Metagenome Family F073541

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F073541
Family Type	Metagenome
Number of Sequences	120
Average Sequence Length	65 residues
Representative Sequence	MKKPKMNKMVEICMRNKAFRESYQNMPQDPNTVSVTFLKNKEDKTKDTEIEMFMEWFSNQRFPEEE
Number of Associated Samples	72
Number of Associated Scaffolds	120

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	5.00 %
% of genes near scaffold ends (potentially truncated)	20.83 %
% of genes from short scaffolds (< 2000 bps)	84.17 %
Associated GOLD sequencing projects	66
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.30

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (70.833 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake (24.167 % of family members)
Environment Ontology (ENVO)	Unclassified (52.500 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (68.333 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 32.98% β-sheet: 0.00% Coil/Unstructured: 67.02%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.30
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.30
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 120 Family Scaffolds
PF00004	AAA	2.50
PF13328	HD_4	2.50
PF13588	HSDR_N_2	1.67
PF01223	Endonuclease_NS	0.83
PF12161	HsdM_N	0.83
PF13175	AAA_15	0.83
PF06210	DUF1003	0.83
PF13182	DUF4007	0.83
PF00884	Sulfatase	0.83
PF11074	DUF2779	0.83
PF10117	McrBC	0.83
PF14730	DUF4468	0.83
PF00589	Phage_integrase	0.83
PF00226	DnaJ	0.83

COG ID	Name	Functional Category	% Frequency in 120 Family Scaffolds
COG1864	DNA/RNA endonuclease G, NUC1	Nucleotide transport and metabolism [F]	0.83
COG4420	Uncharacterized membrane protein	Function unknown [S]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.83 %
All Organisms	root	All Organisms	29.17 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.83 %
cellular organisms	root	All Organisms → cellular organisms	29.17 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.83 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	29.17 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.83 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	25.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.83 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	25.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.83 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	25.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.83 %
Chitinophagia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia	7.50 %
Cytophagia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia	6.67 %
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	2.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.83 %
Chitinophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales	7.50 %
Cytophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales	6.67 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	2.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.83 %
Chitinophagaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	7.50 %
Cytophagaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cytophagaceae	5.00 %
Flavobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	2.50 %
Cyclobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cyclobacteriaceae	1.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.83 %
unclassified Chitinophagaceae	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae	6.67 %
Aquirufa	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cytophagaceae → Aquirufa	5.00 %
Algoriphagus	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cyclobacteriaceae → Algoriphagus	1.67 %
Polaribacter	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Polaribacter	1.67 %
Ulvibacter	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Ulvibacter	0.83 %
Chitinophaga	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Chitinophaga	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.83 %
Chitinophagaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	6.67 %
Aquirufa antheringensis	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cytophagaceae → Aquirufa → Aquirufa antheringensis	5.00 %
unclassified Algoriphagus	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cyclobacteriaceae → Algoriphagus → unclassified Algoriphagus	1.67 %
unclassified Polaribacter	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Polaribacter → unclassified Polaribacter	1.67 %
Chitinophaga rupis	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Chitinophaga → Chitinophaga rupis	0.83 %
Ulvibacter antarcticus	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Ulvibacter → Ulvibacter antarcticus	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.83 %
Chitinophagaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	6.67 %
Aquirufa antheringensis	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cytophagaceae → Aquirufa → Aquirufa antheringensis	5.00 %
Polaribacter sp. KT 15	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Polaribacter → unclassified Polaribacter → Polaribacter sp. KT 15	1.67 %
Algoriphagus sp. CAU 1643	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cyclobacteriaceae → Algoriphagus → unclassified Algoriphagus → Algoriphagus sp. CAU 1643	1.67 %
Chitinophaga rupis	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Chitinophaga → Chitinophaga rupis	0.83 %
Ulvibacter antarcticus	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Ulvibacter → Ulvibacter antarcticus	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000756\|JGI12421J11937_10038391	Not Available	1652	Open in IMG/M
3300002408\|B570J29032_109943998	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	4030	Open in IMG/M
3300002835\|B570J40625_100016877	All Organisms → cellular organisms → Bacteria	12674	Open in IMG/M
3300002835\|B570J40625_101331541	Not Available	595	Open in IMG/M
3300002835\|B570J40625_101526479	Not Available	547	Open in IMG/M
3300003404\|JGI25920J50251_10071996	Not Available	848	Open in IMG/M
3300003404\|JGI25920J50251_10144371	Not Available	520	Open in IMG/M
3300004240\|Ga0007787_10092845	Not Available	1402	Open in IMG/M
3300004802\|Ga0007801_10154142	Not Available	655	Open in IMG/M
3300005581\|Ga0049081_10285366	Not Available	572	Open in IMG/M
3300005585\|Ga0049084_10191111	Not Available	702	Open in IMG/M
3300005662\|Ga0078894_10456475	Not Available	1150	Open in IMG/M
3300006484\|Ga0070744_10136898	Not Available	704	Open in IMG/M
3300006484\|Ga0070744_10159988	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cytophagaceae → Aquirufa → Aquirufa antheringensis	645	Open in IMG/M
3300007545\|Ga0102873_1202380	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cytophagaceae → Aquirufa → Aquirufa antheringensis	596	Open in IMG/M
3300007547\|Ga0102875_1120035	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	833	Open in IMG/M
3300007547\|Ga0102875_1152599	Not Available	725	Open in IMG/M
3300007549\|Ga0102879_1268656	Not Available	508	Open in IMG/M
3300007551\|Ga0102881_1225298	Not Available	519	Open in IMG/M
3300007562\|Ga0102915_1221769	Not Available	613	Open in IMG/M
3300007562\|Ga0102915_1292376	Not Available	526	Open in IMG/M
3300007590\|Ga0102917_1212505	Not Available	674	Open in IMG/M
3300007590\|Ga0102917_1331109	Not Available	524	Open in IMG/M
3300007597\|Ga0102919_1287244	Not Available	512	Open in IMG/M
3300007597\|Ga0102919_1292045	Not Available	508	Open in IMG/M
3300007603\|Ga0102921_1342192	Not Available	532	Open in IMG/M
3300007603\|Ga0102921_1358103	Not Available	519	Open in IMG/M
3300007617\|Ga0102897_1187176	Not Available	622	Open in IMG/M
3300007620\|Ga0102871_1225723	Not Available	519	Open in IMG/M
3300007625\|Ga0102870_1091999	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cytophagaceae → Aquirufa → Aquirufa antheringensis	887	Open in IMG/M
3300007625\|Ga0102870_1170803	Not Available	623	Open in IMG/M
3300007632\|Ga0102894_1151801	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cytophagaceae → Aquirufa → Aquirufa antheringensis	614	Open in IMG/M
3300007634\|Ga0102901_1032986	All Organisms → cellular organisms → Bacteria	1501	Open in IMG/M
3300008950\|Ga0102891_1112003	Not Available	819	Open in IMG/M
3300008996\|Ga0102831_1106837	Not Available	931	Open in IMG/M
3300009068\|Ga0114973_10262385	Not Available	929	Open in IMG/M
3300009155\|Ga0114968_10730894	Not Available	517	Open in IMG/M
3300009158\|Ga0114977_10195320	Not Available	1188	Open in IMG/M
3300009158\|Ga0114977_10260886	Not Available	997	Open in IMG/M
3300009158\|Ga0114977_10569420	Not Available	614	Open in IMG/M
3300009158\|Ga0114977_10785367	Not Available	502	Open in IMG/M
3300009159\|Ga0114978_10567177	Not Available	659	Open in IMG/M
3300009161\|Ga0114966_10038913	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Polaribacter → unclassified Polaribacter → Polaribacter sp. KT 15	3446	Open in IMG/M
3300009161\|Ga0114966_10295835	Not Available	981	Open in IMG/M
3300009161\|Ga0114966_10336087	Not Available	902	Open in IMG/M
3300009163\|Ga0114970_10106786	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Polaribacter → unclassified Polaribacter → Polaribacter sp. KT 15	1727	Open in IMG/M
3300009180\|Ga0114979_10245717	Not Available	1073	Open in IMG/M
3300009181\|Ga0114969_10103929	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	1827	Open in IMG/M
3300009181\|Ga0114969_10481414	Not Available	697	Open in IMG/M
3300009185\|Ga0114971_10159382	Not Available	1355	Open in IMG/M
3300009185\|Ga0114971_10223451	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cyclobacteriaceae → Algoriphagus → unclassified Algoriphagus → Algoriphagus sp. CAU 1643	1109	Open in IMG/M
3300009185\|Ga0114971_10321311	Not Available	891	Open in IMG/M
3300009684\|Ga0114958_10251588	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	873	Open in IMG/M
3300009684\|Ga0114958_10370314	Not Available	695	Open in IMG/M
3300010158\|Ga0114960_10394844	Not Available	677	Open in IMG/M
3300010312\|Ga0102883_1202992	Not Available	560	Open in IMG/M
3300010885\|Ga0133913_11581385	Not Available	1655	Open in IMG/M
3300010885\|Ga0133913_11661945	Not Available	1608	Open in IMG/M
3300010885\|Ga0133913_12063679	Not Available	1413	Open in IMG/M
3300010885\|Ga0133913_12325278	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cytophagaceae → Aquirufa → Aquirufa antheringensis	1315	Open in IMG/M
3300013005\|Ga0164292_10565737	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	738	Open in IMG/M
3300013006\|Ga0164294_10364693	Not Available	994	Open in IMG/M
3300013006\|Ga0164294_10505107	Not Available	823	Open in IMG/M
3300013014\|Ga0164295_10063309	All Organisms → cellular organisms → Bacteria	2764	Open in IMG/M
3300020155\|Ga0194050_1195922	Not Available	551	Open in IMG/M
3300020155\|Ga0194050_1202812	Not Available	541	Open in IMG/M
3300020159\|Ga0211734_10612577	Not Available	1002	Open in IMG/M
3300020159\|Ga0211734_11343744	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	2749	Open in IMG/M
3300020160\|Ga0211733_10355587	Not Available	591	Open in IMG/M
3300020161\|Ga0211726_10258246	Not Available	1755	Open in IMG/M
3300020161\|Ga0211726_10608477	Not Available	1214	Open in IMG/M
3300020162\|Ga0211735_10237710	Not Available	738	Open in IMG/M
3300020162\|Ga0211735_10889629	Not Available	845	Open in IMG/M
3300020164\|Ga0194037_1098293	Not Available	1021	Open in IMG/M
3300020164\|Ga0194037_1176934	Not Available	695	Open in IMG/M
3300020164\|Ga0194037_1210436	Not Available	621	Open in IMG/M
3300020172\|Ga0211729_10426280	Not Available	565	Open in IMG/M
3300020172\|Ga0211729_11022538	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Chitinophaga → Chitinophaga rupis	2199	Open in IMG/M
3300020205\|Ga0211731_10477024	Not Available	609	Open in IMG/M
3300020562\|Ga0208597_1069925	All Organisms → cellular organisms → Bacteria	619	Open in IMG/M
3300021340\|Ga0194041_10064505	Not Available	1157	Open in IMG/M
3300021340\|Ga0194041_10090318	Not Available	956	Open in IMG/M
3300021354\|Ga0194047_10041122	Not Available	2145	Open in IMG/M
3300021354\|Ga0194047_10087974	Not Available	1339	Open in IMG/M
3300021354\|Ga0194047_10165723	Not Available	895	Open in IMG/M
3300021354\|Ga0194047_10374351	Not Available	535	Open in IMG/M
3300021600\|Ga0194059_1250976	Not Available	529	Open in IMG/M
3300021601\|Ga0194061_1152180	Not Available	690	Open in IMG/M
3300021602\|Ga0194060_10278924	Not Available	831	Open in IMG/M
3300021963\|Ga0222712_10090142	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2169	Open in IMG/M
3300023184\|Ga0214919_10000300	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	84212	Open in IMG/M
3300023184\|Ga0214919_10000755	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	55527	Open in IMG/M
3300023184\|Ga0214919_10006329	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	16307	Open in IMG/M
3300023184\|Ga0214919_10009209	Not Available	12763	Open in IMG/M
3300023184\|Ga0214919_10012977	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	10156	Open in IMG/M
3300023184\|Ga0214919_10015155	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Ulvibacter → Ulvibacter antarcticus	9120	Open in IMG/M
3300023184\|Ga0214919_10127821	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	2077	Open in IMG/M
3300023184\|Ga0214919_10263826	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cytophagaceae → Aquirufa → Aquirufa antheringensis	1221	Open in IMG/M
3300023184\|Ga0214919_10611550	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	640	Open in IMG/M
3300024346\|Ga0244775_10088988	All Organisms → cellular organisms → Bacteria	2633	Open in IMG/M
3300024346\|Ga0244775_10857368	Not Available	724	Open in IMG/M
3300024346\|Ga0244775_11157647	Not Available	604	Open in IMG/M
3300024346\|Ga0244775_11183231	Not Available	596	Open in IMG/M
3300024348\|Ga0244776_10071085	Not Available	2660	Open in IMG/M
3300024348\|Ga0244776_10441761	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	853	Open in IMG/M
3300024348\|Ga0244776_10517940	Not Available	767	Open in IMG/M
3300024348\|Ga0244776_10652142	Not Available	657	Open in IMG/M
3300027697\|Ga0209033_1033540	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	1955	Open in IMG/M
3300027733\|Ga0209297_1126166	Not Available	1072	Open in IMG/M
3300027736\|Ga0209190_1193233	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	845	Open in IMG/M
3300027746\|Ga0209597_1130921	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cyclobacteriaceae → Algoriphagus → unclassified Algoriphagus → Algoriphagus sp. CAU 1643	1093	Open in IMG/M
3300027770\|Ga0209086_10145091	Not Available	1154	Open in IMG/M
3300027797\|Ga0209107_10000606	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	20768	Open in IMG/M
3300027892\|Ga0209550_10783921	Not Available	537	Open in IMG/M
3300027974\|Ga0209299_1241165	Not Available	648	Open in IMG/M
3300033996\|Ga0334979_0001008	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	20950	Open in IMG/M
3300034050\|Ga0335023_0625682	Not Available	544	Open in IMG/M
3300034064\|Ga0335001_0291449	Not Available	893	Open in IMG/M
3300034167\|Ga0335017_0481813	Not Available	660	Open in IMG/M
3300034283\|Ga0335007_0722362	Not Available	553	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	72.50%
Marine	Environmental → Aquatic → Marine	27.50%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	59.17%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	21.67%
Lentic	Environmental → Aquatic → Freshwater → Lentic	13.33%
Unclassified	Environmental → Aquatic → Marine → Unclassified	5.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	59.17%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	21.67%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	8.33%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	5.83%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	3.33%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	1.67%

Habitat	Taxonomy	Distribution
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	24.17%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	21.67%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	15.00%
Anoxic Zone Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater	11.67%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	8.33%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	5.00%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	5.00%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	3.33%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	1.67%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	1.67%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater And Sediment	1.67%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000756	Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB hypolimnion July 2011	Environmental	Open in IMG/M
3300002408	Freshwater microbial communities from Lake Mendota, WI, sample - 15JUL2010 deep hole epilimnion (Lake Mendota Combined assembly, ASSEMBLY_DATE=20140123)	Environmental	Open in IMG/M
3300002835	Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)	Environmental	Open in IMG/M
3300003404	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM110.DCMD	Environmental	Open in IMG/M
3300004240	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MLB.SN	Environmental	Open in IMG/M
3300004802	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA2M	Environmental	Open in IMG/M
3300005581	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF	Environmental	Open in IMG/M
3300005585	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ON33MSRF	Environmental	Open in IMG/M
3300005662	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 4)	Environmental	Open in IMG/M
3300006484	Estuarine microbial communities from the Columbia River estuary, USA - metaG S.535	Environmental	Open in IMG/M
3300007545	Estuarine microbial communities from the Columbia River estuary - metaG 1547B-3	Environmental	Open in IMG/M
3300007547	Estuarine microbial communities from the Columbia River estuary - metaG 1547B-02	Environmental	Open in IMG/M
3300007549	Estuarine microbial communities from the Columbia River estuary - metaG 1548B-02	Environmental	Open in IMG/M
3300007551	Estuarine microbial communities from the Columbia River estuary - metaG 1549B-3	Environmental	Open in IMG/M
3300007562	Estuarine microbial communities from the Columbia River estuary - metaG 1561A-02	Environmental	Open in IMG/M
3300007590	Estuarine microbial communities from the Columbia River estuary - metaG 1562A-02	Environmental	Open in IMG/M
3300007597	Estuarine microbial communities from the Columbia River estuary - metaG 1563A-02	Environmental	Open in IMG/M
3300007603	Estuarine microbial communities from the Columbia River estuary - metaG 1568-02	Environmental	Open in IMG/M
3300007617	Estuarine microbial communities from the Columbia River estuary - metaG 1554B-02	Environmental	Open in IMG/M
3300007620	Estuarine microbial communities from the Columbia River estuary - metaG 1546C-02	Environmental	Open in IMG/M
3300007625	Estuarine microbial communities from the Columbia River estuary - metaG 1546B-02	Environmental	Open in IMG/M
3300007632	Estuarine microbial communities from the Columbia River estuary - metaG 1554A-3	Environmental	Open in IMG/M
3300007634	Estuarine microbial communities from the Columbia River estuary - metaG 1555A-02	Environmental	Open in IMG/M
3300008950	Estuarine microbial communities from the Columbia River estuary - metaG 1552A-02	Environmental	Open in IMG/M
3300008996	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.747	Environmental	Open in IMG/M
3300009068	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_MF_MetaG	Environmental	Open in IMG/M
3300009155	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_EF_MetaG	Environmental	Open in IMG/M
3300009158	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_MF_MetaG	Environmental	Open in IMG/M
3300009159	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG	Environmental	Open in IMG/M
3300009161	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130207_XF_MetaG	Environmental	Open in IMG/M
3300009163	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140205_XF_MetaG	Environmental	Open in IMG/M
3300009180	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140625_EF_MetaG	Environmental	Open in IMG/M
3300009181	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_MF_MetaG	Environmental	Open in IMG/M
3300009185	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140625_MF_MetaG	Environmental	Open in IMG/M
3300009684	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130208_EF_MetaG	Environmental	Open in IMG/M
3300010158	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_MF_MetaG	Environmental	Open in IMG/M
3300010312	Estuarine microbial communities from the Columbia River estuary - metaG 1549B-02	Environmental	Open in IMG/M
3300010885	northern Canada Lakes Co-assembly	Environmental	Open in IMG/M
3300013005	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES117 metaG	Environmental	Open in IMG/M
3300013006	Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - GEODES005 metaG	Environmental	Open in IMG/M
3300013014	Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - GEODES006 metaG	Environmental	Open in IMG/M
3300020155	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Sep2016-L239-10m	Environmental	Open in IMG/M
3300020159	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_108 megahit1	Environmental	Open in IMG/M
3300020160	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_105 megahit1	Environmental	Open in IMG/M
3300020161	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_101 megahit1	Environmental	Open in IMG/M
3300020162	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_201 megahit1	Environmental	Open in IMG/M
3300020164	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L304-6m	Environmental	Open in IMG/M
3300020172	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_102 megahit1	Environmental	Open in IMG/M
3300020205	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_103 megahit1	Environmental	Open in IMG/M
3300020562	Freshwater microbial communities from Lake Mendota, WI - 05MAY2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300021340	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L442-9m	Environmental	Open in IMG/M
3300021354	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L221-5m	Environmental	Open in IMG/M
3300021600	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Sep2016-L626-11m	Environmental	Open in IMG/M
3300021601	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Sep2016-L224-21m	Environmental	Open in IMG/M
3300021602	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Sep2016-L222-5m	Environmental	Open in IMG/M
3300021963	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_657D	Environmental	Open in IMG/M
3300023184	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1503	Environmental	Open in IMG/M
3300024346	Whole water sample coassembly	Environmental	Open in IMG/M
3300024348	0.2um to 3um size fraction coassembly	Environmental	Open in IMG/M
3300027697	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MLB.DN (SPAdes)	Environmental	Open in IMG/M
3300027733	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027736	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140205_XF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027746	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140625_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027770	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130207_XF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027797	Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB hypolimnion July 2011 (SPAdes)	Environmental	Open in IMG/M
3300027892	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (SPAdes)	Environmental	Open in IMG/M
3300027974	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300033996	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Jul2016-rr0004	Environmental	Open in IMG/M
3300034050	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07May2013-rr0095	Environmental	Open in IMG/M
3300034064	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME14Nov2013-rr0054	Environmental	Open in IMG/M
3300034167	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME11Apr2015-rr0082	Environmental	Open in IMG/M
3300034283	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07Aug2003-rr0061	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12421J11937_100383914	3300000756	Freshwater And Sediment	MNKMVEICMKNKAFRENYQNKPQKTETVSVTFLKNKEDNTKDTEIEMFMEWFSNQRFPEEE*
B570J29032_1099439982	3300002408	Freshwater	MNKMVEICMRNKAFRESYQTMPREANTVSVTFLKNKEDNTNNTEIEMFMERFSNQRFPEEE*
B570J40625_1000168776	3300002835	Freshwater	MKKPKMNKMVEICMRNKAFRESYQTMPREANTVSVTFLKNKEDNTNNTEIEMFMERFSNQRFPEEE*
B570J40625_1013315413	3300002835	Freshwater	MRNKAFRESYQNMRQDPNTVSVTFLKNKEDNTKDTEIEMFMQWFSNQRFPEEE*
B570J40625_1015264791	3300002835	Freshwater	MKKQKMNKMVEICMQNKAFRESYQNKKEDPQKATVTFLKKKEDTSKDAEIEMFMEWFSNQRFPEEN*
JGI25920J50251_100719963	3300003404	Freshwater Lake	MKKPKMNKMVEICMQSKAFRESYQNKKEDPQKMTVTFLKNKEENMKDSEIEMFMEWFSNQRFPEEG*
JGI25920J50251_101443711	3300003404	Freshwater Lake	MQSKAFRESYQNKKEDPQKMTVTFLKNKEENMKDSEIEMFMEWFSNQRFPEEG*
Ga0007787_100928453	3300004240	Freshwater Lake	MKKPKMNKMVEICMQNKAFRESYQNKKDDSQKVTVTFLKKKEDTFKDAEIEMFMEWFSNQRFPEEN*
Ga0007801_101541423	3300004802	Freshwater	MKKPKMNEMMEIAMENKAFREHYQNKVQDEQKFTTTFFKNKENNLADKEIEMIMEWFSNQRFPEE*
Ga0049081_102853663	3300005581	Freshwater Lentic	MKKQKMNKMVEICMQNKAFRESYQNQKDDPQKVTVPLPEKEDTHKDAEIEMFMEWFSNQRFPEEN*
Ga0049084_101911113	3300005585	Freshwater Lentic	MKKPKMNKMVEICMQNKAFRESCQNKKDDSRKVTVTFLKKKEDTFKDAEIEMFMEWFSNQRFPEEN*
Ga0078894_104564752	3300005662	Freshwater Lake	MYKEYYKPIRSINMKKPKMNKMVEICMRNKAFRESYQNMPQDLNTVSVTFLKNKEADMKDTELEMLMEWFSNQRFPEEE*
Ga0070744_101368981	3300006484	Estuarine	MKKPRINKMVEICMRNKTFRESYQNIPQDPNKVSVKFLKNKEENKKDTEIENFMEWFSNQRFSEEE*
Ga0070744_101599882	3300006484	Estuarine	MKKQKMNKMVEICMQDKAFRESYEKKVDVPRKVTVPLPEKVDTSKDAEIEMFMEWFSNQRFPEEN*
Ga0102873_12023801	3300007545	Estuarine	MNKMVEICMQDKAFREIYEKKVDVPQKVTVPLPEKVDTSKDAEIEMFMEWFSNQRFPEEN
Ga0102875_11200353	3300007547	Estuarine	MNKMVEICMQNKSFRESYQNKKEDPQKVTVTFLKKMEDTSKDDEIKMFMEWFSNQRFPEEN*
Ga0102875_11525992	3300007547	Estuarine	MYKEYYKPIRSINMIKPKMNKMVEICMRNKAFRESYQNKPQDPNKVSVSFLKNKEGNTKETDIEMFMEWFSNQRIPEEE*
Ga0102879_12686562	3300007549	Estuarine	MKKPKMNKMVEICMRNKAFRESYQNMPQDPNTVSVTFLKNKEVNMKDTEIEMFMEWFSNQRFPEEG*
Ga0102881_12252982	3300007551	Estuarine	MKKPKINKMVEICMRNKTFRESYQNIPQDPNKVSVKFLKNKEENKKDTEIENFMEWFSNQRFSEEE*
Ga0102915_12217693	3300007562	Estuarine	MKKPKMNKMVEICMRNKAFRESYQNKPQDPNKVSVSFLKNKEDNTKETDIEMFMEWFSNQRIPEEE*
Ga0102915_12923762	3300007562	Estuarine	LGRRFDLIGNVTFVKNKNISMKKPKINKMVEICMRNKTFRESYQNIPQDPNKVSVKFLKNKEENKKDTEIENFM
Ga0102917_12125051	3300007590	Estuarine	LGRRFDLIGNVTFVKNKNISMKKPKINKMVEICMRNKIFRESYQNIPQDPNKVSVNFLKNKEDNKKDTEIENFMEWFSNQRFPEEE*
Ga0102917_13311092	3300007590	Estuarine	MKKPKMNKMVEICMRNKAFRDNYQNMHQKAETVSVTFLKNKEDNTKNTEIEMFMEWFS
Ga0102919_12872443	3300007597	Estuarine	MKKPKINKMVEICMRNKTFRESYQNIPQDPNKVSVKFLKNKEENKKDTEIENFMEWFSNQ
Ga0102919_12920452	3300007597	Estuarine	MKKPKMNKMVEICMRNKAFRESYQNKPQDPNTFSVTFLKNKEDNTKDMEIEMFMEWFSNQRFPEEE*
Ga0102921_13421922	3300007603	Estuarine	LIGNVTFVNNKNMSMKEPKINKMVEICMRNKIFREGYQNIPQDPNKVSVNFLKNKEDNKKDTEIENFMEWFSNQRFPEEE*
Ga0102921_13581033	3300007603	Estuarine	FRESYQNKPQDPNKVSVSFLKNKEDNTKETDIEMFMEWFSNQRIPEEE*
Ga0102897_11871762	3300007617	Estuarine	MKKPKMNKMVMICMQDKAFRESYEKKVDVPRKVTVALPEKVDTSKDAEIEMFMEWFSNQRFPEEN*
Ga0102871_12257233	3300007620	Estuarine	MKKQKMNKMVEICMQDKAFRESYEKKVDVPRKVTVALPEKVDTSKDAEIEMFMEWFSNQRFPEEN*
Ga0102870_10919992	3300007625	Estuarine	MKKLRLKKMVEICMQNKAFRESYQNKKEDPQKATVTFLKKKEDTSKDAEIEMFMEWFSNQRFPEEN*
Ga0102870_11708031	3300007625	Estuarine	MKKSKMNKMVEICMRNKAFRESYQNKPQDPNTFSVTFLKNKEDNTKDMEIEMFMEWFSNQRFPEEE*
Ga0102894_11518012	3300007632	Estuarine	MKKQKMNKMVEICMQDKAFREIYEKKVDVPRKVTVPLPEKVDTSKDAEIEMFMEWFSNQRFPEEN*
Ga0102901_10329862	3300007634	Estuarine	MKKLRLNKMVEICMQNKAFRESYQNKKEDPQKATVTFLKKKEDTSKDAEIEMFMEWFSNQRFPEEN*
Ga0102891_11120031	3300008950	Estuarine	KMVEICMRNKAFRESYQNKPQDPNKVSVSFLKNKEDNTKETDIEMFMEWFSNQRIPEEE*
Ga0102831_11068373	3300008996	Estuarine	MYKEYYKPIRSINMIKPKMNKMVEICMRNKAFRESYQNKPQDPNKVSVSFLKNKEDNTKETDIEMFMEWFSNQRFPEEG*
Ga0114973_102623852	3300009068	Freshwater Lake	MKEPKINKMVEICMRNKIFREGYQNIPQDPNKVSVNFLKNKEDNKKDTEIENFMEWFSNQRFPEEE*
Ga0114968_107308941	3300009155	Freshwater Lake	MKKPKMNKMVEICMRNKAFRESYQNMPQDLNTVSVTFLKNKEDNTKEADIEMFMEWFSNQRIPEEE*
Ga0114977_101953202	3300009158	Freshwater Lake	MKKPKMNEMMEIAMQSKAFREHYQNKVVDQQKMTATFFKNKENNLADKEIEMIMEWFSNQRFPEI*
Ga0114977_102608864	3300009158	Freshwater Lake	ENTMNMKKPKMNKMVEICMRNKAFRESYQNMPQDPNTVSVSLLKNKEDNTKDTEIEMFMEWLSNQRFPEEE*
Ga0114977_105694202	3300009158	Freshwater Lake	MKKPKMNKMVEICMKNKAFRENYQNKPQKTDSVSVTFLKNNKVSTKDTQIEMFMEWFSNQRLPEEE*
Ga0114977_107853671	3300009158	Freshwater Lake	NWKDLTLVEKALRESYQKKGDAPEEVIVPFLEMEDTSKDAEIEMFMEWFLNQRFPEEN*
Ga0114978_105671772	3300009159	Freshwater Lake	MNMKKPKMNKMVEICMRNKAFRESYQNMPQDPNTVSVSLLKNKEDNTKDTEIEMFMEWLSNQRFPEKE*
Ga0114966_100389133	3300009161	Freshwater Lake	MKKPKMNKMVEICMQNKAFRESYQNKKDDSQKVTVTFLKKKEDTFKDAKIEMFMEWFSNQRFPEEN*
Ga0114966_102958353	3300009161	Freshwater Lake	MKKPIMNKMVEICMRNKAFRENYQNKPQKTDSVSVTFLKNNKVSTKDTQIEMFMEWFSNQRLPEEE*
Ga0114966_103360872	3300009161	Freshwater Lake	MKKPKKNKMVEICMRNKAFRDSYQNMPQDPNTVSVTFLKNKEDNTNDTEIEMFMEWFSNQRFPEEE*
Ga0114970_101067864	3300009163	Freshwater Lake	MKKPKMNKMVEICMQNKAFRDSYQNKKDDSQKVTVTFLKKKEDTFKDAKIEMFMEWFSNQRFPEEN*
Ga0114979_102457172	3300009180	Freshwater Lake	MKKPKMNKMVEICMRNKAFRENYQNMPQDPNTVSVSFLKNKEDNTKDTEIKMFMEWLSNQRFPEKE*
Ga0114969_101039292	3300009181	Freshwater Lake	MKKPKMNKMTEICMRNKAFRESYQNNKKYPEMISVTFLKNKEGNMKDSEIEIFMEWLSNQRFPEMDS*
Ga0114969_104814142	3300009181	Freshwater Lake	MKKPKMNKMVEICMRNKAFRETYQNMPQDLNTVSVTFLKNKEDNTKEADIEMFMEWFSNQRFPEEE*
Ga0114971_101593824	3300009185	Freshwater Lake	MKKPKMNKMVEICMRNKAFRDSYQNMPQDPNTVSVTFLKNKEDNTNDTEIEMFMEWFSNQRFPEEE*
Ga0114971_102234511	3300009185	Freshwater Lake	KMVEICMRNKAFRESYQNMPQDPNTVSVTFLKNKEDNTKETDIEMFMEWFSNQRIPEEE*
Ga0114971_103213111	3300009185	Freshwater Lake	MKKPKMNKMVEICMQNKAFRESYQNKKEDPQKITVTFHKNTKDDIIDNEIEMFMEWFSNQRFPELES*
Ga0114958_102515882	3300009684	Freshwater Lake	MIFPQKNYKNMKKPKMNKMTEICMKNKAFRESYQNKKEYPEMISVTFLKNKQGNMKDSEIEMFMEWLSNQRFPEMDS*
Ga0114958_103703142	3300009684	Freshwater Lake	MKKPKMNKMVEICMRNKAFRESYQNKPQDPNTVSVSLLKNKEDNTKDTEIEMFMEWLSNQRFPEKE*
Ga0114960_103948442	3300010158	Freshwater Lake	MKKPKMNKMVEICMRNKAFRESYQNKPQDPNTVSVTFVKNKENNTKDTEIEMFMEWFSNQRIPEEE*
Ga0102883_12029922	3300010312	Estuarine	MKKQKMNKMVEICMQDKAFRESYEKKVDVPRKVTVPLPEKVDTSKDAEIEMFMEWFSNQRFPEQN*
Ga0133913_115813855	3300010885	Freshwater Lake	MKKQKMNKMVEICMQNKAFRESYEKKVDVPRKVTVPFLEKEDTLKDAEIEMFMEWFSNQRFPEEN*
Ga0133913_116619453	3300010885	Freshwater Lake	MKKPKMNKMVEICMRNKAFRESYQNMPQDPNTFSVTFLKNKEDNMKDTEIDKFMEWFSNQGFPEEE*
Ga0133913_120636791	3300010885	Freshwater Lake	MKKQKMNKMVEICMQNKAFRESYQYKKEDPEKISVTFLKNKENNKKDLEIEMFMEWFSNQKFPEEE*
Ga0133913_123252782	3300010885	Freshwater Lake	MKKQKMNKMVEICMQNKSFRESYQNKKEDPQKVTVTFLKKMEDTSKDDEIKMFIEWFSNQLFPEEN*
Ga0164292_105657372	3300013005	Freshwater	MKKQKMNKMVEICMRNKSFRESYQYKKDDPQKVTVTFLNKKEYTSKDAEIEMFMEWFSNQRFPEIDS*
Ga0164294_103646932	3300013006	Freshwater	MVEICMRNKAFRESYQNMPQDPNTVSVTFLKDKEDNTKDTEIEIFMEWFSNQRFPEEE*
Ga0164294_105051071	3300013006	Freshwater	MKKTKMNKMVEICMRNKVFRENYQNKPQKTDSVSVTFLKNNKVSTKDTQIEMFMEWFSNQRLPQEG*
Ga0164295_100633094	3300013014	Freshwater	MNKMVEICMRNKAFRESYQNMPQDPNTVSVTFLKDKEDNTKDTEIEIFMEWFSNQRFPEEE*
Ga0194050_11959221	3300020155	Anoxic Zone Freshwater	AFRESYQNMYQKTETVSVTFLKNKEDISKDTEIEMFLEWFSNQRFPEEE
Ga0194050_12028122	3300020155	Anoxic Zone Freshwater	MNKMVEICMRNKVFRENYQNKPQKTDSVSVTFLKNNKVSTKDTQIEMFMEWFSNQRFPEE
Ga0211734_106125772	3300020159	Freshwater	MNKMVKICMSNKAFRDSYQNMPQDPNTVSVTFLKNKEYNTNDTEIEMFMEWFSNQRFPEE
Ga0211734_113437444	3300020159	Freshwater	MKRQKMNKMVEICMQNKVFRESYEKKGDAPQKVTVPLPEKEDTHKDAEIEMFMEWFSNQRFPEEN
Ga0211733_103555871	3300020160	Freshwater	NMKKQKMNKMVEICMRNKAFRESYQNMPQDPNAVSVSFLKNKEDNTKDTEIEMFMEWFSNQRFPKEN
Ga0211726_102582464	3300020161	Freshwater	MVEICMKNKAFRENYQNKPQETDTVSVIFLKNKEDNTNDTEIEMFIEWFSNQRFPEEK
Ga0211726_106084771	3300020161	Freshwater	MKKQKMNKMVEICMQENAFRESYEKKVDVPRKVTVPLPEKVDTSKDAEIEMFMEWFSNQRFPEEN
Ga0211735_102377102	3300020162	Freshwater	MKKQKMNKMVEICMQDKAFRESYEKKVDVPRKVTVPLPEKVDTSKDAEIEMFMEWFSNQRFPEEN
Ga0211735_108896292	3300020162	Freshwater	MKKPKMNKMVEICMQNKAFRESYQNKNDESQKVSVTFLKKKEHTSKDAEIELFMEWFSNQRFPKEN
Ga0194037_10982931	3300020164	Anoxic Zone Freshwater	MKKPKMNEMMEIAMQSKAFREHYQNKVVDQQKMTATFFKNKENNLEDKEIEMIMEWFSNQRFPEI
Ga0194037_11769343	3300020164	Anoxic Zone Freshwater	MKKSKMNWMAKAAMENKAFREHYQNKVEDQQKMTATFFKNKENNLADKEIEMIVEWFSNQRFPIVF
Ga0194037_12104361	3300020164	Anoxic Zone Freshwater	EICMQNKAFRESYQNKKDDSQKVIVTFLKKKEENMNDSEIEMFMEWFSNQRFPEMDS
Ga0211729_104262802	3300020172	Freshwater	MNKMVEICMKNKAFRENYQNKPQETDTVSVIFLKNKEDNTNDTEIEMFIEWFSNQRFPEE
Ga0211729_110225384	3300020172	Freshwater	MKKPKMNKMVEICMQNKAFRENYQKKREDPQKVNVTFLKKMEDTSKDDEIKMFMEWFSNQRFPEEN
Ga0211731_104770242	3300020205	Freshwater	MKKQKMNKMVEICMQDKAFRQNYEKKVDLPRKVTVPLPEKVDTSKDAEIEMFMEWFSNQRFPEEN
Ga0208597_10699253	3300020562	Freshwater	INMKKPKMNKMVEICMRNKAFRESYQTMPREANTVSVTFLKNKEDNTNNTEIEMFMERFSNQRFPEEE
Ga0194041_100645053	3300021340	Anoxic Zone Freshwater	MKKPKMNEMMEIAMENKAFREHYQNKVQDEQKFTTTFFKNKENNLADKEIEMIMEWFSNQRFPEI
Ga0194041_100903181	3300021340	Anoxic Zone Freshwater	MKKQKMNKMVEICMQNKAFRESYQYKKEDPEKISVTFLKNKENNKKDLEIEMFMEWFSNQKFPEEE
Ga0194047_100411222	3300021354	Anoxic Zone Freshwater	MKKPKMNKMVEICMQNKAFRESYQNKKDDSQKVIVTFLKKKEENMNDSEIEMFMEWFSNQRFPEMDS
Ga0194047_100879743	3300021354	Anoxic Zone Freshwater	MDNLKMNKMVEIAMQNKAFRERYQNKKEDKQKVSVTFFKIKENNMEDSDIEKIMEWFSNQRFPEMK
Ga0194047_101657231	3300021354	Anoxic Zone Freshwater	MYKEYYKPIRSINMIKPKMNKMVEICMRNKAFRESYQNKPQDPNTVSVSLLKNKEDNTKETDIEMFMEWFSNQRIPEEE
Ga0194047_103743512	3300021354	Anoxic Zone Freshwater	EICMQNKAFRESYQYKKEDPEKISVTFLKNKENNKKDLEIEMFMEWFSNQKFPEEE
Ga0194059_12509761	3300021600	Anoxic Zone Freshwater	MKKPKMNKMVEICMRNKAFRESYQNMPQDPNTVSVTFLKNKEDKTKDTEIEMFMEWFSNQRFPEEE
Ga0194061_11521803	3300021601	Anoxic Zone Freshwater	MKKPKMNEMMEIAMENKAFREHYQNKVQDEQKFTTTFFKNKENNLADKEIEMIMEWFS
Ga0194060_102789241	3300021602	Anoxic Zone Freshwater	KKPKINKMVEICMRNKTFRESYQNIPQDPNKVSVKFLKNKEENKKDTEIENFMEWFSNQRFSEEE
Ga0222712_100901425	3300021963	Estuarine Water	MKRQKMNKMVEICMRNKAFRESYEKKVDVPRKVTVPLQEKEDTSKDAEIEMFMEWFSNQRFPEEN
Ga0214919_1000030050	3300023184	Freshwater	MKKPKMNEMMEIAMQSKAFRKHYQNKVQDEQKFTTTFFKNKENNLADKEIEMIMEWFSNQQFPEI
Ga0214919_1000075563	3300023184	Freshwater	MKKPKMNKMVEICMRNKAFRENYQNKPQDPNTVSVTFLKNKENSTKDTEIEMFMEWFSNQRFPEEE
Ga0214919_100063295	3300023184	Freshwater	MKKPKMNKMVEICMRNKAFRDSYQNMPQDPNTVSVTFLKNKEDNTNDTEIEMFMEWFSNQRFPEEE
Ga0214919_1000920920	3300023184	Freshwater	MKKQKMNKMVEICMQDKAFGENYQKKGDAPQKVTVPFLEKEDTSKDAEIEMFMEWFSNQRFPEES
Ga0214919_1001297710	3300023184	Freshwater	MKKQKMNKMVEICMQDKAFRESYEKKVDVPRKVTEPLPEKVDTSKDAEIEMFMEWFSNQRFPEEN
Ga0214919_100151555	3300023184	Freshwater	MKKPKMNKMVEICMRNKAFRESYQNMPEDPNTFSVTFLKNKEDNMKDTEIDKFMEWFSNQRFPEEE
Ga0214919_101278215	3300023184	Freshwater	MKKPKMNKMVEICMRNKAFRESYQNKKEDPQKVTVTFLKIKEDTSKDAEIEMFMEWFLNQRFPEEN
Ga0214919_102638263	3300023184	Freshwater	MKNQKMNKMVEICMQNKSFRESYQNKKEDPQKVTVTFLKKMEDTSKDDEIKMFMEWFSNQRFPEEK
Ga0214919_106115501	3300023184	Freshwater	MKKPKINKMVEICMPNKAFRENYQKKNEDPQKINVTFLKNKEDVMKDEEIEMFMEWFSNQRFPEIDC
Ga0244775_100889886	3300024346	Estuarine	MYKEYYKPIRSINMIKPKMNKMVEICMRNKAFRESYQNKPQDPNKVSVSFLKNKEDNTKETDIEMFMEWFSNQRIPEEE
Ga0244775_108573682	3300024346	Estuarine	MKKPKMNKMVEICMRNKAFRESYQNMPQDLNTVSVTLLKNKEDKTKDMEIEMFMEWFSNQRFPEEG
Ga0244775_111576472	3300024346	Estuarine	MKKPKMNKMVEICMQSKAFRESYQNKKEDPQKMTVTFLKNKEENMKDSEIEMFMEWFSNQRFPEEG
Ga0244775_111832312	3300024346	Estuarine	MKKPRINKMVEICMRNKTFRESYQNIPQDPNKVSVKFLKNKEENKKDTEIENFMEWFSNQRFSEEE
Ga0244776_100710855	3300024348	Estuarine	MNMKKSKMNKMVEICMRNKAFRESYQNMPQDPNTFSVTFLKNKEDNMKDTEIDKFMEWFSNQRFPEEE
Ga0244776_104417613	3300024348	Estuarine	MKKQKMNKMVEICMQDKAFREIYEKKVDVPQKVTVPLPEKVDTSKDAEIEMFMEWFSNQRFPEEN
Ga0244776_105179402	3300024348	Estuarine	MKKPKINKMVEICMRNKTFRESYQNIPQDPNKVSVKFLKNKEENKKDTEIENFMEWFSNQRFSEEE
Ga0244776_106521422	3300024348	Estuarine	MKKQKMNKMVEICMQNKSFRESYQNKKEDPQKVTVTFLKKMEDTSKDDEIKMFMEWFSNQRFPEEN
Ga0209033_10335401	3300027697	Freshwater Lake	LNKMVEICMQNKAFRESYQNKKDDSQKVTVTFLKKKEDTFKDAEIEMFMEWFSNQRFPEE
Ga0209297_11261661	3300027733	Freshwater Lake	MNKMVEICMKNKAFRENYQNKPQKTDSVSVTFLKNNKVSTKDTQIEMFMEWLSNQRFPEE
Ga0209190_11932332	3300027736	Freshwater Lake	MKKPKMNKMVKICMQSKAFRESYQNKKEDPQIMTVTFLKNKKENMKDLEIEMFMEWFSNQRFPEMDS
Ga0209597_11309214	3300027746	Freshwater Lake	NKAFRESYQNMPQDPNTVSVTFLKNKEDNTKETDIEMFMEWFSNQRIPEEE
Ga0209086_101450912	3300027770	Freshwater Lake	MKKPKMNKMVEICMQNKAFRESYQNKKDDSQKVTVTFLKKKEDTFKDAKIEMFMEWFSNQRLPEEE
Ga0209107_100006067	3300027797	Freshwater And Sediment	MKKTKMNKMVEICMKNKAFRENYQNKPQKTETVSVTFLKNKEDNTKDTEIEMFMEWFSNQRFPEEE
Ga0209550_107839211	3300027892	Freshwater Lake	MKKPKMNKMVEICMQSKAFRESYQNKKEDPQKMTVTFLKNKEENMKDSEIEMFMEW
Ga0209299_12411651	3300027974	Freshwater Lake	VTFVKNKNISMKKPKINKMVEICMRNKTFRESYQNIPQDPNKVSVKFLKNKEENKKDTEIENFMEWFSNQRFSEEE
Ga0334979_0001008_10367_10567	3300033996	Freshwater	MKKQKMNKMVEICMQDKAFGESYQNMPQDPNTVSVIFLKNKEADMKDTELEMFMEWFSNQRFPEEE
Ga0335023_0625682_200_400	3300034050	Freshwater	MKKPKMNKMVKICMRNKAFRDSYQNMHQKTETVSVTFLKNKEDISKNTEIEMFLEWFSNQRFPEEE
Ga0335001_0291449_410_610	3300034064	Freshwater	MKKPKMNKMVEICMRNKAFRESYQTMPREANTVSVTFLKNKEDNTNNTEIEMFMERFSNQRFPEEE
Ga0335017_0481813_282_479	3300034167	Freshwater	MKKQKMNKMVEICMQDKAFRENYEKKVDLPRKVTVPLPEKVDTYKVAEIEMFMEWFSNQRFPEEN
Ga0335007_0722362_391_552	3300034283	Freshwater	MKKQKMNKMVEICMQDKAFRENYEKKVDLPRKVTVPLPEKVDTYKVAEIEMFME

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F073541

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences