NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F073584

Metagenome / Metatranscriptome Family F073584

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F073584
Family Type Metagenome / Metatranscriptome
Number of Sequences 120
Average Sequence Length 62 residues
Representative Sequence MGKIKTDELEERVGSAGITVNSTVKIDTITEKTTDAGVTIEGVQIKDGTIVTDLGYADIGLVIALG
Number of Associated Samples 101
Number of Associated Scaffolds 120

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 61.67 %
% of genes near scaffold ends (potentially truncated) 51.67 %
% of genes from short scaffolds (< 2000 bps) 81.67 %
Associated GOLD sequencing projects 94
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (64.167 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine
(29.167 % of family members)
Environment Ontology (ENVO) Unclassified
(63.333 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(95.833 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 0.00%    β-sheet: 48.48%    Coil/Unstructured: 51.52%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 120 Family Scaffolds
PF00565SNase 1.67
PF01541GIY-YIG 0.83
PF16945Phage_r1t_holin 0.83
PF00147Fibrinogen_C 0.83
PF01510Amidase_2 0.83
PF05345He_PIG 0.83


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms89.17 %
UnclassifiedrootN/A10.83 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000115|DelMOSum2011_c10099194All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED202959Open in IMG/M
3300000115|DelMOSum2011_c10112482All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED202868Open in IMG/M
3300000116|DelMOSpr2010_c10204998All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED202629Open in IMG/M
3300000117|DelMOWin2010_c10044232All Organisms → Viruses → Predicted Viral2023Open in IMG/M
3300001355|JGI20158J14315_10047932All Organisms → Viruses → Predicted Viral1832Open in IMG/M
3300001946|GOS2244_1051180All Organisms → Viruses → Predicted Viral2075Open in IMG/M
3300005057|Ga0068511_1005437All Organisms → Viruses → Predicted Viral1525Open in IMG/M
3300005239|Ga0073579_1171859All Organisms → cellular organisms → Bacteria19239Open in IMG/M
3300005432|Ga0066845_10119125All Organisms → Viruses → Predicted Viral1004Open in IMG/M
3300006402|Ga0075511_1172175All Organisms → Viruses → Predicted Viral1577Open in IMG/M
3300006484|Ga0070744_10069656All Organisms → Viruses → Predicted Viral1022Open in IMG/M
3300006752|Ga0098048_1045046All Organisms → Viruses → Predicted Viral1397Open in IMG/M
3300006925|Ga0098050_1173999All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED202539Open in IMG/M
3300007113|Ga0101666_1031245All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED202953Open in IMG/M
3300007345|Ga0070752_1297439All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED202616Open in IMG/M
3300007555|Ga0102817_1099222All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED202640Open in IMG/M
3300007640|Ga0070751_1079825All Organisms → Viruses → Predicted Viral1376Open in IMG/M
3300007778|Ga0102954_1105686Not Available793Open in IMG/M
3300009027|Ga0102957_1044325All Organisms → Viruses → Predicted Viral1525Open in IMG/M
3300009071|Ga0115566_10570135Not Available636Open in IMG/M
3300009193|Ga0115551_1037976All Organisms → Viruses → Predicted Viral2414Open in IMG/M
3300009423|Ga0115548_1171691Not Available678Open in IMG/M
3300009433|Ga0115545_1201264All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED202679Open in IMG/M
3300009437|Ga0115556_1304674All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED202562Open in IMG/M
3300009507|Ga0115572_10518955All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED202659Open in IMG/M
3300009593|Ga0115011_10060665All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED2022598Open in IMG/M
3300009593|Ga0115011_11275325All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED202637Open in IMG/M
3300009703|Ga0114933_10598523Not Available711Open in IMG/M
3300009790|Ga0115012_10371043All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1093Open in IMG/M
3300009790|Ga0115012_11155692All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium648Open in IMG/M
3300009790|Ga0115012_11819290All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED202534Open in IMG/M
3300009794|Ga0105189_1017758All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED202666Open in IMG/M
3300012525|Ga0129353_1627758All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED202594Open in IMG/M
3300012920|Ga0160423_10067771All Organisms → Viruses → Predicted Viral2558Open in IMG/M
3300012920|Ga0160423_10122834All Organisms → Viruses → Predicted Viral1830Open in IMG/M
3300012920|Ga0160423_10543091All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED202789Open in IMG/M
3300012953|Ga0163179_10048678All Organisms → Viruses → Predicted Viral2912Open in IMG/M
3300012953|Ga0163179_10233428All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED2021425Open in IMG/M
3300012954|Ga0163111_10517771All Organisms → Viruses → Predicted Viral1102Open in IMG/M
3300017713|Ga0181391_1004290All Organisms → Viruses → Predicted Viral3897Open in IMG/M
3300017731|Ga0181416_1145085All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED202572Open in IMG/M
3300017739|Ga0181433_1115010All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED202647Open in IMG/M
3300017742|Ga0181399_1010927All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED2022653Open in IMG/M
3300017742|Ga0181399_1042336All Organisms → Viruses → Predicted Viral1207Open in IMG/M
3300017744|Ga0181397_1193061All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED202511Open in IMG/M
3300017749|Ga0181392_1061576All Organisms → Viruses → Predicted Viral1144Open in IMG/M
3300017751|Ga0187219_1095108All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED202912Open in IMG/M
3300017756|Ga0181382_1172835All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED202554Open in IMG/M
3300017757|Ga0181420_1051698All Organisms → Viruses → Predicted Viral1317Open in IMG/M
3300017757|Ga0181420_1212737All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED202558Open in IMG/M
3300017764|Ga0181385_1207788All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED202591Open in IMG/M
3300017771|Ga0181425_1163884All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium703Open in IMG/M
3300017949|Ga0181584_10037387All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED2023482Open in IMG/M
3300018416|Ga0181553_10578235Not Available595Open in IMG/M
3300019267|Ga0182069_1327577All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED2021129Open in IMG/M
3300019274|Ga0182073_1159741All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED202652Open in IMG/M
3300019277|Ga0182081_1123548All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED202782Open in IMG/M
3300019281|Ga0182077_1461258All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED202614Open in IMG/M
3300020055|Ga0181575_10439763All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED202711Open in IMG/M
3300020175|Ga0206124_10233569Not Available717Open in IMG/M
3300020247|Ga0211654_1021162All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED2021044Open in IMG/M
3300020281|Ga0211483_10117270All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED202880Open in IMG/M
3300020312|Ga0211542_1008711All Organisms → Viruses → Predicted Viral2561Open in IMG/M
3300020367|Ga0211703_10067653All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED202873Open in IMG/M
3300020374|Ga0211477_10000300All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED20230916Open in IMG/M
3300020379|Ga0211652_10000968All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED2029301Open in IMG/M
3300020379|Ga0211652_10051261All Organisms → Viruses → Predicted Viral1238Open in IMG/M
3300020379|Ga0211652_10177796All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED202649Open in IMG/M
3300020380|Ga0211498_10331592All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED202573Open in IMG/M
3300020395|Ga0211705_10282348All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED202614Open in IMG/M
3300020401|Ga0211617_10001018All Organisms → cellular organisms → Bacteria14525Open in IMG/M
3300020401|Ga0211617_10199115All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED202834Open in IMG/M
3300020403|Ga0211532_10378778All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED202532Open in IMG/M
3300020403|Ga0211532_10378779All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED202532Open in IMG/M
3300020417|Ga0211528_10030300All Organisms → Viruses → Predicted Viral2548Open in IMG/M
3300020430|Ga0211622_10369496All Organisms → Viruses614Open in IMG/M
3300020437|Ga0211539_10154098All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED202937Open in IMG/M
3300020438|Ga0211576_10118693All Organisms → Viruses → Predicted Viral1450Open in IMG/M
3300020439|Ga0211558_10168056All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED2021053Open in IMG/M
3300020445|Ga0211564_10006583All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED2025763Open in IMG/M
3300020451|Ga0211473_10433325Not Available672Open in IMG/M
3300020452|Ga0211545_10251618All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED202811Open in IMG/M
3300020457|Ga0211643_10297242All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED202793Open in IMG/M
3300020457|Ga0211643_10443374All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage638Open in IMG/M
3300020459|Ga0211514_10071375All Organisms → Viruses → Predicted Viral1749Open in IMG/M
3300020460|Ga0211486_10440113All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED202557Open in IMG/M
3300020462|Ga0211546_10655096All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED202528Open in IMG/M
3300020464|Ga0211694_10049650All Organisms → Viruses → Predicted Viral1628Open in IMG/M
3300020465|Ga0211640_10003135All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED20210432Open in IMG/M
3300020470|Ga0211543_10223376All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED202927Open in IMG/M
3300020470|Ga0211543_10566446Not Available535Open in IMG/M
3300020478|Ga0211503_10074219All Organisms → Viruses → Predicted Viral2053Open in IMG/M
3300020478|Ga0211503_10144031All Organisms → Viruses → Predicted Viral1374Open in IMG/M
3300020478|Ga0211503_10404982Not Available731Open in IMG/M
3300021365|Ga0206123_10153588All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1052Open in IMG/M
3300021368|Ga0213860_10004582All Organisms → cellular organisms → Bacteria5651Open in IMG/M
3300021389|Ga0213868_10631099All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED202556Open in IMG/M
3300021958|Ga0222718_10381274All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED202709Open in IMG/M
3300022074|Ga0224906_1000495Not Available21753Open in IMG/M
3300022074|Ga0224906_1195722All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED202553Open in IMG/M
3300024346|Ga0244775_11034014All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED202647Open in IMG/M
3300025816|Ga0209193_1079914Not Available845Open in IMG/M
3300025890|Ga0209631_10356424All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED202689Open in IMG/M
3300026134|Ga0208815_1026434All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED202753Open in IMG/M
3300026447|Ga0247607_1074345All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED202599Open in IMG/M
3300026458|Ga0247578_1096818All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED202579Open in IMG/M
3300026462|Ga0247568_1080982All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED202635Open in IMG/M
3300026465|Ga0247588_1084715All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED202632Open in IMG/M
3300026465|Ga0247588_1093011All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED202602Open in IMG/M
3300026470|Ga0247599_1125942Not Available534Open in IMG/M
3300026495|Ga0247571_1141983All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED202565Open in IMG/M
3300026500|Ga0247592_1170837All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED202517Open in IMG/M
3300027906|Ga0209404_10237113All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED2021144Open in IMG/M
3300028109|Ga0247582_1168911Not Available559Open in IMG/M
3300028197|Ga0257110_1001533All Organisms → cellular organisms → Bacteria → Proteobacteria10856Open in IMG/M
3300028282|Ga0256413_1245216All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED202637Open in IMG/M
3300028290|Ga0247572_1152065All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED202578Open in IMG/M
3300029319|Ga0183748_1004437All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED2026944Open in IMG/M
3300031851|Ga0315320_10291888All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED2021166Open in IMG/M
3300032073|Ga0315315_10770883All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED202877Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine29.17%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater12.50%
SeawaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Seawater10.83%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine7.50%
Salt MarshEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh5.83%
Pelagic MarineEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine5.83%
Surface SeawaterEnvironmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater3.33%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous3.33%
MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine3.33%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Seawater1.67%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine1.67%
Marine OceanicEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine Oceanic1.67%
SeawaterEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater1.67%
EstuarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine1.67%
SeawaterEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Seawater1.67%
Pelagic MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine1.67%
Marine WaterEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine Water0.83%
MarineEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine0.83%
EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine0.83%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water0.83%
Deep SubsurfaceEnvironmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface0.83%
Volcanic Co2 Seep SeawaterEnvironmental → Aquatic → Marine → Volcanic → Unclassified → Volcanic Co2 Seep Seawater0.83%
Pond WaterEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water0.83%
WaterEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Water0.83%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000115Marine microbial communities from Delaware Coast, sample from Delaware MO Summer July 2011EnvironmentalOpen in IMG/M
3300000116Marine microbial communities from Delaware Coast, sample from Delaware MO Spring March 2010EnvironmentalOpen in IMG/M
3300000117Marine microbial communities from Delaware Coast, sample from Delaware MO Winter December 2010EnvironmentalOpen in IMG/M
3300001355Pelagic Microbial community sample from North Sea - COGITO 998_met_08EnvironmentalOpen in IMG/M
3300001946Marine microbial communities from North James Bay, Santigo Island, EquadorEnvironmentalOpen in IMG/M
3300005057Marine water microbial communities from the East Sea, Korea with extracellular vesicles - East-Sea-0.2umEnvironmentalOpen in IMG/M
3300005239Environmental Genome Shotgun Sequencing: Ocean Microbial Populations from the Gulf of MaineEnvironmentalOpen in IMG/M
3300005432Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201310SV78EnvironmentalOpen in IMG/M
3300006402Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_RNA2 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006484Estuarine microbial communities from the Columbia River estuary, USA - metaG S.535EnvironmentalOpen in IMG/M
3300006752Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaGEnvironmentalOpen in IMG/M
3300006925Marine viral communities from the Subarctic Pacific Ocean - 14_ETSP_OMZ_AT15311 metaGEnvironmentalOpen in IMG/M
3300007113Seawater microbiome, Papua New Guinea CO2 seep, Upa-Upasina 'bubble' site, Water-isEnvironmentalOpen in IMG/M
3300007345Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30EnvironmentalOpen in IMG/M
3300007555Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.555EnvironmentalOpen in IMG/M
3300007640Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28EnvironmentalOpen in IMG/M
3300007778Water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2A_C_H2O_MGEnvironmentalOpen in IMG/M
3300009027Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_A_H2O_MGEnvironmentalOpen in IMG/M
3300009071Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405EnvironmentalOpen in IMG/M
3300009193Pelagic marine microbial communities from North Sea - COGITO_mtgs_110321EnvironmentalOpen in IMG/M
3300009423Pelagic marine microbial communities from North Sea - COGITO_mtgs_100423EnvironmentalOpen in IMG/M
3300009433Pelagic marine microbial communities from North Sea - COGITO_mtgs_100330EnvironmentalOpen in IMG/M
3300009437Pelagic marine microbial communities from North Sea - COGITO_mtgs_110414EnvironmentalOpen in IMG/M
3300009507Pelagic marine microbial communities from North Sea - COGITO_mtgs_120607EnvironmentalOpen in IMG/M
3300009593Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 MetagenomeEnvironmentalOpen in IMG/M
3300009703Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 4SBTROV12_W25 metaGEnvironmentalOpen in IMG/M
3300009790Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT10 MetagenomeEnvironmentalOpen in IMG/M
3300009794Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3438_5245EnvironmentalOpen in IMG/M
3300012525Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.2_RNA2 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012920Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St8 metaGEnvironmentalOpen in IMG/M
3300012953Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 2 MetagenomeEnvironmentalOpen in IMG/M
3300012954Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St18 metaGEnvironmentalOpen in IMG/M
3300017713Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 14 SPOT_SRF_2010-08-11EnvironmentalOpen in IMG/M
3300017731Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 39 SPOT_SRF_2013-01-16EnvironmentalOpen in IMG/M
3300017739Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 56 SPOT_SRF_2014-09-10EnvironmentalOpen in IMG/M
3300017742Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 22 SPOT_SRF_2011-05-21EnvironmentalOpen in IMG/M
3300017744Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 20 SPOT_SRF_2011-02-23EnvironmentalOpen in IMG/M
3300017749Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 15 SPOT_SRF_2010-09-15EnvironmentalOpen in IMG/M
3300017751Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 13 SPOT_SRF_2010-07-21 (version 2)EnvironmentalOpen in IMG/M
3300017756Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 5 SPOT_SRF_2009-10-22EnvironmentalOpen in IMG/M
3300017757Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 43 SPOT_SRF_2013-05-22EnvironmentalOpen in IMG/M
3300017764Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 8 SPOT_SRF_2010-02-11EnvironmentalOpen in IMG/M
3300017771Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 48 SPOT_SRF_2013-11-13EnvironmentalOpen in IMG/M
3300017949Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071406AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018416Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011502XT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300019267Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 071402VT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019274Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 071405CT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019277Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 071412AT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019281Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 071409AT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300020055Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101411CT metaG (spades assembly)EnvironmentalOpen in IMG/M
3300020175Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160321_2EnvironmentalOpen in IMG/M
3300020247Marine microbial communities from Tara Oceans - TARA_B100000902 (ERX556048-ERR598962)EnvironmentalOpen in IMG/M
3300020281Marine microbial communities from Tara Oceans - TARA_A100001035 (ERX556022-ERR599116)EnvironmentalOpen in IMG/M
3300020312Marine microbial communities from Tara Oceans - TARA_B100000287 (ERX556125-ERR598977)EnvironmentalOpen in IMG/M
3300020367Marine microbial communities from Tara Oceans - TARA_B100000508 (ERX556112-ERR599005)EnvironmentalOpen in IMG/M
3300020374Marine microbial communities from Tara Oceans - TARA_A100001011 (ERX291766-ERR318618)EnvironmentalOpen in IMG/M
3300020379Marine microbial communities from Tara Oceans - TARA_B100000902 (ERX556001-ERR599168)EnvironmentalOpen in IMG/M
3300020380Marine microbial communities from Tara Oceans - TARA_B000000565 (ERX555945-ERR599058)EnvironmentalOpen in IMG/M
3300020395Marine microbial communities from Tara Oceans - TARA_B100000427 (ERX555987-ERR599133)EnvironmentalOpen in IMG/M
3300020401Marine microbial communities from Tara Oceans - TARA_B100000212 (ERX555985-ERR599139)EnvironmentalOpen in IMG/M
3300020403Marine microbial communities from Tara Oceans - TARA_B100000085 (ERX556015-ERR599145)EnvironmentalOpen in IMG/M
3300020417Marine microbial communities from Tara Oceans - TARA_B100000073 (ERX556034-ERR599082)EnvironmentalOpen in IMG/M
3300020430Marine microbial communities from Tara Oceans - TARA_B100000683 (ERX556126-ERR599160)EnvironmentalOpen in IMG/M
3300020437Marine microbial communities from Tara Oceans - TARA_B100000282 (ERX555906-ERR599074)EnvironmentalOpen in IMG/M
3300020438Marine microbial communities from Tara Oceans - TARA_B100001094 (ERX555907-ERR598942)EnvironmentalOpen in IMG/M
3300020439Marine microbial communities from Tara Oceans - TARA_B100001939 (ERX556062-ERR599029)EnvironmentalOpen in IMG/M
3300020445Marine microbial communities from Tara Oceans - TARA_B100001996 (ERX555961-ERR599087)EnvironmentalOpen in IMG/M
3300020451Marine microbial communities from Tara Oceans - TARA_B100001778 (ERX555927-ERR598996)EnvironmentalOpen in IMG/M
3300020452Marine microbial communities from Tara Oceans - TARA_B100001173 (ERX556054-ERR599078)EnvironmentalOpen in IMG/M
3300020457Marine microbial communities from Tara Oceans - TARA_B100001113 (ERX555941-ERR599014)EnvironmentalOpen in IMG/M
3300020459Marine microbial communities from Tara Oceans - TARA_X000000368 (ERX555913-ERR599095)EnvironmentalOpen in IMG/M
3300020460Marine microbial communities from Tara Oceans - TARA_A100001037 (ERX555931-ERR599097)EnvironmentalOpen in IMG/M
3300020462Marine microbial communities from Tara Oceans - TARA_B100001559 (ERX556040-ERR598986)EnvironmentalOpen in IMG/M
3300020464Marine microbial communities from Tara Oceans - TARA_B100000530 (ERX556075-ERR599101)EnvironmentalOpen in IMG/M
3300020465Marine microbial communities from Tara Oceans - TARA_B100000579 (ERX556060-ERR598961)EnvironmentalOpen in IMG/M
3300020470Marine microbial communities from Tara Oceans - TARA_B100000287 (ERX555976-ERR599053)EnvironmentalOpen in IMG/M
3300020478Marine microbial communities from Tara Oceans - TARA_B100000029 (ERX556025-ERR599111)EnvironmentalOpen in IMG/M
3300021365Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160316_1EnvironmentalOpen in IMG/M
3300021368Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO550EnvironmentalOpen in IMG/M
3300021389Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO127EnvironmentalOpen in IMG/M
3300021958Estuarine water microbial communities from San Francisco Bay, California, United States - C33_27DEnvironmentalOpen in IMG/M
3300022074Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 56 SPOT_SRF_2014-09-10 (v2)EnvironmentalOpen in IMG/M
3300024346Whole water sample coassemblyEnvironmentalOpen in IMG/M
3300025816Pelagic marine microbial communities from North Sea - COGITO_mtgs_100330 (SPAdes)EnvironmentalOpen in IMG/M
3300025890Pelagic Microbial community sample from North Sea - COGITO 998_met_08 (SPAdes)EnvironmentalOpen in IMG/M
3300026134Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3438_5245 (SPAdes)EnvironmentalOpen in IMG/M
3300026447Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 125R_r (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300026458Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 36R (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300026462Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 17R (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300026465Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 48R (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300026470Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 73R (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300026495Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 24R (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300026500Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 54R (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300027906Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 Metagenome (SPAdes)EnvironmentalOpen in IMG/M
3300028109Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 41R (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300028197Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2015_P26_10mEnvironmentalOpen in IMG/M
3300028282Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - WCR_77 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300028290Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 25R (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300029319Marine viral communities collected during Tara Oceans survey from station TARA_032 - TARA_A100001516EnvironmentalOpen in IMG/M
3300031851Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 40m 21515EnvironmentalOpen in IMG/M
3300032073Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 40m 3416EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
DelMOSum2011_1009919423300000115MarineMGKIKTDELEERVGSAGITVNSTVKIDTMNEKTTDAGVTIEGVQIKDGTIVTDLGYADIGLVIALG*
DelMOSum2011_1011248233300000115MarineMGKIKTDELEERVGSAGITVNSTVKIDTITEKTSGSGVTIDGLLIKDGAIPSSAVTGAVDIGLVIALG*
DelMOSpr2010_1020499823300000116MarineMGKIKTDELEERVGSAGITVNSTVKIDTITEKTTDAGVTIEGVQIKDGTIVTDLGYADIGLVIALG*
DelMOWin2010_1004423213300000117MarineINLMGKIKTDELEERVGSAGITVNSTVKIDTITEKTSNAGVTIEGVTLKDGSIVGAVDIGLVIALG*
JGI20158J14315_1004793233300001355Pelagic MarineMGKIKTDELEERVGSAGITVNSTVKIDTMNEXTTDAGVTIEGVQIKDGTIVTDLGYADIGLVIALG*
GOS2244_105118023300001946MarineMGKIKTDELEERVGSAGITVNSTVKVDTITEKTTDAGVTIEGVTLKDGAVVGAVDIGLIIALG*
Ga0068511_100543723300005057Marine WaterMGKIITDELEERVGSAGITVNSTVKIDTITEKTSGSGVTIDGLLIKDGAIDSSAVTGAVDIGLVIALS*
Ga0073579_117185933300005239MarineMGKIKTDELEERVGSAGITVNSTVKVDTITEKTSDAGVTIEGVTLKDGAVVGAVDIGLVIALG*
Ga0066845_1011912533300005432MarineMGKIKTDELEERVGSAGITVNSTVKVDTITEKTSNAGVTIEGVTLKDGAVVGAVDIGLVIALG*
Ga0075511_117217543300006402AqueousMGKIKTDELEERVGSAGITVNSTVKIDTITEKTTDAGVTIEGVQIKDGTIVTDLGYADIG
Ga0070744_1006965633300006484EstuarineMGKIKTDELEERVGSAGITVNSTVKIDTITEKTSNAGVTIEGVTLKDGSIVGAVDIGLVIALG*
Ga0098048_104504633300006752MarineMGKIKTDELEERVGSAGITVNSTVKIDTMTEKTTDAGVTIEGVQIKDGTIVTDLGYADIGLVIALG*
Ga0098050_117399923300006925MarineMGKIKTDELEERVGSAGITVNSTVKIDTMTEKTTDAGVTIEGVQIKDGTIVTDLGYA
Ga0101666_103124523300007113Volcanic Co2 Seep SeawaterMGKIKTDELEERVGSAGITVNSTVKIDTLTEKTTDAGVTIEGVQIKDGTIVTDLGYADIGLVIALG*
Ga0070752_129743913300007345AqueousTDELEERVGSAGITVNSTVKIDTITEKTTDAGVTIEGVQIKDGTIVTDLGYADIGLVIALG*
Ga0102817_109922223300007555EstuarineMGKIKTDELEERVGSAGITVNSTVKIDTITEKTSNAGVTIEGVTLKDGSIVGAVDIGLV
Ga0070751_107982513300007640AqueousMGKIKTDELEERVGSAGITVNSTVKIDTTTEKTTDAGVTIEGVQIKDGTIVTDLGYADIG
Ga0102954_110568633300007778WaterAGITVNSTVKIDTMTEKTTDAGVTIEGVQIKDGTIVTDLGYADIGLVIALG*
Ga0102957_104432533300009027Pond WaterMGKIKTDELEERVGSAGITVNSTVKIDTMTEKTADAGVTIEGVQIKDGTIVTDLGYADIGLVIALG*
Ga0115566_1057013533300009071Pelagic MarineAGITVNSTVKIDTMNEKTTDAGVTIEGVQIKDGTIVTDLGYADIGLVIALG*
Ga0115551_103797653300009193Pelagic MarineMGKIKTDELEERVGSAGITVNSTVKIDTMNEKTTDAGVTIEGVQIKDGTIVTDLG
Ga0115548_117169133300009423Pelagic MarineGSAGITVNSTVKIDTMNEKTTDAGVTIEGVQIKDGTIVTDLGYADIGLVIALG*
Ga0115545_120126413300009433Pelagic MarineKTDELEERVGSAGITVNSTVKIDTMNEKTTDAGVTIEGVQIKDGTIVTDLGYADIGLVIALG*
Ga0115556_130467413300009437Pelagic MarineDELEERVGSAGITVNSTVKIDTMNEKTTDAGVTIEGVQIKDGTIVTDLGYADIGLVIALG
Ga0115572_1051895513300009507Pelagic MarineINLMGKIKTDELEERVGSAGITVNSTVKIDTMNEKTTDAGVTIEGVQIKDGTIVTDLGYADIGLVIALG*
Ga0115011_1006066533300009593MarineMGKIKTDELEERVGSAGITVNSTVKVDTIAEKTSGSGVTIDGLLIKDGAIPASAVTGAVDIGLVIALG*
Ga0115011_1127532523300009593MarineMGKIKTDELEERVGSAGITVNSTVKIDTITEKTSDAGVTIEGVTLKDGAVVGAVDIGLVIALG*
Ga0114933_1059852333300009703Deep SubsurfaceEERVGSAGVTVNSTMKIDTIAEKTSANGVTIDGVNIKDGGITTDLGYADIGLVIALG*
Ga0115012_1037104323300009790MarineMGKIVTDELEERVGSAGVTVNSTMKIDTIAEKTSANGVTIDGLLIKDGAIPSSGVTGAVDIGLVIALG*
Ga0115012_1115569213300009790MarineFVMGKIVTDELEERVGGSGITVNSTVKIDTIAEKTSNAGVTIDGVTIKDGAITGSGVVDIGLIIALS*
Ga0115012_1181929023300009790MarineMGKIKTDELEERVGSAGITVNSTVKIDTIAEKTSANGVTIDGLLIKDGAIPASGVTGAVDIGLVIALG*
Ga0105189_101775823300009794Marine OceanicMGKIKTDELEERVGSAGITVNSTVKIDTITEKTSNAGVTIEGVTLKDGAVVGAVDIGLVIALG*
Ga0129353_162775823300012525AqueousKTDELEERVGSAGITVNSTVKIDTITEKTTDAGVTIEGVQIKDGTIVTDLGYADIGLVIALG*
Ga0160423_1006777133300012920Surface SeawaterMGKIKTDELEERVGSAGITVNSTVKVDTITEKTSGSGVTIDGLLIKDGAISSSAVTGAVDIGLVIALG*
Ga0160423_1012283423300012920Surface SeawaterMGKIKTDELEERVGSAGITVNSTVKIDTITEKTTDAGVTIEGVTLKDGAVVGAVDIGLVIALG*
Ga0160423_1054309133300012920Surface SeawaterELEERVGSAGITVNSTVKIDTITEKTSDAGVTIEGVTLKDGAVVGAVDIGLVIALG*
Ga0163179_1004867863300012953SeawaterLGKIKTDELEERVGSAGITVNSTVKVDTITEKTSNAGVTIEGVTLKDGAVVGAVDIGLVIALG*
Ga0163179_1023342813300012953SeawaterKTDELEERVGSAGITVNSTVKIDTITEKTSNAGVTIEGVTLKDGSIVGAVDIGLVIALG*
Ga0163111_1051777133300012954Surface SeawaterMGKIKTDELEERVGSAGITVNSTVKVDTITEKTTNAGVTIEGVTLKDGSIVGAVDIGLVIALG*
Ga0181391_100429083300017713SeawaterLGKIKTDELEERVGSAGITVNSTVKIDTITEKTSGSGVTIDGLLIKDGAIPSSAVTGAVDIGLVIALG
Ga0181416_114508523300017731SeawaterMGKIKTDELEERVGSAGITVNSTVKVDTITEKTTNNGVTIEGVTLKDGAVVGAVDIGLVIALG
Ga0181433_111501013300017739SeawaterDELEERVGSAGITVNSTVKIDTITEKTSNAGVTIEGVTLKDGSIVGAVDIGLVIALG
Ga0181399_101092723300017742SeawaterMGKIKTDALEERVGSAGITVNSTVKIDTMTEKTTDAGVTIEGVQIKDGTIVTDLGYADIGLVIALG
Ga0181399_104233643300017742SeawaterMGKIKTDELEERVGSAGITVNSTVKIDTMTEKTTDAGVTIEGVQIKDGTIVTDLGY
Ga0181397_119306113300017744SeawaterMGKIKTDELEERVGSAGITVNSTVKIDTMTEKTTDAGVTIEGVTLKDGSIVGAVDIGLVIALG
Ga0181392_106157613300017749SeawaterMGKIKTDELEERVGSAGITVNSTVKIDTMTEKTTDAGVTIEGVQIKDGTIVTDLGYADI
Ga0187219_109510813300017751SeawaterRVGSAGITVNSTVKIDTITEKTSNAGVTIEGVTLKDGSIVGAVDIGLVIALG
Ga0181382_117283523300017756SeawaterNFMGKIKTDELEERVGSAGITVNSTVKIDTITEKTSNAGVTIEGVTLKDGSIVGAVDIGLVIALG
Ga0181420_105169843300017757SeawaterKIKTDELEERVGSAGITVNSTVKVDTITEKTTNNGVTIEGVTLKDGAVVGAVDIGLVIAL
Ga0181420_121273723300017757SeawaterINFMGKIKTDELEERVGSAGITVNSTVKIDTMTEKTTDAGVTIEGVQIKDGTIVTDLGYADIGLVIALG
Ga0181385_120778813300017764SeawaterSAGITVNSTVKIDTITEKTSDAGVTIEGVTLKDGSIVGAVDIGLVIALG
Ga0181425_116388423300017771SeawaterMGKIKTDELEERVGSAGITVNSTVKIDTMTEKTTDAGVTIEGVQIKDGTIVTDLGYADIGLVIAL
Ga0181584_1003738743300017949Salt MarshMGKIKTDELEERVGSAGITVNSTVKIDTITEKTTDAGVTIEGVQIKDGTIVTDLGYADIGLVIALG
Ga0181553_1057823533300018416Salt MarshAGITVNSTVKIDTITEKTTDAGVTIEGVQIKDGTIVTDLGYADIGLVIALG
Ga0182069_132757713300019267Salt MarshRINLMGKIKTDELEERVGSAGITVNSTVKIDTITEKTTDAGVTIEGVQIKDGTIVTDLGYADIGLVIALG
Ga0182073_115974113300019274Salt MarshKTDELEERVGSAGITVNSTVKIDTITEKTTDAGVTIEGVQIKDGTIVTDLGYADIGLVIALG
Ga0182081_112354833300019277Salt MarshLMGKIKTDELEERVGSAGITVNSTVKIDTITEKTTDAGVTIEGVQIKDGTIVTDLGYADIGLVIALG
Ga0182077_146125823300019281Salt MarshGKIKTDELEERVGSAGITVNSTVKIDTITEKTTDAGVTIEGVQIKDGTIVTDLGYADIGLVIALG
Ga0181575_1043976313300020055Salt MarshMGKIKTDELEERVGSAGITVNSTVKIDTLTEKTTDAGVTIEGVQIKDGTIVTDLGYADIGLVIALG
Ga0206124_1023356933300020175SeawaterMGKIKTDELEERVGSAGITVNSTVKIDTMNEKTTDAGVTIEGVQIKDGTIVTDLGYADIG
Ga0211654_102116223300020247MarineMGKIKTDELEERVGSAGITVNSTVKIDTITEKTSDAGVTIEGVTLKDGAVVGAVDIGLVIALG
Ga0211483_1011727013300020281MarineNKDYSVQGEIMGKIVTDELEERVGSAGVTVNSTMKIDTIAEKTSGNGVTIDGLNIKDGAVAGAVDIGLVIALG
Ga0211542_100871133300020312MarineLGKIKTDELEERVGSAGITVNSTVKVDTITEKTTDAGVTIEGVTLKDGAVVGAVDIGLIIALG
Ga0211703_1006765333300020367MarineMGKIVTDELEERVGSAGVTVNSTMKIDTIAEKTSANGVTIDGLLIKDGAIPASGVTGAVDIGLVIALG
Ga0211477_10000300593300020374MarineLGKIKTDELEERVGSAGITVNSTVKVDTITEKTSNAGVTIEGVTLKDGSIVGAVDIGLVIALG
Ga0211652_10000968173300020379MarineMGKIKTDELEERVGSAGITVNSTVKIDTITEKTSDAGVTIEGVTLKDGAIVGAVDIGLVIALG
Ga0211652_1005126113300020379MarineMGKIKTDELEERVGSAGITVNSTVKIDTITEKTSDAGVTIEGVTLKDGAVVGAVDIGLIIALG
Ga0211652_1017779613300020379MarineELEERVGSAGITVNSIVKIDTITEKTSDAGVTIEGVTLKDGAVVGAVDIGLVIALG
Ga0211498_1033159223300020380MarineMGKIKTDELEERVGSAGITVNSTVKVDTITEKTSNAGVTIEGVTLKDGAVVGAVDIGLVIALG
Ga0211705_1028234823300020395MarineMGKIVTDELEERVGSAGVTVNSTMKIDTIAEKTSANGVTIDGVNIKDGGITTDLGYADIGLVIALG
Ga0211617_10001018183300020401MarineMGKIITDELEERVGSAGITVNSTVKIDTITEKTTDAGVTIEGVTLKDGAVVGAVDIGLVIALS
Ga0211617_1019911523300020401MarineMGKIVTDELEERVGSAGVTVNSTMKIDTIAEKTSANGVTIDGLLIKDGAIPASGVT
Ga0211532_1037877813300020403MarineGSAGITVNSTVKVDTITEKTTDAGVTIEGVTLKDGAVVGAVDIGLVIALG
Ga0211532_1037877913300020403MarineGSAGITVNSTVKVDTITEKTTDAGVTIEGVTLKDGAVVGAVDIGLIIALG
Ga0211528_1003030023300020417MarineMGKIKTDELEERVGSAGITVNSTVKIDTITEKTTDAGVTIEGVTLKDGAVVGAVDIGLIIALG
Ga0211622_1036949613300020430MarineMGKIVTDELEERVGGSGITVNSTVKIDTIAEKTSNAGVTIDGVTIKDGAITGSGVVDIGLIIALS
Ga0211539_1015409813300020437MarineIKTDELEERVGSAGITVNSTVKIDTLTEKTTDAGVTIEGVQIKDGTIVTDLGYADIGLVIALG
Ga0211576_1011869313300020438MarineMGKIKTDELEERVGSAGITVNSTVKIDTITEKTSGSGVTIDGLLIKDGVIPSSAVTGAVDIGLVIALG
Ga0211558_1016805623300020439MarineMGKIKTDELEERVGSAGITVNSTVKVDTIAEKTSGSGVTIDGLLIKDGAIPASAVTGGVDIGLVIALG
Ga0211564_1000658363300020445MarineLGKIKTDELEERVGSAGITVNSTVKIDTITEKTTNAGVTIEGVTLKDGAVVGAVDIGLIIALG
Ga0211473_1043332513300020451MarineMGKIVTDELEERVGSAGVTVNSTMKIDTIAEKTSANGVTIDGVNIKDGGITTDLGY
Ga0211545_1025161823300020452MarineLGKIKTDELEERVGSAGITVNSTVKVDTITEKTSNAGVTIEGVTLKDGAVVGAVDIGLVIALG
Ga0211643_1029724233300020457MarineRVGSAGITVNSTVKIDTITEKTTDAGVTIEGVTLKDGAVVGAVDIGLVIALG
Ga0211643_1044337423300020457MarineMGKIKTDELEERVGSAGITVNSTVKVDTITEKTSNAGVTIEGVTLKDGAVVG
Ga0211514_1007137523300020459MarineMGKIKTDELEERVGSAGITVNSTVKIDTITEKTSNAGVTIEGVTLKDGAIVGAVDIGLVIALG
Ga0211486_1044011313300020460MarineKNYSVQGEIMGKIVTDELEERVGSAGVTVNSTMKIDTIAEKTSGSGVTIDGLNIKDGAVAGAVDIGLVIALG
Ga0211546_1065509623300020462MarineEERVGSAGITVNSTVKVDTITEKTSNAGVTIEGVTLKDGAVVGAVDIGLVIALG
Ga0211694_1004965013300020464MarineMGKIVTDELEERVGSAGITVNSTVKVDTIAEKTSANGVTIDGVKLKDSIVVVDTINESSSAAGV
Ga0211640_10003135123300020465MarineMGKIVTDELEERVGSAGVTVNSTMKIDTIAEKTSANGVTIDGLLIKDGAIPSSGVTGAVDIGLVIALG
Ga0211543_1022337633300020470MarineMGKIVTDEIEERVGSSGVQCNSTLKVDTIAEKTSAGGVTIDGVLIKDGAVAGTADIGLVIALG
Ga0211543_1056644623300020470MarineMGKIVTDELEERVGGSGITVNSTVKIDTIAEKTSNAGVTIDGVTLKDGAITGSGVV
Ga0211503_1007421963300020478MarineMGKIVTDELEERVSNSGVQCNSTLKVDTIAEKTSAGGVTIDGVLIKDGAVAGTADIGLVIALG
Ga0211503_1014403113300020478MarineMGKIVTDEIEERVGSSGVQCNSTFKVDTIAEKTSAGGVTIDGVLIKDGAVAGTADIGLVIALG
Ga0211503_1040498223300020478MarineMGKIVTDELEERVSGSGVTVNSTVKIDTIAEKTSANGVTIDGVNIKDGGITTDLGYADIGLVIA
Ga0206123_1015358833300021365SeawaterMGKIKTDELEERVGSAGITVNSTVKIDTMNEKTTDAGVTIEGVQIKDGTIVTDLGYADIGLVIALG
Ga0213860_10004582103300021368SeawaterMGKIKTDELEERVGSAGITVNSTVKVDTITEKTSDAGVTIEGVTLKDGAVVGAVDIGLIIALG
Ga0213868_1063109923300021389SeawaterMGKIKTDELEERVGSAGITVNSTVKIDTMTEKTTDAGVTIEGVQIKDGTIVTDLGYADIGLVIALG
Ga0222718_1038127433300021958Estuarine WaterMGKIKTDELEERVGSAGITVNSTVKIDTMTEKTADAGVTIEGVQIKDGTIVTDLGYADIGLVIALG
Ga0224906_1000495133300022074SeawaterMGKIKTDELEERVGSAGITVNSTVKVDTMTEKTTDAGVTIEGVQIKDGTIVTDLGYADIGLVIALG
Ga0224906_119572223300022074SeawaterMGKIKTDELEERVGSAGITVNSTVKIDTITEKTSNAGVTIEGVTLKDGSIVGAVDIGLVIALG
Ga0244775_1103401413300024346EstuarineVGSAGITVNSTVKIDTMTEKTTDAGVTIEGVQIKDGTIVTDLGYADIGLVIALG
Ga0209193_107991433300025816Pelagic MarineSAGITVNSTVKIDTMNEKTTDAGVTIEGVQIKDGTIVTDLGYADIGLVIALG
Ga0209631_1035642413300025890Pelagic MarineINLMGKIKTDELEERVGSAGITVNSTVKIDTMNEKTTDAGVTIEGVQIKDGTIVTDLGYADIGLVIALG
Ga0208815_102643423300026134Marine OceanicMGKIKTDELEERVGSAGITVNSTVKIDTITEKTSNAGVTIEGVTLKDGAVVGAVDIGLVIALG
Ga0247607_107434513300026447SeawaterNLMGKIKTDELEERVGSAGITVNSTVKIDTMTEKTTDAGVTIEGVQIKDGTIVTDLGYADIGLVIALG
Ga0247578_109681813300026458SeawaterKIKTDELEERVGSAGITVNSTVKIDTMTEKTTDAGVTIEGVQIKDGTIVTDLGYADIGLVIALG
Ga0247568_108098213300026462SeawaterKTDELEERVGSAGITVNSTVKIDTMTEKTTDAGVTIEGVQIKDGTIVTDLGYADIGLVIALG
Ga0247588_108471533300026465SeawaterGSAGITVNSTVKIDTITEKTSNAGVTIEGVTLKDGSIVGAVDIGLVIALG
Ga0247588_109301113300026465SeawaterIKTDELEERVGSAGITVNSTVKIDTMTEKTTDAGVTIEGVQIKDGTIVTDLGYADIGLVIALG
Ga0247599_112594223300026470SeawaterERVGSAGITVNSTVKIDTMTEKTTDAGVTIEGVQIKDGTIVTDLGYADIGLVIALG
Ga0247571_114198313300026495SeawaterELEERVGSAGITVNSTVKIDTMTEKTTDAGVTIEGVQIKDGTIVTDLGYADIGLVIALG
Ga0247592_117083713300026500SeawaterGKIKTDELEERVGSAGITVNSTVKIDTITEKTSNAGVTIEGVTLKDGSIVGAVDIGLVIALG
Ga0209404_1023711323300027906MarineMGKIKTDELEERVGSAGITVNSTVKVDTIAEKTSGSGVTIDGLLIKDGAIPASAVTGAVDIGLVIALG
Ga0247582_116891113300028109SeawaterEERVGSAGITVNSTVKIDTMTEKTTDAGVTIEGVQIKDGTIVTDLGYADIGLVIALG
Ga0257110_1001533173300028197MarineMGKIKTDELEERVGSAGITVNSTVKIDTITEKTSNAGVTIEGVTLKDGSIVGSVDIGLVIALG
Ga0256413_124521613300028282SeawaterKIKTDELEERVGSAGITVNSTVKIDTITEKTSNAGVTIEGVTLKDGSIVGAVDIGLVIAL
Ga0247572_115206513300028290SeawaterLMGKIKTDELEERVGSAGITVNSTVKIDTMTEKTTDAGVTIEGVQIKDGTIVTDLGYADIGLVIALG
Ga0183748_1004437123300029319MarineMGKIVTDELEERVSSAGVTVNSTMKIDTIAEKTSANGVTIDGLLIKDGAIPASGVTGAVDIGLVIALG
Ga0315320_1029188833300031851SeawaterMGKIKTDELEERVGSAGITVNSTVKIDTITEKTSGSGVTIDGLLIKDGAIPSSAVTGAVDIGLVIALG
Ga0315315_1077088323300032073SeawaterMGKIKTDELEERVGSAGITVNSTVKVDTMTEKTTDAGVTIEGVQIKDATIVTDLGYADIGLVIALG

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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