Metagenome / Metatranscriptome Family F073615

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F073615
Family Type	Metagenome / Metatranscriptome
Number of Sequences	120
Average Sequence Length	129 residues
Representative Sequence	MSNRSLVMWLILGVLSLPVGMRSEDNASCSNATLHGSYAFHATGERFAAVARFTFDGRGGLTATFFGRSPGNPFGPIEFTGTYSVSPDCIVTDEWLDSIHHSVVYGKGKGYFILNSSPDGDPTQDTVNSGEGRRQ
Number of Associated Samples	105
Number of Associated Scaffolds	120

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	55.46 %
% of genes near scaffold ends (potentially truncated)	38.33 %
% of genes from short scaffolds (< 2000 bps)	79.17 %
Associated GOLD sequencing projects	89
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.63

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (88.333 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere (9.167 % of family members)
Environment Ontology (ENVO)	Unclassified (45.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (64.167 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 18.40% β-sheet: 43.56% Coil/Unstructured: 38.04%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.63
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.63
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 120 Family Scaffolds
PF01569	PAP2	8.33
PF00196	GerE	4.17
PF07040	DUF1326	3.33
PF00486	Trans_reg_C	2.50
PF07676	PD40	1.67
PF00239	Resolvase	0.83
PF07589	PEP-CTERM	0.83
PF12836	HHH_3	0.83
PF14534	DUF4440	0.83
PF04012	PspA_IM30	0.83
PF00753	Lactamase_B	0.83
PF12893	Lumazine_bd_2	0.83
PF01804	Penicil_amidase	0.83
PF13561	adh_short_C2	0.83
PF12695	Abhydrolase_5	0.83
PF03781	FGE-sulfatase	0.83
PF13620	CarboxypepD_reg	0.83
PF03544	TonB_C	0.83
PF13565	HTH_32	0.83
PF02371	Transposase_20	0.83
PF13518	HTH_28	0.83
PF14559	TPR_19	0.83
PF01471	PG_binding_1	0.83
PF00801	PKD	0.83

COG ID	Name	Functional Category	% Frequency in 120 Family Scaffolds
COG5588	Uncharacterized conserved protein, DUF1326 domain	Function unknown [S]	3.33
COG1842	Phage shock protein A	Transcription [K]	1.67
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	0.83
COG1262	Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain	Posttranslational modification, protein turnover, chaperones [O]	0.83
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.83
COG2366	Acyl-homoserine lactone (AHL) acylase PvdQ	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.83
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	0.83
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	88.33 %
Unclassified	root	N/A	11.67 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	88.33 %
Unclassified	root	N/A	11.67 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	88.33 %
Unclassified	root	N/A	11.67 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	73.33 %
Unclassified	root	N/A	11.67 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.50 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	70.83 %
Unclassified	root	N/A	11.67 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.67 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	70.83 %
Unclassified	root	N/A	11.67 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.83 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.83 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	70.83 %
Unclassified	root	N/A	11.67 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.83 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.83 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	70.83 %
Unclassified	root	N/A	11.67 %
Paraburkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia	0.83 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.83 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	70.83 %
Unclassified	root	N/A	11.67 %
Paraburkholderia nodosa	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia nodosa	0.83 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2228664021\|ICCgaii200_c0471334	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	766	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101772412	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	886	Open in IMG/M
3300000789\|JGI1027J11758_12925154	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	660	Open in IMG/M
3300000890\|JGI11643J12802_11316214	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	517	Open in IMG/M
3300003267\|soilL1_10166985	All Organisms → cellular organisms → Bacteria	3052	Open in IMG/M
3300003321\|soilH1_10065288	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	3317	Open in IMG/M
3300003321\|soilH1_10291061	All Organisms → cellular organisms → Bacteria	1694	Open in IMG/M
3300004114\|Ga0062593_100111892	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1962	Open in IMG/M
3300004156\|Ga0062589_100257149	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1314	Open in IMG/M
3300004156\|Ga0062589_100790162	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	858	Open in IMG/M
3300004157\|Ga0062590_100624288	Not Available	953	Open in IMG/M
3300004463\|Ga0063356_101763787	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	928	Open in IMG/M
3300004479\|Ga0062595_100656161	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	832	Open in IMG/M
3300004480\|Ga0062592_100464885	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1032	Open in IMG/M
3300004480\|Ga0062592_100618849	Not Available	924	Open in IMG/M
3300005093\|Ga0062594_103415623	Not Available	500	Open in IMG/M
3300005289\|Ga0065704_10805233	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	504	Open in IMG/M
3300005293\|Ga0065715_10480115	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	798	Open in IMG/M
3300005294\|Ga0065705_10964394	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	557	Open in IMG/M
3300005295\|Ga0065707_10353960	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	914	Open in IMG/M
3300005332\|Ga0066388_101883059	All Organisms → cellular organisms → Bacteria	1067	Open in IMG/M
3300005332\|Ga0066388_102794805	Not Available	892	Open in IMG/M
3300005336\|Ga0070680_101645691	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	556	Open in IMG/M
3300005338\|Ga0068868_101086135	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	736	Open in IMG/M
3300005339\|Ga0070660_100710284	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	843	Open in IMG/M
3300005345\|Ga0070692_10309961	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	967	Open in IMG/M
3300005347\|Ga0070668_101934332	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	543	Open in IMG/M
3300005355\|Ga0070671_101072623	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	707	Open in IMG/M
3300005366\|Ga0070659_100025939	All Organisms → cellular organisms → Bacteria	4508	Open in IMG/M
3300005455\|Ga0070663_101178879	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	672	Open in IMG/M
3300005458\|Ga0070681_11727150	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	552	Open in IMG/M
3300005518\|Ga0070699_101633598	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	590	Open in IMG/M
3300005539\|Ga0068853_102483378	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	502	Open in IMG/M
3300005546\|Ga0070696_100642056	All Organisms → cellular organisms → Bacteria	860	Open in IMG/M
3300005563\|Ga0068855_102270229	Not Available	544	Open in IMG/M
3300005564\|Ga0070664_100235131	All Organisms → cellular organisms → Bacteria	1643	Open in IMG/M
3300005578\|Ga0068854_100320886	All Organisms → cellular organisms → Bacteria	1259	Open in IMG/M
3300005614\|Ga0068856_100489412	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1251	Open in IMG/M
3300005616\|Ga0068852_100364572	All Organisms → cellular organisms → Bacteria	1414	Open in IMG/M
3300005834\|Ga0068851_10640947	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	650	Open in IMG/M
3300006358\|Ga0068871_101294870	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	685	Open in IMG/M
3300006755\|Ga0079222_11722146	Not Available	602	Open in IMG/M
3300006804\|Ga0079221_10019227	All Organisms → cellular organisms → Bacteria	2757	Open in IMG/M
3300006806\|Ga0079220_10639910	Not Available	766	Open in IMG/M
3300006852\|Ga0075433_10016909	All Organisms → cellular organisms → Bacteria	6027	Open in IMG/M
3300006914\|Ga0075436_101328141	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia nodosa	544	Open in IMG/M
3300009093\|Ga0105240_10584737	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1231	Open in IMG/M
3300009162\|Ga0075423_10028689	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5608	Open in IMG/M
3300009174\|Ga0105241_10324442	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1329	Open in IMG/M
3300009174\|Ga0105241_11144727	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	734	Open in IMG/M
3300009177\|Ga0105248_10460290	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1434	Open in IMG/M
3300009545\|Ga0105237_10154428	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2292	Open in IMG/M
3300009551\|Ga0105238_10126976	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2529	Open in IMG/M
3300010046\|Ga0126384_10006902	All Organisms → cellular organisms → Bacteria → Proteobacteria	6958	Open in IMG/M
3300010047\|Ga0126382_10951152	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	748	Open in IMG/M
3300010373\|Ga0134128_10212548	All Organisms → cellular organisms → Bacteria	2175	Open in IMG/M
3300010373\|Ga0134128_10508511	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1343	Open in IMG/M
3300010373\|Ga0134128_12961548	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	522	Open in IMG/M
3300010375\|Ga0105239_10291269	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1838	Open in IMG/M
3300010376\|Ga0126381_100346776	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2051	Open in IMG/M
3300010397\|Ga0134124_10200874	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1810	Open in IMG/M
3300010398\|Ga0126383_10398139	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1413	Open in IMG/M
3300010400\|Ga0134122_10594250	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1021	Open in IMG/M
3300010400\|Ga0134122_12611456	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	556	Open in IMG/M
3300011270\|Ga0137391_11359545	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	557	Open in IMG/M
3300012201\|Ga0137365_11106446	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	570	Open in IMG/M
3300012209\|Ga0137379_10868066	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	807	Open in IMG/M
3300012989\|Ga0164305_10574323	Not Available	901	Open in IMG/M
3300013102\|Ga0157371_10452969	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	944	Open in IMG/M
3300013105\|Ga0157369_10366682	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1495	Open in IMG/M
3300013296\|Ga0157374_10047466	All Organisms → cellular organisms → Bacteria	3982	Open in IMG/M
3300013297\|Ga0157378_11323453	Not Available	762	Open in IMG/M
3300013307\|Ga0157372_10915904	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1017	Open in IMG/M
3300013307\|Ga0157372_12561216	Not Available	585	Open in IMG/M
3300014497\|Ga0182008_10214294	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	984	Open in IMG/M
3300015077\|Ga0173483_10787872	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	547	Open in IMG/M
3300015262\|Ga0182007_10020715	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2346	Open in IMG/M
3300015265\|Ga0182005_1058479	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1052	Open in IMG/M
3300015371\|Ga0132258_10029973	All Organisms → cellular organisms → Bacteria → Acidobacteria	12135	Open in IMG/M
3300015371\|Ga0132258_10063268	Not Available	8542	Open in IMG/M
3300015371\|Ga0132258_10201189	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4832	Open in IMG/M
3300015371\|Ga0132258_10271164	All Organisms → cellular organisms → Bacteria	4159	Open in IMG/M
3300015371\|Ga0132258_10818824	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2348	Open in IMG/M
3300015372\|Ga0132256_100369150	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1532	Open in IMG/M
3300015372\|Ga0132256_100445178	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1402	Open in IMG/M
3300015372\|Ga0132256_103802994	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	508	Open in IMG/M
3300015374\|Ga0132255_100215585	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2724	Open in IMG/M
3300019356\|Ga0173481_10755278	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	532	Open in IMG/M
3300019361\|Ga0173482_10314352	Not Available	695	Open in IMG/M
3300020579\|Ga0210407_10001956	All Organisms → cellular organisms → Bacteria	18334	Open in IMG/M
3300020581\|Ga0210399_11046570	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	655	Open in IMG/M
3300021168\|Ga0210406_10148500	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1968	Open in IMG/M
3300021445\|Ga0182009_10102407	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1308	Open in IMG/M
3300022508\|Ga0222728_1105698	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	538	Open in IMG/M
3300025321\|Ga0207656_10567223	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	579	Open in IMG/M
3300025909\|Ga0207705_10412576	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1045	Open in IMG/M
3300025913\|Ga0207695_10872447	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	780	Open in IMG/M
3300025914\|Ga0207671_10083232	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2402	Open in IMG/M
3300025919\|Ga0207657_10602677	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	857	Open in IMG/M
3300025926\|Ga0207659_11290845	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	627	Open in IMG/M
3300025931\|Ga0207644_10736340	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	823	Open in IMG/M
3300025933\|Ga0207706_10141893	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2113	Open in IMG/M
3300025941\|Ga0207711_11962914	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	528	Open in IMG/M
3300025945\|Ga0207679_10320761	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1341	Open in IMG/M
3300025949\|Ga0207667_11696714	Not Available	598	Open in IMG/M
3300025972\|Ga0207668_11840621	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	546	Open in IMG/M
3300026023\|Ga0207677_11918131	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	550	Open in IMG/M
3300026041\|Ga0207639_12227379	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	509	Open in IMG/M
3300026078\|Ga0207702_10791475	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	937	Open in IMG/M
3300026118\|Ga0207675_101889495	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	616	Open in IMG/M
3300026142\|Ga0207698_10785724	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	953	Open in IMG/M
3300027552\|Ga0209982_1063375	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	603	Open in IMG/M
3300027617\|Ga0210002_1038183	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	811	Open in IMG/M
3300027654\|Ga0209799_1000860	All Organisms → cellular organisms → Bacteria → Proteobacteria	5771	Open in IMG/M
3300027862\|Ga0209701_10107204	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1741	Open in IMG/M
3300027876\|Ga0209974_10080789	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1118	Open in IMG/M
3300031716\|Ga0310813_11869931	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	565	Open in IMG/M
3300031962\|Ga0307479_10187887	All Organisms → cellular organisms → Bacteria	2033	Open in IMG/M
3300032180\|Ga0307471_100525179	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1335	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	54.17%
Environmental	Environmental	45.83%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	54.17%
Terrestrial	Environmental → Terrestrial	45.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	45.83%
Rhizosphere	Host-Associated → Plants → Rhizosphere	31.67%
Rhizoplane	Host-Associated → Plants → Rhizoplane	21.67%
Roots	Host-Associated → Plants → Roots	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	39.17%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	18.33%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	15.00%
Soil	Host-Associated → Plants → Rhizosphere → Soil	13.33%
Loam	Environmental → Terrestrial → Soil → Loam	6.67%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	6.67%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.33%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	18.33%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	15.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	13.33%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	11.67%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	6.67%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.83%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.17%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.33%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.50%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.83%

Habitat	Taxonomy	Distribution
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	9.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	6.67%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	6.67%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	6.67%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	5.00%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	5.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.17%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.33%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.33%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	3.33%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	3.33%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.33%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.50%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	2.50%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.50%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.50%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.50%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	2.50%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	2.50%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	1.67%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.67%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.67%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.67%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.67%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300003267	Sugarcane bulk soil Sample L1	Environmental	Open in IMG/M
3300003321	Sugarcane bulk soil Sample H1	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005834	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015262	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG	Host-Associated	Open in IMG/M
3300015265	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300022508	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-19-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025321	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025909	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027552	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S AM (SPAdes)	Host-Associated	Open in IMG/M
3300027617	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 S AM (SPAdes)	Host-Associated	Open in IMG/M
3300027654	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027876	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes)	Host-Associated	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICCgaii200_04713343	2228664021	Soil	ATLHGSYAFXATGERFAAVARFVFDGNGHLTATFYGRNPGTPFGPVEFEGEYSVNPECIVTDTWGPPLNSSHTSVIYEQGRGYFILNSTPDDDPAADTVNSGEGIRQ
INPhiseqgaiiFebDRAFT_1017724121	3300000364	Soil	MSRKYWFVPLGVTVALAFAAIRSDAQVKQHCTNATLHGSYAFRATGERFAAVARFVFDGNGGLTATFFGRTPGNPFGPVEFEGTYSVSPECIVTDTWGPPLSSSHTAVIYEQGKGYFILNSSPDGDPAADTVNSGEAIRQ*
JGI1027J11758_129251541	3300000789	Soil	NKVVLGVTVALAFAIGSDAQVKQQCTNATLHGSYAFRATGERFAAVARFVFDGNGGLTATFFGRTPGNPFGPVEFEGTYSVSPECIVTDTWGPPLSSSHTAVIYEQGKGYFILNSSPDGDPAADTVNSGEAIRQ*
JGI11643J12802_113162142	3300000890	Soil	TCTNATLHGSYAFRATGERFAAVARFVFDGNGHLTATFYGRNPGTPFGPVEFEGEYSVNPECIVTDTWGPPLNSSHTSVIYEQGRGYFILNSTPDDDPAADTVNSGEGIRQ*
soilL1_101669851	3300003267	Sugarcane Root And Bulk Soil	MTRKHWFVAVGVAVALAVAIGSDAQVKHNCTNATLHGSYAFRATGERFAAVARFVFDGNGHLTATFYGRNPGMPFGPVEFEGEYSVGPDCIVTDTWGPPLNSSHTSVIYEQGRGYFILNSTPDGDPAADTVNSGEGIRQ*
soilH1_100652884	3300003321	Sugarcane Root And Bulk Soil	MSPRNSFVTTLALVVLGLTVTLNADNGGICSNETLHGSYAFHATGERFAAVARFTFDGKGGLTAILFRRLPASPLGPIQLTGTYSVDSNCIVTDEWGGSIHTSVIYGHGNGYFILDSSPDGDQTGDTVNSGEAIRQ*
soilH1_102910612	3300003321	Sugarcane Root And Bulk Soil	MCPRNLVLCLTLTLLILAIGMQAQDKANCSNATLHGSYGFHATGELFAAVARFDFDGQGGLKGTLFGRTPGHPFGPVDFSGTYSVSPDCIVTDSWLGSTHVSVIVDGGKGYFILDSTPDGSASADTVNSGEGRKQ*
Ga0062593_1001118921	3300004114	Soil	MSRKYWVLALGLTLALVFAIRSNAQVKQHCTDATLHGSYAFRATGERFAAVARFVFDGNGHLTATFFGRGPGNPFGPVEFEGTYSVSPECIVTDTFGDSIHTSVIYEQGRGYFILNSSPDGDPATDTVNSGEGIRQ*
Ga0062589_1002571491	3300004156	Soil	MSRKYWFVPLGVTVALAFAAIRSDAQVKQHCTNATLHGSYAFRATGERFAAVARFVFDGNGHLTATFFGRGPGNPFGPVEFEGEYSVSPECIVSDTWGGSNHTSVIYEQGKGYFILNSSPDGDPDADSVNSGEGIRQ*
Ga0062589_1007901622	3300004156	Soil	VIRKHWFVAVGVAVALAVAIGSDAQVKHTCTNATLHGSYAFRATGERFAAVARFVFDGNGHLTATFYGRNPGTPFGPVEFEGEYSVNPECIVTDTWGPPLNSSHTSVIYEQGRGYFILNSTPDDDPAADTVNSGEGIRQ*
Ga0062590_1006242882	3300004157	Soil	MSRPHRFVALVVGVTIALVFAMGSEAQVKQHCTNATLHGSYAFRATGERFAAVARFVFDGKGHLSATFFGRGPGNPFGPVEFEAEYSVSPECIVTDNFGGSTHTSVIYEQGRGYFILNSSPDGDPGADTVNSGEGIRQ*
Ga0063356_1017637871	3300004463	Arabidopsis Thaliana Rhizosphere	MLRKSWVLALGVTLALAFALRSNAQVKQHCTNATLHGSYAFRATGELFAAVARFVFDGNGHLTATFFGRSPGNPFGPVEFDGTYSVSPECIVTDTWGPPLNSSHTAVIYEQGKGYFILNSSPDDDPSADTVNSGEGIRQ*
Ga0062595_1006561611	3300004479	Soil	RGRSAPVIRKYWFVAVGVAVALAVAIGSDAQVKHTCTNATLHGSYAFRATGERFAAVARFVFDGNGHLTATFYGRNPGTPFGPVEFEGEYSVNPECIVTDTWGPPLNSSHTSVTYEQGRGYFILNSTPDDDPAADTVNSGEGIRQ*
Ga0062592_1004648853	3300004480	Soil	MSRKYWVLALGVTLALAFAIRSNAQVKQHCTNATLHGSYAFRATGELFAAVARFVFDGNGHLTATFFGRSPGNPFGPVEFDGTYSVSPECIVTDTWGPPLNSSHTAVIYEQGKGYFILNSSPDDDPSADTVNSGEGIRQ*
Ga0062592_1006188491	3300004480	Soil	MSRQHRFVALVVGVTMALVFAMGSEAQVKQNCTNATLHGSYAFRATGERFAAVARFVFDGNGHLRATFFGRGPGNPFGPVEFEAEYSVSPECIVTDNFGGSTHTSVIYEQGRGYFILNSSPDGDPGADTVNSGEGIRQ*
Ga0062594_1034156232	3300005093	Soil	YAFHATGERFAAVARFTFDGRGGLAATFFGRSPGNPFGPIEFTGTYSVSPDCIVTDEWLDGIHHSVIYGKGKGYFILNSSPDGDPTQDTVNSGEGRR*
Ga0065704_108052331	3300005289	Switchgrass Rhizosphere	MLRKYWFLALGVTVALAFAIGSDAQVKQQCTNATLHGSYAFRATGERFAAVARFVFDGNGHLTATFFGRTPGNPFGPVEFEGPYSVSPECIVTDTWGPPLNSSHTAVIYEQGKGYFILNS
Ga0065715_104801152	3300005293	Miscanthus Rhizosphere	MSNRNLVMWLILGVLSLPVAMRSEDSASCSNATLHGSYAFHATGERFAAVARFTFDGRGGLTATFFGRSPGNPFGPIEFTGTYSVSPDCIVTDEWLDSIHHSVVYGKGTGYFILNSSPDGDPTQDTVNSGEGRRQ*
Ga0065705_109643941	3300005294	Switchgrass Rhizosphere	MLRKYWFLALGVTVALAFAIGSDAQVKQQCTNATLHGSYAFRATGERFAAVARFVFDGNGHLTATFFGRTPGNPFGPVEFEGPYSVSPECIVTDTWGPPLNSSHTAVIYEQGKGYFILNSTPDDDPAADTVNSGEGIRQ*
Ga0065707_103539601	3300005295	Switchgrass Rhizosphere	VIRKHWFVAVGVAVALAVAIGSDAQVKHNCTNATLHGSYAFRATGERFAAVARFVFDGNGHLTATFYGRNPGTPFGPVEFEGEYSVNPECIVTDTWGPPLNSSHTSVIYEQGRGYFILNSTPD
Ga0066388_1018830591	3300005332	Tropical Forest Soil	MSSSLSITLRGQEKTNCSNATLQGSYAFHATGELFAAVARFTFDGQGGITGTFFGRSPGSPFGPIEFTGSYSVSPDCIVTDEWLGSIHTSVIYENGKGYFILNNSPGGDPGQDSVNSGEGRRQ*
Ga0066388_1027948051	3300005332	Tropical Forest Soil	MFPRNLFILVAILLLLNLGIGMQAEDRANCSNATLHGSHAFRATGERFAAVARFTFDGRGGFTAIFFGRTPVNPFGFEFSGTYSVDSNCIVTVEWADGSIHHSVIYGEGEGYFILNSTPSSAGEASYPERLARSSHN*
Ga0070680_1016456911	3300005336	Corn Rhizosphere	NEILHGSYAFHATGERFAAVARFTFDGKGGLTAILFRRLPASPLGPIQLTGTYSVDSNCIVTDEWGGSIHTSVIYGRGKGYFILDSSPDGDQTGDTVNSGEAIRQ*
Ga0068868_1010861352	3300005338	Miscanthus Rhizosphere	MSNRNLVMWLILGVLSLPVGMRSEDNASCSNATLHGNYAFHATGERFAAVARFTFDGRGGLTATFFGRSPGNPFGPIEFTGTYSVSPDCIVTDEWLDGIHHSVIYGKGKGYFILNSSPDGDPTQDTVNSGEGRR*
Ga0070660_1007102842	3300005339	Corn Rhizosphere	MFQKNFVIQLAILLLSLAISMQGENRATCSNATLHGSYAFRATGERFAAVARFTFNGRGGFTAIFFGRTPGNPFGFEFSGTYSVDSNCIVTDEWADGSIHHSVIYGNGKGYFILNSSPDGDPDQDSVNSGEGRRQ*
Ga0070692_103099612	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MSNRNLVMWLILGVLSLPVAMRSEDSASCSNATLHGSYAFHATGERFAAVARFTFDGRGGLTATFFGRSPGNPFGPIEFTGTYSVSPDCIVTDEWLDSIHHSVVYGKGRGYFILNSSPDGDPTQDTVNSGEGRRQ*
Ga0070668_1019343321	3300005347	Switchgrass Rhizosphere	LVMWLILGVLSLPVAMRSEDSASCSNATLHGSYAFHATGERFAAVARFTFDGRGGLTATFFGRSPGNPFGPIEFTGTYSVSPDCIVTDEWLDSIHHSVVYGKGTGYFILNSSPDGDPTQDTVNSGEGRRQ*
Ga0070671_1010726232	3300005355	Switchgrass Rhizosphere	MSNRNLVMWLILGVLSLPVAMRSEDSASCSNATLHGSYAFHATGERFAAVARFTFDGRGGLTATFFGRSPGNPFGPIEFTGTYSVSPDCIVTDEWLDGIHHSVIYGKGKGYFILNSSPDGDPTQDTVNSGEGRRQ*
Ga0070659_1000259393	3300005366	Corn Rhizosphere	MSNRSLVMWLILGVLSLPVGMRSEDNASCSNATLHGNYAFHATGERFAAVARFTFDGRGGLAATFFGRSPGNPFGPIEFTGTYSVSPDCIVTDEWLDGIHHSVIYGKGKGYFILNSSPDGDPTQDTVNSGEGRRQ*
Ga0070663_1011788792	3300005455	Corn Rhizosphere	MSNRNPVMWLILGVLSFSVGMRSEDSASCSNATLHGSYAFHATGERFAAVARFTFDGRGGLTATFFGRSPGNPFGPIEFTGTYSVSPDCIVTDEWLDSIHHSVVYGKGTGYFILNSSPDGDPTQDTVNSGEGRRQ*
Ga0070681_117271501	3300005458	Corn Rhizosphere	MSNRSLVMWLILGVLSLPVGMRSEDNASCSNATLHGNYAFHATGERFAAVARFTFDGRGGLTATFFGRSPGNPFGPIEFTGTYSVSPDCIVTDEWLDSIHHSVVYGKGTGYFILNSSPDGDPTQDTVNSGEGRRQ*
Ga0070699_1016335981	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	VTLNADNGGICSNEILHGSYAFHATGERFAAVARFTFDGKGGLTAILFRRLPASPLGPIQLTGTYSVDSNCIVTDEWGGSIHTSVIYGRGKGYFILDSSPDGDQTGDTVNSGEAIRQ*
Ga0068853_1024833781	3300005539	Corn Rhizosphere	MSNRSLVMWLILGVLSLPVGMRSEDNASCSNATLHGNYAFHATGERFAAVARFTFDGRGGLTATFFGRSPGNPFGPIEFTGTYSVSPDCIVTDEWLDSIHHSVVYGNGKGYFILN
Ga0070696_1006420562	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MSNRSLVMWLILGVLSLPVGMRSEDNASCSNATLHGSYAFHATGERFAAVARFTFDGRGGLTATFFGRSPGNPFGPIEFTGTYSVSPDCIVTDEWLDSIHHSVVYGKGTGYFILNSSPDGDPTQDTVNSGEGRR*
Ga0068855_1022702291	3300005563	Corn Rhizosphere	SYAFRATGERFAAVARFTFDGRGGFTAIFFGRTPGNPFGFEFSGTYSVDSNCIVTDEWADGSIHHSVIYGNGKGYFILNSSPDGDPDQDSVNSGEGRRQ*
Ga0070664_1002351312	3300005564	Corn Rhizosphere	MSNRNLVMWLILGVLSLPVAMRSEDSASCSNATLHGSYAFHATGERFAAVARFTFDGRGGLAATFFGRSPGNPFGPIEFTGTYSVSPDCIVTDEWLDGIHHSVIYGKGKGYFILNSSPDGDPTQDTVNSGEGRRQ*
Ga0068854_1003208862	3300005578	Corn Rhizosphere	MSNRSLVMWLILGVLSLPVGMRSEDNASCSNATLHGSYAFHATGERFAAVARFTFDGRGGLTATFFGRSPGNPFGPIEFTGTYSVSPDCIVTDEWLDSIHHSVVYGKGKGYFILNSSPDGDPTQDTVNSGEGRRQ*
Ga0068856_1004894122	3300005614	Corn Rhizosphere	AMRSEDSASCSNATLHGSYAFHATGERFAAVARFTFDGRGGLTATFFGRSPGNPFGPIEFTGTYSVSPDCIVTDEWLDSIHHSVVYGKGTGYFILNSSPDGDPTQDTVNSGEGRRQ*
Ga0068852_1003645722	3300005616	Corn Rhizosphere	MSNRNLVMWLILGVLSLPVAMRSEDSASCSNATLHGSYAFHATGERFAAVARFTFDGRGGLTATFFGRSPGNPFGPIEFTGTYSVSPDCIVTDEWLDGIHHSVIYGKGKGYFILNSSPDGDPTQDTVNSGEGRR*
Ga0068851_106409471	3300005834	Corn Rhizosphere	QGEKTMSNRSLVMWLILGVLSLPVGMRSEDNASCSNATLHGNYAFHATGERFAAVARFTFDGRGGLTATFFGRSPGNPFGPIEFTGTYSVSPDCIVTDEWLDSIHHSVVYGKGTGYFILNSSPDGDPTQDTVNSGEGRRQ*
Ga0068871_1012948702	3300006358	Miscanthus Rhizosphere	MSNRSLVMWLILGVLSLPVGMRSEDNASCSNATLHGNYAFHATGERFAAVARFTFDGRGGLAATFFGRSPGNPFGPIEFTGTYSVSPDCIVTDEWLDSIHHSVVYGKGTGYFILNSSPDGDPTQDTVNSGEGRR*
Ga0079222_117221461	3300006755	Agricultural Soil	KKFVTALSLVVLGLSVIGNADDGGICSNETLHGSYAFHATGERFAAVARFTFDGNGGLTAIFFGRSPGNPFGPVELTGTYSVDSNCIVTDEWGGSIHTSVIYGHGKGYFILNSSPEDNPDTDTVNSGEAIRQ*
Ga0079221_100192275	3300006804	Agricultural Soil	MSPPKKFVTALSLVVLGLSVIGNADDGGICSNETLHGSYAFHATGERFAAVARFTFDGNGGLTAIFFGRSPGNPFGPVELTGTYSVDSNCIVTDEWGGSIHTSVIYGHGKGYFILNSSPEDNPDTDTVNSGEAIRQ*
Ga0079220_106399102	3300006806	Agricultural Soil	MSPPKKFVTALSLVVLGLSVIGNADDGGICSNETLHGSYAFHATGERFAAVARFTFDGNGGLTAIFFGRSPGNPFGPVELTGTYSVDWIYGHGKGYFILNSSPEDNPDTDTVNS
Ga0075433_100169092	3300006852	Populus Rhizosphere	MSHKNSILWLMLVVLCLAIGMNADDKAGCSNATLHGSYAFHATGERFAAVARFVFDGKGGLTGTLFGRSPGNPFGPVEFSGTYSVSPDCIVTDNWLGGPHTSVIYGHGRGYFILNTSPDGDPAEDSVNSGEAIRQ*
Ga0075436_1013281411	3300006914	Populus Rhizosphere	MSLRNRIVTMLTLVMLGLTIPLNAENGGVCSNETLHGSYAFHATGELFAAVARFTFDGKGGLTAILFRRLPASPLGPIQLTGTYSVDSNCIVTDEWGGSIHTSVIYGHGNGYFILDSSPDGDQTGDTVNSGEAIRQ*
Ga0105240_105847372	3300009093	Corn Rhizosphere	MWLILGVLSLPVGMRSEDNASCSNATLHGNYAFHATGERFAAVARFTFDGRGGLTATFFGRSPGNPFGPIEFTGTYSVSPDCIVTDEWLDSIHHSVVYGKGTGYFILNSSPDGDPTQDTVNSGEGRRQ*
Ga0075423_100286897	3300009162	Populus Rhizosphere	MLVVLCLAIGMNADDKAGCSNATLHGSYAFHATGERFAAVARFVFDGKGGLTGTLFGRSPGNPFGPVEFSGTYSVSPDCIVTDNWLGGPHTSVIYGHGRGYFILNTSPDGDPAEDSVNRGEAIRQ*
Ga0105241_103244422	3300009174	Corn Rhizosphere	MRSEDNASCSNATLHGNYAFHATGERFAAVARFTFDGTGGLTATFFGRSPGNPFGPIEFTGTYSVSPDCIVTDEWLDGIHHSVIYGKGKGYFILNSSPDGDPTQDTVN
Ga0105241_111447271	3300009174	Corn Rhizosphere	NATLHGSYAFHATGERFAAVARFTFDGRGGLTATFFGRSPGNPFGPIEFTGTYSVSPDCIVTDEWLDSIHHSVVYGKGTGYFILNSSPDGDPTQDTVNSGEGRRQ*
Ga0105248_104602902	3300009177	Switchgrass Rhizosphere	MWLILGVLSFSVGMRSEDSASCSNATLHGSYAFHATGERFAAVARFTFDGRGGLTATFFGRSPGNPFGPIEFTGTYSVSPDCIVTDEWLDSIHHSVVYGKGTGYFILNSSPDGDPTQDTVNSGEGRRQ*
Ga0105237_101544283	3300009545	Corn Rhizosphere	MWLILGVLSLPVGMRSEDNASCSNATLHGNYAFHATGERFAAVARFTFDGRGGLAATFFGRSPGNPFGPIEFTGTYSVSPDCIVTDEWLDSIHHSVVYGKGTGYFILNSSPDGDPTQDTVNSGEGRRQ*
Ga0105238_101269763	3300009551	Corn Rhizosphere	MWLILGVLSLPVGMRSEDNASCSNATLHGNYAFHATGERFAAVARFTFDGRGGLAATFFGRSPGNPFGPIEFTGTYSVSPDCIVTDEWLDGIHHSVIYGKGKGYFILNSSPDGDPTQDTVNSGEGRRQ*
Ga0126384_100069021	3300010046	Tropical Forest Soil	MSSSLSITLRGQEKTNCSNTTLHGSYAFHATGELFAAVARFAFDGQGGITGTFFGRSPGSPFGRIEFTGSYSVSPDCIVTDEWLGSIHTSVIYENGKEYFILNSSRGGDPGQDSVNSGEDRRQ*
Ga0126382_109511521	3300010047	Tropical Forest Soil	MSSSLSITLRGQEKTNCSNTTLHGSYAFHATGELFAAVARFAFDGQGGITGTFFGRSPGSPFGRIEFTGSYSVSPDCIVTDEWLGSIHTSVIYENGKGYFILNRSPGGDPGQDSVNSGEGRRH*
Ga0134128_102125483	3300010373	Terrestrial Soil	MSPRNSFVTTLALVVLGLTVTLNADNGGICSNEILHGSYAFHATGERFAAVARFTFDGKGGLTAILFRRLPASPLGPIQLTGTYSVDSNCIVTDEWGGSIHTSVIYGRGKGYFILDSSPDGDQTGDTVNSGEAIRQ*
Ga0134128_105085112	3300010373	Terrestrial Soil	MWLILGVLSLPVGMRSEDNASCSNATLHGSYAFHATGERFAAVARFTFDGRGGLAATFFGRSPGNPFGPIEFTGTYSVSPDCIVTDEWLDSIHHSVVYGKGTGYFILNSSPDGDPTQDTVNSGEGRRQ*
Ga0134128_129615481	3300010373	Terrestrial Soil	MSLRNRIVTMLALVMLGLTIPVNAENGGVCSNETLHGSYAFHATGELFAAVARFTFDGKGGLTAIFFGRSPGNPFGPVPLTGTYSVDSNCIVTDEWGGSIHTSVIYGHGKGYFIINSSTDVPASADTVNSGEAIRQ*
Ga0105239_102912692	3300010375	Corn Rhizosphere	MWLILGVLSLPVAMRSEDSASCSNATLHGSYAFHATGERFAAVARFTFDGRGGLTATFFGRSPGNPFGPIEFTGTYSVSPDCIVTDEWLDSIHHSVVYGKGTGYFILNSSPDGDPTQDTVNSGEGRRQ*
Ga0126381_1003467763	3300010376	Tropical Forest Soil	MCQRNLVLWLTLILLSFAIGMQAEDKATCSNATLHGSYAFHATGELFAAVTRFTFDGNGGFKAIFFGRTPGNPFGFEFSGTYSVDSNCIVTDQWADGSIHHSVIYGEGEGYFILNSSPSSAEGDTVNSGEARRQ*
Ga0134124_102008742	3300010397	Terrestrial Soil	MRSEDSASCSNATLHGNYAFHATGERFAAVARFTFDGRGGLAATFFGRSPGNPFGPIEFTGTYSVSPDCIVTDEWLDGIHHSVIYGKGKGYFILNSSPDGDPTQDTVNSGEGRRQ*
Ga0126383_103981391	3300010398	Tropical Forest Soil	MCQRNLVLWLTLILLSFAIGMQAEDKATCSNATLHGSYAFHATGELFAAVTRFTFDGNGGFKAIFFGRTPGNPFGFEFSGTYSVDSNCIVTDQWADGSIHHSVIYGEGEGYFILNSSPSSAEGDTVNSGEARKQ*
Ga0134122_105942502	3300010400	Terrestrial Soil	DSASCSNATLHGSYAFHATGERFAAVARFTFDGRGGLTATFFGRSPGNPFGPIEFTGTYSVSPDCIVTDEWLDSIHHSVVYGKGTGYFILNSSPDGDPTQDTVNSGEGRRQ*
Ga0134122_126114561	3300010400	Terrestrial Soil	MLRKYWFLAFSVTIALAFAVGSHAQVKQHCTDATLHGSYAFRATGERFAAVARFVFDGNGHLTATFFGRGPGNPFGPVEFEGEYSVSPECIVSDTWGGSNHTSVIYEQGKGYFILNSSPDGDPATDTVNSGEGIRQ*
Ga0137391_113595451	3300011270	Vadose Zone Soil	VYHQSERRLNMSTRNPVLWLSLVVLSLAIGIRAEDKEDKANCSNATLRGSYGFHATGHVFAAVARFTFDGKGGLTGTLYGRTPGNPFGPVEFSGTYSVSPDCIVTDTWLDSTHVSVIVDGGKGYFILNTTPSSADEDTVNSGEARRQ*
Ga0137365_111064461	3300012201	Vadose Zone Soil	MSRRNLVLWLTLVVLSLVVGMHAEDRANCSNATLHGSYGFHATGQLFAAVARFTFDGKGGLTGTFFGRTPGNPFGPIEFTGTYSVSPDCIVTDTWLDSTHVSVIVDEGKGYFILNTTPSTADEDTVNSGEARRQ*
Ga0137379_108680661	3300012209	Vadose Zone Soil	YHLPEGESNMSRRNLVLWLTLVVLSLVVGMHAEDRANCSNATLHGSYGFHATGQLFAAVARFTFDGKGGLTGTFFGRTPGNPFGPIEFTGTYSVSPDCIVTDTWLDSTHVSVIVDEGKGYFILNTTPSTADEDTVNSGEARRQ*
Ga0164305_105743231	3300012989	Soil	ATGEEFAAVARFVFDGNGHLSATFFGRSPGSPFGPVHFEGEYSVSPQCIVTDTWGDSIHTSVIYEQGRGYFILNSTPDGDPAADSVNSGEGIRQ*
Ga0157371_104529691	3300013102	Corn Rhizosphere	MWLILGVLSLPVAMRSEDSASCSSATLHGSYAFHATGERFAAVARFTFDGRGGLTATFFGRSPGNPFGPIEFTGTYSVSPDCIVTDEWLDSIHHSVVYGKGTGYFILNSSPDGDPTQDTVNSGEGRRQ*
Ga0157369_103666823	3300013105	Corn Rhizosphere	MWLILGVLSLPVAMRSEDSASCSNATLHGNYAFHATGERFAAVARFTFDGRGGLAATFFGRSPGNPFGPIEFTGTYSVSPDCIVTDEWLDSIHHSVVYGKGTGYFILNSSPDGDPTQDTVNSGEGRRQ*
Ga0157374_100474662	3300013296	Miscanthus Rhizosphere	MWLILGVLSLPVAMRSEDSASCSNATLHGSYAFHATGERFAAVARFTFDGRGGLTATFFGRSPGNPFGPIEFTGTYSVSPDCIVTDEWLDSIHHSVVYGKGKGYFILNSSPDGDPTQDTVNSGEGRRQ*
Ga0157378_113234531	3300013297	Miscanthus Rhizosphere	FAVGSHAQVKQHCTDATLHGSYAFRATGERFAAVARFVFDGNGHLTATFFGRGPGNPFGPVELEGSYSVSPECIVTDTWGDSVHTSVIYEQGRGYFILNSSPDGDPATDTVNSGEGIRQ*
Ga0157372_109159041	3300013307	Corn Rhizosphere	IFSPLSNPELQGEKTMSNRNIVMWLIVGVLSLPVGMRSEENASCSNATLHGSYAFHATGERFAAVARFTFDGRGGLTATFFGRSPGNPFGPIEFTGTYSVSPDCIVTDEWLDSIHHSVVYGKGTGYFILNSSPDGDPTQDTVNSGEGRRQ*
Ga0157372_125612161	3300013307	Corn Rhizosphere	QGENRATCSNATLHGSYAFRATGERFAAVARFTFDGRGGFTAIFFGRTPGNPFGFEFSGTYSVDSNCIVTDEWADGSIHHSVIYGNGKGYFILNSSPDGDPDQDSVNSGEGRRQ*
Ga0182008_102142941	3300014497	Rhizosphere	DLELQGEKTMSNRNPVMWLILGVLSFSVGMRSEDSASCSNATLHGSYAFHATGERFAAVARFTFDGRGGLTATFFGRSPGNPFGPIEFTGTYSVSPDCIVTDEWLDGIHHSVIYGKGKGYFILNSSPDGDPTQDTVNSGEGRR*
Ga0173483_107878721	3300015077	Soil	PSEARRGRSAPVIRKHWFVAVGVAVALAVAIGSDAQVKHTCTNATLHGSYAFRATGERFAAVARFVFDGNGHLTATFFGRGPGNPFGPVEFEGEYSVSPECIVSDTWGGSNHTSVIYEQGKGYFILNSSPDGDPDADSVNSGEGIRQ*
Ga0182007_100207151	3300015262	Rhizosphere	MWLILGVLSLPVAMRSEDSASCSNATLHGSYAFHATGERFAAVARFTFDGRGGLAATFFGRSPGNPFGPIEFTGTYSVSPDCIVTDEWLDSIHHSVVYGKGTGYFILNSSPDGDPTQDTVNSGEGRRQ*
Ga0182005_10584791	3300015265	Rhizosphere	MRSEDSASCSNATLHGSYAFHATGERFAAVARFTFDGRGGLTATFFGRSPGNPFGPIEFTGTYSVSPDCIVTDEWLDSIHHSVVYGKGTGYFILNSSPDGDPTQDTVNSGEGRRQ*
Ga0132258_100299731	3300015371	Arabidopsis Rhizosphere	MMIRKHWFIAVGVTVALAFAIHSEAQVKQQCTNATLHGSYAFRATGEEFAAVARFVFDGNGHLSATFFGRSPGSPFGPVHFEGEYSVSPQCIVTDTWGDSIHTSVIYEQGRGYFILNSTPDGDPAADSVNSGEGIRQ*
Ga0132258_1006326810	3300015371	Arabidopsis Rhizosphere	MSRKYWVLALGVTIALAFAIRTNAQVKQHCTDATLHGSYAFRATGERFAAVARFVFDGNGHLTATFFGRSPGNPFGPVEFDGTYSVSPECIVTDTFGGSTHTSVIYEQGRGYFILNSSPDGDPATDTVNSGEGIRQ*
Ga0132258_102011893	3300015371	Arabidopsis Rhizosphere	MSHKNSILWLTLVVLCLAIGINADDKAGCSNATLHGSYAFHATGERFAAVARFVFDGKGGLTGTLFGRSPGNPFGPVEFSGTYSVSPDCIVTDNWLGGPHTSVIYGHGRGYFILNTSPDGDPAEDSVNSGEAIRQ*
Ga0132258_102711647	3300015371	Arabidopsis Rhizosphere	MSRKSWVLALGVTLALAFAIRSNAQVKQHCTNATLHGSYAFRATGELFAAVARFVFDGNGHLTATFFGRSPGNPFGPVEFDGTYSVSPECIVTDTWGPPLNSSHTAVIYEQGKGYFILNSSSDDDPSADTVNSGEGIRQ*
Ga0132258_108188243	3300015371	Arabidopsis Rhizosphere	MMIRKHLFIAVGVTVALAFAIHSDAQVKQQCTNATLHGSYAFRATGEEFAAVARFVFDGNGHLSATFFGRSPGSPFGPVQFEGEYSVSPQCIVTDMWGNSSHTSVIYEQGRGYFILNSTPDGDPAADTVNSGEGIRQ*
Ga0132256_1003691501	3300015372	Arabidopsis Rhizosphere	MLVVLCLAIGMNADDKAGCSNATLHGSYAFHATGERFAAVARFVFDGKGGLTGTLFGRSPGNPFGPVEFSGTYSVSPDCIVTDNWLGGPHTSVIYGHGRGYFILNTSPDGDPAEDSVNSGEAIRQ*
Ga0132256_1004451781	3300015372	Arabidopsis Rhizosphere	MMIRKHLFIAVGVTVALAFAIHSDAQVKQQCTNATLHGSYAFRATGEEFAAVARFVFDGNGHLSATFFGRSPGSPFGPVHFEGEYSVSPQCIVTDTWGDSIHTSVIYEQGRGYFILNSTPDGDPAADSVNSGEGIRQ*
Ga0132256_1038029941	3300015372	Arabidopsis Rhizosphere	WFVPLGVTVALAFASIRSDAQVKQHCTNATLHGSYAFRATGERFAAVARFVFDGNGHLTATFFGRGPGNPFGPVEFEGEYSVSPECIVSDTWGGSNHTSVIYEQGKGYFILNSSPDGDPDADSVNSGEGIRQ*
Ga0132255_1002155851	3300015374	Arabidopsis Rhizosphere	MLVVLCLAIGMNADDKAGCSNATLHGSYAFHATGERFAAVARFVFDGKGGLTGTLFGRSPGNPFGPVEFSGTYSVSPDCIVTDNWLGGPHTSVIYGQGRGYFILNTSPDGDPVEDSVNSGEAIRQ*
Ga0173481_107552781	3300019356	Soil	VIRKHWFVAVGVAVALAVAIGSDAQVKHTCTNATLHGSYAFRATGERFAAVARFVFDGNGHLTATFYGRNPGTPFGPVEFEGEYSVNPECIVTDTWGPPLNSSHTSVIYEQGRGYFILNSTPDDDPAADTVNSGEG
Ga0173482_103143521	3300019361	Soil	MSRQHRFVALVVGVTMALVFAMGSEAQVKQNCTNATLHGSYAFRATGERFAAVARFVFDGNGHLRATFFGRGPGNPFGPVEFEAEYSVSPECIVTDNFGGSTHTSVIYEQGRGYFILNSSPDGDPGADTVNSGEGI
Ga0210407_100019568	3300020579	Soil	MSHRKLVLWLTLVVLSFAIGVHAEDRANCSNATLHGSYGFRATGELFAAVARFTFDGKGGFTATFFGRTPGNPFGPVQFTGTYSVSQDCIVTDSWGPPLNSTHVSVIVDGGKGYFILNSTPSSADGDTVNSGEARRQ
Ga0210399_110465701	3300020581	Soil	MSKKKLVLSLMLVVLSLAIAMQAEDKANCSNATLHGSYAFHATGERFAAVARFVFDGKGGLTGTLFGRSPGNPFGPIEFAGTYSVSPDCIVTDTWLGGPHTSVIYGQGRGYFILNTSPDGDPTEDSVNS
Ga0210406_101485003	3300021168	Soil	MSKKKLVLSLMLVVLSLAIAMQAEDKANCSNATLHGSYAFHATGERFAAVARFVFDGKGGLTGTLFGRSPGNPFGPIEFAGTYSVSPDCIVTDTWLGGPHTSVIYGQGRGYFILNTSPDGDPTEDSVNSGEAIRQ
Ga0182009_101024074	3300021445	Soil	MSNRSLVMWLILGVLSLPVGMRSEDNASCSNATLHGNYAFHATGERFAAVARFTFDGRGGLTATFFGRSPGNPFGPIEFTGTYSVSPDCIVTDEWLDSIHHSVVYGKGTGYFILNSSPDGDPTQDTVNSGEGRR
Ga0210402_114526921	3300021478	Soil	MSKKKLVLSLMLVVLSLAIAMQAEDKANCSNATLHGSYAFHATGERFAAVARFVFDGKGGLTGTLFGRSPGNPFGPIEFAGTYSVSPDCIVTDTWLGGPHTSVIYGQGRG
Ga0222728_11056981	3300022508	Soil	MSHRKLVLWLTLVVLSFAIGVHAEDRANCSNATLHSSYGFRATGELFASVARFTFDGKGGFTATFFGRTPGNPFGPVQFTGTYSVSQDCIVTDSWGPPLNSTHVSVIVDGGKGYFILNSTPSSADGDTVNSGE
Ga0207656_105672231	3300025321	Corn Rhizosphere	EKTMSNRSLVMWLILGVLSLPVGMRSEDNASCSNATLHGNYAFHATGERFAAVARFTFDGRGGLAATFFGRSPGNPFGPIEFTGTYSVSPDCIVTDEWLDSIHHSVVYGKGTGYFILNSSPDGDPTQDTVNSGEGRRQ
Ga0207705_104125761	3300025909	Corn Rhizosphere	PVAMRSEDSASCSNATLHGSYAFHATGERFAAVARFTFDGRGGLTATFFGRSPGNPFGPIEFTGTYSVSPDCIVTDEWLDSIHHSVVYGKGTGYFILNSSPDGDPTQDTVNSGEGRRQ
Ga0207695_108724472	3300025913	Corn Rhizosphere	MSNRSLVMWLILGVLSLPVAMRSEDSASCSNATLHGSYAFHATGERFAAVARFTFDGRGGLTATFFGRSPGNPFGPIEFTGTYSVSPDCIVTDEWLDSIHHSVVYGKGTGYFILNSSPDGDPTQDTVNSGEGRRQ
Ga0207671_100832323	3300025914	Corn Rhizosphere	MSNRNLVMWLILGVLSLPVAMRSEDSASCSNATLHGSYAFHATGERFAAVARFTFDGRGGLTATFFGRSPGNPFGPIEFTGTYSVSPDCIVTDEWLDSIHHSVVYGKGTGYFILNSSPDGDPTQDTVNSGEGRRQ
Ga0207657_106026771	3300025919	Corn Rhizosphere	MSNRSLVMWLILGVLSLPVGMRSEDNASCSNATLHGNYAFHATGERFAAVARFTFDGRGGLAATFFGRSPGNPFGPIEFTGTYSVSPDCIVTDEWLDGIHHSVIYGKGKGYFILNSSPDGDPTQDTVNSGEGRR
Ga0207659_112908451	3300025926	Miscanthus Rhizosphere	MSNRNLVMWLILGVLSLPLAMRSEDSASCSNATLHGNYAFHATGERFAAVARFTFDGRGGLAATFFGRSPGNPFGPIEFTGTYSVSPDCIVTDEWLDSIHHSVVYGKGTGYFILNSSPDGDPTQDTVNSGEGRRQ
Ga0207644_107363401	3300025931	Switchgrass Rhizosphere	MSNRNLVMWLILGVLSLPVAMRSEDSASCSNATLHGSYAFHATGERFAAVARFTFDGRGGLTATFFGRSPGNPFGPIEFTGTYSVSPDCIVTDEWLDGIHHSVIYGKGKGYFILNSSPDGDPTQDTVNSGEGRRQ
Ga0207706_101418932	3300025933	Corn Rhizosphere	MSNRSLVMWLILGVLSLPVGMRSEDNASCSNATLHGSYAFHATGERFAAVARFTFDGRGGLTATFFGRSPGNPFGPIEFTGTYSVSPDCIVTDEWLDGIHHSVIYGKGKGYFILNSSPDGDPTQDTVNSGEGRR
Ga0207711_119629141	3300025941	Switchgrass Rhizosphere	LELQGEKTMSNRNLVMWLILGVLSLPVAMRSEDSASCSNATLHGSYAFHATGERFAAVARFTFDGRGGLTATFFGRSPGNPFGPIEFTGTYSVSPDCIVTDEWLDSIHHSVVYGKGTGYFILNSSPDGDPTQDTVNSGEGRRQ
Ga0207679_103207612	3300025945	Corn Rhizosphere	MSNRNLVMWLILGVLSLPVAMRSEDSASCSNATLHGSYAFHATGERFAAVARFTFDGRGGLAATFFGRSPGNPFGPIEFTGTYSVSPDCIVTDEWLDGIHHSVIYGKGKGYFILNSSPDGDPTQDTVNSGEGRRQ
Ga0207667_116967141	3300025949	Corn Rhizosphere	FQKNFVIQLAILLLSLAISMQGENRATCSNATLHGSYAFRATGERFAAVARFTFDGRGGFTAIFFGRTPGNPFGFEFSGTYSVDSNCIVTDEWADGSIHHSVIYGNGKGYFILNSSPDGDPDQDSVNSGEGRRQ
Ga0207668_118406212	3300025972	Switchgrass Rhizosphere	SLPVAMRSEDSASCSNATLHGSYAFHATGERFAAVARFTFDGRGGLTATFFGRSPGNPFGPIEFTGTYSVSPDCIVTDEWLDSIHHSVVYGKGTGYFILNSSPDGDPTQDTVNSGEGRRQ
Ga0207677_119181311	3300026023	Miscanthus Rhizosphere	AMRSEDSASCSNATLHGSYAFHATGERFAAVARFTFDGRGGLTATFFGRSPGNPFGPIEFTGTYSVSPDCIVTDEWLDSIHHSVVYGKGTGYFILNSSPDGDPTQDTVNSGEGRRQ
Ga0207639_122273791	3300026041	Corn Rhizosphere	MSNRSLVMWLILGVLSLPVGMRSEDNASCSNATLHGNYAFHATGERFAAVARFTFDGRGGLTATFFGRSPGNPFGPIEFTGTYSVSPDCIVTDEWLDSIHHSVVYGNGKGYFILNSSPDGDPTQDTVNSGEGRRQ
Ga0207702_107914752	3300026078	Corn Rhizosphere	MSNRNLVMWLILGVLSLPVAMRSEDSASCSNATLHGSYAFHATGERFAAVARFTFDGRGGLTATFFGRSPGNPFGPIEFTGTYSVSPDCIVTDEWLDSIHHSVVYGKGTGYFILNSSPDGDPTQDT
Ga0207675_1018894951	3300026118	Switchgrass Rhizosphere	MSNRNLVMWLILGVQSLPVAMRSEDSASCSNATLHGSYAFHATGERFAAVARFTFDGRGGLAATFFGRSPGNPFGPIEFTGTYSVSPDCIVTDEWLDGIHHSVIYGKGKG
Ga0207698_107857242	3300026142	Corn Rhizosphere	MSNRNLVMWLILGVLSLPVAMRSEDSASCSNATLHGSYAFHATGERFAAVARFTFDGRGGLTATFFGRSPGNPFGPIEFTGTYSVSPDCIVTDEWLDGIHHSVIYGKGKGYFILNSSPDGDPTQDTVNSGEGRR
Ga0209982_10633751	3300027552	Arabidopsis Thaliana Rhizosphere	VIRKHWFVAVGVAVALAVAIGSDAQVKHTCTNATLHGSYAFRATGERFAAVARFVFDGNGHLTATFYGRNPGTPFGPVEFEGEYSVNPECIVTDTWGPPLNSSHTSVIYEQGRGYFILNSTPDDDPAAD
Ga0210002_10381831	3300027617	Arabidopsis Thaliana Rhizosphere	VTRKHWFVAVGVAVALAVAIGSDAQVKHTCTNATLHGSYAFRATGERFAAVARFVFDGNGHLTATFYGRNPGTPFGPVEFEGEYSVNPECIVTDTWGPPLNSSHTSVIYEQGRGYFILNSTPDDDPAADTVNSGEGIRQ
Ga0209799_10008605	3300027654	Tropical Forest Soil	MSSSLSITLRGQEKTNCSNTTLHGSYAFHATGELFAAVARFTFDGQGGITGTFFGRSPGSPFGRIEFTGSYSVSPDCIVTDEWLGSIHTSVIYENGKEYFILNSSRGGDPGQDSVNSGEDRRQ
Ga0209701_101072041	3300027862	Vadose Zone Soil	SNATLRGSYGFHATGHVFAAVARFTFDGKGGLTGTLYGRTPGNPFGPVEFTGTYSVSPDCIVTDTWLDSTHVSVIVDGGKGYFILNTTPSSADEDTVNSGEARRQ
Ga0209974_100807891	3300027876	Arabidopsis Thaliana Rhizosphere	VIRKYWFVAVGVAVALAVAIGSDAQVKHTCTNATLHGSYAFRATGERFAAVARFVFDGNGHLTATFYGRNPGTPFGPVEFEGEYSVNPECIVTDTWGPPLNSSHTSVIYEQGRGYF
Ga0310813_118699311	3300031716	Soil	MSNRNPVMWLILGVLSFSVGMRSEDSASCSNATLHGSYAFHATGERFAAVARFTFDGRGGLTATFFGRSPGNPFGPIEFTGTYSVSPDCIVTDEWLDSIHHSVVYGKGKGYFILNSSPDGDPTQDTVNSGEGRRQ
Ga0307479_101878873	3300031962	Hardwood Forest Soil	LFCVATETVAQAQPTCSNATLHGSYGFRATGKDFAAVARFTFDGKGGLTGKLFGRVPGTNIGPLEFTGTYSVSPDCIVTDNWLDSTHVSVIVDQGDGYFILNVSEGPDGVNSGEARRQFPKNED
Ga0307471_1005251791	3300032180	Hardwood Forest Soil	MSHRKLVLWLTPVVLSFAIGMHAEDRANCSNATLHGSYGFRATGELFAAVARFTFDGKGGLTATFFGRTPGNPFGPVQFTGTYSVSQDCIVTDSWGPPLNSTHVSVIVDGGKGYFILNSTPS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F073615

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences