NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F073544

Metagenome / Metatranscriptome Family F073544

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F073544
Family Type Metagenome / Metatranscriptome
Number of Sequences 120
Average Sequence Length 65 residues
Representative Sequence VREYYEVIKIVFIHAERLYGSVESLGLYASKVKYQKDGIEIEEVLENDEFTIMDEIVFEHVEESN
Number of Associated Samples 89
Number of Associated Scaffolds 120

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 87.50 %
% of genes near scaffold ends (potentially truncated) 14.17 %
% of genes from short scaffolds (< 2000 bps) 68.33 %
Associated GOLD sequencing projects 83
AlphaFold2 3D model prediction Yes
3D model pTM-score0.72

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (75.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake
(19.167 % of family members)
Environment Ontology (ENVO) Unclassified
(52.500 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Water (non-saline)
(68.333 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 3.23%    β-sheet: 51.61%    Coil/Unstructured: 45.16%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.72
Powered by PDBe Molstar

Structural matches with SCOPe domains

SCOP familySCOP domainRepresentative PDBTM-score
b.34.1.3: Transcriptional repressor protein KorBd1igqa_1igq0.65072
b.34.2.0: automated matchesd2egca12egc0.6379
b.34.17.1: YccV-liked5ycqa_5ycq0.62329
b.34.4.4: Nitrile hydratase beta chaind3hhtb_3hht0.61727
d.3.1.14: Phytochelatin synthased6thoa16tho0.61708

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 120 Family Scaffolds
PF02467Whib 38.33
PF00085Thioredoxin 7.50
PF00082Peptidase_S8 5.00
PF05257CHAP 1.67
PF00154RecA 0.83
PF00296Bac_luciferase 0.83
PF04586Peptidase_S78 0.83
PF00210Ferritin 0.83

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 120 Family Scaffolds
COG0468RecA/RadA recombinaseReplication, recombination and repair [L] 0.83
COG2141Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)Coenzyme transport and metabolism [H] 0.83
COG3740Phage head maturation proteaseMobilome: prophages, transposons [X] 0.83

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms78.33 %
UnclassifiedrootN/A21.67 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000736|JGI12547J11936_1012976All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium2111Open in IMG/M
3300000756|JGI12421J11937_10036242All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium1719Open in IMG/M
3300000756|JGI12421J11937_10083329All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium918Open in IMG/M
3300000882|FwDRAFT_10100326Not Available938Open in IMG/M
3300000929|NpDRAFT_10127235All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium860Open in IMG/M
3300002297|B570J29603_103454All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium1115Open in IMG/M
3300002835|B570J40625_100013100Not Available14792Open in IMG/M
3300002835|B570J40625_100216901All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium2046Open in IMG/M
3300003413|JGI25922J50271_10000794Not Available9303Open in IMG/M
3300003413|JGI25922J50271_10126673All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium537Open in IMG/M
3300003430|JGI25921J50272_10035477All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium1209Open in IMG/M
3300004125|Ga0066182_10018986All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium1396Open in IMG/M
3300005517|Ga0070374_10244783All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium918Open in IMG/M
3300005517|Ga0070374_10306818All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium805Open in IMG/M
3300005582|Ga0049080_10282744All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium537Open in IMG/M
3300005583|Ga0049085_10320018Not Available503Open in IMG/M
3300005584|Ga0049082_10006785All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium3829Open in IMG/M
3300005584|Ga0049082_10043536All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium1572Open in IMG/M
3300005662|Ga0078894_10028276All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium4602Open in IMG/M
3300005662|Ga0078894_10040197Not Available3910Open in IMG/M
3300005662|Ga0078894_10041719All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium3845Open in IMG/M
3300005662|Ga0078894_10184530All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium1885Open in IMG/M
3300005662|Ga0078894_10773005Not Available842Open in IMG/M
3300005662|Ga0078894_11308070Not Available609Open in IMG/M
3300005662|Ga0078894_11728174Not Available512Open in IMG/M
3300005941|Ga0070743_10000273Not Available20006Open in IMG/M
3300006484|Ga0070744_10124778All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium741Open in IMG/M
3300006484|Ga0070744_10216641All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium543Open in IMG/M
3300006484|Ga0070744_10219593Not Available539Open in IMG/M
3300006875|Ga0075473_10138443All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium975Open in IMG/M
3300007545|Ga0102873_1005049All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium4116Open in IMG/M
3300007559|Ga0102828_1154110All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium577Open in IMG/M
3300007593|Ga0102918_1056319All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium1135Open in IMG/M
3300007632|Ga0102894_1201932All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium528Open in IMG/M
3300007653|Ga0102868_1016339All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium1547Open in IMG/M
3300008052|Ga0102893_1206838All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium567Open in IMG/M
3300008055|Ga0108970_10125766All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium2429Open in IMG/M
3300008055|Ga0108970_11031971All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium1975Open in IMG/M
3300008107|Ga0114340_1008022Not Available9771Open in IMG/M
3300008107|Ga0114340_1017537All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium3410Open in IMG/M
3300008107|Ga0114340_1026852All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium2663Open in IMG/M
3300008107|Ga0114340_1139419All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium910Open in IMG/M
3300008110|Ga0114343_1039023All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium1914Open in IMG/M
3300008111|Ga0114344_1000847Not Available28581Open in IMG/M
3300008113|Ga0114346_1030232All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium2843Open in IMG/M
3300008113|Ga0114346_1158757All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium956Open in IMG/M
3300008950|Ga0102891_1251855Not Available503Open in IMG/M
3300008953|Ga0104241_1003618All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium1121Open in IMG/M
3300008962|Ga0104242_1020453All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium1147Open in IMG/M
3300008996|Ga0102831_1226004Not Available618Open in IMG/M
3300009154|Ga0114963_10249038All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium1008Open in IMG/M
3300009155|Ga0114968_10014215All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium5625Open in IMG/M
3300009155|Ga0114968_10175275All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium1257Open in IMG/M
3300009159|Ga0114978_10642816All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium610Open in IMG/M
3300009160|Ga0114981_10521183All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium635Open in IMG/M
3300009183|Ga0114974_10196930All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium1232Open in IMG/M
3300009187|Ga0114972_10025249Not Available4217Open in IMG/M
3300009419|Ga0114982_1044744All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium1405Open in IMG/M
3300010312|Ga0102883_1123093All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium746Open in IMG/M
3300010354|Ga0129333_10127273All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium2344Open in IMG/M
3300012006|Ga0119955_1084474All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium918Open in IMG/M
3300012663|Ga0157203_1034385Not Available704Open in IMG/M
(restricted) 3300013131|Ga0172373_10096347All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium2255Open in IMG/M
3300013372|Ga0177922_10980893Not Available663Open in IMG/M
3300014050|Ga0119952_1031720All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium1604Open in IMG/M
3300014819|Ga0119954_1039389All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium850Open in IMG/M
3300017778|Ga0181349_1123484All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium952Open in IMG/M
3300017788|Ga0169931_10059860All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium3982Open in IMG/M
3300019784|Ga0181359_1077959All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium1246Open in IMG/M
3300019784|Ga0181359_1079733All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium1229Open in IMG/M
3300020048|Ga0207193_1034654Not Available5702Open in IMG/M
3300020151|Ga0211736_10839386All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium810Open in IMG/M
3300020159|Ga0211734_10653214All Organisms → Viruses → Predicted Viral1962Open in IMG/M
3300020172|Ga0211729_10459154All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium955Open in IMG/M
3300020172|Ga0211729_10678843All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium4757Open in IMG/M
3300020179|Ga0194134_10232853Not Available767Open in IMG/M
3300020483|Ga0207418_100423Not Available6875Open in IMG/M
3300021600|Ga0194059_1147724All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium718Open in IMG/M
3300021602|Ga0194060_10130715All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium1352Open in IMG/M
3300021963|Ga0222712_10572830All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium656Open in IMG/M
3300022407|Ga0181351_1164407All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium783Open in IMG/M
3300022748|Ga0228702_1035926All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium1446Open in IMG/M
3300022752|Ga0214917_10000099All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes95645Open in IMG/M
3300023174|Ga0214921_10001452All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes40427Open in IMG/M
3300023174|Ga0214921_10026028All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium5952Open in IMG/M
3300023174|Ga0214921_10032386All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium5069Open in IMG/M
3300023174|Ga0214921_10097523All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium2225Open in IMG/M
3300023174|Ga0214921_10123667All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium1848Open in IMG/M
3300023184|Ga0214919_10083595All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium2803Open in IMG/M
3300024343|Ga0244777_10000080All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes71570Open in IMG/M
3300024343|Ga0244777_10436438All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium811Open in IMG/M
3300024346|Ga0244775_10057928All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium3353Open in IMG/M
3300024346|Ga0244775_10364623All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium1191Open in IMG/M
3300024346|Ga0244775_10459062All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium1043Open in IMG/M
3300024348|Ga0244776_10035629All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium3978Open in IMG/M
3300026459|Ga0255170_1088380All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium514Open in IMG/M
3300027121|Ga0255074_1002804All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium2523Open in IMG/M
3300027186|Ga0208797_1051160All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium520Open in IMG/M
3300027193|Ga0208800_1022830All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium829Open in IMG/M
3300027246|Ga0208931_1026257All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium1184Open in IMG/M
3300027294|Ga0208441_1081902Not Available663Open in IMG/M
3300027304|Ga0208810_1059665Not Available823Open in IMG/M
3300027586|Ga0208966_1036750All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium1422Open in IMG/M
3300027586|Ga0208966_1154040Not Available607Open in IMG/M
3300027644|Ga0209356_1057854All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium1195Open in IMG/M
3300027689|Ga0209551_1031964All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium1768Open in IMG/M
3300027689|Ga0209551_1231358Not Available558Open in IMG/M
3300027708|Ga0209188_1004481All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium9207Open in IMG/M
3300027754|Ga0209596_1006293All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium8607Open in IMG/M
3300027756|Ga0209444_10226620All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium662Open in IMG/M
3300027759|Ga0209296_1136412All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium1120Open in IMG/M
3300027770|Ga0209086_10151478All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium1120Open in IMG/M
3300027797|Ga0209107_10015091All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium4393Open in IMG/M
3300027892|Ga0209550_10586119Not Available656Open in IMG/M
3300027892|Ga0209550_10653983All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium611Open in IMG/M
3300029930|Ga0119944_1000235Not Available9850Open in IMG/M
3300031784|Ga0315899_10928992All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium781Open in IMG/M
3300031951|Ga0315904_10942169All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium692Open in IMG/M
3300034073|Ga0310130_0270882All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium537Open in IMG/M
3300034106|Ga0335036_0788067All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium552Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake19.17%
EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine14.17%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake9.17%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater8.33%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater8.33%
Freshwater, PlanktonEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton6.67%
EstuarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine5.83%
Freshwater LenticEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic5.00%
FreshwaterEnvironmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater3.33%
Freshwater And SedimentEnvironmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater And Sediment2.50%
Anoxic Zone FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater1.67%
FreshwaterEnvironmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater1.67%
FreshwaterEnvironmental → Aquatic → Freshwater → River → Unclassified → Freshwater1.67%
EstuaryHost-Associated → Plants → Leaf → Unclassified → Unclassified → Estuary1.67%
Freshwater And SedimentEnvironmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater And Sediment0.83%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake0.83%
Freshwater Lake SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Lake Sediment0.83%
FreshwaterEnvironmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater0.83%
Freshwater And MarineEnvironmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater And Marine0.83%
AquaticEnvironmental → Aquatic → Freshwater → Drinking Water → Unclassified → Aquatic0.83%
FreshwaterEnvironmental → Aquatic → Freshwater → Creek → Unclassified → Freshwater0.83%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous0.83%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient0.83%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water0.83%
Freshwater And MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Freshwater And Marine0.83%
Deep SubsurfaceEnvironmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface0.83%
Fracking WaterEnvironmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Fracking Water0.83%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000736Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB epilimnion July 2011EnvironmentalOpen in IMG/M
3300000756Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB hypolimnion July 2011EnvironmentalOpen in IMG/M
3300000882Freshwater microbial communities from the Columbia RiverEnvironmentalOpen in IMG/M
3300000929Marine plume microbial communities from the Columbia River - 15 PSUEnvironmentalOpen in IMG/M
3300002297Freshwater microbial communities from Lake Mendota, WI - 17AUG2012 deep hole epilimnionEnvironmentalOpen in IMG/M
3300002835Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)EnvironmentalOpen in IMG/M
3300003413Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.DDEnvironmentalOpen in IMG/M
3300003430Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SDEnvironmentalOpen in IMG/M
3300004125Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM110.SD (version 2)EnvironmentalOpen in IMG/M
3300005517Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (version 4)EnvironmentalOpen in IMG/M
3300005582Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRFEnvironmentalOpen in IMG/M
3300005583Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG SU08MSRFEnvironmentalOpen in IMG/M
3300005584Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG HU45MSRFEnvironmentalOpen in IMG/M
3300005662Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 4)EnvironmentalOpen in IMG/M
3300005941Estuarine microbial communities from the Columbia River estuary, USA - metaG S.697EnvironmentalOpen in IMG/M
3300006484Estuarine microbial communities from the Columbia River estuary, USA - metaG S.535EnvironmentalOpen in IMG/M
3300006875Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_N_>0.8_DNAEnvironmentalOpen in IMG/M
3300007545Estuarine microbial communities from the Columbia River estuary - metaG 1547B-3EnvironmentalOpen in IMG/M
3300007559Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.541EnvironmentalOpen in IMG/M
3300007593Estuarine microbial communities from the Columbia River estuary - metaG 1563A-3EnvironmentalOpen in IMG/M
3300007632Estuarine microbial communities from the Columbia River estuary - metaG 1554A-3EnvironmentalOpen in IMG/M
3300007653Estuarine microbial communities from the Columbia River estuary - metaG 1546C-3EnvironmentalOpen in IMG/M
3300008052Estuarine microbial communities from the Columbia River estuary - metaG 1553A-02EnvironmentalOpen in IMG/M
3300008055Metatranscriptomes of the Eelgrass leaves and roots. Combined Assembly of Gp0128390, Gp0128391, Gp0128392, and Gp0128393Host-AssociatedOpen in IMG/M
3300008107Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0046-3-NAEnvironmentalOpen in IMG/M
3300008110Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0048-3-NAEnvironmentalOpen in IMG/M
3300008111Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample E2014-0050-C-NAEnvironmentalOpen in IMG/M
3300008113Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample E2014-0050-3-NAEnvironmentalOpen in IMG/M
3300008950Estuarine microbial communities from the Columbia River estuary - metaG 1552A-02EnvironmentalOpen in IMG/M
3300008953Freshwater microbial communities from Lake Lanier in Georgia, USA - LL_1007_MT4EnvironmentalOpen in IMG/M
3300008962Freshwater microbial communities from Lake Lanier in Georgia, USA - LL_1007_MT5EnvironmentalOpen in IMG/M
3300008996Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.747EnvironmentalOpen in IMG/M
3300009154Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_EF_MetaGEnvironmentalOpen in IMG/M
3300009155Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_EF_MetaGEnvironmentalOpen in IMG/M
3300009159Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaGEnvironmentalOpen in IMG/M
3300009160Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_MF_MetaGEnvironmentalOpen in IMG/M
3300009183Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaGEnvironmentalOpen in IMG/M
3300009187Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_EF_MetaGEnvironmentalOpen in IMG/M
3300009419Subsurface microbial communities from deep shales in Ohio, USA - Utica-3 well 1 S input2 FTEnvironmentalOpen in IMG/M
3300010312Estuarine microbial communities from the Columbia River estuary - metaG 1549B-02EnvironmentalOpen in IMG/M
3300010354Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_DNAEnvironmentalOpen in IMG/M
3300012006Freshwater microbial communities from Lake Lanier in Georgia, USA - LL_1101BEnvironmentalOpen in IMG/M
3300012663Freshwater microbial communities from Indian River, Ontario, Canada - S50EnvironmentalOpen in IMG/M
3300013131 (restricted)Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_092012_10mEnvironmentalOpen in IMG/M
3300013372Freshwater microbial communities from Lake Erie, Ontario, Canada. Combined Assembly of 10 SPsEnvironmentalOpen in IMG/M
3300014050Freshwater microbial communities from Lake Lanier in Georgia, USA - LL_1007BEnvironmentalOpen in IMG/M
3300014819Freshwater microbial communities from Lake Lanier in Georgia, USA - LL_1011AEnvironmentalOpen in IMG/M
3300017778Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.S.DEnvironmentalOpen in IMG/M
3300017788Freshwater microbial communities from Lake Kivu, Western Province, Rwanda to study Microbial Dark Matter (Phase II) - Kivu_15m_20LEnvironmentalOpen in IMG/M
3300019784Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.DEnvironmentalOpen in IMG/M
3300020048Microbial communities from Manganika and McQuade lakes, Minnesota, USA Combined Assembly of Gp0225457, Gp0225456, Gp0225455, Gp0225454, Gp0225453, Gp0224915EnvironmentalOpen in IMG/M
3300020151Freshwater lake microbial communities from Lake Erken, Sweden - P4710_202 megahit1EnvironmentalOpen in IMG/M
3300020159Freshwater lake microbial communities from Lake Erken, Sweden - P4710_108 megahit1EnvironmentalOpen in IMG/M
3300020172Freshwater lake microbial communities from Lake Erken, Sweden - P4710_102 megahit1EnvironmentalOpen in IMG/M
3300020179Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015056 Kigoma Offshore 0mEnvironmentalOpen in IMG/M
3300020483Freshwater microbial communities from Lake Mendota, WI - 05AUG2008 deep hole epilimnion (SPAdes)EnvironmentalOpen in IMG/M
3300021600Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Sep2016-L626-11mEnvironmentalOpen in IMG/M
3300021602Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Sep2016-L222-5mEnvironmentalOpen in IMG/M
3300021963Estuarine water microbial communities from San Francisco Bay, California, United States - C33_657DEnvironmentalOpen in IMG/M
3300022407Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.S.DEnvironmentalOpen in IMG/M
3300022748Freshwater microbial communities from McNutts Creek, Athens, Georgia, United States - 20-17_Aug_MGEnvironmentalOpen in IMG/M
3300022752Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL_1208_BBEnvironmentalOpen in IMG/M
3300023174Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1505EnvironmentalOpen in IMG/M
3300023184Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1503EnvironmentalOpen in IMG/M
3300024343Combined assembly of estuarine microbial communities from Columbia River, Washington, USA >3um size fractionEnvironmentalOpen in IMG/M
3300024346Whole water sample coassemblyEnvironmentalOpen in IMG/M
33000243480.2um to 3um size fraction coassemblyEnvironmentalOpen in IMG/M
3300026459Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Yuk_RepA_8dEnvironmentalOpen in IMG/M
3300027121Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Yuk_RepC_8hEnvironmentalOpen in IMG/M
3300027186Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.555 (SPAdes)EnvironmentalOpen in IMG/M
3300027193Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.541 (SPAdes)EnvironmentalOpen in IMG/M
3300027246Estuarine microbial communities from the Columbia River estuary - metaG 1555B-02 (SPAdes)EnvironmentalOpen in IMG/M
3300027294Estuarine microbial communities from the Columbia River estuary - metaG 1548B-02 (SPAdes)EnvironmentalOpen in IMG/M
3300027304Estuarine microbial communities from the Columbia River estuary - metaG 1560A-02 (SPAdes)EnvironmentalOpen in IMG/M
3300027586Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG HU45MSRF (SPAdes)EnvironmentalOpen in IMG/M
3300027644Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.SN (SPAdes)EnvironmentalOpen in IMG/M
3300027689Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SD (SPAdes)EnvironmentalOpen in IMG/M
3300027708Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027754Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_MF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027756Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.DN (SPAdes)EnvironmentalOpen in IMG/M
3300027759Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027770Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130207_XF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027797Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB hypolimnion July 2011 (SPAdes)EnvironmentalOpen in IMG/M
3300027892Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (SPAdes)EnvironmentalOpen in IMG/M
3300029930Aquatic microbial communities from drinking water treatment plant in Pearl River Delta area, China - influent_20120727EnvironmentalOpen in IMG/M
3300031784Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA112EnvironmentalOpen in IMG/M
3300031951Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA120EnvironmentalOpen in IMG/M
3300034073Fracking water microbial communities from deep shales in Oklahoma, United States - MC-6-XLEnvironmentalOpen in IMG/M
3300034106Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME23Aug2013-rr0131EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
JGI12547J11936_101297663300000736Freshwater And SedimentMQKDYMDQSKAVFIHAERLYGSVESLGIYASKVKYQKDGIEIEEVLENDEFTIMDEIIFEHEEESN*
JGI12421J11937_1003624273300000756Freshwater And SedimentVREYYEVIKIVFIHAERLYGSIESLGIYASKVKYQKDGIEIEEVLENDEFTIMDEIVFEHVEGSN*
JGI12421J11937_1008332923300000756Freshwater And SedimentVREYYEVIKIVFIHAERLYGSVESLGIYASKVKYQKDGIEIEEVLENDEFTIMDEIVFEHEEESN*
FwDRAFT_1010032643300000882Freshwater And MarineEYYEVINIVFIHEERLWGTCDSLGLYASKIKYQKDGIEYEDMFDNEEFTVMEEIVLEHSEEEN*
NpDRAFT_1012723523300000929Freshwater And MarineLKGYQVREYYEVINIVFIHEERLWGTCDSLGLYASKIKYQKDGIEYEDMFDNEEFTVMEEIVLEHSEEEN*
B570J29603_10345413300002297FreshwaterFVHKEGVYGSCEKLGAFASNVRYAKDGIEYEVILENDEFSIMDEIVFEHVEEEN*
B570J40625_100013100113300002835FreshwaterVREYYEVIKIVFIHSERVYGSVESLGLYASKVRYQKDGIEIEEVLENDEFTVMDEIIFEHEEESN*
B570J40625_10021690123300002835FreshwaterVREYYEVIKVVFIHAERVYGSVESLGIYASKVKYQKDGIEIEEVLENDEFTVMDEIVFEHIEESN*
JGI25922J50271_10000794113300003413Freshwater LakeVREYYEVINIVFIHELRLWGTCESLGLYASKIKYQKDGIEYEDMFDNEEFTVMEEIVLEHAEEDN*
JGI25922J50271_1012667323300003413Freshwater LakeVLEYYEVIKIVFIHAERLXGSVESLGXYASKVKYQKDGIEIEEVLENDEFTIMDEIIFEHVEGSN*
JGI25921J50272_1003547713300003430Freshwater LakeLKGCQVREYYEVINIVFIHELRLWGTCESLGLYASKIKYQKDGIEYEDMFDNEEFTVMEEIVLEHQEEEN*
Ga0066182_1001898663300004125Freshwater LakeVREYYEVINIVFIHELRLWGTCDSLGLYASKIKYQKDGIEYEDMFDNEEFTVMEEIVLEHLEEDN*
Ga0070374_1024478333300005517Freshwater LakeVREYYEVIKVVFIHAERVYGSVESLGIYASKVKYQKDGIEIEEVLENDEFTIMDEIVFEHIEESN*
Ga0070374_1030681823300005517Freshwater LakeVREYYEVINIVFIHEQRLWGTCDSLGLYASKIKYQKDGIEYEEMLDNEEFTVMEEIVIEHQEEDN*
Ga0049080_1028274423300005582Freshwater LenticVKKYYEVVNVVFLHQDRIYGSVESLGLYASKVKYIKNGVEVEEVLENDEFTVMDEIVFEHIEEEN*
Ga0049085_1032001813300005583Freshwater LenticVKRYYETISIVFIHKDRLFGSAEKLGIYATVVKYQKDGIEYEETLENEEFSVMNEIVFDHIEESD*
Ga0049082_1000678583300005584Freshwater LenticVREYYEVIKVVFIHAERVYGSIESLGIYASKVKYQKDGIEIEEVLENDEFTIMDEIVFEHIEESN*
Ga0049082_1004353633300005584Freshwater LenticVKRYYETISIVFIHKDRIFGSAEKLGIYATVVKYQKDGIEYEETLENEEFSVMNEIVFDHIEESD*
Ga0078894_1002827653300005662Freshwater LakeVREYYEVINIVFIHELRLWGTCESLGLYASKIKYQKDGIEYEDMFDNEEFTVMEEIVLEHQEEEN*
Ga0078894_10040197113300005662Freshwater LakeVLEYYEVIKIVFIHAERLYGSVESLGLYASKVKYQKDGIEIEEVLENDEFTIMDEIIFEHVEGSN*
Ga0078894_1004171923300005662Freshwater LakeVLEYYEVIKIVFIHAERLYGSVESLGLYASKVKYQKDGIEIEEVLENDEFTIMDEIIFEHVEESN*
Ga0078894_1018453013300005662Freshwater LakeLKGCQVREYYEVINIVFIHEGRLWGTCESLGLYASKIKYQKDGIEYEEMFDNEEFTVMEEIVIEHLEEEN*
Ga0078894_1077300533300005662Freshwater LakeVREYYEVINIVFIHEGRLWGTCESLGLYASKIKYQKDGIEYEEMFDNEEFTVMEEIVIEHQEEDK*
Ga0078894_1130807033300005662Freshwater LakeVKRYYETVNVVFIHSERTHGTVESLGLYASKVRYKKGDVEVEEVLENDDFTIMDEIVFEHIEEDN*
Ga0078894_1172817423300005662Freshwater LakeVREYYEVINIVFIHELRLWGTCDSLGLYASKIKYQKDGIEYEDMFDNEEFTVMEEIVLEHSEEEN*
Ga0070743_10000273253300005941EstuarineVREYYEVINIVFIHEERLWGTCDSLGLYASKIKYQKDGIEYEDMFDNEEFTVMEEIVLEHSEEEN*
Ga0070744_1012477823300006484EstuarineVREYYEVIKIVFIHAERIYGSVESLGIYASKVKYQKDGIEIEEVLENDEFTIMDEIVFEHVEESN*
Ga0070744_1021664123300006484EstuarineVREYYEVIKIVFIHAERLYGSVESLGLYASKVKYQKDGIEIEEVLENDEFTIMDEIVFEHVEESN*
Ga0070744_1021959323300006484EstuarineVREYYEVIKIVFIHAERIYGSVESLGIYASKVKYQKDGIEIEEVLENDEFTIMDEIVFEHIEESN*
Ga0075473_1013844333300006875AqueousVREYYEVIKIVFIHAERVYGSVESLGLYASKVRYQKDGIEVEEVLENDEFTIMDEIVFEHVEESN*
Ga0102873_100504993300007545EstuarineVREYYEVINIVFIHELRLWGTCDSLGLYASKIKYQKDGIEYEEMLDNEEFTVMEEIVIEHQEEDN*
Ga0102828_115411023300007559EstuarineVREYYEIIKIVFIHAERLYGSVESLGLYASKVKYQKDGIEIEEVLENDEFTIMDEIVFEHVEESN*
Ga0102918_105631913300007593EstuarineVREYYEVINIVFIHEERLWGTCDSLGLYASKIKYQKDGIEYEDMFDNEEFTVMEEIVIEHQEEDN*
Ga0102894_120193223300007632EstuarineVREYYEVIKVVFIHAERVYGSVESLGIYASKVKYQKDGIEIEEVLENDEFTIMDEIVFEHVEESN*
Ga0102868_101633923300007653EstuarineVREYYEVINIVFIHELRLWGTCDSLGLYASKIKYQKDGIEYEEMLDNEEFTVMEVIVIEHQEEDN*
Ga0102893_120683823300008052EstuarineVREYYEVIKVVSIHAERVYGSVESLGIYASKVKYQKDGIEIEEVLENDEFTIMDEIVFEHIEESN*
Ga0108970_1012576643300008055EstuaryVREYYEVINIVFIHELRLWGTCDLLGLYASKIKYQKDGIEYEDMFDNEEFTVMEEIVLEHAEEDN*
Ga0108970_1103197123300008055EstuaryVKRYYEVVNVVFIHSERTHGTVESLGLYASKVKYIKDGVEVEEVLENDDFTIMDEIVFEHIEEDN*
Ga0114340_1008022153300008107Freshwater, PlanktonVREYYEVIKIVFIHAERLYGSVESLGIYASKVKYQKDGIEIEEVLENDEFTIMDEIIFEHEEESN*
Ga0114340_101753793300008107Freshwater, PlanktonVKKYYDTVSVVFLHHERIYGTTESLGLYATKIKYMKDGKQVEETFSNEDFTVMDEIVFEHIEEEN*
Ga0114340_102685263300008107Freshwater, PlanktonVKEYYDIVNVVFIHSERLYGTVESLGLYASKIKYQKDGIEYEEVFDNEEFTVMEEIVFEHVEEEN*
Ga0114340_113941923300008107Freshwater, PlanktonVREYYEVINIVFIHEGRLWGTCESLGLYASKIKYQKDGIEYEEMFDNEEFTVMEEIVIEHLEEEN*
Ga0114343_103902333300008110Freshwater, PlanktonVREYYEIIKIVFIHSERVYGSVESLGLYASKVKYQKDGIEIEEVLENDEFTIMDEIIFEHVEESN*
Ga0114344_1000847323300008111Freshwater, PlanktonVREYYEVIKIVFIHAERVYGSVESLGLYASKVKYQKDGIEIEEVLENDEFTIMDEIVFEHVEESN*
Ga0114346_103023293300008113Freshwater, PlanktonVREYYEIIKIVFIHSERVYGSVESLGLYASKVKYQKDGIEIEEVIENDDFTVMDEIVFEHIEESE*
Ga0114346_115875733300008113Freshwater, PlanktonVREYYEVINIVFIHEQRLWGTCDSLGLYASKIKYQKDGIEYEEVLDNEEFTVMEEIVIEHQEEEN*
Ga0102891_125185523300008950EstuarineLKGYQVREYYEVINIVFIHEQRLWGTCDSLGLYASKIKYQKDGIEYEEMLDNEEFTVMEEIVIEHQEEDN*
Ga0104241_100361843300008953FreshwaterVREYYEVIKIVFIHAERVYGSVESLGLYASKVRYQKDGIEIEEVLENDEFTVMDEIVFEHVEESN*
Ga0104242_102045343300008962FreshwaterVREYYETINIVFVHELRLWGTCESLGLYASKIKYQKDGIEYEETLDNEEFTVMEEIVIEHLEEEN*
Ga0102831_122600413300008996EstuarineVREYYEIIKIVFIHAERVYGSVESLGLYASKVKYQKDGIEIEEVLENDEFTIMDEIVFEHVEESN*
Ga0114963_1024903843300009154Freshwater LakeVREYYEVIKIVFIHAERIYGSVESLGLYASKVKYQKDGIEIEEVLENDEFTIMDEIVFEHIEESN*
Ga0114968_1001421593300009155Freshwater LakeVREYYEVINIVFIHELRLWGTCESLGLYASKIKYQKDGIEYEDMFDNEEFTVMEEIVLEHSEEDN*
Ga0114968_1017527543300009155Freshwater LakeVREYYEIIKIVFIHAERVYGSIESLGLYASKVKYQKDGIEIEEVLENDEFTIMDEIVFEHVEESN*
Ga0114978_1064281623300009159Freshwater LakeVREYYEVIKIVFIHAERLYGSVESLGLYASKVRYQKDGIEIEEVLENDEFTIMDEIVFEHVEESN*
Ga0114981_1052118313300009160Freshwater LakeVREYYEVIKIVFIHAERLYGSVESLGLYASKVKYQKDGIEIEEVLENDEFTIMD
Ga0114974_1019693033300009183Freshwater LakeVREYYEIIKIVFIHAERVYGSVESLGLYASKVKYQKDGIEIEEVLENDEFTVMDEIVFEHVEGSN*
Ga0114972_1002524913300009187Freshwater LakeYYEVIKIVFIHAERIYGSVESLGIYASKVKYQKDGIEIEEVLENDEFTIMDEIVFEHIEESN*
Ga0114982_104474433300009419Deep SubsurfaceVQEYYEVIKIVFIHAERLYGSVESLGLYASKVKYQKDGIEIEEVLENDEFTIMDEIVFEHTEESN*
Ga0102883_112309323300010312EstuarineVREYYEVIKIVFIHAERLYGSVESLGIYASKVKYQKDGIEIEEVLENDEFTIMDEIVFEHIEESN*
Ga0129333_1012727363300010354Freshwater To Marine Saline GradientVKEYYDIVNIVFIHEERVYGTVETLGLYASKVKYQKDGIEYEEVLDNDEFTVMEEIVFEHVEENS*
Ga0119955_108447433300012006FreshwaterVREYYEVIKIVFIHAERLYGSVESLGLYASKVKYQKDGIEIEEVLENDEFTIMDEIVFEHIEESN*
Ga0157203_103438533300012663FreshwaterKGYQVREYYEVIKIVFIHAERLYGSVESLGLYASKVKYQKDGIEIEEVLENDEFTIMDEIVFEHVEESN*
(restricted) Ga0172373_1009634763300013131FreshwaterVKKYYDLVHIVFIHSERAYGSCESLGLYASKIKYIKDGAEVEEMIDNEDFTVMDEIVFEHVEENN*
Ga0177922_1098089313300013372FreshwaterVFIHAERIYGSVENLGIYASKVKYQKDGIEIEEVLENDEFTIMDEIIFEHEEESN*
Ga0119952_103172013300014050FreshwaterYQVREYYETINIVFVHELRLWGTCESLGLYASKIKYQKDGIEYEETLDNEEFTVMEEIVIEHLEEEN*
Ga0119954_103938923300014819FreshwaterVREYYEVIKIVFIHAERVFGSIESLGLYASKVRYQKDGIEIEEVLENDEFTIMDEIVFEHVEGSN*
Ga0181349_112348443300017778Freshwater LakeIHAERVYGSVESLGIYASKVKYQKDGIEIEEVLENDEFTIMDEIVFEHVEESN
Ga0169931_1005986073300017788FreshwaterVKKYYDLVHIVFIHSERAYGSCESLGLYASKIKYIKDGAEVEEMIDNEDFTVMDEIVFEHVEENN
Ga0181359_107795923300019784Freshwater LakeVREYYEVIKIVFIHAERIYGSVESLGIYASKVKYQKDGIEIEEVLENDEFTIMDEIVFEHVEESN
Ga0181359_107973323300019784Freshwater LakeVREYYEVIKVVFIHAERVYGSVESLGIYASKVKYQKDGIEIEEVLENDEFTIMDEIVFEHIEESN
Ga0207193_1034654113300020048Freshwater Lake SedimentVLEYYEVIKIVFIHAERLYGSVESLGLYASKVKYQKDGIEIEEVLENDEFTIMDEIIFEHVEGSN
Ga0211736_1083938623300020151FreshwaterVREYYEVIKIVFIHAERVYGSVESLGLYASKVKYQKDGIEIEEVLENDEFTIMDEIVFEHVEESN
Ga0211734_1065321453300020159FreshwaterVREYYEVINIVFIHELRLWGTCDSLGLYASKIKYQKDGIEYEDMFDNEEFTVMEEIVLEHQEEEN
Ga0211729_1045915423300020172FreshwaterVREYYEVINIVFIHELRLWGTCDSLGLYASKIKYQKDGIEYEDMFDNEEFTVMEEIVLEHAEEDK
Ga0211729_10678843113300020172FreshwaterVQEYYEVIKIVFIHAERLYGSVESLGLYASKVKYQKDGIEIEEVLENDEFTIMDEIVFEHTEESN
Ga0194134_1023285323300020179Freshwater LakeVKKYYEVVSVVFLHEERLYGTIESLGTYASKVKYKKDGEEIEELVENDDFTVMDEIVFEHIEEDN
Ga0207418_100423113300020483FreshwaterVREYYEVIKIVFIHSERVYGSVESLGLYASKVRYQKDGIEIEEVLENDEFTVMDEIIFEHEEESN
Ga0194059_114772423300021600Anoxic Zone FreshwaterVREYYEIIKIVFIHAERLYGSVESLGLYASKVKYQKDGIEIEEVLENDEFTIMDEIVFEHVEESD
Ga0194060_1013071533300021602Anoxic Zone FreshwaterVREYYEVIKIVFIHAERLYGSVESLGLYASKVKYQKDGIEIEEVLENDEFTIMDEIVFEHVEESN
Ga0222712_1057283023300021963Estuarine WaterVREYYEVIKIVFIHAERLYGSVESLGLYASKVRYQKDGIEIEEVLENDEFTIMDEIVFEHVEESN
Ga0181351_116440713300022407Freshwater LakeVREYYEVINIVFIHELRLWGTCESLGLYASKIKYQKDGIEYEDMFDNEEFTVMEEIVLEHLEEDN
Ga0228702_103592613300022748FreshwaterVREYYEVIKIVFIHAERVYGSIESLGLYASKVRYQKDGIEIEEVLENDEFTVMDEIVFEHVEE
Ga0214917_10000099293300022752FreshwaterVKKYYEVVNVVFIHEERSYGTVEALGTYASKVKYEKDGKEIEEIMENDEFTVMDEIVFEHIEEDN
Ga0214921_10001452553300023174FreshwaterVREYYEIIKIVFIHAERVYGSVESLGLYASKVKYQKDGIEIEEVLENDEFTIMDEIVFEHIEESN
Ga0214921_1002602873300023174FreshwaterVREYYEIIKIVLIHAERTYGSVESLGLYASKVKYQKDGIEIEEVLENDEFTIMDEIVFEHVEESN
Ga0214921_10032386103300023174FreshwaterVREYYEVIKIVFIHAERVYGSVESLGLYASKVRYQKDGIEVEEVLENDEFTIMDEIVFEHVEESN
Ga0214921_1009752363300023174FreshwaterVREYYEVIKIVFIHAERTYGSVESLGLYASKVKYQKDGIEIEEVLENDEFTVMDEIVFEHVEESN
Ga0214921_1012366753300023174FreshwaterVREYYEVIKIVFIHAERVYGSVESLGLYASKVRYQKDGIEIEEVLENDEFTVMDEIVFEHVEESN
Ga0214919_1008359593300023184FreshwaterVREYYEIIKIVFIHAERLYGSVESLGLYASKVKYQKDGIEIEEVLENDEFTIMDEIVFEHVEESN
Ga0244777_10000080813300024343EstuarineVREYYEVINIVFIHELRLWGTCDSLGLYASKIKYQKDGIEYEEMLDNEEFTVMEEIVIEHQEEDN
Ga0244777_1043643823300024343EstuarineVREYYEVINIVFIHEERLWGTCDSLGLYASKIKYQKDGIEYEDMFDNEEFTVMEEIVLEHSEEEN
Ga0244775_1005792823300024346EstuarineVKRYYETISIVFIHKDRLFGSAEKLGIYATVVKYQKDGIEYEETLENEEFSVMNEIVFDHIEESD
Ga0244775_1036462333300024346EstuarineVREYYEVINIVFIHEQRLWGTCDSLGLYASKIKYQKDGIEYEEMLDNEEFTVMEEIVIEHQEEDN
Ga0244775_1045906223300024346EstuarineVREYYEVIKIVFIHAERIYGSVESLGIYASKVKYQKDGIEIEEVLENDEFTIMDEIVFEHIEESN
Ga0244776_1003562953300024348EstuarineVREYYEVIKIVFIHAERLYGSVESLGIYASKVKYQKDGIEIEEVLENDEFTIMDEIVFEHVEESN
Ga0255170_108838023300026459FreshwaterVKKYYEVVSVVFLHQERLYGTIESLGTYASKVKYEKDGKEIEELLENDEFTVMDEIVFEHIEEDN
Ga0255074_100280463300027121FreshwaterVREYYEVINIVFIHELRLWGTCDLLGLYASKIKYQKDGIEYEDMFDNEEFTVMEEIVLEHAEEDN
Ga0208797_105116023300027186EstuarineVREYYEVIKIVFIHAERIYGSVESLGIYASKVKYQKDGIEIEEVLENDEFTIMDEIVFEHIE
Ga0208800_102283033300027193EstuarineVREYYEVIKVVFIHAERVYGSVESLGIYASKVKYQKDGIEIEEVLENDEFTIMDEIVFEHVEESN
Ga0208931_102625713300027246EstuarineVREYYEVINIVFIHELRLWGTCDSLGLYASKIKYQKDGIEYEEMLDNEEFTVMEEIVIE
Ga0208441_108190233300027294EstuarineVREYYEVINIVFIHELRLWGTCDSLGLYASKIKYQKDGIEYEDMFDNEEFTVMEEIVLEHSEEEN
Ga0208810_105966533300027304EstuarineVREYYEVINIVFIHEERLWGTCDSLGLYASKIKYQKDGIEYEEMLDNEEFTVMEEIVIEHQEEDN
Ga0208966_103675033300027586Freshwater LenticVREYYEVIKVVFIHAERVYGSIESLGIYASKVKYQKDGIEIEEVLENDEFTIMDEIVFEHIEESN
Ga0208966_115404033300027586Freshwater LenticVKRYYETISIVFIHKDRIFGSAEKLGIYATVVKYQKDGIEYEETLENEEFSVMNEIVFDHIEESD
Ga0209356_105785433300027644Freshwater LakeVREYYEVINIVFIHELRLWGTCDSLGLYASKIKYQKDGIEYEDMFDNEEFTVMEEIVLEHLEEDN
Ga0209551_103196433300027689Freshwater LakeVREYYEVINIVFIHELRLWGTCDSLGLYASKIKYQKDGIEYEDMFDNEEFTVMEEIVLEHSEEDN
Ga0209551_123135823300027689Freshwater LakeVREYYEVINIVFIHELRLWGTCESLGLYASKIKYQKDGIEYEDMFDNEEFTVMEEIVLEHAEEDN
Ga0209188_100448183300027708Freshwater LakeVREYYEVIKIVFIHAERIYGSVESLGLYASKVKYQKDGIEIEEVLENDEFTIMDEIVFEHIEESN
Ga0209596_1006293113300027754Freshwater LakeVREYYEIIKIVFIHAERVYGSIESLGLYASKVKYQKDGIEIEEVLENDEFTIMDEIVFEHVEESN
Ga0209444_1022662013300027756Freshwater LakeVREYYEVINIVFIHELRLWGTCDSLGLYASKIKYQKDGIEYEDMFDNEEFTVMEEIVLEHLE
Ga0209296_113641233300027759Freshwater LakeVREYYEIIKIVFIHAERVYGSVESLGLYASKVKYQKDGIEIEEVLENDEFTVMDEIVFEHVEGSN
Ga0209086_1015147813300027770Freshwater LakeVREYYEVINIVFIHELRLWGTCESLGLYASKIKYQKDGIEYEDMFDNEEFTVMEEIVLEHSEEDN
Ga0209107_10015091113300027797Freshwater And SedimentVREYYEVIKVVFIHAERVYGSVESLGIYASKVKYQKDGIEIEEVLENDEFTIMDEIVFEHTEESN
Ga0209550_1058611913300027892Freshwater LakeQVREYYEVINIVFIHEQRLWGTCDSLGLYASKIKYQKDGIEYEEVLDNEEFTVMEEIVIEHQEEEN
Ga0209550_1065398313300027892Freshwater LakeVREYYEVIKIVFIHAERLYGSIESLGIYASKVKYQKDGIEIEEVLENDEFTIMDEIVFEHVEESN
Ga0119944_1000235123300029930AquaticVYRVKRYYDIVNIVFLHAERLYGSTESLGLYASKIKYIKDGVEVEELFNNEDFTVMDEIVFEHVEEDNK
Ga0315899_1092899233300031784FreshwaterVREYYEVINIVFIHEGRLWGTCESLGLYASKIKYQKDGIEYEEMFDNEEFTVMEEIVIEHLEEEN
Ga0315904_1094216933300031951FreshwaterVREYYEVIKIVFIHAERVYGSVESLGLYASKVRYQKDGIEIEEVLENDEFTVMDEIIFEHEEESN
Ga0310130_0270882_69_2663300034073Fracking WaterVKKYYDRASVVFIHTERAYGVTESLGLYASKIKYQKDGKEYEAVFDNEDFTVLDEIIFEHVEEEN
Ga0335036_0788067_50_2473300034106FreshwaterVREYYEVIKVVFIHAERVYGSVESLGIYASKVKYQKDGIEIEEVLENDEFTVMDEIVFEHIEESN

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