Metagenome / Metatranscriptome Family F073849

Basic Information
Family ID	F073849
Family Type	Metagenome / Metatranscriptome
Number of Sequences	120
Average Sequence Length	71 residues
Representative Sequence	MITQAIDAIFRRWEEHRQRPFWRMVDLFVARIFRGGGDSDAEGLDLGVGLVLTLLAMPGGFVSLLLLNK
Number of Associated Samples	105
Number of Associated Scaffolds	120

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	78.33 %
% of genes near scaffold ends (potentially truncated)	97.50 %
% of genes from short scaffolds (< 2000 bps)	89.17 %
Associated GOLD sequencing projects	96
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.38

Most Common Taxonomy
Group	Unclassified (69.167 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (15.833 % of family members)
Environment Ontology (ENVO)	Unclassified (26.667 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (48.333 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 54.64% β-sheet: 0.00% Coil/Unstructured: 45.36%
Feature Viewer

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Pfam ID	Name	% Frequency in 120 Family Scaffolds
PF00005	ABC_tran	65.00
PF02738	MoCoBD_1	4.17
PF00150	Cellulase	3.33
PF02504	FA_synthesis	0.83
PF02620	YceD	0.83
PF07584	BatA	0.83

COG ID	Name	Functional Category	% Frequency in 120 Family Scaffolds
COG2730	Aryl-phospho-beta-D-glucosidase BglC, GH1 family	Carbohydrate transport and metabolism [G]	3.33
COG3934	Endo-1,4-beta-mannosidase	Carbohydrate transport and metabolism [G]	3.33
COG0416	Acyl-ACP:phosphate acyltransferase (fatty acid/phospholipid biosynthesis)	Lipid transport and metabolism [I]	0.83
COG1399	23S rRNA accumulation protein YceD (essential in plants, uncharacterized in bacteria)	Translation, ribosomal structure and biogenesis [J]	0.83

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.17 %
All Organisms	root	All Organisms	30.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.17 %
cellular organisms	root	All Organisms → cellular organisms	30.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.17 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	30.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.17 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	26.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.17 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	16.67 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	4.17 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.17 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	14.17 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.17 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.17 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	14.17 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.17 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.17 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.17 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.83 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.17 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.17 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.83 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002917\|JGI25616J43925_10236827	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	689	Open in IMG/M
3300005434\|Ga0070709_10397497	Not Available	1028	Open in IMG/M
3300005436\|Ga0070713_101356610	Not Available	689	Open in IMG/M
3300005439\|Ga0070711_101935127	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	518	Open in IMG/M
3300005454\|Ga0066687_10911824	Not Available	524	Open in IMG/M
3300005542\|Ga0070732_10064661	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2126	Open in IMG/M
3300005542\|Ga0070732_10117682	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1572	Open in IMG/M
3300005542\|Ga0070732_10267143	Not Available	1025	Open in IMG/M
3300005602\|Ga0070762_10445216	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	841	Open in IMG/M
3300005610\|Ga0070763_10302133	Not Available	880	Open in IMG/M
3300005764\|Ga0066903_108782200	Not Available	513	Open in IMG/M
3300005921\|Ga0070766_10729067	Not Available	672	Open in IMG/M
3300005993\|Ga0080027_10004628	All Organisms → cellular organisms → Bacteria	5143	Open in IMG/M
3300005995\|Ga0066790_10225497	Not Available	800	Open in IMG/M
3300006034\|Ga0066656_10235491	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1174	Open in IMG/M
3300006059\|Ga0075017_100731107	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	762	Open in IMG/M
3300006086\|Ga0075019_10688006	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	646	Open in IMG/M
3300006102\|Ga0075015_100475292	Not Available	716	Open in IMG/M
3300006175\|Ga0070712_100586463	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	942	Open in IMG/M
3300006800\|Ga0066660_10495108	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1027	Open in IMG/M
3300006806\|Ga0079220_10703413	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	743	Open in IMG/M
3300007982\|Ga0102924_1134796	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1169	Open in IMG/M
3300009616\|Ga0116111_1057191	Not Available	1099	Open in IMG/M
3300009618\|Ga0116127_1117414	Not Available	687	Open in IMG/M
3300010376\|Ga0126381_101363463	Not Available	1025	Open in IMG/M
3300010376\|Ga0126381_101893021	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	860	Open in IMG/M
3300010398\|Ga0126383_11359351	Not Available	800	Open in IMG/M
3300010398\|Ga0126383_13244197	Not Available	531	Open in IMG/M
3300011119\|Ga0105246_12384533	Not Available	519	Open in IMG/M
3300011120\|Ga0150983_10602808	Not Available	554	Open in IMG/M
3300011120\|Ga0150983_16696979	Not Available	537	Open in IMG/M
3300011269\|Ga0137392_10753715	Not Available	805	Open in IMG/M
3300012096\|Ga0137389_10210590	All Organisms → cellular organisms → Bacteria → Acidobacteria	1622	Open in IMG/M
3300012209\|Ga0137379_10081366	All Organisms → cellular organisms → Bacteria → Acidobacteria	3115	Open in IMG/M
3300012209\|Ga0137379_10867100	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	807	Open in IMG/M
3300012356\|Ga0137371_11284173	Not Available	542	Open in IMG/M
3300012357\|Ga0137384_10245047	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1496	Open in IMG/M
3300012924\|Ga0137413_10866975	Not Available	699	Open in IMG/M
3300012988\|Ga0164306_11466182	Not Available	583	Open in IMG/M
3300012989\|Ga0164305_10932647	Not Available	732	Open in IMG/M
3300014052\|Ga0120109_1082964	All Organisms → cellular organisms → Bacteria	736	Open in IMG/M
3300015245\|Ga0137409_10403978	All Organisms → cellular organisms → Bacteria	1182	Open in IMG/M
3300015262\|Ga0182007_10368735	Not Available	543	Open in IMG/M
3300015265\|Ga0182005_1206755	Not Available	592	Open in IMG/M
3300015371\|Ga0132258_13143570	Not Available	1140	Open in IMG/M
3300016294\|Ga0182041_10757173	Not Available	865	Open in IMG/M
3300017936\|Ga0187821_10018258	All Organisms → cellular organisms → Bacteria → Acidobacteria	2433	Open in IMG/M
3300017946\|Ga0187879_10632992	Not Available	595	Open in IMG/M
3300018017\|Ga0187872_10011232	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	5581	Open in IMG/M
3300018034\|Ga0187863_10013188	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5253	Open in IMG/M
3300018468\|Ga0066662_11392428	Not Available	725	Open in IMG/M
3300019882\|Ga0193713_1119929	Not Available	724	Open in IMG/M
3300020579\|Ga0210407_10103641	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2163	Open in IMG/M
3300020580\|Ga0210403_11313111	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	552	Open in IMG/M
3300020581\|Ga0210399_10103819	All Organisms → cellular organisms → Bacteria	2327	Open in IMG/M
3300020581\|Ga0210399_10585526	Not Available	924	Open in IMG/M
3300020581\|Ga0210399_11172533	Not Available	611	Open in IMG/M
3300021180\|Ga0210396_11668444	Not Available	519	Open in IMG/M
3300021401\|Ga0210393_10433384	Not Available	1072	Open in IMG/M
3300021401\|Ga0210393_10836907	Not Available	748	Open in IMG/M
3300021404\|Ga0210389_10835109	Not Available	719	Open in IMG/M
3300021475\|Ga0210392_10682309	Not Available	764	Open in IMG/M
3300021477\|Ga0210398_10748203	Not Available	789	Open in IMG/M
3300021860\|Ga0213851_1464733	Not Available	512	Open in IMG/M
3300022532\|Ga0242655_10172407	Not Available	647	Open in IMG/M
3300022724\|Ga0242665_10071584	Not Available	972	Open in IMG/M
3300025906\|Ga0207699_10586469	Not Available	811	Open in IMG/M
3300025911\|Ga0207654_11035989	Not Available	597	Open in IMG/M
3300025915\|Ga0207693_10384146	Not Available	1098	Open in IMG/M
3300025915\|Ga0207693_10591959	Not Available	864	Open in IMG/M
3300025928\|Ga0207700_10391505	Not Available	1217	Open in IMG/M
3300025929\|Ga0207664_10209163	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1687	Open in IMG/M
3300025929\|Ga0207664_10974194	Not Available	760	Open in IMG/M
3300025939\|Ga0207665_10082963	All Organisms → cellular organisms → Bacteria	2210	Open in IMG/M
3300026078\|Ga0207702_11734030	Not Available	617	Open in IMG/M
3300026281\|Ga0209863_10000380	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	23880	Open in IMG/M
3300027064\|Ga0208724_1007810	Not Available	1006	Open in IMG/M
3300027537\|Ga0209419_1037831	Not Available	922	Open in IMG/M
3300027605\|Ga0209329_1051748	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	876	Open in IMG/M
3300027619\|Ga0209330_1159804	Not Available	507	Open in IMG/M
3300027676\|Ga0209333_1047813	Not Available	1182	Open in IMG/M
3300027842\|Ga0209580_10232935	Not Available	915	Open in IMG/M
3300027855\|Ga0209693_10343727	Not Available	724	Open in IMG/M
3300027867\|Ga0209167_10015556	All Organisms → cellular organisms → Bacteria → Acidobacteria	3601	Open in IMG/M
3300027884\|Ga0209275_10640280	Not Available	611	Open in IMG/M
3300027889\|Ga0209380_10682803	Not Available	590	Open in IMG/M
3300027908\|Ga0209006_11255034	Not Available	576	Open in IMG/M
3300027911\|Ga0209698_10087441	All Organisms → cellular organisms → Bacteria → Acidobacteria	2631	Open in IMG/M
3300028013\|Ga0265350_101632	Not Available	995	Open in IMG/M
3300028047\|Ga0209526_10202690	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1373	Open in IMG/M
3300028798\|Ga0302222_10437008	Not Available	512	Open in IMG/M
3300029636\|Ga0222749_10824629	Not Available	507	Open in IMG/M
3300030740\|Ga0265460_13034346	Not Available	505	Open in IMG/M
3300030760\|Ga0265762_1002374	All Organisms → cellular organisms → Bacteria → Acidobacteria	3407	Open in IMG/M
3300031170\|Ga0307498_10446008	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	518	Open in IMG/M
3300031198\|Ga0307500_10225676	Not Available	569	Open in IMG/M
3300031231\|Ga0170824_112611651	Not Available	501	Open in IMG/M
3300031231\|Ga0170824_122156018	Not Available	982	Open in IMG/M
3300031446\|Ga0170820_15207051	Not Available	526	Open in IMG/M
3300031525\|Ga0302326_11855251	Not Available	786	Open in IMG/M
3300031544\|Ga0318534_10818981	Not Available	523	Open in IMG/M
3300031573\|Ga0310915_10682507	Not Available	725	Open in IMG/M
3300031708\|Ga0310686_117300205	Not Available	1189	Open in IMG/M
3300031724\|Ga0318500_10682188	Not Available	523	Open in IMG/M
3300031754\|Ga0307475_10607175	Not Available	876	Open in IMG/M
3300031754\|Ga0307475_10757260	Not Available	772	Open in IMG/M
3300031754\|Ga0307475_10765477	Not Available	767	Open in IMG/M
3300031833\|Ga0310917_10312181	Not Available	1064	Open in IMG/M
3300031890\|Ga0306925_10859845	Not Available	936	Open in IMG/M
3300031912\|Ga0306921_10899514	Not Available	1005	Open in IMG/M
3300031962\|Ga0307479_11188370	Not Available	727	Open in IMG/M
3300032205\|Ga0307472_101823490	Not Available	605	Open in IMG/M
3300032515\|Ga0348332_11359550	All Organisms → cellular organisms → Bacteria → Acidobacteria	1879	Open in IMG/M
3300032783\|Ga0335079_12053067	Not Available	549	Open in IMG/M
3300032783\|Ga0335079_12257440	Not Available	518	Open in IMG/M
3300032805\|Ga0335078_11962552	Not Available	628	Open in IMG/M
3300032828\|Ga0335080_11903424	Not Available	578	Open in IMG/M
3300033158\|Ga0335077_10350616	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1600	Open in IMG/M
3300033412\|Ga0310810_11243780	Not Available	596	Open in IMG/M
3300033547\|Ga0316212_1013166	Not Available	1174	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.17%
Host-Associated	Host-Associated	5.83%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	84.17%
Aquatic	Environmental → Aquatic	10.00%
Plants	Host-Associated → Plants	5.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	81.67%
Freshwater	Environmental → Aquatic → Freshwater	5.83%
Sediment	Environmental → Aquatic → Sediment	3.33%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.33%
Peat	Environmental → Terrestrial → Peat	1.67%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.67%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.83%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.83%
Roots	Host-Associated → Plants → Roots	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	52.50%
Loam	Environmental → Terrestrial → Soil → Loam	22.50%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.67%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	5.00%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.33%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.33%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.67%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.83%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.83%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.83%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.83%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	25.00%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.67%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	13.33%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.17%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.17%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.17%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.33%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.33%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.50%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.50%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.67%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.67%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.83%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.83%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.83%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.83%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.83%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.83%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	15.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.50%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	7.50%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.50%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.67%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	5.00%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	4.17%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.17%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	4.17%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.33%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.33%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	2.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.50%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.50%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.67%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.67%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	1.67%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.67%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	1.67%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.67%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	0.83%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.83%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.83%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.83%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.83%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.83%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.83%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.83%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.83%
Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Roots	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300005993	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046	Environmental	Open in IMG/M
3300005995	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300007982	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPM 11 metaG	Environmental	Open in IMG/M
3300009616	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_100	Environmental	Open in IMG/M
3300009618	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_100	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300014052	Permafrost microbial communities from Nunavut, Canada - A23_35cm_12M	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015262	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG	Host-Associated	Open in IMG/M
3300015265	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300017936	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300018017	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_40	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019882	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a2	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021860	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2014 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022532	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022724	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026281	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046 (SPAdes)	Environmental	Open in IMG/M
3300027064	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF003 (SPAdes)	Environmental	Open in IMG/M
3300027537	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027605	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027619	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027676	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O3 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028013	Soil microbial communities from Maridalen valley, Oslo, Norway - NSE2	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028798	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_2	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030740	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ARE Co-assembly	Environmental	Open in IMG/M
3300030760	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031198	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 14_S	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300033547	Spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE1	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25616J43925_102368272	3300002917	Grasslands Soil	MRLRWDNYRQRPFARMVQLFIARIFHGGGDADSEGFDLSVGLVLSLLALPGGFVSILLFNKYGSLLQWMRGATDVDPY
Ga0070709_103974971	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MTFQQQWERRREQPFWRLVEVFVERIFRGGGDTDAEGLDLGVGLVLTLLAMPGGFVSVLLFDKYGSL
Ga0070713_1013566101	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MIREIARQEWEYHRDRPFGRLVQLFVARIFRGGGDTDAEGLDLGVGLVLTLLTLPGGFVS
Ga0070711_1019351271	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MTSPFEIAGHWWNFYRQRPFGRLVELFIARIFRGGGDADAEGLDLGIGLVLTVLAMPGGFVSLLLLDKYGTFAQWLRGLKPFDVLQA
Ga0066687_109118241	3300005454	Soil	MSFLYTRAERSRWDAYRERPFWRLVELFVGRVFRGGGDSDAPGLDLGIGLVLTLLAIPGGFVSLFLF
Ga0070732_100646611	3300005542	Surface Soil	MSLLAAKSDRNRWDAYRERPFLRLVELFVARVFRGGGDSDAPGLDLGMGLILTLLAIPGG
Ga0070732_101176821	3300005542	Surface Soil	MLSEAIQHQWEYYRERPFGRMVGLFGERIFRGGGDSDTEGLDLGIGLVLTMLAMPGGFVSILLFDKYGSLL
Ga0070732_102671432	3300005542	Surface Soil	MSLLIDPIRHNWDYYKERPFGRLVRLFVERIFRGGGDTDTEGLDLGVGLVLTLLAMPGGF
Ga0070762_104452162	3300005602	Soil	MITAPTERIRRAWADHRQRPFWRIVQLFVDRIFRGGGDADTEGLDLGVGLVLTLLAMPGGFVSLFLLNKYGTFLQW
Ga0070763_103021331	3300005610	Soil	MITAVIDAFWRAWSDYGERPFWRMVQLFVDRIFRGGGDADTEGLDLGVGLVLTLLAMPGGFVSLLLLNKYGTFLQ
Ga0066903_1087822001	3300005764	Tropical Forest Soil	MSFAQRWQTYRERPFWRLVELFVERIFRGGGDTDAEGVDLGVGLVLTLLAMPGGFVS
Ga0070766_107290672	3300005921	Soil	MTSPVEVFRQWWGYYHERPFWRLFRIFVARIFRGGGDSDSEGLDLGVGLVLTLLALPGGF
Ga0080027_100046281	3300005993	Prmafrost Soil	MISAIKSEIERVWAEHRQRPFWRMVRLFVDRIFRGGGDSDTEGLDLGVGLVLTLLAMPGGFVSLLLLNKYGPFCNGCGARLPRTH*
Ga0066790_102254971	3300005995	Soil	MISAIKSEIEHGWAEHQQRPFWRMVRLFVDRIFRGGGDSDTEGLDLGVGLVLTLLAMPGGFVSLLL
Ga0066656_102354911	3300006034	Soil	MSLIAAKSGRSRWDVYRERPFWRLVELFVARVFRGGGDSDAPGLDLGMGLILTLLAIPGGFVSLFLLDKYGTFLQWL
Ga0075017_1007311072	3300006059	Watersheds	MLRDLIRQEWDYHRQRPFGRLVQVFVERIFRGGGDADTEGLDLGLGLVLTLLAMPGGFVSVLLFDKYGSLLQWMRGQHNVDTLLL
Ga0075019_106880062	3300006086	Watersheds	MITDLTKSWARYRQRPFTRLVRLFLARIFHGDGEAEAEGLDVSLGLALTLLALPGGFVSILLFNKYGSLLQWMQGAVKVDPI
Ga0075015_1004752922	3300006102	Watersheds	MLKDIIQQEWEYQRERPFGRLVRLFVERIFRGGGDTDAEGLDLGVGLVLTFLAMPGGFVSVLLFDKY
Ga0070712_1005864631	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MIAGVVDEIFRRWEEHSQRPFWRMVGLFVTRIFRGGGDLDAEGLDLGVGLVLTLLALPGGFVSILLFEKYGTLLQWMRG
Ga0066660_104951081	3300006800	Soil	MTSPFEIAWQWWEYYRQRPFLRLVELFVARIFRGGGDVDAEGLDLGIGLVLTLLAMPGGFVSLLL
Ga0079220_107034132	3300006806	Agricultural Soil	MSLLAAKSDRNRWDVYRERPFWRLVELFVARVFRGGGDSDAPGLDLGMGLILTLLAIPGGFVSLFLLDKYGTFLQ
Ga0102924_11347962	3300007982	Iron-Sulfur Acid Spring	VFYSWQERRQRPFWRLVYLFAARAFRGGGDTDTEGLDLGIGLVLTLLAMPGGFVSLLLLNKYGTFLQ*
Ga0116111_10571912	3300009616	Peatland	MITEAMEEVFRRWEEHSQRPFWRMVRLFVARIFRGGGDADAEGLDLGVGLVLTLLALPGGFVSILLFEKYGTLLQWMRG
Ga0116127_11174141	3300009618	Peatland	MITEAMEEVFRRWEEHSQRPFWRMVRLFVARIFRGGGDADAEGLDLGVGLVLTLLALPGGFVSILLFEKYGTLLQWMRGATNIDPFA
Ga0126381_1013634632	3300010376	Tropical Forest Soil	MSFHRQWEKRREEPFWRLVELFVERIFRGGGDSDTEGLDLGVGLVLTLLAMPGGFVSVLLFDKYG*
Ga0126381_1018930212	3300010376	Tropical Forest Soil	MRMSIRERMEHRWEVYRQRPFWRLVEVFLARIFRGGGDSDDEGLDLGIGLVLTFLAIPGGFVSILLFD
Ga0126383_113593512	3300010398	Tropical Forest Soil	MIRDFARQEWEYHCERPLGKLVQLFVERIFRGGGDTDAEGLDLGVGLVLTLLAIPGGFVSVFLFD
Ga0126383_132441971	3300010398	Tropical Forest Soil	MLREIIQHEWEYQREQPFGRLVNLFVERIFRGGGDADAEGLDLGVGLVLTFLAMPGGFVSVF
Ga0105246_123845332	3300011119	Miscanthus Rhizosphere	MSLLAAKSDRNRWDVYRERPFWRLVELFVARVFRGGGDSDAPGLDLGMGLILTLLAIPGGFVSLFLLDKYGTFLQW
Ga0150983_106028081	3300011120	Forest Soil	MITAPTERIRRAWADHRQRPFWRIVQLFVDRIFRGGGDADTEGLDLGVGLVLTLLAMPG
Ga0150983_166969791	3300011120	Forest Soil	MIGEIARQEWEYQRDRPFGRLVQLFVARIFRGGGDTDAEGLDLGVGLVLTLLALPG
Ga0137392_107537152	3300011269	Vadose Zone Soil	MITQAIDAIFRRWEEHRQRPFWRMVDLFVARIFRGGGDSDAEGLDLGVGLVLTLLAMPGGFVSLLLLNK
Ga0137389_102105903	3300012096	Vadose Zone Soil	MTTLLTASIRRRWDNYRQRPFARMVQLFIARIFHGGGDADSEGLDLSVGLVLSLLALPGGFVSILLFNKYGSLLQWMRGVTEVDPYAVAV
Ga0137379_100813661	3300012209	Vadose Zone Soil	MITQAIDAIFRRWEEHRQRPFWRMVDLFVARIFRGGGDSDAEGLDLGVGLVLTLLAMPGGFVSLLLLNKYGTFLQ
Ga0137379_108671001	3300012209	Vadose Zone Soil	MISQAMDAIVRALDDYRQHAFWRLVQLFVARIFRGGGDSDSEGLDLGVGLVLTLLALPGGFVSILLFEKYGTLLQWMRGATNIDPFASSIPD
Ga0137371_112841731	3300012356	Vadose Zone Soil	MIREIVQQEWAYHRERPFGRLVQIFVERIFRGGGDTDAEGLDLGVGLVLTFLAMPG
Ga0137384_102450473	3300012357	Vadose Zone Soil	MISQAMDAIVRALDDYRQHAFWRLVQLFVARIFRGGGDSDSEGLDLGVGLVLTLLALPGGFVSILLFEKYGTLLQWMRGATNIDPFASAIPD
Ga0137413_108669752	3300012924	Vadose Zone Soil	MTMLLTGLIQQWWDNYRQQPFVRMLQLFIARIFHGGGDADSEGLDLSVGLVLSLLALPGGFVSILLFNKYGSLL
Ga0164306_114661821	3300012988	Soil	MSLIAAKSDRSRWDVYRERPFWRLVELFVARVFRGGGDSDAPGLDLGMGLILTLLAMPGGFVSLFL
Ga0164305_109326472	3300012989	Soil	MSLIAAMSDRSRWDVYRERPFWRLVELFVARVFRGGGDSDAPGLDLGMGLILTLLAMPGGFVSL
Ga0120109_10829642	3300014052	Permafrost	MIPLALETIFRRWEDYRQRPFWRMVQLFVARIFRGGGDSDTEGLDLGVGLVLTLLALPGGFVSILLFEKYGTLLQWMRGATNIDPFASAVPD
Ga0137409_104039782	3300015245	Vadose Zone Soil	MISVVVTEIGHVWAEHRQRPFWRMVRLFVDRIFRGGDSDAEGLDLGVGLVLTLLAMPGGFVSLLLLNKY
Ga0182007_103687351	3300015262	Rhizosphere	MSLLAAKSDRNRWDVYRERPFWRLVELFVARVFRGGGDSDAPGLDLGMGLILTLLAIPGGFVSLFLLDKY
Ga0182005_12067551	3300015265	Rhizosphere	MSLLAAKSDRNRWDVYRERPFWRLVELFVARVFRAGGDSDAPGLDLGMGLILTLLAIPGGFVSLFLLDKYGTFL
Ga0132258_131435701	3300015371	Arabidopsis Rhizosphere	MIGEAIDGVIRGLEKRRKRPFWRMVQLFVARIFRGGGESDSEGLDLGVGLVLTLLALPGGFVSILLFEKYGTLLQWMRGATNID
Ga0182041_107571732	3300016294	Soil	MIREIIRQEWEYHRDRPFGRLAQLFVERIFRGGGDTDAEGLDLGVGLVLTLLAMPGGFVSVLLFDKYG
Ga0187821_100182581	3300017936	Freshwater Sediment	MITEAVEEIFRRWEEHSDRPFWRLVRLFVARIFRGGGDSDAEGLDLGVGLVLTLLALPGGFVSILLFEKY
Ga0187879_106329921	3300017946	Peatland	MITEALDALTYRWERRRQRPFWRMVYLFAARIFRGGGDSDAEGLDLGIGLVLTLLAMPGGFVSILLLNKYGTFLQW
Ga0187872_100112326	3300018017	Peatland	MITEAMEEVFRRWEEHSQRPFWRMVRLFVARIFRGGGDADAEGLDLGVGLVLTLLALPG
Ga0187863_100131881	3300018034	Peatland	MITEALDALTYRWERRRQRPFWRMVYLFAARIFRGGGDSDAEGLDLGIGLVLTLLAMPGGFVSI
Ga0066662_113924281	3300018468	Grasslands Soil	MSLLAEALERRWEIYRQRPFWRLVEVFVGRIFRGGGDSDSEGMDVGVGLILMLLAMPGGFVSIL
Ga0193713_11199291	3300019882	Soil	MISEAIDAIERGLEERKQLPFWRMVQLFVARIFRGGGDNDSEGLDLGVGLVLTLLALPGGFVSILLFEKYGTLLQWMRGATNIDPFASAVP
Ga0210407_101036411	3300020579	Soil	MIREIARQEWEYHRDQPFGRLVQLFVARIFRGGGDTDAEGLDLGVGLVLTLLTLPGGVVSIFL
Ga0210403_113131111	3300020580	Soil	MNSPFDVFRHWWEHYRQRLFLRLVELFVARIFRGGGDADAEGLDLGIGLVLTLLAMPGGFVSLLLLEKYGTLAEWLRGITNV
Ga0210399_101038191	3300020581	Soil	VIRQPIDALVSRLEDYRGRPFWRMVQLFVARIFRGGGDSDSEGLDLGIGLVLTLLAIPGGFVSILLLNKYGTFLQWLRAA
Ga0210399_105855261	3300020581	Soil	MLRDIVRQEWEYHRERPFGRLVQLFVERIFRGGGDTDTEGLDLGVGLVLTLLAMPGGFVSVLLFDKYGSL
Ga0210399_111725331	3300020581	Soil	MIAEGIDAIVLQWEEHSQRPFWRMVRLFVARIFRGGGDADTDGLDLGIGLVLTLLALPGGFVSLFLLDKYGTF
Ga0210396_116684441	3300021180	Soil	MITAPTERIRRAWADQRQRPFWRIVQLFVDRIFRGGGDADTEGLDLGVGLVLTLLAMPGG
Ga0210393_104333841	3300021401	Soil	MITQAADVIFRVWDDHRQRPFWRMVQLFVARIFRGGGDSDADGLDLGIGLVLTLLALPGAFVSLFLME
Ga0210393_108369072	3300021401	Soil	MIRDLLRQEWDYHRERPFGRLVQLFVERIFRGGGDADTEGLDLGVGLVLTLLALPGGFVSLFLLDKYGSFL
Ga0210389_108351092	3300021404	Soil	MIRDLIRQEWDYHRERPFGRLVKLFVERIFRGGGDADTEGLDLGVGLILTLLALPGGFVSLLLLDKYASF
Ga0210392_106823091	3300021475	Soil	MIAEALDELWNRWDERRQSPFWRMVYLFAARVFRGGGDSDAEGLDLGIGLVLTLLAMPGGFVSLLLLNKYGTFLK
Ga0210398_107482032	3300021477	Soil	MNFSLATSITHRWEVFRQRPFARLVRLFAARIFHGGGDDDSEGLDLSIGLVLTLLALPGGFVSVLLFEKYGSLLQWMRGVIDFNPLAAA
Ga0213851_14647332	3300021860	Watersheds	MIAEALDAVWNKWDERRQRPFWRMVYLFAARVFRGGGDSDAEGLDLGIGLVLTLLAMPGGFVSILLLNK
Ga0242655_101724071	3300022532	Soil	MIREIARQEWEYQRDRPFGRLVQLFVARIFRGGGDTDAEGLDLGVGLVLTLLALPGGF
Ga0242665_100715842	3300022724	Soil	MIREIARQEWEYQRDRPFGRLVQVFVARIFRGGGDTDAEGLDLGVGLVLTLLALPGGFVSIFLFD
Ga0207699_105864692	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MTFQQQWERRREQPFWRLVEVFVERIFRGGGDTDAEGLDLGVGLVLTLLAMPGGFVSVLLFD
Ga0207654_110359891	3300025911	Corn Rhizosphere	MSLLAAKSDRNRWDVYRERPFWRLVELFVARVFRGGGDSDAPGLDLGMGLILTLLAIPGGFVSLFLLDT
Ga0207693_103841462	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MSLLAAKSDRNRWDVYRERPFWRLVELFVARVFRGGGDSDAPGLDLGMGLILTLLAIPGGFVSLFLLDKYGTFLQWLR
Ga0207693_105919591	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MIAGVVDEIFRRWEEHSQRPFWRMVGLFVTRIFRGGGDLDAEGLDLGVGLVLTLLALPGGFVSILLFEKYGTLLQW
Ga0207700_103915053	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MFSAVMSEIGHVWAQHRQRPFWRMVRLFVDRIFRGGGDSDTEGLDLGVGLVLTLLAMPGGFVSLLLLNKY
Ga0207664_102091633	3300025929	Agricultural Soil	MLSEAIQHQWEYYRERPFGRMVRLFGERIFRGGGDSDSEGLDLGIGLVLTMLAMPGGFVSILLFDKY
Ga0207664_109741942	3300025929	Agricultural Soil	MSMLAAKSHRSRWDVYRERPFWRLVELFVARVFRGGGDSDAPGLDLGMGLILTLLAMPGGFVSL
Ga0207665_100829634	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MLREIIRQEWEYQREQPFGRLVKLFVERIFRGGGDTDAEGLDLGVGLVLTFLAMPGGFVSVFLFDKYG
Ga0207702_117340302	3300026078	Corn Rhizosphere	MSLLAAKSDRNRWDVYRERPFWRLVELFVARVFRGGGDSDAPGLDLGMGLILTLLAIPGGFVSLFLLDKYGTF
Ga0209863_100003804	3300026281	Prmafrost Soil	MISAIKSEIERVWAEHRQRPFWRMVRLFVDRIFRGGGDSDTEGLDLGVGLVLTLLAMPGGFVSLLLLNKYGPFCNGCGARLPRTH
Ga0208724_10078102	3300027064	Forest Soil	MITAPTERIRRAWADHRQRPFWRIVQLFVDRIFRGGGDADTEGLDLGVGLVLTLLAMPGGFVSLFLLNKYGT
Ga0209419_10378312	3300027537	Forest Soil	MTSPFEILEHWWEYYRQRPFLRLVELFIARVFRGGGDADAEGLDLGIGLVLTLLAMPGGFVSLLLLDKYGTFAQ
Ga0209329_10517481	3300027605	Forest Soil	MTSPFEILEHWWEYYRQRPFLRLVELFVARVFRGGGDADAEGLDLGIGLVLTLLAMPGGFVSLLLLDKYGTFAQWLK
Ga0209330_11598042	3300027619	Forest Soil	MTSPFEILEHWWEYYRQRPFLRLVELFVARVFRGGGDADAEGLDLGIGLVLTLLAMPGGFVSLLLLDKYGTF
Ga0209333_10478132	3300027676	Forest Soil	MNFSLATSITHRWETFRQRPFARLERLFAARIFHGGGDDDSEGFDLSIGLVLTLLALPGGFVSVLLF
Ga0209580_102329351	3300027842	Surface Soil	MSLLIDPIRHNWDYYKERPFGRLVRLFVERIFRGGGDTDTEGLDLGVGLVLTLLAMPGGFVS
Ga0209693_103437271	3300027855	Soil	MITAPTERIRRAWADHRQRPFWRIVQLFVDRIFRGGGDADTEGLDLGVGLVLTLLAMPGGFVSL
Ga0209167_100155561	3300027867	Surface Soil	VTWLFETLRRRWEHYRQRPFWRLVELFVARIFRGGGDSDAEGLDLGVGLALTLLAMPGGFVSLLLLNKYG
Ga0209275_106402802	3300027884	Soil	MTSPFEILEHWWEYYRQRPFLRLVELFIARVFRGGGDADAEGLDLGIGLVLTLLAMPGGFVSLLLLDKY
Ga0209380_106828032	3300027889	Soil	MITAVIDAFWRAWSDYGERPFWRMVQLFVDRIFRGGGDADTEGLDLGVGLVLTLLAMPGGFVSLLLLNK
Ga0209006_112550341	3300027908	Forest Soil	MTINLSRGIGQWWQAFRDRPFARLVPLFTARIFRGSGDNDAEGLDLSIGLVLTLLALPGGFVSIILFPKYG
Ga0209698_100874414	3300027911	Watersheds	MISLLTDPIRHWWEYYRQRPFGRMVELFVARIFRGGGDSDTEGLDLGIGLALTLLALPGGFVSILLLDKYG
Ga0265350_1016321	3300028013	Soil	MNFPLVTSSTHRWETFRHRPFARLVRLFTARIFHGGGDDDSEGLDLSIGLVLTLLALPGGFVSVLLFEKYGSLLQWMRGVTDFNPLAAA
Ga0209526_102026901	3300028047	Forest Soil	MTSPFEILEHWWEYYRQRPFLRLVELFIARVFRGGGDADAEGLDLGIGLVLTLLAMPGGFVSLLLLDKYGTFAQWLKGITNVDVLQAALPDE
Ga0302222_104370082	3300028798	Palsa	VSLLAAKKLPHRWDKYLERPFWRLVQLFGERIFRGGGDSDSEGLDLGIGLVLTMLAMPGG
Ga0222749_108246292	3300029636	Soil	MISAAMSEIGHVWAEHRQRPFWRMVQLFIDRIFRGGGDSDTEGLDLGVGLVLTLLAMPG
Ga0265460_130343461	3300030740	Soil	MITQVIDGFFRVWDDHRQRPFWRMVQLFVARIFRGGGDSDTEGLDLGIGLVLTLLAMPGGFVSILLFNKYGTFLQWLR
Ga0265762_10023741	3300030760	Soil	MITAPTERIRRAWADHRQRPFWRIVQLFVDRIFRGGGDADTEGLDLGVGLVLTLLAMPGGFV
Ga0307498_104460081	3300031170	Soil	MGEAIDGIIRGLEERRQRPFWRMVQLFVARIFRGGGDSDSEGLDLGVGLVLTLLALPGGFVSILLFEKYGTLLQWMRGATNIDPFASA
Ga0307500_102256761	3300031198	Soil	MIREIARQEWEYHRDRPFGRLVQLFVARIFRGGGDTDAEGLDLGVGLVLTLLALPG
Ga0170824_1126116511	3300031231	Forest Soil	MISQAIDAILSRWEAQSQRPFWRMVQLFVARIFRGGGDSDAEGLDLGVGLVLTLLAMPGG
Ga0170824_1221560182	3300031231	Forest Soil	MIREIASQEWEYHRDRPFGRLVQLFVARIFRGGGDTDAEGIDLGMGLVLTLLAMPGGFVSVFLFDKYGSLL
Ga0170820_152070511	3300031446	Forest Soil	MITQAIDAILSRWEAQSQRPFWRMVELFVARIFRGGGDSDAEGLDLGVGLVLTLLAMPGGFV
Ga0302326_118552512	3300031525	Palsa	MKTDFIRAISQWWSAYSKRPFARLVRLFTARIFQGGGDNDAAGIDLSMGLILTLLALPGGFVSVILFPKYGTL
Ga0318534_108189812	3300031544	Soil	MIRDLLRQEWDYHRDRPFGRLVQLFVERIFRGGGDTDAEGLDLGVGLTLTLLAIPGGFVSVFLFDKYGSLL
Ga0310915_106825072	3300031573	Soil	MIREIIRQEWEYHRDRPFGRLAQLFVERIFRGGGDTDAEGLDLGVGLVLTLLAMPGG
Ga0310686_1173002051	3300031708	Soil	MTLPERIRRAWADHRQRPFWRMVQLFVDRIFRGGGDSDTAGLDLGMGLVLTLLAMPGGFVSILLF
Ga0318500_106821882	3300031724	Soil	MIRDLLRQEWDYHRDRPFGRLVQLFVERIFRGGGDTDAEGLDLGVGLTLTLLAIPGGFVSVFLFDKYGSLLQ
Ga0307475_106071751	3300031754	Hardwood Forest Soil	MITQASDAILRIWDDQRQRPFGRMVQLFVARIFRGGGDSDAEGLDLGIGLVLTLLAMPGGFVSIFLFNKYGTF
Ga0307475_107572601	3300031754	Hardwood Forest Soil	MIGEIARQEWEYQRDRPFGRLVQLFVARIFRGGGDTDAEGLDLGVGLVLTLLALPGGFVSIFLFDKYGSLLQW
Ga0307475_107654771	3300031754	Hardwood Forest Soil	MIREIARQEWEYQRDRPFGRLVQLFVARIFRGGGDTDAEGLDLGVGLVLTLLALPGGFVSIFLFDKYGSLLQW
Ga0310917_103121812	3300031833	Soil	MIRDLLRQEWDYHRDRPFGRLVQLFVERIFRGGGDTDAEGLDLGVGLTLTLLAIPGGFVSVFLFDKYGSLLQW
Ga0306925_108598452	3300031890	Soil	MIRDLLRQEWDYHRDRPFGRLVQLFVERIFRGGGDTDAEGLDLGVGLTLTLLAIPGGFVS
Ga0306921_108995141	3300031912	Soil	MIREIIRQEWEYHRDRPFGRLAQLFVERIFRGGGDTDAEGLDLGVGLVLTLLAMPGGFVSVLLFDKY
Ga0307479_111883702	3300031962	Hardwood Forest Soil	MISAAIEAVFRRWEKHSERPFWRMVQLFVARIFRGGGDSDAEGLDLGIGLVLTLLALPGGFVSLFLLDKYGT
Ga0307472_1018234901	3300032205	Hardwood Forest Soil	MISQAIDAILTRWETRWEAQSQRPFWRMVQLFVARIFRGGGDSDAEGLDLGVGLVLTLLAMPGGFVSLLLLNKYATFLQ
Ga0348332_113595501	3300032515	Plant Litter	MITAPTERIRRAWADHRQRPFWRIVQLFVDRIFRGGGDADTEGLDLGVGLVLTLLAMPGGFVSLFLLNKYGTF
Ga0335079_120530671	3300032783	Soil	MIDLLTDPFRHWWAYYGQRPFWRMVDLFVARIFRGGGDSDTDGLDFGIGLVLTLLALPGGFVSICLFDKYGTLLQWMRGTLNV
Ga0335079_122574402	3300032783	Soil	MLSDLLRQEWDYHRDRPFGRMVQLFVARIFRGGGDTDAEGLDLGVGLVMTLLAMPGGFVSLLLLDKYG
Ga0335078_119625522	3300032805	Soil	VTSPLEIARHWWEYYRERPFLRLVRLFVARIFRGGGDADTEGLDLGIGLVLTLLAMPGGFVSLLLLDK
Ga0335080_119034241	3300032828	Soil	MIDLLTDPFRHWWAYYGQRPFWRMVDLFVARIFRGGGDSDTDGLDFGIGLVLTLLALPGGFVSICLFDKYGTLLQWM
Ga0335077_103506163	3300033158	Soil	MLSDLLRQEWDYHRDRPFGRMVQLFVARIFRGGGDTDAEGLDLGVGLVMTLLAMPGGFVS
Ga0310810_112437802	3300033412	Soil	MSLLAAKSDRNRWDVYRERPFWRLVELFVARVFRGGGDSDAPGLDLGMGLILTLLAIPG
Ga0316212_10131662	3300033547	Roots	MRNRITRAMERSWAEWRQRPLARLVRLFTARIFRGSGDSDADGLDLGVGLVLTLLALPGGFVAVLLFPKYGTLLQWMRG

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.38
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.38
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F073849

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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