NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F073958

Metagenome / Metatranscriptome Family F073958

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F073958
Family Type Metagenome / Metatranscriptome
Number of Sequences 120
Average Sequence Length 47 residues
Representative Sequence MRTSLLMRTLIVMLALEWELGNQDPVVFCYRIGVEPARVFLGRFGKRR
Number of Associated Samples 82
Number of Associated Scaffolds 120

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 84.87 %
% of genes near scaffold ends (potentially truncated) 15.83 %
% of genes from short scaffolds (< 2000 bps) 60.83 %
Associated GOLD sequencing projects 71
AlphaFold2 3D model prediction Yes
3D model pTM-score0.36

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (90.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(24.167 % of family members)
Environment Ontology (ENVO) Unclassified
(25.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(67.500 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: Yes Secondary Structure distribution: α-helix: 51.32%    β-sheet: 0.00%    Coil/Unstructured: 48.68%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.36
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 120 Family Scaffolds
PF01734Patatin 31.67
PF09335SNARE_assoc 25.00
PF13419HAD_2 10.00
PF01966HD 1.67
PF01070FMN_dh 1.67
PF13581HATPase_c_2 0.83
PF07690MFS_1 0.83
PF13420Acetyltransf_4 0.83
PF02698DUF218 0.83
PF02602HEM4 0.83
PF01292Ni_hydr_CYTB 0.83
PF00324AA_permease 0.83
PF00474SSF 0.83
PF08447PAS_3 0.83
PF07732Cu-oxidase_3 0.83
PF08282Hydrolase_3 0.83
PF04519Bactofilin 0.83

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 120 Family Scaffolds
COG1752Predicted acylesterase/phospholipase RssA, containd patatin domainGeneral function prediction only [R] 31.67
COG3621Patatin-like phospholipase/acyl hydrolase, includes sporulation protein CotRGeneral function prediction only [R] 31.67
COG4667Predicted phospholipase, patatin/cPLA2 familyLipid transport and metabolism [I] 31.67
COG0398Uncharacterized membrane protein YdjX, related to fungal oxalate transporter, TVP38/TMEM64 familyFunction unknown [S] 25.00
COG0586Membrane integrity protein DedA, putative transporter, DedA/Tvp38 familyCell wall/membrane/envelope biogenesis [M] 25.00
COG1238Uncharacterized membrane protein YqaA, VTT domainFunction unknown [S] 25.00
COG0069Glutamate synthase domain 2Amino acid transport and metabolism [E] 1.67
COG1304FMN-dependent dehydrogenase, includes L-lactate dehydrogenase and type II isopentenyl diphosphate isomeraseEnergy production and conversion [C] 1.67
COG0531Serine transporter YbeC, amino acid:H+ symporter familyAmino acid transport and metabolism [E] 0.83
COG0560Phosphoserine phosphataseAmino acid transport and metabolism [E] 0.83
COG0561Hydroxymethylpyrimidine pyrophosphatase and other HAD family phosphatasesCoenzyme transport and metabolism [H] 0.83
COG0833Amino acid permeaseAmino acid transport and metabolism [E] 0.83
COG1113L-asparagine transporter or related permeaseAmino acid transport and metabolism [E] 0.83
COG1115Na+/alanine symporterAmino acid transport and metabolism [E] 0.83
COG1434Lipid carrier protein ElyC involved in cell wall biogenesis, DUF218 familyCell wall/membrane/envelope biogenesis [M] 0.83
COG1587Uroporphyrinogen-III synthaseCoenzyme transport and metabolism [H] 0.83
COG1664Cytoskeletal protein CcmA, bactofilin familyCytoskeleton [Z] 0.83
COG1877Trehalose-6-phosphate phosphataseCarbohydrate transport and metabolism [G] 0.83
COG1969Ni,Fe-hydrogenase I cytochrome b subunitEnergy production and conversion [C] 0.83
COG2132Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA)Cell cycle control, cell division, chromosome partitioning [D] 0.83
COG2217Cation-transporting P-type ATPaseInorganic ion transport and metabolism [P] 0.83
COG2864Cytochrome b subunit of formate dehydrogenaseEnergy production and conversion [C] 0.83
COG2949Uncharacterized periplasmic protein SanA, affects membrane permeability for vancomycinCell wall/membrane/envelope biogenesis [M] 0.83
COG3038Cytochrome b561Energy production and conversion [C] 0.83
COG3658Cytochrome b subunit of Ni2+-dependent hydrogenaseEnergy production and conversion [C] 0.83
COG3769Mannosyl-3-phosphoglycerate phosphatase YedP/MpgP, HAD superfamilyCarbohydrate transport and metabolism [G] 0.83
COG4117Thiosulfate reductase cytochrome b subunitInorganic ion transport and metabolism [P] 0.83


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms90.00 %
UnclassifiedrootN/A10.00 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000567|JGI12270J11330_10123866All Organisms → cellular organisms → Bacteria1044Open in IMG/M
3300004091|Ga0062387_101022626All Organisms → cellular organisms → Bacteria635Open in IMG/M
3300004092|Ga0062389_100119488All Organisms → cellular organisms → Bacteria2394Open in IMG/M
3300005435|Ga0070714_100649776All Organisms → cellular organisms → Bacteria1015Open in IMG/M
3300005533|Ga0070734_10010360All Organisms → cellular organisms → Bacteria6924Open in IMG/M
3300005538|Ga0070731_10029270All Organisms → cellular organisms → Bacteria3738Open in IMG/M
3300005541|Ga0070733_10223099Not Available1236Open in IMG/M
3300005542|Ga0070732_10048460All Organisms → cellular organisms → Bacteria2451Open in IMG/M
3300005921|Ga0070766_10015464All Organisms → cellular organisms → Bacteria3978Open in IMG/M
3300005921|Ga0070766_10936569All Organisms → cellular organisms → Bacteria594Open in IMG/M
3300006041|Ga0075023_100275393All Organisms → cellular organisms → Bacteria683Open in IMG/M
3300006050|Ga0075028_100007270All Organisms → cellular organisms → Bacteria4411Open in IMG/M
3300006050|Ga0075028_100032218All Organisms → cellular organisms → Bacteria2411Open in IMG/M
3300006162|Ga0075030_100096781All Organisms → cellular organisms → Bacteria2410Open in IMG/M
3300006172|Ga0075018_10669135All Organisms → cellular organisms → Bacteria558Open in IMG/M
3300006354|Ga0075021_10064355All Organisms → cellular organisms → Bacteria2137Open in IMG/M
3300006638|Ga0075522_10022112All Organisms → cellular organisms → Bacteria3987Open in IMG/M
3300006638|Ga0075522_10308935All Organisms → cellular organisms → Bacteria765Open in IMG/M
3300009029|Ga0066793_10347174All Organisms → cellular organisms → Bacteria855Open in IMG/M
3300009029|Ga0066793_10861861All Organisms → cellular organisms → Bacteria → Acidobacteria513Open in IMG/M
3300009524|Ga0116225_1003891All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium9436Open in IMG/M
3300009698|Ga0116216_10895253All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium531Open in IMG/M
3300010361|Ga0126378_10008338All Organisms → cellular organisms → Bacteria8304Open in IMG/M
3300010376|Ga0126381_103037131All Organisms → cellular organisms → Bacteria666Open in IMG/M
3300010379|Ga0136449_100016512All Organisms → cellular organisms → Bacteria → Acidobacteria19419Open in IMG/M
3300010379|Ga0136449_100168259All Organisms → cellular organisms → Bacteria4250Open in IMG/M
3300010379|Ga0136449_100644702All Organisms → cellular organisms → Bacteria1792Open in IMG/M
3300010379|Ga0136449_101936442All Organisms → cellular organisms → Bacteria874Open in IMG/M
3300010379|Ga0136449_103957717All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium554Open in IMG/M
3300012189|Ga0137388_11149548All Organisms → cellular organisms → Bacteria713Open in IMG/M
3300014159|Ga0181530_10192032All Organisms → cellular organisms → Bacteria1130Open in IMG/M
3300014495|Ga0182015_10767565Not Available606Open in IMG/M
3300014501|Ga0182024_10073635All Organisms → cellular organisms → Bacteria5149Open in IMG/M
3300014501|Ga0182024_10272293All Organisms → cellular organisms → Bacteria2255Open in IMG/M
3300014501|Ga0182024_12180643All Organisms → cellular organisms → Bacteria → Acidobacteria607Open in IMG/M
3300017823|Ga0187818_10133877All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1076Open in IMG/M
3300017927|Ga0187824_10001574All Organisms → cellular organisms → Bacteria5731Open in IMG/M
3300017927|Ga0187824_10054947Not Available1232Open in IMG/M
3300017927|Ga0187824_10379355All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium513Open in IMG/M
3300017930|Ga0187825_10009161All Organisms → cellular organisms → Bacteria3313Open in IMG/M
3300017936|Ga0187821_10151240Not Available877Open in IMG/M
3300017975|Ga0187782_11110077All Organisms → cellular organisms → Bacteria617Open in IMG/M
3300019786|Ga0182025_1273325All Organisms → cellular organisms → Bacteria2660Open in IMG/M
3300020579|Ga0210407_10000221All Organisms → cellular organisms → Bacteria71064Open in IMG/M
3300020580|Ga0210403_10004380All Organisms → cellular organisms → Bacteria12199Open in IMG/M
3300020580|Ga0210403_10232606All Organisms → cellular organisms → Bacteria1512Open in IMG/M
3300020581|Ga0210399_10170274All Organisms → cellular organisms → Bacteria1806Open in IMG/M
3300020581|Ga0210399_10516046All Organisms → cellular organisms → Bacteria993Open in IMG/M
3300020581|Ga0210399_11335631All Organisms → cellular organisms → Bacteria563Open in IMG/M
3300020582|Ga0210395_11037014All Organisms → cellular organisms → Bacteria → Acidobacteria607Open in IMG/M
3300020583|Ga0210401_10000321All Organisms → cellular organisms → Bacteria58933Open in IMG/M
3300021088|Ga0210404_10029915All Organisms → cellular organisms → Bacteria → Acidobacteria2427Open in IMG/M
3300021088|Ga0210404_10571194All Organisms → cellular organisms → Bacteria → Acidobacteria642Open in IMG/M
3300021180|Ga0210396_10071895All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium3148Open in IMG/M
3300021181|Ga0210388_11439677All Organisms → cellular organisms → Bacteria → Acidobacteria577Open in IMG/M
3300021402|Ga0210385_10876179All Organisms → cellular organisms → Bacteria689Open in IMG/M
3300021406|Ga0210386_10330369Not Available1309Open in IMG/M
3300021407|Ga0210383_10942419All Organisms → cellular organisms → Bacteria → Acidobacteria734Open in IMG/M
3300021407|Ga0210383_11285399All Organisms → cellular organisms → Bacteria → Acidobacteria612Open in IMG/M
3300021420|Ga0210394_10003091All Organisms → cellular organisms → Bacteria21563Open in IMG/M
3300021420|Ga0210394_10011299All Organisms → cellular organisms → Bacteria8784Open in IMG/M
3300021420|Ga0210394_10319918All Organisms → cellular organisms → Bacteria1362Open in IMG/M
3300021432|Ga0210384_10000070All Organisms → cellular organisms → Bacteria148628Open in IMG/M
3300021477|Ga0210398_10001028All Organisms → cellular organisms → Bacteria29955Open in IMG/M
3300021477|Ga0210398_11146501All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium616Open in IMG/M
3300021479|Ga0210410_10027909All Organisms → cellular organisms → Bacteria4883Open in IMG/M
3300021479|Ga0210410_11300221All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium620Open in IMG/M
3300021559|Ga0210409_10003862All Organisms → cellular organisms → Bacteria16462Open in IMG/M
3300021559|Ga0210409_10009555All Organisms → cellular organisms → Bacteria9811Open in IMG/M
3300021559|Ga0210409_10011237All Organisms → cellular organisms → Bacteria8962Open in IMG/M
3300021560|Ga0126371_10477949All Organisms → cellular organisms → Bacteria1393Open in IMG/M
3300021860|Ga0213851_1086067All Organisms → cellular organisms → Bacteria708Open in IMG/M
3300021861|Ga0213853_10639156All Organisms → cellular organisms → Bacteria671Open in IMG/M
3300021861|Ga0213853_11297439All Organisms → cellular organisms → Bacteria1185Open in IMG/M
3300022722|Ga0242657_1092282Not Available734Open in IMG/M
3300024227|Ga0228598_1005060All Organisms → cellular organisms → Bacteria2771Open in IMG/M
3300025929|Ga0207664_10404443All Organisms → cellular organisms → Bacteria1215Open in IMG/M
3300027570|Ga0208043_1054627All Organisms → cellular organisms → Bacteria → Acidobacteria1159Open in IMG/M
3300027625|Ga0208044_1136228All Organisms → cellular organisms → Bacteria690Open in IMG/M
3300027674|Ga0209118_1128953All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium704Open in IMG/M
3300027783|Ga0209448_10178714All Organisms → cellular organisms → Bacteria706Open in IMG/M
3300027826|Ga0209060_10034562All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 832518Open in IMG/M
3300027854|Ga0209517_10259870All Organisms → cellular organisms → Bacteria1034Open in IMG/M
3300027869|Ga0209579_10177878All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1138Open in IMG/M
3300027884|Ga0209275_10278373Not Available924Open in IMG/M
3300027889|Ga0209380_10000856All Organisms → cellular organisms → Bacteria21393Open in IMG/M
3300027889|Ga0209380_10546393All Organisms → cellular organisms → Bacteria673Open in IMG/M
3300027894|Ga0209068_10302072All Organisms → cellular organisms → Bacteria899Open in IMG/M
3300027905|Ga0209415_10199361All Organisms → cellular organisms → Bacteria1893Open in IMG/M
3300027905|Ga0209415_10629431All Organisms → cellular organisms → Bacteria787Open in IMG/M
3300027905|Ga0209415_10769472All Organisms → cellular organisms → Bacteria → Acidobacteria676Open in IMG/M
3300027908|Ga0209006_10995329Not Available667Open in IMG/M
3300027910|Ga0209583_10107233All Organisms → cellular organisms → Bacteria1086Open in IMG/M
3300027911|Ga0209698_10253366All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1405Open in IMG/M
3300028792|Ga0307504_10036985All Organisms → cellular organisms → Bacteria1327Open in IMG/M
3300029999|Ga0311339_10585354All Organisms → cellular organisms → Bacteria1115Open in IMG/M
3300031090|Ga0265760_10237855Not Available626Open in IMG/M
3300031231|Ga0170824_110852196All Organisms → cellular organisms → Bacteria932Open in IMG/M
3300031234|Ga0302325_10336336All Organisms → cellular organisms → Bacteria2413Open in IMG/M
3300031234|Ga0302325_11336769All Organisms → cellular organisms → Bacteria939Open in IMG/M
3300031234|Ga0302325_12103340All Organisms → cellular organisms → Bacteria691Open in IMG/M
3300031236|Ga0302324_100025530All Organisms → cellular organisms → Bacteria11333Open in IMG/M
3300031236|Ga0302324_100073485All Organisms → cellular organisms → Bacteria → Acidobacteria5955Open in IMG/M
3300031525|Ga0302326_10838734All Organisms → cellular organisms → Bacteria1318Open in IMG/M
3300031708|Ga0310686_106092054All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium3622Open in IMG/M
3300031708|Ga0310686_107520916All Organisms → cellular organisms → Bacteria755Open in IMG/M
3300031708|Ga0310686_108962043All Organisms → cellular organisms → Bacteria2482Open in IMG/M
3300031708|Ga0310686_109484971All Organisms → cellular organisms → Bacteria7105Open in IMG/M
3300031715|Ga0307476_10026248All Organisms → cellular organisms → Bacteria3835Open in IMG/M
3300031823|Ga0307478_10000398All Organisms → cellular organisms → Bacteria46232Open in IMG/M
3300032160|Ga0311301_10003238All Organisms → cellular organisms → Bacteria60345Open in IMG/M
3300032160|Ga0311301_10238939All Organisms → cellular organisms → Bacteria3021Open in IMG/M
3300032160|Ga0311301_11502218All Organisms → cellular organisms → Bacteria830Open in IMG/M
3300032770|Ga0335085_10002041All Organisms → cellular organisms → Bacteria39325Open in IMG/M
3300032770|Ga0335085_10408499All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1574Open in IMG/M
3300032783|Ga0335079_11224415Not Available754Open in IMG/M
3300032783|Ga0335079_11498482All Organisms → cellular organisms → Bacteria → Acidobacteria666Open in IMG/M
3300033480|Ga0316620_11640381All Organisms → cellular organisms → Bacteria637Open in IMG/M
3300034282|Ga0370492_0145572Not Available969Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil24.17%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil14.17%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds7.50%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa5.83%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment5.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil5.00%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil5.00%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil4.17%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil4.17%
PermafrostEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost3.33%
WatershedsEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds2.50%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil2.50%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil2.50%
Arctic Peat SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil1.67%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.67%
Prmafrost SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil1.67%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil1.67%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil1.67%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog0.83%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil0.83%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.83%
Untreated Peat SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil0.83%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland0.83%
PalsaEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa0.83%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.83%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000567Peat soil microbial communities from Weissenstadt, Germany - SII-2010EnvironmentalOpen in IMG/M
3300004091Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300004092Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300005435Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaGEnvironmentalOpen in IMG/M
3300005533Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1EnvironmentalOpen in IMG/M
3300005538Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1EnvironmentalOpen in IMG/M
3300005541Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1EnvironmentalOpen in IMG/M
3300005542Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1EnvironmentalOpen in IMG/M
3300005921Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6EnvironmentalOpen in IMG/M
3300006041Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014EnvironmentalOpen in IMG/M
3300006050Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014EnvironmentalOpen in IMG/M
3300006162Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012EnvironmentalOpen in IMG/M
3300006172Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014EnvironmentalOpen in IMG/M
3300006354Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012EnvironmentalOpen in IMG/M
3300006638Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-AEnvironmentalOpen in IMG/M
3300009029Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189EnvironmentalOpen in IMG/M
3300009524Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaGEnvironmentalOpen in IMG/M
3300009698Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaGEnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300010379Sb_50d combined assemblyEnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300014159Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_60_metaGEnvironmentalOpen in IMG/M
3300014495Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaGEnvironmentalOpen in IMG/M
3300014501Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300017823Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3EnvironmentalOpen in IMG/M
3300017927Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4EnvironmentalOpen in IMG/M
3300017930Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5EnvironmentalOpen in IMG/M
3300017936Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1EnvironmentalOpen in IMG/M
3300017975Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300019786Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (PacBio error correction)EnvironmentalOpen in IMG/M
3300020579Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-MEnvironmentalOpen in IMG/M
3300020580Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-MEnvironmentalOpen in IMG/M
3300020581Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-MEnvironmentalOpen in IMG/M
3300020582Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-OEnvironmentalOpen in IMG/M
3300020583Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-MEnvironmentalOpen in IMG/M
3300021088Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-MEnvironmentalOpen in IMG/M
3300021180Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-OEnvironmentalOpen in IMG/M
3300021181Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-OEnvironmentalOpen in IMG/M
3300021402Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-OEnvironmentalOpen in IMG/M
3300021406Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-OEnvironmentalOpen in IMG/M
3300021407Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-OEnvironmentalOpen in IMG/M
3300021420Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-MEnvironmentalOpen in IMG/M
3300021432Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-MEnvironmentalOpen in IMG/M
3300021477Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-OEnvironmentalOpen in IMG/M
3300021479Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-MEnvironmentalOpen in IMG/M
3300021559Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-MEnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300021860Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2014 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300021861Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2016 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300022722Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300024227Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4Host-AssociatedOpen in IMG/M
3300025929Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027570Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027625Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027674Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027783Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)EnvironmentalOpen in IMG/M
3300027826Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027854Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)EnvironmentalOpen in IMG/M
3300027869Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027884Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)EnvironmentalOpen in IMG/M
3300027889Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)EnvironmentalOpen in IMG/M
3300027894Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)EnvironmentalOpen in IMG/M
3300027905Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)EnvironmentalOpen in IMG/M
3300027908Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300027910Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)EnvironmentalOpen in IMG/M
3300027911Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)EnvironmentalOpen in IMG/M
3300028792Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_SEnvironmentalOpen in IMG/M
3300029999I_Palsa_E3 coassemblyEnvironmentalOpen in IMG/M
3300031090Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031234Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2EnvironmentalOpen in IMG/M
3300031236Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1EnvironmentalOpen in IMG/M
3300031525Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3EnvironmentalOpen in IMG/M
3300031708FICUS49499 Metagenome Czech Republic combined assemblyEnvironmentalOpen in IMG/M
3300031715Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05EnvironmentalOpen in IMG/M
3300031823Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05EnvironmentalOpen in IMG/M
3300032160Sb_50d combined assembly (MetaSPAdes)EnvironmentalOpen in IMG/M
3300032770Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5EnvironmentalOpen in IMG/M
3300032783Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3EnvironmentalOpen in IMG/M
3300033480Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D5_BEnvironmentalOpen in IMG/M
3300034282Peat soil microbial communities from wetlands in Alaska, United States - Eight_mile_03D_16EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI12270J11330_1012386623300000567Peatlands SoilMKTSLLMRTLIVMLALEWELGNQDPFVFCYRIGVEPARVFFGRFGKPR*
Ga0062387_10102262623300004091Bog Forest SoilMKTTLLMRTLIVMLALEWELGNQDPVVFCYRIGVEPARVFLGRFGKRR*
Ga0062389_10011948823300004092Bog Forest SoilMKTARLMRTLIVMLALEWQLGQEDPVVFCYRIGVQPARDLLGRFSRQR*
Ga0070714_10064977623300005435Agricultural SoilMKTSTFMRTLIAILALEWELGSQDPFIFCYRIGVEPARVFFGRFGKRRQSE*
Ga0070734_1001036083300005533Surface SoilMKTSLLLRTLVVILALEWDNASQDPVVFCYRIGMEPARAFVGRFGWLR*
Ga0070731_1002927023300005538Surface SoilMRASLMMRTLVVMLALEWELCNQDPFVFCYRMGVEPARVFVGRFAKRL*
Ga0070733_1022309923300005541Surface SoilMRTSLLMRTLIVRLALEWELCSQDPVVFCYRMGVEPARVFLGRFSTRG*
Ga0070732_1004846033300005542Surface SoilMRASLLMRTLIVMLALEWELGNQDPVVFCYRIGVEPARVFLGRFGKRR*
Ga0070766_1001546453300005921SoilMKTPLLMRTFIVMLALEWELCSQDPFVFCYRMTVEPACDFLGRFGARG*
Ga0070766_1093656923300005921SoilMRTPFVTRTLIIMLALEWELCGQDPFVFCYRMGVEPARVFLGRFAKRR*
Ga0075023_10027539323300006041WatershedsMRTSLLMRTLIVMLALEWELGNQDPVVFCYRIGVEPARIFLGRFGKRR*
Ga0075028_10000727043300006050WatershedsMKAPLLMRTFIVMLALEWELCSQDPFVFCYRITVEPAREFLGRFGARR*
Ga0075028_10003221823300006050WatershedsMRASLLMRTLIVMLALEWELGNQDPVVFCYRIGVEPARIFLGRFGKRR*
Ga0075030_10009678153300006162WatershedsVNPSTLVRTLIAILALEWELGSQDPVVFCYRVGVQPARVYLGKLAKRR*
Ga0075018_1066913523300006172WatershedsMKASAFAKTLIAILVLEWELGSQDPFVFCYRISVAPARIFLERFGKHR*
Ga0075021_1006435523300006354WatershedsMRTSLLMRTLIVMLALEWELGNQDPVVFCYRIGVEPARVFLGRFGKRR*
Ga0075522_1002211253300006638Arctic Peat SoilMIRTLIVILALEWELGSQDPVIFCYRIGVKPARAFLGRSCKLC*
Ga0075522_1030893523300006638Arctic Peat SoilMKTSTFMRALIAVLALEWELGSQDPVIFCYRIGVEPARVILGRLGKRRQSE*
Ga0066793_1034717423300009029Prmafrost SoilMRTSDLLRTIIVVFALEWEICSQDPFIFCYRIGGEPVRVFLGRFGKPQ*
Ga0066793_1086186113300009029Prmafrost SoilIMRTSDLLRTFIVLFALEWEICSQDPFVFCYRMGVEPVRVFLGRFGKTQ*
Ga0116225_100389153300009524Peatlands SoilMRTTLLMRTLIVMLALEWELGNQDPFVFCYRIGVEPARVFFGRFGKPR*
Ga0116216_1089525313300009698Peatlands SoilMRTSLLMRTLIVMLALEWELGNQDPFIFCYRIGVEPARVFLGRFGKRR*
Ga0126378_1000833853300010361Tropical Forest SoilMRAPLFLRTVICMLALEWELCSQDPFVFCYRIGVEPARVFLGRFGKRR*
Ga0126381_10303713123300010376Tropical Forest SoilMRTSLFVRTLVVMLALEWELCNEDPVIFCYRMGMEPARVFFARFVAGRR*
Ga0136449_100016512113300010379Peatlands SoilMRTSPLMRTLIVMLALEWELCSQDPVVFCYRIGVEPARVFFGRFGMRR*
Ga0136449_10016825913300010379Peatlands SoilMRTTLLMRTLIVMLALEWELGNQDPFIFCYRIGVEPARIFLGRFGKRR*
Ga0136449_10064470223300010379Peatlands SoilMRASLVMRTLIVMLALEWELCSQDPFVFCYRMGVEPARDFLGSFAKRR*
Ga0136449_10193644223300010379Peatlands SoilMKTSLMMRTFVVMLALEWELCSQDPFVFCYRMGVGPARIFLGRYAKRW*
Ga0136449_10395771713300010379Peatlands SoilMRASLLMRTLIVMSALEWELGNQDPVVFCYRIGVEPVRVFLGRFGKRR*
Ga0137388_1114954823300012189Vadose Zone SoilMTTPHLLRTLIVMLAMEWELCSQDPFIFCYRMAVEPVGIFIGRFGQPR*
Ga0181530_1019203223300014159BogMSVSHLVQTLVVTLAMEWELCSEDPFIFCYRIGVEPVCVFFARAGLFQK
Ga0182015_1076756523300014495PalsaMKASQLMRTLIVMLALEWELCSEDPVVFCYRNGVEPMRVFLGRFSQSR*
Ga0182024_1007363523300014501PermafrostMMRTLIVILALEWELGSQDPVVFCYRMGVKPARVFLGRLRRGR*
Ga0182024_1027229343300014501PermafrostMRTSLVTRTLIIMLALEWELCGQDPFVFCYRMGVEPARVFFGRFAKRR*
Ga0182024_1218064323300014501PermafrostMKTTLLMRTLIVMLALEWELGNQDPVIFCYRIGVEPARIFPGRFGKRR*
Ga0187818_1013387723300017823Freshwater SedimentMRTTLLMRTLIVMLALEWELGNQDPVIFCYRIGVEPARVFLGRFGKRR
Ga0187824_1000157463300017927Freshwater SedimentMKTSLLMRTLIVMLALEWELGNQDPFIFCYRIGVEPARVFLGRYGKRR
Ga0187824_1005494723300017927Freshwater SedimentMKTAWKTSALMQTLIVMLALEWELGSQDPFVFCYRIGVEPARVFLGRFARRR
Ga0187824_1037935523300017927Freshwater SedimentMSTPQLLRTLIVVLALEWEVCSQDPFIFCYRIGVEPVRVFLWRFGKPQ
Ga0187825_1000916123300017930Freshwater SedimentMKAPLLMRAFIVMLALEWELCSQDPFVFCYRITVEPAREFLGRFGARG
Ga0187821_1015124023300017936Freshwater SedimentMKTSTMMRTLVVMLALEWELGNQDPFIFCYRIGMEPARVFLGRLGWSR
Ga0187782_1111007723300017975Tropical PeatlandMVRTLVVILALEWELGSQDPVVFCYRIAMEPARVFLGKFGKRL
Ga0182025_127332543300019786PermafrostMRTSLVTRTLIIMLALEWELCGQDPFVFCYRMGVEPARVFFGRFAKRR
Ga0210407_10000221413300020579SoilMRTSLVLRTLLVMLAMEWELCSEDPVIFCYRVGVEPARVFLGRFGKRR
Ga0210403_1000438043300020580SoilMRTSLVLRTLLVMLAMEWELCSEDPFVFCYRVGVEPARVFLGRFGKRR
Ga0210403_1023260623300020580SoilMRTSLLLRTLLVMLAMEWELCSEDPVVFCYRVGVEPVRVFLGRFAKQR
Ga0210399_1017027443300020581SoilMRASLLMRTLIVMLALEWDLGSQDPVVFCYRIGAEPARVFF
Ga0210399_1051604623300020581SoilMKTSLLMRTLIVMLALEWELGNQDPVIFCYRIGVEPARVFLGRFGKRR
Ga0210399_1133563123300020581SoilMRSSTMMRTLVVMLALEWELGNQDPFVFCYRIGVQPARVFLGRLGWSR
Ga0210395_1103701413300020582SoilRTSLVLRTLLVMLAMEWELCSEDPFVFCYRVGVEPVRVFLGRFAKQR
Ga0210401_10000321333300020583SoilMRTSPIMRALIVMLALEWELCSQDPCVFCYRIVVEPAREFLGRFSRRR
Ga0210404_1002991523300021088SoilMRTPLLMRTFIVMLALEWELCSQDPFVFCYRITVEPARDFLERFGARG
Ga0210404_1057119413300021088SoilRSLRPKCTKHMKTSLFARTVVVMLALEWELCNQDPFIFCYRISVEPARIFFGRIGKRR
Ga0210396_1007189523300021180SoilMKTSVFMRTLIVVLALEWELCSQDPVIFCYRIGVEPARVFLGRFGRSR
Ga0210388_1143967723300021181SoilAVRSSTMMRTLVVMLALEWELGNQDPFVFCYRIGVQPARVFLGRLGWSR
Ga0210385_1087617923300021402SoilMKTSVFMRTLIVVLALEWELCSQDPVIFCYRIGVEPARVFLGRFGKRR
Ga0210386_1033036913300021406SoilMRTSPIMRALIVMLALEWELCSQDPCVFCYRIVVEPAREFLGRFSRRRQKHSGCEPYLFT
Ga0210383_1094241913300021407SoilKGVGAVRSSTMMRTLVVMLALEWELGNQDPFVFCYRIGVQPARVFLGRLGWSR
Ga0210383_1128539923300021407SoilSLLMRTLIVMLALEWELGNQDPVIFCYRIGVEPARVFLGRFGKRR
Ga0210394_1000309193300021420SoilMRTSLLLRTLIVMLALEWDLCSQDPVVFCYRVGMEPARVFLGRFGKRR
Ga0210394_1001129933300021420SoilMMRTLVVMLALEWELGNQDPFVFCYRIGVQPARVFLGRLGWSR
Ga0210394_1031991823300021420SoilMKTSIVRTLIVMLALEWELCSQDPVIFCYRVGVEPARVFIGRFRKHR
Ga0210394_1046331423300021420SoilMRTSLVLRTLLVMLAMEWELCSEDPFVFCYRVGVEP
Ga0210384_10000070263300021432SoilMKTPLLMRTFIVMLALEWELCSQDPFVFCYRMTVEPARDFLGRFGARG
Ga0210398_10001028203300021477SoilMRSSTMVRTLVVMLALEWELGNQDPFVFCYRIGVQPARVFLGRLGWSR
Ga0210398_1114650123300021477SoilMVRTLIVILALEWELGSQDPVVFCYRIGVKPARVFLGKFARHH
Ga0210410_1002790923300021479SoilMRTSLVLRTLLVMLAMEWELCSEDPVVFCYRVGVEPVRVFLGRFGKRS
Ga0210410_1130022113300021479SoilMRTSPIMRALIVMLALEWELCNEDPFIFCYRIGVEPARVFLGRFGKRR
Ga0210409_10003862103300021559SoilMKAPLLMRTFIVMLALEWELCSQDPFVFCYRITVEPAREFLGRFGARR
Ga0210409_10009555103300021559SoilMRTLIVMLALEWELCSQDPIVFCYRIGVEPARVFFGRFGMRR
Ga0210409_1001123733300021559SoilMRASLMMRTLIVRLAVEWELCSQDPFVFCYRIGVEPARVFLGRFGTRR
Ga0126371_1047794923300021560Tropical Forest SoilMRTSLFVRTLVVMLALEWELCNEDPVIFCYRMGMEPARVFFARFVAGRR
Ga0213851_108606723300021860WatershedsMRASLLMRTLIVMLALEWELGNQDPVVFCYRIGVEPARVFLGRFGKRR
Ga0213853_1063915623300021861WatershedsMRASLLMRTLIVMLALEWELGNQDPVVFCYRIGVEPARVFLG
Ga0213853_1129743923300021861WatershedsMRASLLMRTLIVMLALEWELGNQDPVVFCYRIGVEPARIFLGRFGKRR
Ga0242657_109228223300022722SoilMRTSLVLRTLLVMLAMEWELCSEDPVIFCYRVGVEPARVFLGRFGKR
Ga0228598_100506023300024227RhizosphereMKTSLLMRTLIIMLALEWELGSQDPFVFCYRIAVEPARVFLGRFGKRR
Ga0207664_1040444323300025929Agricultural SoilMKTSTFMRTLIAILALEWELGSQDPFIFCYRIGVEPARVFFGRFGKRRQSE
Ga0208043_105462723300027570Peatlands SoilMKTSLLMRTLIVMLALEWELGNQDPFVFCYRIGVEPARVFFGRFGKPR
Ga0208044_113622823300027625Peatlands SoilMRTTLLMRTLIVMLALEWELCSQDPFVFCYRIGVEPARVFFGRFGKPR
Ga0209118_112895323300027674Forest SoilMRTSLLMRTLIVMLALEWELGNQDPVIFCYRIGVEPARVFLGRFGKRR
Ga0209448_1017871423300027783Bog Forest SoilMKTTLLMRTLIVMLALEWELGNQDPVVFCYRIGVEPARVFLGRFGKRR
Ga0209060_1003456213300027826Surface SoilMKTSLLLRTLVVILALEWDNASQDPVVFCYRIGMEPARAFVGRFGWLR
Ga0209517_1025987023300027854Peatlands SoilMRASLVMRTLIVMLALEWELCSQDPFVFCYRMGVEPARDFLGSFAKRR
Ga0209579_1017787823300027869Surface SoilMMRTLVVMLALEWELCNQDPFVFCYRMGVEPARVFVGRFAKRL
Ga0209275_1027837323300027884SoilMKTSVFMRTLIVVLALEWELCSQDPVIFCYRIGVEPARVFLGRFGRS
Ga0209380_10000856173300027889SoilMRTPLLMRTFIVMLALEWELCSQDPFVFCYRMTVEPACDFLGRFGARG
Ga0209380_1054639323300027889SoilMRTPFVTRTLIIMLALEWELCGQDPFVFCYRMGVEPARVFLGRFAKRR
Ga0209068_1030207213300027894WatershedsMRTSLLMRTLIVMLALEWELGNQDPVVFCYRIGVEPARVFLGRFGKRR
Ga0209415_1019936113300027905Peatlands SoilMRTSPLMRTLIVMLALEWELCSQDPVVFCYRIGVEPARVFF
Ga0209415_1062943123300027905Peatlands SoilMRTSLLMRTLIVMLALEWELGNQDPFIFCYRIGVEPARVFLGRFGKRR
Ga0209415_1076947213300027905Peatlands SoilRTLIVMLALEWELGNQDPVVFCYRIGVEPARAFLGRFGKRR
Ga0209006_1099532923300027908Forest SoilMRNLIAILALEWELGSQDPVIFCYRIGVEPARVFLGRFGKRRHSE
Ga0209583_1010723313300027910WatershedsMRTSLLMRTLIVMLALEWELGNQDPVVFCYRIGVEPARIFLGRFGKRR
Ga0209698_1025336633300027911WatershedsMRTSLLMRTLIVMLALEWELCSQDPVVFCYRMGVEPAREFLGRFGTRR
Ga0307504_1003698523300028792SoilMRTSQLVRTLIVILALEWELCSQDPVVFCYRIGVEPARVFLGRFGKIR
Ga0311339_1058535423300029999PalsaMRTSRLVRTVIVMLALEWELCSEDPFIFCYRIGVEPVRDYIGKFGQPR
Ga0265760_1023785513300031090SoilMRTSFMTRTLIIMFALEWELCGQDPFVFCYRMGVEPARVFLGRFAKRR
Ga0170824_11085219633300031231Forest SoilTLIAMLALEWELGSQDPVVFCYRIGVQPARVFFGKLAKRR
Ga0302325_1033633643300031234PalsaMKASQLMRTLIVMLALEWELCSEDPVVFCYRNGVEPMRVFLGRFSQSR
Ga0302325_1133676913300031234PalsaMRASHLPRTLIVMLALEWELCHEDPFIFCYRMGVEPVRVFLGRFGKRR
Ga0302325_1210334023300031234PalsaMRASHLPRTLIVMLALEWELCHEDPFIFCYRMGVEPVRVFLERF
Ga0302324_10002553093300031236PalsaMVRTLVVILALEWELGSQDPVVFCYRIGVKPARVLLGRWGKRR
Ga0302324_10007348523300031236PalsaMRASHLPRTLIVMLALEWELCHEDPFIFCYRMGVEPVRVFLERFGRRR
Ga0302326_1083873423300031525PalsaMKTARLMRTLIVMLALEWQLGQEDPVVFCYRIGVQPARNLLGRFSRQR
Ga0310686_10609205463300031708SoilMRTSLLMRTLIVMLALEWELCSQDPFVFCYRMGVEPARV
Ga0310686_10752091613300031708SoilMRASLLMRTLIVMLALEWELGNQDPLVFCYRIGVEPARVFLGRFGKRR
Ga0310686_10896204333300031708SoilMRTSPFMRTLIVMLALEWELCSQDPFVFCYRMGVEPARVFFGRFGMRR
Ga0310686_10948497173300031708SoilMRTSFMTRTLIIMLALEWELCGQDPFVFCYRMGVEPARVFLGRFAKRR
Ga0307476_1002624833300031715Hardwood Forest SoilVRTSLFLRTVICILAVEWELCSQDPFIFCYRVGVEPARVFLGRFGKHQ
Ga0307478_10000398373300031823Hardwood Forest SoilVRTSLFLRTVICILAVEWELCSQDPFIFCYRMGVEPARVFLGRFGKHQ
Ga0311301_10003238473300032160Peatlands SoilMRTSPLMRTLIVMLALEWELCSQDPVVFCYRIGVEPARVFFGRFGMRR
Ga0311301_1023893923300032160Peatlands SoilMRTLIVMLALEWELGNQDPFIFCYRIGVEPARVFLGRFGKRR
Ga0311301_1150221823300032160Peatlands SoilMKTSLMMRTFVVMLALEWELCSQDPFVFCYRMGVGPARIFLGRYAKRW
Ga0335085_10002041123300032770SoilMRPGHLVRTFIVILALEWELCSEDPCVFCYRMGVEPARVFLGRFGKRR
Ga0335085_1040849923300032770SoilMKTSVLLQTIVVMWAFEWELCSQDPFIFCYRISLEPVRVFVGRFGQRR
Ga0335079_1122441513300032783SoilMVRTLVVILALEWELGSQDPVVFCYRIGVQPARVLLGRWGKRR
Ga0335079_1149848223300032783SoilTLVVILALEWELGSQDPVVFCYRIGVQPARVLLGRWGKRR
Ga0316620_1164038123300033480SoilMRTSLLMRTLIVMLALEWEVCSQDPFIFCYRIGVEPVRVFLGRFGKRR
Ga0370492_0145572_118_2493300034282Untreated Peat SoilMMRTLIVMLALEWQLGREDPFIFCYRITVEPARVLLSRFGKLR


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.