NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F073602

Metagenome Family F073602

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F073602
Family Type Metagenome
Number of Sequences 120
Average Sequence Length 60 residues
Representative Sequence GEKLLQDEFKDFRQTGSRKADELQGLFENLFSLENQILNTFVARDREAERYIFTD
Number of Associated Samples 111
Number of Associated Scaffolds 120

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 99.17 %
% of genes from short scaffolds (< 2000 bps) 88.33 %
Associated GOLD sequencing projects 104
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (99.167 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil
(9.167 % of family members)
Environment Ontology (ENVO) Unclassified
(34.167 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(46.667 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 74.55%    β-sheet: 0.00%    Coil/Unstructured: 25.45%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 120 Family Scaffolds
PF13485Peptidase_MA_2 14.17
PF07676PD40 4.17
PF00797Acetyltransf_2 1.67
PF07690MFS_1 0.83
PF01229Glyco_hydro_39 0.83
PF12706Lactamase_B_2 0.83

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 120 Family Scaffolds
COG2162Arylamine N-acetyltransferaseSecondary metabolites biosynthesis, transport and catabolism [Q] 1.67
COG3664Beta-xylosidaseCarbohydrate transport and metabolism [G] 0.83

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms99.17 %
UnclassifiedrootN/A0.83 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000364|INPhiseqgaiiFebDRAFT_105816892All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1040Open in IMG/M
3300000651|AP72_2010_repI_A10DRAFT_1012764All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1090Open in IMG/M
3300004114|Ga0062593_102526860All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia → Thermoanaerobaculales → Thermoanaerobaculaceae → Thermoanaerobaculum → Thermoanaerobaculum aquaticum582Open in IMG/M
3300004157|Ga0062590_102096734All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia → Thermoanaerobaculales → Thermoanaerobaculaceae → Thermoanaerobaculum → Thermoanaerobaculum aquaticum589Open in IMG/M
3300004479|Ga0062595_100559512All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia → Thermoanaerobaculales → Thermoanaerobaculaceae → Thermoanaerobaculum → Thermoanaerobaculum aquaticum878Open in IMG/M
3300004480|Ga0062592_100299542All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia → Thermoanaerobaculales → Thermoanaerobaculaceae → Thermoanaerobaculum → Thermoanaerobaculum aquaticum1216Open in IMG/M
3300004633|Ga0066395_10165092All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia → Thermoanaerobaculales → Thermoanaerobaculaceae → Thermoanaerobaculum → Thermoanaerobaculum aquaticum1134Open in IMG/M
3300005172|Ga0066683_10900792All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia → Thermoanaerobaculales → Thermoanaerobaculaceae → Thermoanaerobaculum → Thermoanaerobaculum aquaticum507Open in IMG/M
3300005331|Ga0070670_100273096All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia → Thermoanaerobaculales → Thermoanaerobaculaceae → Thermoanaerobaculum → Thermoanaerobaculum aquaticum1475Open in IMG/M
3300005334|Ga0068869_100526545All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia → Thermoanaerobaculales → Thermoanaerobaculaceae → Thermoanaerobaculum → Thermoanaerobaculum aquaticum990Open in IMG/M
3300005338|Ga0068868_100013739All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia → Thermoanaerobaculales → Thermoanaerobaculaceae → Thermoanaerobaculum → Thermoanaerobaculum aquaticum5949Open in IMG/M
3300005345|Ga0070692_10055538All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia → Thermoanaerobaculales → Thermoanaerobaculaceae → Thermoanaerobaculum → Thermoanaerobaculum aquaticum2071Open in IMG/M
3300005366|Ga0070659_101238295All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia → Thermoanaerobaculales → Thermoanaerobaculaceae → Thermoanaerobaculum → Thermoanaerobaculum aquaticum661Open in IMG/M
3300005447|Ga0066689_10361500All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium906Open in IMG/M
3300005468|Ga0070707_102280722All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia → Thermoanaerobaculales → Thermoanaerobaculaceae → Thermoanaerobaculum → Thermoanaerobaculum aquaticum509Open in IMG/M
3300005471|Ga0070698_102019635All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia → Thermoanaerobaculales → Thermoanaerobaculaceae → Thermoanaerobaculum → Thermoanaerobaculum aquaticum530Open in IMG/M
3300005518|Ga0070699_101546879All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia → Thermoanaerobaculales → Thermoanaerobaculaceae → Thermoanaerobaculum → Thermoanaerobaculum aquaticum608Open in IMG/M
3300005526|Ga0073909_10500432All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia → Thermoanaerobaculales → Thermoanaerobaculaceae → Thermoanaerobaculum → Thermoanaerobaculum aquaticum588Open in IMG/M
3300005539|Ga0068853_101525027All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia → Thermoanaerobaculales → Thermoanaerobaculaceae → Thermoanaerobaculum → Thermoanaerobaculum aquaticum647Open in IMG/M
3300005547|Ga0070693_100452010All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia → Thermoanaerobaculales → Thermoanaerobaculaceae → Thermoanaerobaculum → Thermoanaerobaculum aquaticum902Open in IMG/M
3300005548|Ga0070665_100196698All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia → Thermoanaerobaculales → Thermoanaerobaculaceae → Thermoanaerobaculum → Thermoanaerobaculum aquaticum2017Open in IMG/M
3300005569|Ga0066705_10310636All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia → Thermoanaerobaculales → Thermoanaerobaculaceae → Thermoanaerobaculum → Thermoanaerobaculum aquaticum999Open in IMG/M
3300005578|Ga0068854_100115150All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia → Thermoanaerobaculales → Thermoanaerobaculaceae → Thermoanaerobaculum → Thermoanaerobaculum aquaticum2033Open in IMG/M
3300005598|Ga0066706_10074193All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia → Thermoanaerobaculales → Thermoanaerobaculaceae → Thermoanaerobaculum → Thermoanaerobaculum aquaticum2391Open in IMG/M
3300005617|Ga0068859_101819045All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia → Thermoanaerobaculales → Thermoanaerobaculaceae → Thermoanaerobaculum → Thermoanaerobaculum aquaticum673Open in IMG/M
3300005618|Ga0068864_100097807All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia → Thermoanaerobaculales → Thermoanaerobaculaceae → Thermoanaerobaculum → Thermoanaerobaculum aquaticum2599Open in IMG/M
3300005718|Ga0068866_10077115All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia → Thermoanaerobaculales → Thermoanaerobaculaceae → Thermoanaerobaculum → Thermoanaerobaculum aquaticum1779Open in IMG/M
3300005764|Ga0066903_107292138All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia → Thermoanaerobaculales → Thermoanaerobaculaceae → Thermoanaerobaculum → Thermoanaerobaculum aquaticum572Open in IMG/M
3300005840|Ga0068870_10034267All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia → Thermoanaerobaculales → Thermoanaerobaculaceae → Thermoanaerobaculum → Thermoanaerobaculum aquaticum2597Open in IMG/M
3300005843|Ga0068860_101344177All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium735Open in IMG/M
3300005843|Ga0068860_102055130All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia → Thermoanaerobaculales → Thermoanaerobaculaceae → Thermoanaerobaculum → Thermoanaerobaculum aquaticum593Open in IMG/M
3300005893|Ga0075278_1016521All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia → Thermoanaerobaculales → Thermoanaerobaculaceae → Thermoanaerobaculum → Thermoanaerobaculum aquaticum987Open in IMG/M
3300005899|Ga0075271_10000961All Organisms → cellular organisms → Bacteria → Acidobacteria5338Open in IMG/M
3300005994|Ga0066789_10481479All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia → Thermoanaerobaculales → Thermoanaerobaculaceae → Thermoanaerobaculum → Thermoanaerobaculum aquaticum518Open in IMG/M
3300006049|Ga0075417_10198397All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia → Thermoanaerobaculales → Thermoanaerobaculaceae → Thermoanaerobaculum → Thermoanaerobaculum aquaticum949Open in IMG/M
3300006058|Ga0075432_10378247All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia → Thermoanaerobaculales → Thermoanaerobaculaceae → Thermoanaerobaculum → Thermoanaerobaculum aquaticum606Open in IMG/M
3300006358|Ga0068871_102308024All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia → Thermoanaerobaculales → Thermoanaerobaculaceae → Thermoanaerobaculum → Thermoanaerobaculum aquaticum513Open in IMG/M
3300006755|Ga0079222_10685211All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia → Thermoanaerobaculales → Thermoanaerobaculaceae → Thermoanaerobaculum → Thermoanaerobaculum aquaticum807Open in IMG/M
3300006853|Ga0075420_101065053All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia → Thermoanaerobaculales → Thermoanaerobaculaceae → Thermoanaerobaculum → Thermoanaerobaculum aquaticum695Open in IMG/M
3300006854|Ga0075425_100090375All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia → Thermoanaerobaculales → Thermoanaerobaculaceae → Thermoanaerobaculum → Thermoanaerobaculum aquaticum3471Open in IMG/M
3300006854|Ga0075425_102123328All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia → Thermoanaerobaculales → Thermoanaerobaculaceae → Thermoanaerobaculum → Thermoanaerobaculum aquaticum627Open in IMG/M
3300007004|Ga0079218_11254886All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia → Thermoanaerobaculales → Thermoanaerobaculaceae → Thermoanaerobaculum → Thermoanaerobaculum aquaticum775Open in IMG/M
3300009038|Ga0099829_10662478All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium867Open in IMG/M
3300009089|Ga0099828_11494414All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium596Open in IMG/M
3300009098|Ga0105245_10264708All Organisms → cellular organisms → Bacteria → Acidobacteria1674Open in IMG/M
3300009137|Ga0066709_100047123All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium4817Open in IMG/M
3300009792|Ga0126374_11450358All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium561Open in IMG/M
3300010303|Ga0134082_10489449All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium535Open in IMG/M
3300010337|Ga0134062_10614836All Organisms → cellular organisms → Bacteria → Acidobacteria561Open in IMG/M
3300010358|Ga0126370_11000928All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia → Thermoanaerobaculales → Thermoanaerobaculaceae → Thermoanaerobaculum → Thermoanaerobaculum aquaticum763Open in IMG/M
3300010358|Ga0126370_11486931All Organisms → cellular organisms → Bacteria → Acidobacteria643Open in IMG/M
3300010359|Ga0126376_11992462All Organisms → cellular organisms → Bacteria622Open in IMG/M
3300010359|Ga0126376_12905127All Organisms → cellular organisms → Bacteria529Open in IMG/M
3300010360|Ga0126372_11748212All Organisms → cellular organisms → Bacteria → Acidobacteria664Open in IMG/M
3300010362|Ga0126377_11490496All Organisms → cellular organisms → Bacteria → Acidobacteria750Open in IMG/M
3300010366|Ga0126379_13766250All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium508Open in IMG/M
3300010391|Ga0136847_11968250All Organisms → cellular organisms → Bacteria → Acidobacteria608Open in IMG/M
3300010398|Ga0126383_12233679All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia → Thermoanaerobaculales → Thermoanaerobaculaceae → Thermoanaerobaculum → Thermoanaerobaculum aquaticum633Open in IMG/M
3300010399|Ga0134127_11494645All Organisms → cellular organisms → Bacteria748Open in IMG/M
3300012198|Ga0137364_10976787All Organisms → cellular organisms → Bacteria → Acidobacteria641Open in IMG/M
3300012204|Ga0137374_10829751All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium684Open in IMG/M
3300012210|Ga0137378_10537724All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1077Open in IMG/M
3300012353|Ga0137367_10515136All Organisms → cellular organisms → Bacteria842Open in IMG/M
3300012510|Ga0157316_1064641All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium538Open in IMG/M
3300012532|Ga0137373_10698200All Organisms → cellular organisms → Bacteria → Acidobacteria757Open in IMG/M
3300012909|Ga0157290_10276213All Organisms → cellular organisms → Bacteria → Acidobacteria608Open in IMG/M
3300012948|Ga0126375_12076637All Organisms → cellular organisms → Bacteria504Open in IMG/M
3300012987|Ga0164307_10793842All Organisms → cellular organisms → Bacteria752Open in IMG/M
3300013102|Ga0157371_10460826All Organisms → cellular organisms → Bacteria → Acidobacteria935Open in IMG/M
3300013296|Ga0157374_10618893All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia → Thermoanaerobaculales → Thermoanaerobaculaceae → Thermoanaerobaculum → Thermoanaerobaculum aquaticum1093Open in IMG/M
3300013297|Ga0157378_12009892All Organisms → cellular organisms → Bacteria → Acidobacteria628Open in IMG/M
3300014166|Ga0134079_10303381All Organisms → cellular organisms → Bacteria → Acidobacteria710Open in IMG/M
3300015372|Ga0132256_102628280All Organisms → cellular organisms → Bacteria → Acidobacteria604Open in IMG/M
3300015374|Ga0132255_101221241All Organisms → cellular organisms → Bacteria → Acidobacteria1133Open in IMG/M
3300015374|Ga0132255_102298719All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium823Open in IMG/M
3300017936|Ga0187821_10397797All Organisms → cellular organisms → Bacteria563Open in IMG/M
3300017959|Ga0187779_10051575All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2400Open in IMG/M
3300017973|Ga0187780_10538998All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia → Thermoanaerobaculales → Thermoanaerobaculaceae → Thermoanaerobaculum → Thermoanaerobaculum aquaticum835Open in IMG/M
3300017974|Ga0187777_10083184All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2087Open in IMG/M
3300018031|Ga0184634_10062481All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1566Open in IMG/M
3300018032|Ga0187788_10234643All Organisms → cellular organisms → Bacteria → Acidobacteria722Open in IMG/M
3300018032|Ga0187788_10323412All Organisms → cellular organisms → Bacteria631Open in IMG/M
3300018053|Ga0184626_10411958All Organisms → cellular organisms → Bacteria → Acidobacteria538Open in IMG/M
3300018058|Ga0187766_10463216All Organisms → cellular organisms → Bacteria → Acidobacteria848Open in IMG/M
3300018079|Ga0184627_10405676All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium710Open in IMG/M
3300018920|Ga0190273_10718071All Organisms → cellular organisms → Bacteria → Acidobacteria778Open in IMG/M
3300019361|Ga0173482_10241950All Organisms → cellular organisms → Bacteria763Open in IMG/M
3300020150|Ga0187768_1036716All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1076Open in IMG/M
3300021090|Ga0210377_10293124All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium999Open in IMG/M
3300021560|Ga0126371_12696095All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium602Open in IMG/M
3300025899|Ga0207642_10770279All Organisms → cellular organisms → Bacteria → Acidobacteria610Open in IMG/M
3300025909|Ga0207705_11444034All Organisms → cellular organisms → Bacteria → Acidobacteria522Open in IMG/M
3300025910|Ga0207684_11084892All Organisms → cellular organisms → Bacteria667Open in IMG/M
3300025927|Ga0207687_10655142All Organisms → cellular organisms → Bacteria → Acidobacteria888Open in IMG/M
3300025934|Ga0207686_10025658All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia → Thermoanaerobaculales → Thermoanaerobaculaceae → Thermoanaerobaculum → Thermoanaerobaculum aquaticum3431Open in IMG/M
3300025937|Ga0207669_10912240All Organisms → cellular organisms → Bacteria → Acidobacteria734Open in IMG/M
3300025937|Ga0207669_11588763All Organisms → cellular organisms → Bacteria558Open in IMG/M
3300025939|Ga0207665_11035592All Organisms → cellular organisms → Bacteria → Acidobacteria653Open in IMG/M
3300025945|Ga0207679_10366885All Organisms → cellular organisms → Bacteria → Acidobacteria1259Open in IMG/M
3300025972|Ga0207668_12036308All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium517Open in IMG/M
3300025981|Ga0207640_10596473All Organisms → cellular organisms → Bacteria → Acidobacteria934Open in IMG/M
3300025986|Ga0207658_10386872All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia → Thermoanaerobaculales → Thermoanaerobaculaceae → Thermoanaerobaculum → Thermoanaerobaculum aquaticum1226Open in IMG/M
3300025989|Ga0207998_1003932All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia → Thermoanaerobaculales → Thermoanaerobaculaceae → Thermoanaerobaculum → Thermoanaerobaculum aquaticum1127Open in IMG/M
3300026034|Ga0208773_1030392All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia → Thermoanaerobaculales → Thermoanaerobaculaceae → Thermoanaerobaculum → Thermoanaerobaculum aquaticum698Open in IMG/M
3300027651|Ga0209217_1152058All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium640Open in IMG/M
3300027874|Ga0209465_10396716All Organisms → cellular organisms → Bacteria → Acidobacteria691Open in IMG/M
3300027875|Ga0209283_10939408All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium520Open in IMG/M
3300027964|Ga0256864_1182828All Organisms → cellular organisms → Bacteria → Acidobacteria598Open in IMG/M
3300028381|Ga0268264_11563304All Organisms → cellular organisms → Bacteria → Acidobacteria670Open in IMG/M
3300028381|Ga0268264_11658931All Organisms → cellular organisms → Bacteria → Acidobacteria650Open in IMG/M
3300031546|Ga0318538_10432418All Organisms → cellular organisms → Bacteria713Open in IMG/M
3300031771|Ga0318546_11278691All Organisms → cellular organisms → Bacteria → Acidobacteria515Open in IMG/M
3300031943|Ga0310885_10214321All Organisms → cellular organisms → Bacteria → Acidobacteria959Open in IMG/M
3300032017|Ga0310899_10591907All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium554Open in IMG/M
3300032180|Ga0307471_100618841All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1243Open in IMG/M
3300032180|Ga0307471_103603767All Organisms → cellular organisms → Bacteria548Open in IMG/M
3300032955|Ga0335076_11066068All Organisms → cellular organisms → Bacteria → Acidobacteria691Open in IMG/M
3300033501|Ga0326732_1086007All Organisms → cellular organisms → Bacteria → Acidobacteria515Open in IMG/M
3300033814|Ga0364930_0223136All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium639Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil9.17%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil6.67%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland5.83%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere5.83%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere5.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil4.17%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil4.17%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere4.17%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere4.17%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil3.33%
Rice Paddy SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil3.33%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere3.33%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment2.50%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil2.50%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil2.50%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere2.50%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere2.50%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere2.50%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.67%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil1.67%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.67%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil1.67%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere1.67%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.67%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere1.67%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment0.83%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Sediment0.83%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment0.83%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.83%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil0.83%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil0.83%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.83%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.83%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Soil0.83%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil0.83%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil0.83%
SedimentEnvironmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment0.83%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere0.83%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere0.83%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.83%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.83%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.83%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000364Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000651Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A10EnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004157Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2EnvironmentalOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300004480Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4EnvironmentalOpen in IMG/M
3300004633Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBioEnvironmentalOpen in IMG/M
3300005172Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132EnvironmentalOpen in IMG/M
3300005331Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaGHost-AssociatedOpen in IMG/M
3300005334Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2Host-AssociatedOpen in IMG/M
3300005338Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2Host-AssociatedOpen in IMG/M
3300005345Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaGEnvironmentalOpen in IMG/M
3300005366Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaGHost-AssociatedOpen in IMG/M
3300005447Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138EnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300005518Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaGEnvironmentalOpen in IMG/M
3300005526Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1EnvironmentalOpen in IMG/M
3300005539Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2Host-AssociatedOpen in IMG/M
3300005547Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaGEnvironmentalOpen in IMG/M
3300005548Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaGHost-AssociatedOpen in IMG/M
3300005569Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154EnvironmentalOpen in IMG/M
3300005578Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2Host-AssociatedOpen in IMG/M
3300005598Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155EnvironmentalOpen in IMG/M
3300005617Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2Host-AssociatedOpen in IMG/M
3300005618Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2Host-AssociatedOpen in IMG/M
3300005718Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2Host-AssociatedOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005840Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2Host-AssociatedOpen in IMG/M
3300005843Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2Host-AssociatedOpen in IMG/M
3300005893Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_0N_202EnvironmentalOpen in IMG/M
3300005899Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_5C_0N_302EnvironmentalOpen in IMG/M
3300005994Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049EnvironmentalOpen in IMG/M
3300006049Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1Host-AssociatedOpen in IMG/M
3300006058Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1Host-AssociatedOpen in IMG/M
3300006358Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2Host-AssociatedOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006853Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300007004Agricultural soil microbial communities from Utah to study Nitrogen management - NC CompostEnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009792Tropical forest soil microbial communities from Panama - MetaG Plot_12EnvironmentalOpen in IMG/M
3300010303Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015EnvironmentalOpen in IMG/M
3300010337Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015EnvironmentalOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010391Freshwater sediment microbial communities from Lake Superior, USA - Station SU-17. Combined Assembly of Gp0155404, Gp0155335, Gp0155336, Gp0155336, Gp0155403, Gp0155406EnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300012198Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012204Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012210Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012353Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012510Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.9.old.080610Host-AssociatedOpen in IMG/M
3300012532Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012909Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S149-409B-1EnvironmentalOpen in IMG/M
3300012948Tropical forest soil microbial communities from Panama - MetaG Plot_14EnvironmentalOpen in IMG/M
3300012987Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MGEnvironmentalOpen in IMG/M
3300013102Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaGHost-AssociatedOpen in IMG/M
3300013296Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaGHost-AssociatedOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300014166Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015EnvironmentalOpen in IMG/M
3300014968Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaGHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300017936Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1EnvironmentalOpen in IMG/M
3300017959Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MGEnvironmentalOpen in IMG/M
3300017973Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MGEnvironmentalOpen in IMG/M
3300017974Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MGEnvironmentalOpen in IMG/M
3300018031Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1EnvironmentalOpen in IMG/M
3300018032Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP10_20_MGEnvironmentalOpen in IMG/M
3300018053Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1EnvironmentalOpen in IMG/M
3300018058Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MGEnvironmentalOpen in IMG/M
3300018079Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b1EnvironmentalOpen in IMG/M
3300018920Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 ISEnvironmentalOpen in IMG/M
3300019361Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)EnvironmentalOpen in IMG/M
3300020150Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_20_MGEnvironmentalOpen in IMG/M
3300021090Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_b1 redoEnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300025899Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025909Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025927Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025934Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025937Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025939Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025945Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025972Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025981Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025986Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025989Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_0N_303 (SPAdes)EnvironmentalOpen in IMG/M
3300026034Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_5C_0N_302 (SPAdes)EnvironmentalOpen in IMG/M
3300027651Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027874Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)EnvironmentalOpen in IMG/M
3300027875Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027964Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT147D111 HiSeqEnvironmentalOpen in IMG/M
3300028381Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300031546Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23EnvironmentalOpen in IMG/M
3300031771Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19EnvironmentalOpen in IMG/M
3300031943Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2EnvironmentalOpen in IMG/M
3300032017Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032955Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5EnvironmentalOpen in IMG/M
3300033501Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF12FN SIP fractionEnvironmentalOpen in IMG/M
3300033814Sediment microbial communities from East River floodplain, Colorado, United States - 55_j17EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
INPhiseqgaiiFebDRAFT_10581689213300000364SoilRLLQDEFKDFRQTSSRKADELQGLFENLFSLENQILNTFVARDREAERYIFKD*
AP72_2010_repI_A10DRAFT_101276413300000651Forest SoilFNFDIVFLVFDGRNGEKLLQDEFKDFRQLSSRRADELQGLFENLFSLENQILNTFVARDREAERYIFGN*
Ga0062593_10252686013300004114SoilFKDFRQTGGRRADELQGLFENLFSLENQILNLFVARDREAERYIFTD*
Ga0062590_10209673413300004157SoilFLFDIVFLVFDGHTGEKLLQDEFKDFRQTGGRRADELQGLFENLFSLENQILNLFVAREREADRYLFTD*
Ga0062595_10055951213300004479SoilKLLQDEFKDFRQTGSKQRDELQGLFENLFSLENQILNTFVPRDREAERYIFD*
Ga0062592_10029954223300004480SoilDGRNGDKLLQDEFKDFRQLSSRRADELQGLFENLFSLENQILNTFVARDREAERYIFGN*
Ga0066395_1016509223300004633Tropical Forest SoilDGHTGEKLLQDEFKDFRQTGSKQRDELQGLFENLFSLENQILNTFVPRDREAERYIFTD*
Ga0066683_1090079223300005172SoilGEKLLQDEFKDFRQTGSRKADELQGLFENLFSLENQILNTFVARDREAERYIFTD*
Ga0070670_10027309613300005331Switchgrass RhizosphereFDIVLLVLDGHTGEKLLQDQFKDFRQTGSRRADELQGLFENLFSLESQILNTFVARDREAERYIFTN*
Ga0068869_10052654513300005334Miscanthus RhizosphereFLFDIVFLVFDGRNGEKLLQDEFKDFRQLSSRRADELQGLFENLFSLENQILNTFVARDREAERYIFGN*
Ga0068868_10001373913300005338Miscanthus RhizosphereFDGRNGDKLLQDEFKDFRQLSSRRADELQGLFENLFSLENQILNTFVARDREAERYIFGN
Ga0070692_1005553813300005345Corn, Switchgrass And Miscanthus RhizosphereLLVLDGHTGEKLLQDQFKDFRQTGSRRADELQGLFENLFSLESQILNTFVARDREAERYIFTN*
Ga0070659_10123829523300005366Corn RhizosphereNGDKLLQDEFKDFRQLSSRRADELQGLFENLFSLENQILNTFVARDREAERYIFGN*
Ga0066689_1036150023300005447SoilSGEKILQDEFKDFRQTGGRRADELQGLFENLCSLENQILNLFVAREREADRYIFTD*
Ga0070707_10228072223300005468Corn, Switchgrass And Miscanthus RhizosphereQDEFKDFRQTGGRRADELQGLFENLFSLENQILNLFVAREREADRYLFTD*
Ga0070698_10201963513300005471Corn, Switchgrass And Miscanthus RhizosphereEKLLQDEFKDFRQTGGRRADELQGLFENLFSLENQILNLFVAREREADRYLFTD*
Ga0070699_10154687913300005518Corn, Switchgrass And Miscanthus RhizosphereEKLLQDEFKDFRQASKRSVDELQGLFENLFSLENQILNTFVARDREAERYIFTD*
Ga0073909_1050043213300005526Surface SoilFLVFDGHSGEKLLQDEFKDFRQTGGRRADELQGLFENLFSLENQILNLFVAREREADRYLFTD*
Ga0068853_10152502713300005539Corn RhizosphereVFLVLDGRTGEKLLQDEFKDFRQASKRSVDELQGLFENLFSLENQILNTFVARDREAERYIFTD*
Ga0070693_10045201023300005547Corn, Switchgrass And Miscanthus RhizosphereFKDFRQTGGRRADELQGLFENLFSLENQILNLFVAREREADRYIFTD*
Ga0070665_10019669813300005548Switchgrass RhizosphereLQDEFKDFRQTGSKQRDELSGLFENLFSLENQILNTFVPRDREAERYIFTD*
Ga0066705_1031063613300005569SoilDGHTGEKLLQDEFKDFRQTGGRRADELQGLFENLFSLENQILNLFVAREREADRYLFTD*
Ga0068854_10011515013300005578Corn RhizosphereDFRQTGSRRADELQGLFENLFSLESQILNTFVARDREAERYIFTN*
Ga0066706_1007419313300005598SoilKILQDEFKDFRQTGGRRADELQGLFENLFSLENQILNLFVAREREADRYLFTD*
Ga0068859_10181904523300005617Switchgrass RhizosphereFLFDIVFLVFDGRNGDKLLQDEFKDFRQLSSRRADELQGLFENLFSLENQILNTFVARDREAERYIFGN*
Ga0068864_10009780723300005618Switchgrass RhizosphereKLLQDEFKDFRQTGSRNRDELQGLFENLFSLENQILNTFVPRDREAERYIFKD*
Ga0068866_1007711513300005718Miscanthus RhizosphereLVLDGRTGEKLLQDEFKDFRQASKRSVDELQGLFENLFSLENQILNTFVARDREAERYIFTD*
Ga0066903_10729213823300005764Tropical Forest SoilDEFKDFRQAGGRKADELQGLFENLFSLENQILNLFVAREREADRYIFTD*
Ga0068870_1003426723300005840Miscanthus RhizosphereFKDFRQTGSRRADELQGLFENLFSLESQILNTFVARDREAERYIFTN*
Ga0068860_10134417713300005843Switchgrass RhizosphereFDGRNGEKLLQDEFKDFRQLSSRRADELQGLFENLFSLENQILNTFVARDREAERYIFGN
Ga0068860_10205513023300005843Switchgrass RhizosphereDGHTGEKLLQDQFKDFRQTSNRKADELQGLFENLFSLESQILNTFVARDREAERYIFTN*
Ga0075278_101652113300005893Rice Paddy SoilPVTGQTSFRQIYVERTGFLFDIVFLVFDGKTGDRLLQDEFKDFRERNRRRADELLGLFQNLFSLEDQVLNMFVPRERAVQRYLFTR*
Ga0075271_1000096143300005899Rice Paddy SoilFLVFDGKTGDRLLQDEFKDFRERNRRRADELLGLFQNLFSLEDQVLNMFVPRERAVQRYLFTR*
Ga0066789_1048147913300005994SoilDIVFLVLDGRTGEKLLQDEFKDFRQTGSRNRDELQGLFENLFSLENQILNTFVPRDREAERYIFKE*
Ga0075417_1019839723300006049Populus RhizosphereDIVFLVFDGRSGEKILQDEFKDFRQTGGRRADELQGLFENLFSLENQILNLFVARDREAERYIFTD*
Ga0075432_1037824723300006058Populus RhizosphereDQFKDFRQTGSRRADELQGLFENLFSLESQILNTFVARDREAERYIFTN*
Ga0068871_10230802423300006358Miscanthus RhizosphereHSGEKLLQDEFKDFRQTGSANRSDELQGLFENLFSLENQILNLFVAREREADRYLFSS*
Ga0079222_1068521113300006755Agricultural SoilKLLQDEFKDFRQASKRSVDELQGLFENLFSLENQILNTFVARDREAERYIFTD*
Ga0075420_10106505313300006853Populus RhizosphereILQDQFKDFRQTGGRRADELQGLFENLFSLENQILNLFVARDREAERYIFTD*
Ga0075425_10009037533300006854Populus RhizosphereYRQVYVEQSGFLFDIVFLVFDGRSGERLLQDEFKDFRQTGASSRADELQGLFENLFSLENQILNLFVAREREADRYLFTS*
Ga0075425_10212332813300006854Populus RhizosphereLQDEFKDFRQTGGRRADELQGLFENLFSLENQILNLFVAREREADRYLFTD*
Ga0079218_1125488613300007004Agricultural SoilDIVFLVFDGRSGEKILQDQFKDFRQTGGRRADELQGLFENLFSLENQILNLFVARDREAERYIFTD*
Ga0099829_1066247823300009038Vadose Zone SoilDEFKDFRQTGGRRADELQGLFENLFSLENQILNLFVAREREADRYIFTD*
Ga0099828_1149441423300009089Vadose Zone SoilVFLVFDGRSGEKILQDEFKDFRQTGGRRADELQGLFENLFSLENQILNLFVARDREAERYIFTD*
Ga0105245_1026470813300009098Miscanthus RhizosphereEFKDFRQTGGRRADELQGLFENLFSLENQILNLFVARDRDAERYIFTD*
Ga0066709_10004712313300009137Grasslands SoilGEKILQDEFKDFRQTGGRRADELQGLFENLFSLENQILNLFVARDRDAERYLFTD*
Ga0126374_1145035813300009792Tropical Forest SoilTGFVFDIVFLVLDGRTGEKMLQDEFKDFRQTGGRRADELQGLFENLFSLENQILNLFVAREREADRYIFTD*
Ga0134082_1048944923300010303Grasslands SoilSGEKILQDEFKDFRQTGGRRADELQGLFENLFSLENQILNLFVARDRDAERYLFTD*
Ga0134062_1061483613300010337Grasslands SoilFDGRSGEKILQDEFKDFRQTGGRRADELQGLFENLFSLENQILNLFVARDRDAERYLFTD
Ga0126370_1100092823300010358Tropical Forest SoilYYRQVYVEQTGYVFDIVFLVLDGRTGEKLLQDEFKDFRQTGSKQRDELTGLFENLFSLENQILNTFVPRDREAERYIFTD*
Ga0126370_1148693123300010358Tropical Forest SoilLQDEFKDFRQTGGRRADELQGLFENLFSLENQILNLFVAREREADRYIFTD*
Ga0126376_1199246223300010359Tropical Forest SoilQDEFKDFRQTGSKSRDELQGLFENLFSLENQILNTFVPRDREAERYIFTD*
Ga0126376_1290512713300010359Tropical Forest SoilFKDFRQTGGRRADELQGLFENLFSLENQILNLFVAREREADRYLFTD*
Ga0126372_1174821213300010360Tropical Forest SoilIVLLVFDGHTGEKLLQDEFKDFRQTGGRRAGNDLEGLFENLFSLENQILNLFVARERDADRYIFTD*
Ga0126377_1149049623300010362Tropical Forest SoilRSGEKLLQDEFKDFRQAGGRKADELQGLFENLFSLENQILNTFVARDREAERYIFKD*
Ga0126379_1376625013300010366Tropical Forest SoilEQSGFLFDIVFMVFDGHSGEKLLQDEFKDFRQTGSANRNDELQGLFENLFSLENQILNLFVAREREADRYLFTS*
Ga0136847_1196825023300010391Freshwater SedimentFLVMDGRSGEKLLQDEFKDFRQAGGHKADELQGLFENLFSLENQILNLFVAREREADRYIFTN*
Ga0126383_1223367923300010398Tropical Forest SoilYYRQVYVEQTGYVFDIVFLVLDGRTGEKILQDEFKDFRQTGSKQRDELTGLFENLFSLENQILNTFVPRDREAERYIFTD*
Ga0134127_1149464523300010399Terrestrial SoilVLDGHTGEKLLQDQFKDFRQTGSRRADELQGLFENLFSLESQILNTFVARDREAERYIFTN*
Ga0137364_1097678723300012198Vadose Zone SoilFLVFDGRSGEKILQDEFKDFRQTGGRRADELQGLFENLFSLENQILNLFVARDRDAERYLFTD*
Ga0137374_1082975113300012204Vadose Zone SoilLFDIVFLVFDGHSGEKLLQDEFKDFRQTGGRRADELQGLFENLFSLENQILNLFVAREREADRYLFTD*
Ga0137378_1053772423300012210Vadose Zone SoilSGEKILQDEFKDFRQTGGRRADELQGLFENLFSLENQILNLFVARDREAERYIFTD*
Ga0137367_1051513613300012353Vadose Zone SoilLLQDEFKDFRQASSRKADELQGLFENLFSLENQILNLFVAREREADRYIFTD*
Ga0157316_106464113300012510Arabidopsis RhizosphereDFRQTGGRRADELQGLFENLFSLENQILNLFVARDRDAERYIFTD*
Ga0137373_1069820023300012532Vadose Zone SoilYVEQTGWLFDIVFLVFDGHSGEKILQDELKYVRQTGGRRADELQGLFENLFSLENQILNLFVARDREAERYIFTD*
Ga0157290_1027621323300012909SoilQDEFKDFRQLSSRRADELQGLFENLFSLENQILNTFVARDREAERYIFGN*
Ga0126375_1207663713300012948Tropical Forest SoilFKDFRQTSSRKADELQGLFENLFSLENQILNTFVARDREAERYIFKD*
Ga0164307_1079384213300012987SoilDFRQASKRQADELQGLFENLFSLENQILNTFVARDREAERYIFTD*
Ga0157371_1046082623300013102Corn RhizosphereKDFRQTGGRRADELQGLFENLFSLENQILNLFVARDRDAERYIFTD*
Ga0157374_1061889323300013296Miscanthus RhizosphereTGQTSFRQIYVERTGFLFDIVFMIFDGKTGDRLLQDEFKDFRERNRRRTDEMLGLFQNLFSLEDQILNMFVPRQRAVQRYLFAR*
Ga0157378_1200989223300013297Miscanthus RhizosphereGEKLLQDEFKDFRQASKRSADELQGLFENLFSLENQILNTFVARDREAERYIFTD*
Ga0134079_1030338123300014166Grasslands SoilLVFDGRSGEKILQDEFKDFRQTGGRRADELQGLFENLFSLENQILNLFVARDRDAERYLFTD*
Ga0157379_1124172123300014968Switchgrass RhizosphereLVFDGKTGDKILQDEFKDFRERNRRRADEMLGLFSNLFSLEDQVLNMFVPRERAVQRYLFTR*
Ga0132256_10262828023300015372Arabidopsis RhizosphereQVYVEQSGFLFDIVFLVLDGRSGEKLLQDEFKDFRQTGSSARSDELQGLFENLFSLENQILNLFVAREREADRYLFTS*
Ga0132255_10122124123300015374Arabidopsis RhizosphereLLVFDGHTGEKLLQDQFKDFRQTSNRKADELQGLFENLFSLESQILNTFVARDREAERYLFTN*
Ga0132255_10229871923300015374Arabidopsis RhizosphereGFLFDIVFMVFDGHSGEKLLQDEFKDFRQTGSANRSDELQGLFENLFSLENQILNLFVAREREADRYLFSS*
Ga0187821_1039779713300017936Freshwater SedimentKLLQDEFKDFRQTGSKQRDELQGLFENLFSLENQILNTFVPREREAERYVFTD
Ga0187779_1005157513300017959Tropical PeatlandSGYLFDIVFLVFDGRSGEKLLQDEFKDFRQSGSSARSDELQGLFENLFSLENQILNLFVARERDADRYLFKS
Ga0187780_1053899813300017973Tropical PeatlandYTSPIDGRQYTRQVYVEQTGYVFDIVFLVLDGRTGEKLLQDEFKDFRQTGSKQRDELTGLFENLFSLENQILNTFVPRDREAERYIFTD
Ga0187777_1008318413300017974Tropical PeatlandGEKLLQDEFKDFRQSGSSARSDELQGLFENLFSLENQILNLFVARERDADRYLFKS
Ga0184634_1006248113300018031Groundwater SedimentVFLVIDGRSGEKLLQDEFKDFRQAGGRKADELQGLFENLFSLENQILNLFVAREREADRYIFTN
Ga0187788_1023464313300018032Tropical PeatlandEFKDFRQFGGRKADELQGLFENLFSLENQILNMFVAREREADRYLFTD
Ga0187788_1032341213300018032Tropical PeatlandGHTGEKLLQDEFKDFRQSGGSNRADELQGLFENLFSLENRILNLFVAREREADRYLFTS
Ga0184626_1041195813300018053Groundwater SedimentGFLFDIVFLVFDGRSGEKILQDEFKDFRQTGGRRADELQGLFENLFSLENQILNLFVARDREAERYIFTD
Ga0187766_1046321623300018058Tropical PeatlandGYVFDIVFLVLDGRTGEKLLQDEFKDFRQTGSKQRDELTGLFENLFSLENQILNTFVPRDREAERYIFTD
Ga0184627_1040567613300018079Groundwater SedimentKILQDEFKDFRQTGGRRADELQGLFENLFSLENQILNLFVAREREADRYIFTN
Ga0190273_1071807113300018920SoilKLLQDEFKDFRQTGSRKADELQGLFENLFSLENQILNTFVARDREAERYIFTD
Ga0173482_1024195023300019361SoilDIVFLVFDGRNGDKLLQDEFKDFRQLSSRRADELQGLFENLFSLENQILNTFVARDREAERYIFGN
Ga0187768_103671613300020150Tropical PeatlandKDFRQSGSSARSDELQGLFENLFSLENQILNLFVARERDADRYLFKS
Ga0210377_1029312413300021090Groundwater SedimentGFLFDIVFLVFDGNSGEKILQDEFKDFRQTGGRRADELQGLFENLFSLENQILNLFVARDREAERYIFTD
Ga0126371_1269609513300021560Tropical Forest SoilFLVFDGHSGEKLLQDEFKDFRQTGGHRADELQGLFENLFSLENQILNLFVAREREADRYIFTD
Ga0207642_1077027913300025899Miscanthus RhizosphereVLLVLDGHTGEKLLQDQFKDFRQTGSRRADELQGLFENLFSLESQILNTFVARDREAERYIFTN
Ga0207705_1144403413300025909Corn RhizosphereDFRQTGSRRADELQGLFENLFSLESQILNTFVARDREAERYIFTN
Ga0207684_1108489213300025910Corn, Switchgrass And Miscanthus RhizosphereRSGEKILQDEFKDFRQTGGRRADELQGLFENLFSLENQILNLFVAREREADRYLFTD
Ga0207687_1065514223300025927Miscanthus RhizosphereSGEKILQDEFKDFRQTGGRRADELQGLFENLFSLENQILNLFVARDREAERYIFTD
Ga0207686_1002565813300025934Miscanthus RhizosphereDIVFLVLDGRTGEKLLQDEFKDFRQASKRSVDELQGLFENLFSLENQILNTFVARDREAERYIFTD
Ga0207669_1091224013300025937Miscanthus RhizosphereTGFLFDIVFLVLDGRTGEKLLQDEFKDFRQASKRSVDELQGLFENLFSLENQILNTFVARDREAERYIFTD
Ga0207669_1158876313300025937Miscanthus RhizosphereGERFDIVFLVLDGRTGEKLLQDEFKDFRQTGSRKADELQGLFENLFSLENQILNTFVARDREAERYIFTD
Ga0207665_1103559223300025939Corn, Switchgrass And Miscanthus RhizosphereGRSGEKLLQDEFKDFRQTGGRRSDELQGLFENLFSLENQILNLFVAREREADRYLFTD
Ga0207679_1036688523300025945Corn RhizosphereLVLDGRNGDKLLQDEFKDFRQLSSRRADELQGLFENLFSLENQILNTFVARDREAERYIFGN
Ga0207668_1203630813300025972Switchgrass RhizosphereDFRQTGGRRADELQGLFENLFSLENQILNLFVARDRDAERYIFTD
Ga0207640_1059647323300025981Corn RhizosphereKILQDEFKDFRQTGGRRADELQGLFENLFSLENQILNLFVARDRDAERYIFTD
Ga0207658_1038687213300025986Switchgrass RhizosphereRQIYVERTGFLFDIVFLVFDGKTGDKILQDEFKDFRERNRRRADEMLGLFSNLFSLEDQVLNMFVPRERAVQRYLFTR
Ga0207998_100393223300025989Rice Paddy SoilQTSFRQIYVERTGFLFDIVFLVFDGKTGDRLLQDEFKDFRERNRRRADELLGLFQNLFSLEDQVLNMFVPRERAVQRYLFTR
Ga0208773_103039213300026034Rice Paddy SoilFLVFDGKTGDRLLQDEFKDFRERNRRRADELLGLFQNLFSLEDQVLNMFVPRERAVQRYLFTR
Ga0209217_115205823300027651Forest SoilGEKILQDEFKDFRQTGGRRADELQGLFENLFSLENQILNLFVAREREADRYIFSD
Ga0209465_1039671613300027874Tropical Forest SoilYKDFRQASKRQADELQGLFENLFSLENQILNTFVARDREAERYIFTD
Ga0209283_1093940823300027875Vadose Zone SoilLQDEFKDFRQTGGRRADELQGLFENLFSLENQILNLFVAREREADRYIFTD
Ga0256864_118282813300027964SoilILQDQFKDFRQTGGRRADELQGLFENLFSLENQILNLFVARDREAERYIFTD
Ga0268264_1156330413300028381Switchgrass RhizosphereVFDGHTGEKLLQDQFKDFRQTSNRKADELQGLFENLFSLESQILNTFVARDREAERYIFT
Ga0268264_1165893123300028381Switchgrass RhizosphereLDGRNGDKLLQDEFKDFRQLSSRRADELQGLFENLFSLENQILNTFVARDREAERYIFGN
Ga0318538_1043241823300031546SoilKLLQDEFKDFRQTGSKQRDELTGLFENLFSLENQILNTFVPRDREAERYIFTD
Ga0318546_1127869113300031771SoilLQDEFKDFRQASKRSVDELQGLFENLFSLENQILNTFVARDREAERYIFTD
Ga0310885_1021432123300031943SoilQTGFLFDIVLLVLDGHTGEKLLQDQFKDFRQTGSRRADELQGLFENLFSLESQILNTFVARDREAERYIFTN
Ga0310899_1059190713300032017SoilFLFDIVLLVLDGRTGEKLLQDQFKDFRQTGSRRADELQGLFENLFSLESQILNTFVARDREAERYIFTN
Ga0307471_10061884123300032180Hardwood Forest SoilQSGFLFDIVFMVFDGHSGEKLLQDEFKDFRQTGSANRSDELQGLFENLFSLENQILNLFVAREREADRYLFSS
Ga0307471_10360376713300032180Hardwood Forest SoilTGFLFDIVFLVIDGRSGEKLLQDEFKDFRQAGGRKADELQGLFENLFSLENQILNLFVAREREADRYLFTD
Ga0335076_1106606813300032955SoilRQTGSANRSDELQGLFENLFSLENQILNLFVAREREADRYLFSS
Ga0326732_108600723300033501Peat SoilLLQDEFKDFRQTGSRNRDELQGLFENLFSLENQILNTFVPRDREAERYIFTD
Ga0364930_0223136_496_6393300033814SedimentKDFRQSNVNSRSDELQGLFENLFSLENQILNLFVSREREADRYLFTN

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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