Metagenome / Metatranscriptome Family F073707

Basic Information
Family ID	F073707
Family Type	Metagenome / Metatranscriptome
Number of Sequences	120
Average Sequence Length	45 residues
Representative Sequence	LKRTLLWLIVAAVLVIGFLLYRSRSGSNLNVTPDAEREIEKAKRR
Number of Associated Samples	102
Number of Associated Scaffolds	120

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	54.55 %
% of genes near scaffold ends (potentially truncated)	19.17 %
% of genes from short scaffolds (< 2000 bps)	66.67 %
Associated GOLD sequencing projects	92
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.40

Most Common Taxonomy
Group	Bacteria (50.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (13.333 % of family members)
Environment Ontology (ENVO)	Unclassified (31.667 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (40.833 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 45.21% β-sheet: 0.00% Coil/Unstructured: 54.79%
Feature Viewer

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Pfam ID	Name	% Frequency in 120 Family Scaffolds
PF00196	GerE	6.67
PF00873	ACR_tran	6.67
PF14079	DUF4260	4.17
PF01176	eIF-1a	2.50
PF02837	Glyco_hydro_2_N	1.67
PF02472	ExbD	1.67
PF05199	GMC_oxred_C	1.67
PF04972	BON	1.67
PF11154	DUF2934	1.67
PF12543	DUF3738	1.67
PF01594	AI-2E_transport	1.67
PF01011	PQQ	1.67
PF09206	ArabFuran-catal	1.67
PF02585	PIG-L	0.83
PF04365	BrnT_toxin	0.83
PF01804	Penicil_amidase	0.83
PF13439	Glyco_transf_4	0.83
PF02922	CBM_48	0.83
PF01636	APH	0.83
PF01593	Amino_oxidase	0.83
PF12796	Ank_2	0.83
PF02566	OsmC	0.83
PF01435	Peptidase_M48	0.83
PF01740	STAS	0.83
PF06271	RDD	0.83
PF00939	Na_sulph_symp	0.83
PF12700	HlyD_2	0.83
PF01381	HTH_3	0.83
PF12419	DUF3670	0.83
PF13673	Acetyltransf_10	0.83
PF01613	Flavin_Reduct	0.83
PF07638	Sigma70_ECF	0.83
PF02518	HATPase_c	0.83
PF07730	HisKA_3	0.83
PF05973	Gp49	0.83
PF04397	LytTR	0.83

COG ID	Name	Functional Category	% Frequency in 120 Family Scaffolds
COG0361	Translation initiation factor IF-1	Translation, ribosomal structure and biogenesis [J]	2.50
COG0628	Predicted PurR-regulated permease PerM	General function prediction only [R]	1.67
COG0848	Biopolymer transport protein ExbD	Intracellular trafficking, secretion, and vesicular transport [U]	1.67
COG2303	Choline dehydrogenase or related flavoprotein	Lipid transport and metabolism [I]	1.67
COG3250	Beta-galactosidase/beta-glucuronidase	Carbohydrate transport and metabolism [G]	1.67
COG0471	Di- and tricarboxylate antiporter	Carbohydrate transport and metabolism [G]	0.83
COG1055	Na+/H+ antiporter NhaD or related arsenite permease	Inorganic ion transport and metabolism [P]	0.83
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.83
COG1714	Uncharacterized membrane protein YckC, RDD family	Function unknown [S]	0.83
COG1764	Organic hydroperoxide reductase OsmC/OhrA	Defense mechanisms [V]	0.83
COG1765	Uncharacterized OsmC-related protein	General function prediction only [R]	0.83
COG1853	FMN reductase RutF, DIM6/NTAB family	Energy production and conversion [C]	0.83
COG2120	N-acetylglucosaminyl deacetylase, LmbE family	Carbohydrate transport and metabolism [G]	0.83
COG2366	Acyl-homoserine lactone (AHL) acylase PvdQ	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.83
COG2929	Ribonuclease BrnT, toxin component of the BrnT-BrnA toxin-antitoxin system	Defense mechanisms [V]	0.83
COG3657	Putative component of the toxin-antitoxin plasmid stabilization module	Defense mechanisms [V]	0.83
COG3850	Signal transduction histidine kinase NarQ, nitrate/nitrite-specific	Signal transduction mechanisms [T]	0.83
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	0.83
COG4564	Signal transduction histidine kinase	Signal transduction mechanisms [T]	0.83
COG4585	Signal transduction histidine kinase ComP	Signal transduction mechanisms [T]	0.83
COG4679	Phage-related protein gp49, toxin component of the Tad-Ata toxin-antitoxin system	Defense mechanisms [V]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	51.67 %
Unclassified	root	N/A	48.33 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	51.67 %
Unclassified	root	N/A	48.33 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	50.00 %
Unclassified	root	N/A	48.33 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.83 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.33 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	22.50 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.33 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.67 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.83 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.83 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.33 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	7.50 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	4.17 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.83 %
Stenosarchaea group	clade	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group	0.83 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.83 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.83 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.83 %
Fungi	kingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.33 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	5.00 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.17 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	2.50 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.83 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.83 %
Halobacteria	class	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria	0.83 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.83 %
Dikarya	subkingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya	0.83 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.33 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.17 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2.50 %
Bryobacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae	1.67 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	1.67 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.83 %
Halobacteriales	order	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Halobacteriales	0.83 %
unclassified Planctomycetia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → unclassified Planctomycetia	0.83 %
Ascomycota	phylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota	0.83 %
Oscillatoriophycideae	subclass	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae	0.83 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.33 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.17 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2.50 %
Candidatus Sulfopaludibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter	1.67 %
Paludibaculum	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Paludibaculum	1.67 %
saccharomyceta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta	0.83 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.83 %
Halococcaceae	family	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Halobacteriales → Halococcaceae	0.83 %
Planctomycetia bacterium 21-64-5	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → unclassified Planctomycetia → Planctomycetia bacterium 21-64-5	0.83 %
Chroococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Chroococcales	0.83 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.33 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.17 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2.50 %
unclassified Candidatus Sulfopaludibacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter	1.67 %
Paludibaculum fermentans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Paludibaculum → Paludibaculum fermentans	1.67 %
Halococcus	genus	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Halobacteriales → Halococcaceae → Halococcus	0.83 %
Chroococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Chroococcales → Chroococcaceae	0.83 %
Saccharomonospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharomonospora	0.83 %
Pezizomycotina	subphylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina	0.83 %
Planctomycetia bacterium 21-64-5	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → unclassified Planctomycetia → Planctomycetia bacterium 21-64-5	0.83 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.33 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.17 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2.50 %
Candidatus Sulfopaludibacter sp. SbA4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	1.67 %
Paludibaculum fermentans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Paludibaculum → Paludibaculum fermentans	1.67 %
leotiomyceta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta	0.83 %
Gloeocapsa	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Chroococcales → Chroococcaceae → Gloeocapsa	0.83 %
Saccharomonospora azurea	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharomonospora → Saccharomonospora azurea	0.83 %
Halococcus hamelinensis	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Halobacteriales → Halococcaceae → Halococcus → Halococcus hamelinensis	0.83 %
Planctomycetia bacterium 21-64-5	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → unclassified Planctomycetia → Planctomycetia bacterium 21-64-5	0.83 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.33 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.17 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2.50 %
Candidatus Sulfopaludibacter sp. SbA4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	1.67 %
Paludibaculum fermentans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Paludibaculum → Paludibaculum fermentans	1.67 %
Halococcus hamelinensis 100A6	strain	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Halobacteriales → Halococcaceae → Halococcus → Halococcus hamelinensis → Halococcus hamelinensis 100A6	0.83 %
sordariomyceta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → sordariomyceta	0.83 %
Gloeocapsa	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Chroococcales → Chroococcaceae → Gloeocapsa	0.83 %
Saccharomonospora azurea	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharomonospora → Saccharomonospora azurea	0.83 %
Planctomycetia bacterium 21-64-5	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → unclassified Planctomycetia → Planctomycetia bacterium 21-64-5	0.83 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.33 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.17 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2.50 %
Candidatus Sulfopaludibacter sp. SbA4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	1.67 %
Paludibaculum fermentans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Paludibaculum → Paludibaculum fermentans	1.67 %
Sordariomycetes	class	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → sordariomyceta → Sordariomycetes	0.83 %
Halococcus hamelinensis 100A6	strain	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Halobacteriales → Halococcaceae → Halococcus → Halococcus hamelinensis → Halococcus hamelinensis 100A6	0.83 %
Gloeocapsa	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Chroococcales → Chroococcaceae → Gloeocapsa	0.83 %
Saccharomonospora azurea	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharomonospora → Saccharomonospora azurea	0.83 %
Planctomycetia bacterium 21-64-5	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → unclassified Planctomycetia → Planctomycetia bacterium 21-64-5	0.83 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.33 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.17 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2.50 %
Candidatus Sulfopaludibacter sp. SbA4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	1.67 %
Paludibaculum fermentans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Paludibaculum → Paludibaculum fermentans	1.67 %
Hypocreomycetidae	subclass	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → sordariomyceta → Sordariomycetes → Hypocreomycetidae	0.83 %
Halococcus hamelinensis 100A6	strain	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Halobacteriales → Halococcaceae → Halococcus → Halococcus hamelinensis → Halococcus hamelinensis 100A6	0.83 %
Gloeocapsa	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Chroococcales → Chroococcaceae → Gloeocapsa	0.83 %
Saccharomonospora azurea	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharomonospora → Saccharomonospora azurea	0.83 %
Planctomycetia bacterium 21-64-5	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → unclassified Planctomycetia → Planctomycetia bacterium 21-64-5	0.83 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_101613538	All Organisms → cellular organisms → Bacteria → Acidobacteria	4430	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_105887167	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	1283	Open in IMG/M
3300000789\|JGI1027J11758_12628304	All Organisms → cellular organisms → Bacteria → Acidobacteria	976	Open in IMG/M
3300004080\|Ga0062385_10124673	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Chroococcales → Chroococcaceae → Gloeocapsa	1291	Open in IMG/M
3300005330\|Ga0070690_100723363	Not Available	766	Open in IMG/M
3300005334\|Ga0068869_100092391	All Organisms → cellular organisms → Bacteria	2278	Open in IMG/M
3300005365\|Ga0070688_100154238	All Organisms → cellular organisms → Bacteria → Acidobacteria	1572	Open in IMG/M
3300005436\|Ga0070713_100015997	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5629	Open in IMG/M
3300005436\|Ga0070713_100458645	All Organisms → cellular organisms → Bacteria → Acidobacteria	1198	Open in IMG/M
3300005447\|Ga0066689_10582831	Not Available	706	Open in IMG/M
3300005458\|Ga0070681_10792967	Not Available	864	Open in IMG/M
3300005529\|Ga0070741_11404119	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharomonospora → Saccharomonospora azurea	580	Open in IMG/M
3300005535\|Ga0070684_100670313	All Organisms → cellular organisms → Bacteria	966	Open in IMG/M
3300005535\|Ga0070684_101044795	All Organisms → cellular organisms → Bacteria → Acidobacteria	767	Open in IMG/M
3300005538\|Ga0070731_10483374	Not Available	824	Open in IMG/M
3300005549\|Ga0070704_101275686	Not Available	671	Open in IMG/M
3300005577\|Ga0068857_100807918	All Organisms → cellular organisms → Bacteria	896	Open in IMG/M
3300005614\|Ga0068856_100134642	All Organisms → cellular organisms → Bacteria	2476	Open in IMG/M
3300005617\|Ga0068859_102655762	Not Available	551	Open in IMG/M
3300005952\|Ga0080026_10101343	All Organisms → cellular organisms → Bacteria	803	Open in IMG/M
3300006050\|Ga0075028_100860182	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	556	Open in IMG/M
3300006237\|Ga0097621_100028520	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4399	Open in IMG/M
3300006893\|Ga0073928_10060275	All Organisms → cellular organisms → Bacteria → Proteobacteria	3357	Open in IMG/M
3300006893\|Ga0073928_10996893	Not Available	571	Open in IMG/M
3300009098\|Ga0105245_11440345	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	739	Open in IMG/M
3300009098\|Ga0105245_12120330	Not Available	616	Open in IMG/M
3300009148\|Ga0105243_10181243	All Organisms → cellular organisms → Bacteria	1832	Open in IMG/M
3300009174\|Ga0105241_10395122	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → sordariomyceta → Sordariomycetes → Hypocreomycetidae	1211	Open in IMG/M
3300009523\|Ga0116221_1360134	Not Available	631	Open in IMG/M
3300009551\|Ga0105238_12532063	All Organisms → cellular organisms → Bacteria	549	Open in IMG/M
3300009628\|Ga0116125_1001323	All Organisms → cellular organisms → Bacteria	10841	Open in IMG/M
3300009640\|Ga0116126_1254902	Not Available	549	Open in IMG/M
3300010373\|Ga0134128_11677996	All Organisms → cellular organisms → Bacteria → Proteobacteria	699	Open in IMG/M
3300010379\|Ga0136449_100139685	All Organisms → cellular organisms → Bacteria → Proteobacteria	4794	Open in IMG/M
3300010379\|Ga0136449_103154997	All Organisms → cellular organisms → Bacteria	638	Open in IMG/M
3300010379\|Ga0136449_103193998	Not Available	633	Open in IMG/M
3300010401\|Ga0134121_10344564	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	1331	Open in IMG/M
3300010403\|Ga0134123_11039748	Not Available	838	Open in IMG/M
3300011119\|Ga0105246_10764799	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Paludibaculum → Paludibaculum fermentans	853	Open in IMG/M
3300012199\|Ga0137383_11026021	Not Available	600	Open in IMG/M
3300012205\|Ga0137362_10167039	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1887	Open in IMG/M
3300012207\|Ga0137381_11360873	Not Available	602	Open in IMG/M
3300012210\|Ga0137378_11767534	All Organisms → cellular organisms → Bacteria	523	Open in IMG/M
3300012362\|Ga0137361_10193969	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1835	Open in IMG/M
3300012363\|Ga0137390_10698543	All Organisms → cellular organisms → Bacteria → Acidobacteria	977	Open in IMG/M
3300012582\|Ga0137358_10653260	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	704	Open in IMG/M
3300012917\|Ga0137395_10578045	All Organisms → cellular organisms → Bacteria	811	Open in IMG/M
3300012960\|Ga0164301_10774402	Not Available	731	Open in IMG/M
3300013104\|Ga0157370_10049676	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4014	Open in IMG/M
3300013306\|Ga0163162_10823237	Not Available	1045	Open in IMG/M
3300013306\|Ga0163162_12572241	Not Available	586	Open in IMG/M
3300013308\|Ga0157375_10758994	All Organisms → cellular organisms → Bacteria → Acidobacteria	1121	Open in IMG/M
3300013308\|Ga0157375_12914502	Not Available	572	Open in IMG/M
3300014156\|Ga0181518_10422431	Not Available	641	Open in IMG/M
3300014162\|Ga0181538_10494651	Not Available	644	Open in IMG/M
3300014162\|Ga0181538_10668385	Not Available	539	Open in IMG/M
3300014165\|Ga0181523_10067395	Not Available	2188	Open in IMG/M
3300014325\|Ga0163163_10023956	All Organisms → cellular organisms → Bacteria → Acidobacteria	5805	Open in IMG/M
3300015264\|Ga0137403_10984595	All Organisms → cellular organisms → Bacteria	691	Open in IMG/M
3300018034\|Ga0187863_10045737	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Halobacteriales → Halococcaceae → Halococcus → Halococcus hamelinensis → Halococcus hamelinensis 100A6	2519	Open in IMG/M
3300018034\|Ga0187863_10177480	All Organisms → cellular organisms → Bacteria	1187	Open in IMG/M
3300018043\|Ga0187887_10026588	All Organisms → cellular organisms → Bacteria	3677	Open in IMG/M
3300018089\|Ga0187774_10364258	All Organisms → cellular organisms → Bacteria → Acidobacteria	866	Open in IMG/M
3300020580\|Ga0210403_10201567	All Organisms → cellular organisms → Bacteria	1633	Open in IMG/M
3300020581\|Ga0210399_11296277	All Organisms → cellular organisms → Bacteria	574	Open in IMG/M
3300020581\|Ga0210399_11342560	Not Available	561	Open in IMG/M
3300021170\|Ga0210400_10638231	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	877	Open in IMG/M
3300021178\|Ga0210408_10237573	Not Available	1451	Open in IMG/M
3300021407\|Ga0210383_11788514	Not Available	501	Open in IMG/M
3300022557\|Ga0212123_10215627	All Organisms → cellular organisms → Bacteria	1408	Open in IMG/M
3300022726\|Ga0242654_10078884	Not Available	995	Open in IMG/M
3300025912\|Ga0207707_11326842	Not Available	577	Open in IMG/M
3300025928\|Ga0207700_10713920	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Paludibaculum → Paludibaculum fermentans	895	Open in IMG/M
3300025930\|Ga0207701_11460635	All Organisms → cellular organisms → Bacteria	555	Open in IMG/M
3300025935\|Ga0207709_10651612	Not Available	838	Open in IMG/M
3300025961\|Ga0207712_10362973	Not Available	1207	Open in IMG/M
3300026078\|Ga0207702_10080115	All Organisms → cellular organisms → Bacteria	2832	Open in IMG/M
3300027660\|Ga0209736_1043972	All Organisms → cellular organisms → Bacteria	1288	Open in IMG/M
3300027842\|Ga0209580_10417887	All Organisms → cellular organisms → Bacteria → Acidobacteria	668	Open in IMG/M
3300027869\|Ga0209579_10641917	Not Available	575	Open in IMG/M
3300027986\|Ga0209168_10017624	Not Available	4084	Open in IMG/M
3300029636\|Ga0222749_10669418	Not Available	568	Open in IMG/M
3300029882\|Ga0311368_10164744	All Organisms → cellular organisms → Bacteria	1795	Open in IMG/M
3300029910\|Ga0311369_10110676	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → unclassified Planctomycetia → Planctomycetia bacterium 21-64-5	2740	Open in IMG/M
3300030617\|Ga0311356_11004095	All Organisms → cellular organisms → Bacteria	779	Open in IMG/M
3300031090\|Ga0265760_10053331	Not Available	1220	Open in IMG/M
3300031234\|Ga0302325_10326386	All Organisms → cellular organisms → Bacteria → Acidobacteria	2463	Open in IMG/M
3300031234\|Ga0302325_11093649	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1075	Open in IMG/M
3300031250\|Ga0265331_10291562	Not Available	731	Open in IMG/M
3300031708\|Ga0310686_108477113	All Organisms → cellular organisms → Bacteria	766	Open in IMG/M
3300031716\|Ga0310813_11565028	Not Available	615	Open in IMG/M
3300031718\|Ga0307474_10165283	All Organisms → cellular organisms → Bacteria → Acidobacteria	1675	Open in IMG/M
3300031823\|Ga0307478_10052733	All Organisms → cellular organisms → Bacteria → Acidobacteria	3021	Open in IMG/M
3300031938\|Ga0308175_103086405	Not Available	518	Open in IMG/M
3300032160\|Ga0311301_10632798	All Organisms → cellular organisms → Bacteria	1529	Open in IMG/M
3300032160\|Ga0311301_12200082	Not Available	633	Open in IMG/M
3300033480\|Ga0316620_10060829	All Organisms → cellular organisms → Bacteria	2650	Open in IMG/M
3300033486\|Ga0316624_11655968	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	590	Open in IMG/M
3300033513\|Ga0316628_101595218	All Organisms → cellular organisms → Bacteria	869	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	81.67%
Host-Associated	Host-Associated	18.33%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	69.17%
Plants	Host-Associated → Plants	18.33%
Aquatic	Environmental → Aquatic	12.50%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	65.00%
Rhizosphere	Host-Associated → Plants → Rhizosphere	10.83%
Freshwater	Environmental → Aquatic → Freshwater	9.17%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.83%
Peat	Environmental → Terrestrial → Peat	4.17%
Thermal Springs	Environmental → Aquatic → Thermal Springs	2.50%
Roots	Host-Associated → Plants → Roots	1.67%
Sediment	Environmental → Aquatic → Sediment	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	48.33%
Loam	Environmental → Terrestrial → Soil → Loam	12.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.00%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	9.17%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.83%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.17%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	4.17%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	2.50%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.67%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.83%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	27.50%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	15.83%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	11.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.00%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	7.50%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.83%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.17%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	4.17%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.33%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	2.50%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.67%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.67%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.83%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.83%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.83%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	13.33%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	8.33%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	7.50%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.67%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	5.00%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	4.17%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	4.17%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	3.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.33%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	3.33%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	2.50%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	2.50%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.50%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.50%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.50%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.50%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.67%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.67%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.67%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.67%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.67%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.67%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.83%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.83%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.83%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.83%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.83%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.83%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.83%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005533	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005952	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009628	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_10	Environmental	Open in IMG/M
3300009640	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_40	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014156	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_60_metaG	Environmental	Open in IMG/M
3300014162	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaG	Environmental	Open in IMG/M
3300014165	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaG	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300018089	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MG	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027660	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027826	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027986	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300029882	III_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029910	III_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030617	II_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300031090	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031250	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG	Host-Associated	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300033480	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D5_B	Environmental	Open in IMG/M
3300033486	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_A	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.40
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.40
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F073707

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1016135385	3300000364	Soil	MGLRRFLLWLIIVAVLLIGLLLYRSRSGNNLSITPEAEQEIEKAKRR*
INPhiseqgaiiFebDRAFT_1058871672	3300000364	Soil	LLWLIVTALLVTGFAIYRSRSTRLNVTPDAAREIEKAKRR*
JGI1027J11758_126283041	3300000789	Soil	VRRALLWLIVTALLVTGFAIYRSRSTRLNVTPDAAREIEKAKRR
Ga0062385_101246731	3300004080	Bog Forest Soil	MWVILMKRILPWLIGAAVLVIGFAFYRSRSRSHLNVDPHALEEIERAKRR*
Ga0062384_1007861661	3300004082	Bog Forest Soil	MRRILLWSIVAAILLAAVVYFARSRNHLDVTPDAAREIEKAKQR*
Ga0070690_1007233632	3300005330	Switchgrass Rhizosphere	LLWLIVTALLVTGFVIYRSRSTRLNVTPDAAREIEKAKRR*
Ga0068869_1000923913	3300005334	Miscanthus Rhizosphere	VKQLSVKQLLLWLVVAAVVLIGFLLYRGTSGNHLDVTPDAEREIEKAKRR*
Ga0070688_1001542382	3300005365	Switchgrass Rhizosphere	LLWLIVTALLVTGFLVYRSRSKTRLNVTPDAAREIEKAKRQ*
Ga0070709_100392203	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	VRKLVVLVIVLAILLIAVMVYRSRSTRQLNVDPDAAREIEKAKRR*
Ga0070713_1000042885	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	VRKLVVLVIVLAILLIAVMVYRSRSTRQLNVDPDAAREIEKTKRR*
Ga0070713_1000159973	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MKRSLLWLIVVAALLAGWLLYRFKSGSDLNVTPDAAQEIEKAERR*
Ga0070713_1004586452	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	VKRILLWLVIAGILVIALVLYRSRSRSNLNVAPDAEREIEKAKRK*
Ga0070711_1000513391	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	VRKLVVLLIVLAILLIAVMVYRSRSTRQLNVDPDAAREIEKAKRR*
Ga0066689_105828312	3300005447	Soil	VKRILVWLIVTAALLIAFVLYRSRSGSNLNIEPHAREVIEKAKGR*
Ga0070681_107929672	3300005458	Corn Rhizosphere	MNRILLWLIVALALLIGFVLYRSHSATKLNVTPEAEREIEKAKRR*
Ga0070741_114041191	3300005529	Surface Soil	LSYFGGVKRTWVWLIVAAALVIGFVLYRSSSGRKQLNVTPDAEREIEKAKRR*
Ga0070734_100358723	3300005533	Surface Soil	LIAVALMVVLLLAFILYRSRSADQLEVDPHAAKEIEKAKRR*
Ga0070684_1006703131	3300005535	Corn Rhizosphere	MTRILLWLIVAAVLVIGFLFYRSQPRDRLNVTSYAEQEIERAKR
Ga0070684_1010447952	3300005535	Corn Rhizosphere	MKRSLLWLIVVAALLAGWLLYRFKSGSDLIVTPDAAQEIEKAERR*
Ga0070730_104041852	3300005537	Surface Soil	VKKLVVLLIVVAILLIGVIVYRARSTRQLDVDPDAAREIEKAKRR*
Ga0070731_104833742	3300005538	Surface Soil	VKRILLRLTVAAALVIGFVLYRSRKRSDLNVEPNAREVIEKAKRR*
Ga0070732_103414542	3300005542	Surface Soil	VKKMLPWLIALAILLIGVVVYRARSTRRLNVDPAAAREIEKAKQR*
Ga0070704_1012756861	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	VVPVRRALLWLIVTALLVTGFVIYRSRSTRLNVTPDAAREIEKAKRR*
Ga0068857_1008079181	3300005577	Corn Rhizosphere	VKQLLLWLIVAAVLMVGFLLYRSRSRGSLNVTPDAQQEIEQGKAAVVD
Ga0068856_1001346424	3300005614	Corn Rhizosphere	MKRSLLWLIVVAALLGGWLLYRFKSGSDLNVTPDAAQEIEKAERR*
Ga0068859_1026557622	3300005617	Switchgrass Rhizosphere	VKQLLLWLVVAAVVLIGFLLYRGTSGNHLDVTPDAEREIEKAKRR*
Ga0080026_101013432	3300005952	Permafrost Soil	VKRILIWFIVAAVLAIGFVLYRSRPASRLDVPQDAQREIERAKQR*
Ga0075028_1008601822	3300006050	Watersheds	VKRTLLRLIVAAALIIAFVWYRSRPRMRLNVTPDAARKIEKAKRR*
Ga0097621_1000285207	3300006237	Miscanthus Rhizosphere	MKRALLWLIVAAGLVAGLLLYRSRSGSDLNITPEASQEIEKAKRR*
Ga0073928_100602754	3300006893	Iron-Sulfur Acid Spring	VKRILLWLIVIAVLVIGFVLYRSRSGSHLNVAPDAQREIDKAKRR*
Ga0073928_109968932	3300006893	Iron-Sulfur Acid Spring	MKRVLLWLIVAALLVIGFVLYRARSGSDLNVTRDAADEIEKAKRR*
Ga0075426_114906603	3300006903	Populus Rhizosphere	VLIALIALALLLIGFILYRSRSTNQLDVDPEAAREIEKAKRR*
Ga0099830_109205181	3300009088	Vadose Zone Soil	VRRLVVLLIVAAILLIGVVVYRSRSTRQLNVDPDAAREIEKAKLR*
Ga0105245_114403452	3300009098	Miscanthus Rhizosphere	LIVAAILLAGLLLYRSQSGSTLNVTPDAAREIEGAKRR*
Ga0105245_121203302	3300009098	Miscanthus Rhizosphere	MTRALLWLIGGVVLLIAFVLYRSTSVSDLNVTPDAAREIDGARRR*
Ga0105243_101812431	3300009148	Miscanthus Rhizosphere	VKQLLLWLVLAVVVLIGFLLYRAASGNHLDVTPDARREIEKAKRR*
Ga0105241_103951223	3300009174	Corn Rhizosphere	VKRRLLWLIVAAILLAGLVLYRSRSGSTLNVTPDAAREIERAKQR*
Ga0116221_13601341	3300009523	Peatlands Soil	MKRAMLWLIAAAVLLVAFLVYRSRSGSDFQVTPDAAREIERAKRR*
Ga0105238_125320632	3300009551	Corn Rhizosphere	MKRALLWLSFAAALAIAFMLYRSWSGTRLNVTPDARREIEKAKRR*
Ga0116125_10013239	3300009628	Peatland	MKKILLWLVVVAVLVIGFVVYRSRSRNHLDVTPDARREIEKAKRR*
Ga0116126_12549022	3300009640	Peatland	AMRLLPHAVLEIGFVLYRSLLGIHLNLTPDAERKIEKARRR*
Ga0126372_121529341	3300010360	Tropical Forest Soil	VRKALVALIAVAILLIAYAVYRSRSDGLNVDPDAAKEIEKAKRR*
Ga0134128_116779962	3300010373	Terrestrial Soil	KHTLIWLIATAILMTGLVLYRSQSRGHLNVTPDAEREIEKARRR*
Ga0136449_1001396854	3300010379	Peatlands Soil	VKRLLLWFFVAVLAIAFVLHRSRSGMRLKVTPDAEREIEKAKRR*
Ga0136449_1031549972	3300010379	Peatlands Soil	MRKILVWLIVAAVLVIGFVLYRSWSGNRLDVTPDAEHEIEKAKRR*
Ga0136449_1031939981	3300010379	Peatlands Soil	GRTTNMETDRSMKRILLWLIFAAVLVIGFVLYSSWSATQLNVTPDAEHEIEKAKRR*
Ga0134121_103445642	3300010401	Terrestrial Soil	LLIVTILLVTVFVIYRSRSTRLNVTPDAAREIEKAKRR*
Ga0134123_110397482	3300010403	Terrestrial Soil	MRLFLAIILIALLLITFRVYRSRSASHLNVTPDAEREIEKAKRR*
Ga0105246_107647992	3300011119	Miscanthus Rhizosphere	MKRALLWLIVAAGLVAGLLLYRSRSGNDLNITPDASQEIEKAKRR*
Ga0137383_110260211	3300012199	Vadose Zone Soil	MKAGPTPMKKILLWIIVVAALALGFVLYRSRSRTHLNVTPDAEREIEKAKRR*
Ga0137362_101670393	3300012205	Vadose Zone Soil	MKKILPWIIIVAALAIGFVVYRSRSGTHLNVTPDAEREIEKAKRR*
Ga0137381_113608731	3300012207	Vadose Zone Soil	MKRILLWLIVAAALVIGFVFYRSRSGSNLNVTPDAEPEIEKAKRR*
Ga0137378_117675342	3300012210	Vadose Zone Soil	MKKILIFVIVAAVLLIVFGVYRSRSRDHLDITPDAKREIEKAKRR*
Ga0137361_101939691	3300012362	Vadose Zone Soil	PIPAGTTMEWVHLKHTLLWLIVAAVLVIGFVLYRSRSRTHLNVTPDAEREIEKAKRR*
Ga0137390_106985432	3300012363	Vadose Zone Soil	VVHVKGILLWLIVAALLVMGFVLYRSRSGNHLNVTPDAEREIEKAKRR*
Ga0137358_106532602	3300012582	Vadose Zone Soil	MKAGPTPMKKILLWIIVVAALAIGFVLYRSRSRTHLNVTPDAEREIEKAKRR*
Ga0137395_105780453	3300012917	Vadose Zone Soil	MKAGPMLMKKILLWLIVAAALMIGFALYRSRSGTHLNVTPDAE
Ga0164301_107744022	3300012960	Soil	MKRTVFWLIVAALLVLGLMVYRSRSRSDLNVAPDAAEEIEKAKRR*
Ga0157370_100496763	3300013104	Corn Rhizosphere	MKRTLLWLIVAAALVLAFLLYHSHSATKLNVTPDAEREIEKAKRR*
Ga0163162_108232373	3300013306	Switchgrass Rhizosphere	VKQLLLWLVLAVVVLIGFLLYRAASGNHLDVTPDAEREIEKAKRR*
Ga0163162_125722412	3300013306	Switchgrass Rhizosphere	MNRILLWLIIALVLMIGFVLYRSHSTTKLNVTPDAQRE
Ga0157375_107589942	3300013308	Miscanthus Rhizosphere	VRSALLWLIVTALLVTGFVIYRSRSTRLNVTPDAAREIEKAKRR*
Ga0157375_129145021	3300013308	Miscanthus Rhizosphere	MKQLLLWLVVAVVVLIGFLLYRASSENHLNVAPEAEREIEKAKRR*
Ga0181518_104224312	3300014156	Bog	LGDVKRTVLWLIVAAILAIGFVLHRSRAGSNLNVTPDAAREIEKAKRR*
Ga0181538_104946511	3300014162	Bog	NLSDVKRTVNWVIAAAILVIAFVLYRSRSGSNLNVTPDAAPEIEKVKQR*
Ga0181538_106683851	3300014162	Bog	LNRTLSWLIVAAALLIGLVLYHSRSRNHLDVTPDAEREIEKAKRR*
Ga0181523_100673951	3300014165	Bog	SEPPLNRTLSWLIVAAALLIGLALYHSRSRNHLDVTPDAEREIEKAKRR*
Ga0163163_100239567	3300014325	Switchgrass Rhizosphere	MKRALLWLIVAAGLVAGLLLYRSRSGSDLNITPDASQEIEKAKRR*
Ga0137403_109845951	3300015264	Vadose Zone Soil	VGDLNLKRILLLIIVAGLIAIGFLLFRSRPADRLDVTPDAAREIEKAKGR*
Ga0187863_100457373	3300018034	Peatland	MKKILLWLVVVAVLVIGFVVYRSRSRNHLDVTPDARREIEKAKRR
Ga0187863_101774803	3300018034	Peatland	YGRPLKRIVLWLIVAVVLVAGFVVFHSRSGPHLNVTPDAAREIEKAKRR
Ga0187887_100265882	3300018043	Peatland	MKKILLWLIVAAMLVIGFAVYRSRSRNHLDVTPDAQREIERAKRR
Ga0187774_103642581	3300018089	Tropical Peatland	VKQALLWLFVVVLVIAFVFYRSRPRIHLNVTPEAER
Ga0210407_103627671	3300020579	Soil	VLLIVVAILLIVAMVYRSRSTRELNVDPDAAREIEKAKRH
Ga0210407_106713902	3300020579	Soil	VRKFAVLLIVLAILLIAVMVYRSRSTRQLNVDPDASREIEKT
Ga0210403_102015673	3300020580	Soil	MKRALLWLIVAAVLLIGFVLYRARSGSDLNVTPDAAREIEKAKRR
Ga0210399_112569512	3300020581	Soil	VRKFVVLLIVLAILLIVMVYRSKSTRQLNVDPDAAREIEKAKRR
Ga0210399_112962772	3300020581	Soil	MKRILLFLILIAVLVIGLMLYRSRSGRLNVTPDAEREIEKAKRR
Ga0210399_113425602	3300020581	Soil	MKRVLLWLIVAAVLVIGFVLYRARSGSGPNVTPDAAQEIEKAMRR
Ga0210406_107183451	3300021168	Soil	VKKFVVLLIVLASLLIAVIVYRSRSTRQLNVDPDAAQEIEKA
Ga0210400_102058202	3300021170	Soil	VKKFVVLLIVLASLLIAVIVYRSRSTRQLNVDPDAAQEIEKAKRR
Ga0210400_106382312	3300021170	Soil	VKQILLWLIVALVLVIGFLLYRSRSGDHLNVTPEAQREIEKAERR
Ga0210408_102375732	3300021178	Soil	MNRVLLWLIVAAVLVIGFVLYRSRSGGDLNVTPEAEQEIERAKRR
Ga0210383_117885141	3300021407	Soil	LNVKRILLWLILAAVLAIGFLVYRSRSESHLDVTPDAAREIEKAKRR
Ga0210384_106518622	3300021432	Soil	VRKFVVLLIVVAILLIVAMVYRSRSTRELNVDPDAAREIEKAKRH
Ga0210402_109267731	3300021478	Soil	VRKLVVLLIVLAILLIAVMVYRSRSTRQLNVDPDAAREIEKAKRR
Ga0210409_101420163	3300021559	Soil	VRKFAVLLIVLAILLIAVMVYRSRSTRQLNVDPDASREIEKTKRR
Ga0212123_102156272	3300022557	Iron-Sulfur Acid Spring	VKRILLWLIVIAVLVIGFVLYRSRSGSHLNVAPDAQREIDKAKRR
Ga0242654_100788842	3300022726	Soil	KRILLWLILAAALIIGVMFYRSRSGSRLDITPDAAREIEKAKQR
Ga0207707_113268421	3300025912	Corn Rhizosphere	ILLWLIVALALLIGFVLYRSHSATKLNVTPEAEREIEKAKRR
Ga0207663_102298471	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	VRKLVVLVIVLAILLIAVMVYRSRSTRQLNVDPDA
Ga0207700_107139202	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MKRSLLWLIVVAALLAGWLLYRFKSGSDLNVTPDAAQEIEKAERR
Ga0207701_114606352	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	LLWLIVTALLVTGFVIYRSRSTRLNVTPDAAREIEKAKRR
Ga0207709_106516121	3300025935	Miscanthus Rhizosphere	VKQLLLWLVLAVVVLIGFLLYRAASGNHLDVTPDARREIEKAKRR
Ga0207712_103629731	3300025961	Switchgrass Rhizosphere	VKQLLLWLVVAAVVLIGFLLYRGTSGNHLDVTPDAEREIEKAKRR
Ga0207702_100801152	3300026078	Corn Rhizosphere	MKRSLLWLISVAALLAGWLLYRFKSGSDLNVTPDAAQEIEKAERR
Ga0209736_10439722	3300027660	Forest Soil	LKYIVAAVLVIGFVLYRSHSATKLNVTPDAEREIEKAKRR
Ga0209060_101072423	3300027826	Surface Soil	LIAVALMVVLLLAFILYRSRSADQLEVDPHAAKEIEKAKRR
Ga0209580_104178871	3300027842	Surface Soil	MKRIILFLGLIAVLVIGLMLYRSRSGHLDVTPDAEREIEKAKRR
Ga0209579_106419172	3300027869	Surface Soil	VKRILLRLTVAAALVIGFVLYRSRKRSDLNVEPNAREVIEKAKRR
Ga0209168_100176242	3300027986	Surface Soil	VKRTVLWLIVVAALFIAFLLYRSRSGDKLDVAPGAEREIEKARRR
Ga0222749_106694181	3300029636	Soil	MKRIILFPILIAALVVGLMLYRSRSGRLNVTPDAEREIEKAKRR
Ga0311368_101647442	3300029882	Palsa	MKRILLLVIAAAALIIGILIYRSHTRTHLDVTPEAEREIEKAKRR
Ga0311369_101106764	3300029910	Palsa	KTRGMKRILLLVIAAAALIIGILIYRSHTRTHLDVTPEAEREIEKAKRR
Ga0311356_110040952	3300030617	Palsa	MKRILLLVIAAAALIIGYLIYRSHTRTHLDVTPEAEREIEKAKRR
Ga0265760_100533311	3300031090	Soil	NCKIQGVSNMNRILLWLILAAVLVIGFLLYRSRSEPHLDVTPDAAREIEKAKRR
Ga0302325_103263861	3300031234	Palsa	MSNVNRILLWLILASLLAIGFLLYRSRSGPRWDVTPDAAREIEKAKR
Ga0302325_110936493	3300031234	Palsa	MKRILLWLLVAATLVIALIVCRSWSDSDVNVTPDAAREIEKAKRR
Ga0265331_102915622	3300031250	Rhizosphere	LGDVKRTVIWLIAAAILVVAFVLYRFQSGSNLNVTPGAAREIEKAKRR
Ga0310686_1084771133	3300031708	Soil	MAHAKRILFWLIVAAVSVVGFLLYRSQSRSSLNVTPNAREVIEKAKRR
Ga0310813_115650282	3300031716	Soil	MKWDVPVRRALLWLIVAALLVTGFIVYRSRSTRLNVTPDAAREIEKAKRR
Ga0307474_101652832	3300031718	Hardwood Forest Soil	WLIVAVILVIGFAVYRSRSRNHLEVTPEAGREIERAKRR
Ga0307475_102341463	3300031754	Hardwood Forest Soil	VRRLVVLLIVLAILLIGVIVYRSRSSRQLNVDPDAAREIEKAKRH
Ga0307478_100527332	3300031823	Hardwood Forest Soil	MKKILVWLIVAVILVIGFAVYRSRSRNHLEVTPEAGREIERAKRR
Ga0308175_1030864052	3300031938	Soil	MKRPLLWLIVGAILLVSFALYRSHSGSDLQVTPDAAREIEKAKRR
Ga0311301_106327982	3300032160	Peatlands Soil	VKRLLLWFFVAVLAIAFVLHRSRSGMRLKVTPDAEREIEKAKRR
Ga0311301_122000822	3300032160	Peatlands Soil	GRTTNMETDRSMKRILLWLIFAAVLVIGFVLYSSWSATQLNVTPDAEHEIEKAKRR
Ga0316620_100608293	3300033480	Soil	LKRTLLWLIVAAVLVIGFLLYRSRSGSNLNVTPDAEREIEKAKRR
Ga0316624_116559682	3300033486	Soil	LKRTLLWLIVAAVLVIGFLLYRSRSGRNLNVTPDAEREIEKAKRR
Ga0316628_1015952182	3300033513	Soil	MKRTLLWVLVAAILLVGFLLYRSQSGSDLNVTPDAAQEIEKAKRR

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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