDKGVLSRRIVMKFDGRKMTEAFNYDGGGRMWLRIVNVYDDNGRLK
Ga0070703_105052822	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	MKPLKAVVLVALMLMLGHAQERSDADATYALKGPVRTFRVEVATVVLKDRNYVEGPRMPQMEASFNEDGNRTDLRIYDDKGVLSRRIVMKF
Ga0070701_100714252	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MKLLKVVVLVTLMSLVGHAQERSDADATYALKGPVRTFRVETATFVSKDGDYIEGPRVLQMEAWFNQDGNRTDLRMYNDKGVLSRRIVMKFD
Ga0070701_104419342	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MKALKVVVLLALMAFVAQAQERSDAEATYALKGPVRTFRVEVATFVLQDGDYVEGPRVVQMEASFNQDGNRTDLRMYNDKGELSRRIVMKFDGRKMTEAIN
Ga0070701_108331412	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MKTLKVAVLVALMSLAGHAQERSDADATYALKGPVRTLKVEIATFVSKDGGYVEGPRVVQMEATFNQDGNRTDLLIYNDKGVLSRRIVMKF
Ga0070705_1007918022	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MKTLKTLMFVALVLTLAASVASAQESRSMADATYALKGPVRSFRIEVATFVLKDGNYVEGPRVVQSEASFNTDGNRTD
Ga0070700_1013949541	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MKTLKLLVLVALMSVVAHAQERSDADATYALKGPVHTFRVEVATFVSKDGDYVEGPRVVQMEASFNEDGNRTELRMYNDQ
Ga0070678_1022450051	3300005456	Miscanthus Rhizosphere	MTAKRSKQMKTLKIVVLVALMSLVAQAQDRSDADATYALKGPVRTFKVEGATFVLKDGEYVEGPRVAQMEASFNEDGNR
Ga0070662_1019643312	3300005457	Corn Rhizosphere	MTAKRSKQMKTLKIVVLVALMSLVAQAQDRSDADATYALKGPVRTFKVEGATFVLKDGEYVEGPRVAQMEASFNEDGNRTDLLMYNDKGVLSRRIVMKFDGRKMTE
Ga0070681_118689391	3300005458	Corn Rhizosphere	MKLLKVVVLVALISMVAYAQERSIADATYALKGPVRTFRVEVATFVSKDGDYVEGPRVTQMEASFNQDGNRTDLRIYNDKGEFS
Ga0070698_1002588193	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MKTLKVVVLVALMSVVGHAQERSIADATYALKGPVRTFRVEVATFVSKDGDYVEGPRVAQMEAWFNEHGNRTDLHIYNDKGVLSRRIVMRFDGRKMTEAINYDGAGKMWLRTVDVYDDKSLLKEE
Ga0070697_1017023442	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MKTLKVVVLVALMSVVGHAQERSIADATYALKGPVRTFRVEVATFVSKDGDYVEGPRVAQMEAWFNEDGNRTDLHIYNDKGVLSRRIVMRFDGRKMTEAINYDGAGKMWLRTVDVYDDKSLLKEELTYNGD
Ga0070704_1003767931	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MKALKVVVLVALMAFVAQAQERSDAEATYALKGPVRTFRVEVATFVLQDGDYVEGPRVVQMEASFNQDGNRTDLRMYNDKGELSRRIVMKFDG
Ga0070704_1004640752	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MKTLKVAVLVALMSLAGHAQERSDADATYALKGPVRTLKVEIATFVAKDGGYVEGPRVTQMEATFNQDGNRTDLLIYNDKGALVRRIVMKFDGRKM
Ga0068857_1018876521	3300005577	Corn Rhizosphere	MKTLKVVLLVALMFVVGHAQDKSDAEITYALKGPVRSFKVEVATFVSKLGDYVEGPKVTQMEATFNQDGNRTDLRIYNEKGVLSRRIVMKYDGRKMTEGLNYDGAGNMWLRIVDVYD
Ga0068857_1019728551	3300005577	Corn Rhizosphere	MRLLKVGVLIALMSLVGHGQERSTADATYALKGPVRTFKLEVATFVSKDGNYIEEPRVVQMEASFNQDGN
Ga0068854_1005105013	3300005578	Corn Rhizosphere	MKTLKVALLVALLSLVVHAQERSDADATYALKGPVRTMKLETATFVPKDGGYVEGPRVVQMEATFNQDGNRTDLLIYNDKG
Ga0068854_1021087512	3300005578	Corn Rhizosphere	MKSLKVVLLVALMAFVAHAQESSDAQATYALKGPVRTFRVEVATFVQQDGDYVQGPRVVQMEATFNQDGN
Ga0068859_1010704801	3300005617	Switchgrass Rhizosphere	MKPLKVLLLVALMSLTAHAQERSDADATYALKGSVRAFRVELATFVSKDGNYVEGPRVVQMEASFNEDGNRTDLKMYNDKGVLVRRIVMKFDGRKMIEAINYDGAGKMWLRTADVYDDKGRLKEE
Ga0068859_1020868862	3300005617	Switchgrass Rhizosphere	MDGSGKGEIKMKLLKVVVLVALMSLVGNAQERSDADATYALKGPVRTLRVEIATFVSKDGDYVEGPRVVQMEASFNQDGNRTDLKMYNDKGVFVR
Ga0068859_1025326571	3300005617	Switchgrass Rhizosphere	MKTLKIAVLVALMSFAGHAQERSDADATYALKGPVRTMSVEIATFVSKEGGYVEGPRVKQMEATFNQDGNRTDLLIYNDTGALVRRIVMKFDGRKMT
Ga0068864_1007374101	3300005618	Switchgrass Rhizosphere	MKALKVVVLVALMAFVAQAQERSDAEATYALKGPVRTFRVEVATFVLQDGDYVEGPRVVQMEASFNQDGNRTDLRMYNDK
Ga0068864_1022183312	3300005618	Switchgrass Rhizosphere	MKTLKVAVLVALMCLVGHAQERSDAEVTYALKGPVRTFKVEVATFVSQDGDYVEGPRMAQMEASFNQDGNRTDLHIYNNKGVLSRRIVMKFDGR
Ga0068870_105638831	3300005840	Miscanthus Rhizosphere	MKTLKVAVLVALMSLAGHAQERSDADATYALKGPVRTLKVEVATFVSKDGGYVEGPRVVQMEATFNQDGNRTDLLIYNDKGVLSRRIVMKFDGRKMTEALNYDGAG
Ga0068863_1024286661	3300005841	Switchgrass Rhizosphere	MKTLKVAVLVALISLVGHAQERSDADATYALKGPVRTLKVEVATFVSKDGGYVEGPRVVQMEATFNQDGNRTDLLIYNDKGVLSRRIVMKF
Ga0068863_1027442501	3300005841	Switchgrass Rhizosphere	MKALKVVVLVALMALVAQAQERSDAEATYALKGPVRTFRVEVATFVLQDGDYVEAPRVVQMEASFNQDGNRTDLRMYNDKGELSRRIVMKFDGRKM
Ga0068858_1003750373	3300005842	Switchgrass Rhizosphere	MKTLKVALLVALLSLVVHAQERSDADATYALKGPVRTLKVEVATFVSKDGGYVEGPRVKQMEASFNQDGNRTDLLIYNDKGALVRRIVMKFDGRKMTE
Ga0075417_104796962	3300006049	Populus Rhizosphere	MKTLKAVVLVALMSILGHAQERSIADATYALKGPVRTFRVEVATFVSKDGDYVEGPRVTQMEASFNQDGNRTDLRIYNDKGVLSRRIVMKFDG
Ga0082029_16474071	3300006169	Termite Nest	MKTLKVAVLVALMSLVGHAQERSDAEVTYALKGPVRTFRVEVATFVSKDGDYVEGPRMPQMEAWFNQDGNRTDLHIYNNKGVLRRRIVMKFDGKKMTEAINYDGAGKMWL
Ga0079222_101215074	3300006755	Agricultural Soil	MKSLKVVVLVALMSLVGHAQDRSDADVTYALKGPVRTFRVEVATFVSKDGDYVEGPRVAQMEASFNQDGNRTDLQIYNDKGVLSRRIVMKFDGR
Ga0075430_1017184561	3300006846	Populus Rhizosphere	MKPLKVVILAALMSVMGHAQERSMAEATYALKGPVRTFRVEVATFVSKDGDYAEGRRVAQMEASFNLDGNRTDLHIYNDKGVVSRRIVMKFDGRKMTEAINYDGAGRMWLRTVDVYDDKSLLK
Ga0075420_1001722653	3300006853	Populus Rhizosphere	MKTLNVAFLVALTCVIAQAQNRSMAEATYALKGPVRTYRIETATFVNEGSSYVEGPRVLLSEASFNEDGNRTDLRMYNDKGVLVRRI
Ga0075429_1014634322	3300006880	Populus Rhizosphere	MKTLNVAFLVALTCVIAQAQNRSMAEATYALRGPVRTYRIETATFVNEGGSYVEGPRVLLSEASFNEDGNRTDLRMYNDKGVLVRR
Ga0079215_101046852	3300006894	Agricultural Soil	MKFLTVLLLVAALLAVAQAQNRSMADATYALKGPVRTFRTEVATFVLKDGGYVEGPRVVQTEAWFNQDGNRTDLHLYN
Ga0075424_1014617702	3300006904	Populus Rhizosphere	MKTLKAVVLVALMSILGHAQERSIADATYALKGPVRTFRVEVATFVPKDRDYVEAARVVQMEAWFNEDGNRTDLRIYNDKGVLSRRIVMKFDGRKM
Ga0105251_104592682	3300009011	Switchgrass Rhizosphere	MRPLKVVVLVALMFLVGHAQDRSDADATYALKGSVRAFRVEVATFVSKDGNYVEGPRVVQMEASFNEDGNRTDLKMYNDKGELVRRIVMKFDGRRMTEAINYDGAGKMCLRTVNVYDDKRLLKEELIYNG
Ga0105245_111430741	3300009098	Miscanthus Rhizosphere	MKILKVAVLVALMSLVAHAQERSDAEVTYALKGPVRSFKVEVATFVSKDDDYVEGPRVLQMEASFNDDGNRTDLRMYDDKGVLS
Ga0075418_108804332	3300009100	Populus Rhizosphere	MKTLNVAFLVALTCVIAQAQNRSMAEATYALKGPVRTYRIETATFVSEGSSYVEGARVLLSEASFNEDGNRTDLRMYNDKGVLVRRI
Ga0075418_118506151	3300009100	Populus Rhizosphere	MKTLNVAFLVALMCVIAQAQNRSMADATYALKGPVRTYRLETATFVNEGSSYVEGPRVLLSEASFNEDGNRTDLRMYNDKGVLVRRIVMKFEGRRMIEAINYDGNGKMWMR
Ga0105247_109576331	3300009101	Switchgrass Rhizosphere	MKTLKIAVLVALISLVGHAQGKSDADATYALKGPVRTLKLEVATFVSKDGGYVEGPREVQMEATFNQDGNRTDLLIYNDKGVLSRRIVMKFDGRKMTEALNYDGAGNMWLRIV
Ga0105243_120944022	3300009148	Miscanthus Rhizosphere	MKPLKAVVLVALMLMMGHAQERSGADATYALKGPVRTFRVEVATVVLKDCNYVEGPRMPQMEASFNEDGNRTDLRIYDDKGVLSRRI
Ga0105243_122525311	3300009148	Miscanthus Rhizosphere	MKLPKVAVLIALMSLVALGQERSMADATYAIKGPVRTFKVEIATFVSRDGDYREEARVAQMEASFNPDGNRTDLRIYDDKGV
Ga0075423_132238452	3300009162	Populus Rhizosphere	MKPLKVVVLVALMFLVGHAQERSIADATYGLKGPVRTFRVEVATFVSKDGDYVEGPRVTQMEASFNQDGNRTDLHIYDDKGVL
Ga0105241_104160732	3300009174	Corn Rhizosphere	MKILKVAVLVALMSLVAHAQERSDAEVTYALKGPVRSFKVEVATFVSKDDDYVEGPRVLQMEASFNDDGNRTDLRMYDDKGVLSRR
Ga0105241_105985491	3300009174	Corn Rhizosphere	MDGSGKGEIKMKLLKVVVLVALMSVVGHAQERSDADATYALKGPVRTFRVEIATFVSKDGDYVEGPRVVQMEASFNQDGNRTDLRMYNDKGVLSR
Ga0105241_110031571	3300009174	Corn Rhizosphere	MLVALMSIAGHAQEKSDADATYALKGPVRTMRVEVATFVSKGGDYVEGPRLVQMEATFNQDGNRTDLHIYNNKGVLSRRIVMKFAGRKKTEAMN
Ga0105241_113566622	3300009174	Corn Rhizosphere	MKTLKVAVLVALVSLVGHAQEKSDADATYALKGSVRAFKVEVATFVSKDGGYVEEPRVAQMEASFNQDGNRTDLHIYNNKGVLSRRIVMKFDGRKMTEAINYDGAGVMWLRTVDVYDDNS
Ga0105248_102249671	3300009177	Switchgrass Rhizosphere	MKTLKVAVLVALLSLVGHAQERSDADATYALKGPVRTLKVEVATFVSKDGGYVEGPRVAQIEATFNQDGNRTDLLIYNDKGVLSRRIVMKF
Ga0105248_114916042	3300009177	Switchgrass Rhizosphere	MKALKAVILIALMFLAAHAQERSDADATYALKGPVRTFKVEVARFVSIDGDYIEGPRVTQMEATFNQDGNRTDLRMYDDKGVLSRRIVM
Ga0105249_114182442	3300009553	Switchgrass Rhizosphere	MKTLKVAVLVALMSLAGHAQERSDADATYALKGPVRTLKVEIATFVSKDGGYVEGPRVTQMEATFNQDGNRTDLHIYNDKGALVRRIVMKFDGRKMTEALNYDGGGNMWLR
Ga0105249_114473862	3300009553	Switchgrass Rhizosphere	MKTLKVVVLVALIFLVGHAQERSDADATYALKGPVRTFRLEVAKFVFKEGDFVEGPRIPQMEASFNGDGNRTDLYIYDESGVVSRRIVMKFDGRKMTEALNYDGAGRMW
Ga0126305_111564962	3300010036	Serpentine Soil	MKTLKVVVLVALIALVGQAQERSTADATYALKGPVRTFRVEVATFALKDGDYVEGPRMPQMEASFNEDGNRTDLQIYDDKGVLSRRIVMKF
Ga0126315_101507001	3300010038	Serpentine Soil	MKTLKVAVLVALMSFVGHAQERSDADATYALKGPVHTMKVEVATFVSKDGGYVEGPRLTQMEATFNQDGNRTDLLIYNDKGVFSRRIVM
Ga0126308_107928572	3300010040	Serpentine Soil	MKLLKVGLLIALLSLVGHGQERTTADATYALKGPVRTFKVEITTFVSKDGDYIEQPRVAQMEASFNQDGNRTDLRIYNDKGVLSRRIVMKFEGRKMTEAINYDGEGRMWLRT
Ga0126306_110513581	3300010166	Serpentine Soil	MKLLKVGVLIALMSLVGHGQERSTADATYALKGPVRTFKVEIATFVSKDGDYIEEPRVPQMEASFNQDGNRT
Ga0134128_108643283	3300010373	Terrestrial Soil	MTDRGENNMKTLKVVVLVALMSVVGHAQERSIADATYALKGPVRTFRVEVATFVSKDGDYVEGPRVAQMEAWFNEDGNRTDLHIYNDKGVLSRR
Ga0134127_104377851	3300010399	Terrestrial Soil	MKTLKLLVLVALMSVVAHAQERSDADATYALKGPVHTFRVEVATFVSKDGDYVEGPRVVQMEASFNEDGNRTELRMYNDQGVLSRRIVMKFDGRKMTEAI
Ga0134122_107894521	3300010400	Terrestrial Soil	MKTLKLLVLVALMSVVAHAQERSDADATYALKGPVHTFRVEVATFVSKDGDYVEGPRVVQMEASFNEDGNRTELRMYNDQGALSRRIVMKFDGRKMTEAINYDGAGRMWLRTADAYDAQG
Ga0134122_114562491	3300010400	Terrestrial Soil	MKTLKVAVLVALMSLVGHAQERSDAEVTYALKGPVRTFKVEVATFVSKDGDYVEGPRVLQMEASFNEDGNRTDLRMYD
Ga0134123_119149622	3300010403	Terrestrial Soil	MKTLKVAVLVALISLAGHAQEKSDADATYALKGPVRTMKVEVATFVSKDGGYVEGPRVLQMDATFNEDGNRTDFHIYNEKGVATRRIVMKFD
Ga0105246_124447091	3300011119	Miscanthus Rhizosphere	MDGSGKGEIKMKLLKVVVLVALMSLVGNAQERSDADATYALKGPVRTFRVEIATFVSKDGDYVEGPRVVQMQASFNQDGNRTD
Ga0126375_115545912	3300012948	Tropical Forest Soil	MKPLKVVVLLALMSLMGHAQERSDADATYALKGPVRTFRVEVATFVSKGGDYVEGPRVAQMEASFNPDGNRTDLRMYNDQGVL
Ga0163162_120113862	3300013306	Switchgrass Rhizosphere	MKTLKVAVLVALISLAGHAQEKSDADATYALKGPVRTLKVEVATFVSTDHGYVEGSRVVQMEASFNQDGNRTDLLIYNDKGALVRRIVMKFDGRKMTE
Ga0163162_121892021	3300013306	Switchgrass Rhizosphere	MKLLRVVVLVVLMSVVGHAQERSDADATYALKGPVRTFRVETATFVSKDGDYIEGPRVLQMEAWFNQDGNRTDLRMYNDK
Ga0157375_108211772	3300013308	Miscanthus Rhizosphere	MKPLKVLLLVALMSLATHAQERSDADATYALKGSVRAFRVEVATFVSKDGNYVEGPRVVQMEASFNEDGNRTDLKMYNDKGVLVRRIVMKFDGRKMTEALNYDGGGNMWLRIVDVYDDQG
Ga0163163_120291061	3300014325	Switchgrass Rhizosphere	MKTLKVAVLVALISLVGHAQERSDADATYALKGPVRTLKVEVATFVSKDGGYVEGPRVAQMEATFNQDGNRTDLLIYNDKGVLSRRIVMKFDGRKMTEALNYDGAGNMWLRIVDVYNDQSKL
Ga0163163_127565651	3300014325	Switchgrass Rhizosphere	MKTLKIALLVALISLVGHAQGKSDADATYALKGPVRTLKLEVATFVSKDGGYVEGPREVQMEATFNQDGVRTDLLIYNDK
Ga0132256_1029745702	3300015372	Arabidopsis Rhizosphere	MKTLKVVVLVALLSVVGQAQERSIADATYALKGPVRTFKVEVASFVSKDGDYVEGPRVTQMEASFNHDGNRTDLRITIDRGVLTRRIVMKSDGRRMTEAL
Ga0190265_117540461	3300018422	Soil	MCKASTLAFTGIGPLTAIEVNNMKLLGVGILIALMSLVGHGQERSMADATYALKGPVRTFRVEVASFVSKDGDYLEEPRVAQMEASFNQDGNRTDLRIYDDKGVLSRRIVMKFEGRKMTEAINYDGAGSMWLRAVHVYDDKSV
Ga0190268_112337261	3300018466	Soil	MKTLKLVVLVALMSLVGHAQERSDADATYALKGPVRTFKVEVATVVSSLGDNVEGPRVPQMEASFNQDGNRTDLLIYNDKSELSRRIVMKFDGRKMTIYSLTPS
Ga0190268_112919661	3300018466	Soil	MKTLHVVALIALLSVVGQAQEVRSMADATYAIKGPVKSFRTEVATFILKDGEYVEGPRVVQAEASFNRDGNRTDFYMYDREGKLGRRIVMKFEGRRMLECINY
Ga0190270_103987901	3300018469	Soil	MKLLKVGVLIALMSLAGHGQERSMADATYALKGPVRTFKVEVARFVSKDGDYVEGPRVVQMEASFNQDGNRTDLRIYN
Ga0190274_122533471	3300018476	Soil	MKLLQVGVLIALMSLVVLGQERSMADATYAIKGPVRTFRVETATFVSKDGDYLEEPRVVQMEASFNQDGNRTDLRMYNDKGILARRIVMKFEGRKMTEAINYDGAGKMWLRAVDVYDDKG
Ga0207697_102461711	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	MKTLKVAVLVALMSFVAHAQERSDADATYALKGPVRSFRVEVATFASKDGFNVEGPRVLQMEATFNQDGNRTDLLMYDDKGGLVPLAAMRHRRE
Ga0207642_101568961	3300025899	Miscanthus Rhizosphere	MKTLKVAVLVALVSLVGHAQEKSDADATYALKGSVRAFKVEVATFVSKDGGYVEGPRVAQMEASFNQDGNRTDLRIY
Ga0207710_100657781	3300025900	Switchgrass Rhizosphere	MKTLKVAVLVALISLVGHAQERSDADATYALKGPVRTLKVEVATFVSKDGGYVEGPRVVQMEATFNQDGNRTDLLIYNDKGVLS
Ga0207643_108883971	3300025908	Miscanthus Rhizosphere	MDGSGKGEIKMKLLKVVVLVALMSLVGNAQERSDADATYALKGPVRTLRVEIATFVSKDGDYVEGPRVVQMEASFNQDGNRTDLKMYNDKGVFVRQIVMKFDGRRMTEAINY
Ga0207654_109435512	3300025911	Corn Rhizosphere	MNCLKVVMLVALMSIAGHAQEKSDADATYALKGPVRTMRVEVATFVSKGGDYVEGPRLVQMEATFNQDGNRTDLHIYNNKGVLSRRIVMKFAGRKKTEAMN
Ga0207706_101094491	3300025933	Corn Rhizosphere	MKTLKIVVLVALMSLVAQAQDRSDADATYALKGPVRTFKVEGATFVLKDGEYVEGPRVAQMEASFNEDGNRTDLLMYNDKGVLSRRIVMKFDGRKMTEAINYDGAGVMWLRTVDVYDDNGRLKEELT
Ga0207709_105397211	3300025935	Miscanthus Rhizosphere	MKTLKVAVLVALMSLAGHAQERSDADATYALKGPVRTLKVEIATFVAKDGGYVEGPRVTQMEATFNQDGNRTDLLIYNDKGALVRRIVMKFDGRKMTEALNY
Ga0207704_117407171	3300025938	Miscanthus Rhizosphere	MKTLKIALLVALISLVGHAQGRSDADATYALKGPVRTLKLEVATFVSKDGGYVEGPREVQMEATFNQDGN
Ga0207703_101228071	3300026035	Switchgrass Rhizosphere	MKPLKVLLLVALMSLTAHAQERSDADATYALKGSVRAFRVELATFVSKDGNYVEGPRVVQMEASFNEDGNRTDLKMYNDKGVLVRRIVMKFDGRKMIEAINYDGAGKM
Ga0207703_110080212	3300026035	Switchgrass Rhizosphere	MKTLKVAVLVALMSLAGHAQERSDADATYALKGPVRTLKVEIATFVSKDGGYVEGPRVTQMEATFNQDGNRTDLHIYNDKGALVRRIVMKFDGRKMTE
Ga0207678_106858941	3300026067	Corn Rhizosphere	MKTLKVAVLVALMSLAGHAQERSDADATYALKGPVRTFKVEVATFVSKDGGYIEGPRVAQMEASFNQDGNRTDLRMYNDKGVLSRRIVMKFDGKKMTEAINYDGEGRMWLRTLDVYNDQG
Ga0207648_100508905	3300026089	Miscanthus Rhizosphere	MKTLKVAVLVALMSLAGHAQERSDADATYALKGPVRTLKVEIATFVAKDGGYVEGPRVTQMEATFNQDGNRTDLLIYNDKGALVRRIVMKFDGRKMTE
Ga0207648_113179441	3300026089	Miscanthus Rhizosphere	MKTLKVALLVALLSLVVHAQERSDADATYALKGPARTLKVEVATFVSKDGGYVEGPRVKQMEASFNQDGNRTDLLIYNDKGALVRRIVMKFDGRKMTE
Ga0207676_105819922	3300026095	Switchgrass Rhizosphere	MKTLKVAVLVALMCLVGHAQERSDAEVTYALKGPVRTFKVEVATFVSQDGDYVEGPRMAQMEASFNQDGNRTDLHIYNNKGVLSRRIVMKFDGRK
Ga0207676_118226291	3300026095	Switchgrass Rhizosphere	MNTLKVLVLVALMALVGHAQERSDADATYALKGPVRTFRVEVATFVLKNGDYVEGPRVAQMEASFNQDGNRTDLHIYDDKGVLSRRIVMKFD
Ga0207674_106614152	3300026116	Corn Rhizosphere	MKALKVLVLVALMALVTQAQPQRSDAIATYALKGQVRTFRVEIANFVSKDGDYIEGPRVTQMEASFNEDGNRTDFRIYNDKGEMTRRIVM
Ga0207675_1018227102	3300026118	Switchgrass Rhizosphere	MKTLKVVVLVALIFLVGHAQERSDADATYALKGPVRTFRLEVAKFVFKEGDFVEGPRIPQMEASLNGDGNRTDLYIYDESGVVSRRIVMKFDGRKM
Ga0207675_1023147432	3300026118	Switchgrass Rhizosphere	MKTLKVAVLVALMSLAGHAQERSDADATYALKGPVRTLKVEIATFVAKDGGYVEGPRVTQMEATFNHDGNRTDLHIYNDKGAL
Ga0209814_104538051	3300027873	Populus Rhizosphere	MKTLKAVVLVALMSILGHAQERSIADATYALKGPVRTFRVEVATFVSKDGDYVEGPRVTQMEASFNQDGNRTDLRIYNDKGVLSRRIVMKFDGRKMTEALNYHGAGKMWLRIVDVYDDKSLLKEELT
Ga0207428_101073472	3300027907	Populus Rhizosphere	MKALKVLVLVALMSLAAHAQQRSDAVATYALKGPVRTFRVEVATFVSKDGDYVEGPRVAQMEASFNEDGNRTDLHIFNDKGVLSRRIVMKFDGRKMTEALNYDGAG
Ga0268265_107630331	3300028380	Switchgrass Rhizosphere	MKTLKIAVLVALMSLAGHAQEKSDADATYALKGPVRTLKVEVATFVSKDGSYVEGPRVAQMDASFNQDGNRTDLHIYDDKGVLTRRIVMKFDGRNMTEAIN
Ga0268264_101417413	3300028381	Switchgrass Rhizosphere	MKTLKVALLVALLSLVVHAQERSDADATYALKGPVRTLKVEVATFVSKDGGYVEGPRVKQMEASFNQDGNRTDLLIYNDKGALVRRIVMKFDGRKMTEALNYDGGGN
Ga0268264_104856411	3300028381	Switchgrass Rhizosphere	MKPLKAVVLVALMLMMGHAQERSDADATYALKGPVRTFRVEVATVVLKDRNYVEGPRMPQMEASFNEDGNRTDLRMYDD
Ga0268264_106642782	3300028381	Switchgrass Rhizosphere	MKTLKVVVLVALIFLVGHAQERSDADATYALKGPVRTFRLEVTKFVFKEGDFVEGPRIPQMEASFNGDGNRTDLYIYDDSGVVSRRIVMKFD
Ga0268241_100564532	3300030511	Soil	MKTLKLVVLVALMSVVGHAQERSIADATYAIKGPVRTFKVEVASFVLKDGDYVEGPRLTQMEASFNEDGNRTDLHIYDEKGVLIRRIVMKFDGRRMTE
Ga0307405_105932351	3300031731	Rhizosphere	MKTLKVVVLLALMSVVGHAQRSDADATYALKGPVRTLKVEVATFVSNVGDYVEGPRIVQMEALFNQDGNRTDLHIFNDKGVLSRRIVMKFDGLKMTEALNYDGAGRMWLRVV
Ga0307412_109995192	3300031911	Rhizosphere	MKTLKVVVLLALMSVVGHAQRSDADATYALKGPVRTLKVEVATFVSNVGDYVEGPRIVQMEALFNQDGNRTDLHIFNDKGVLSRRIV
Ga0307415_1008991393	3300032126	Rhizosphere	MKTLKVVVLLALMSVVGHAQRSDADATYALKGPVRTLKVEVATFVSNVGDYVEGPRIVQMEALFNQDGNRTDLHIYNDKGVLSRRIVMKFDGLKMTEALNYDGAG
Ga0310889_107773221	3300032179	Soil	MKTLKIVVLVALMSLVAQAQDRSDADATYALKGPVRTFKVEGATFVLKDGEYVEGPRVAQMEASFNEDGNRTDLLMYNDKGVLSRRIVMKFDGRKMTEAFNY
Ga0310896_103096191	3300032211	Soil	MKTLKIVVLVALMSLVAQAQDRSDADATYALKGPVRTFKVEGATFVLKDGEYVEGPRVAQMEASFNEDGNRTDLLMYNDKGVLSRRIVMKFDGRKMTEAFNYDGGGRMWLRIVNVY

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F073993

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences