NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F073518

Metagenome / Metatranscriptome Family F073518

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F073518
Family Type Metagenome / Metatranscriptome
Number of Sequences 120
Average Sequence Length 55 residues
Representative Sequence AALAVPVAPADPAELLEPAELLGDADPAVDDPAGALVAAGLGPAGALGENERRMDS
Number of Associated Samples 116
Number of Associated Scaffolds 120

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 99.17 %
% of genes from short scaffolds (< 2000 bps) 95.00 %
Associated GOLD sequencing projects 114
AlphaFold2 3D model prediction Yes
3D model pTM-score0.27

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (100.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(23.333 % of family members)
Environment Ontology (ENVO) Unclassified
(25.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(44.167 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Fibrous Signal Peptide: No Secondary Structure distribution: α-helix: 28.57%    β-sheet: 0.00%    Coil/Unstructured: 71.43%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.27
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 120 Family Scaffolds
PF10611DUF2469 83.33
PF03636Glyco_hydro_65N 6.67
PF00702Hydrolase 5.83
PF13419HAD_2 3.33

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 120 Family Scaffolds
COG1554Phosphatase/phosphodiesterase/kojibiose phosphorylase YcjT/PafA/Npp1, AlkP superfamilyCarbohydrate transport and metabolism [G] 6.67

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms100.00 %
UnclassifiedrootN/A0.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000837|AP72_2010_repI_A100DRAFT_1068331All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia505Open in IMG/M
3300001979|JGI24740J21852_10196544All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia500Open in IMG/M
3300002076|JGI24749J21850_1073397All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales531Open in IMG/M
3300003505|JGIcombinedJ51221_10134215All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales996Open in IMG/M
3300004633|Ga0066395_10824314All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia558Open in IMG/M
3300005104|Ga0066818_1007274All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia764Open in IMG/M
3300005105|Ga0066812_1021324All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia536Open in IMG/M
3300005187|Ga0066675_10400847All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales1013Open in IMG/M
3300005327|Ga0070658_10079911All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales2685Open in IMG/M
3300005330|Ga0070690_100113546All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1810Open in IMG/M
3300005338|Ga0068868_101965963All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia555Open in IMG/M
3300005343|Ga0070687_100238102All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura1124Open in IMG/M
3300005441|Ga0070700_101305598All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia610Open in IMG/M
3300005540|Ga0066697_10582178All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia623Open in IMG/M
3300005546|Ga0070696_100431538All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales1037Open in IMG/M
3300005553|Ga0066695_10761733All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia562Open in IMG/M
3300005615|Ga0070702_100638646All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia803Open in IMG/M
3300005719|Ga0068861_101055568All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia778Open in IMG/M
3300006574|Ga0074056_11844763All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales2372Open in IMG/M
3300006577|Ga0074050_11934341All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia684Open in IMG/M
3300006806|Ga0079220_11443546All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales586Open in IMG/M
3300006871|Ga0075434_100297372All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae1634Open in IMG/M
3300007788|Ga0099795_10257438All Organisms → cellular organisms → Bacteria755Open in IMG/M
3300009162|Ga0075423_10703951All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales1067Open in IMG/M
3300009176|Ga0105242_10895389All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales887Open in IMG/M
3300010117|Ga0127449_1138428All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1089Open in IMG/M
3300010118|Ga0127465_1155020All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales807Open in IMG/M
3300010122|Ga0127488_1117708All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1191Open in IMG/M
3300010139|Ga0127464_1217503All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura1095Open in IMG/M
3300010147|Ga0126319_1386390All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia572Open in IMG/M
3300010152|Ga0126318_10160647All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales830Open in IMG/M
3300010159|Ga0099796_10400184All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia602Open in IMG/M
3300010322|Ga0134084_10355476All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia559Open in IMG/M
3300010329|Ga0134111_10481799All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia542Open in IMG/M
3300010366|Ga0126379_11601574All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia756Open in IMG/M
3300012199|Ga0137383_10847425All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria667Open in IMG/M
3300012202|Ga0137363_10684496All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura rifamycini868Open in IMG/M
3300012206|Ga0137380_10267224All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1539Open in IMG/M
3300012211|Ga0137377_10127253All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales2432Open in IMG/M
3300012361|Ga0137360_10315331All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1301Open in IMG/M
3300012376|Ga0134032_1217753All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia519Open in IMG/M
3300012395|Ga0134044_1036713All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria549Open in IMG/M
3300012401|Ga0134055_1045939All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia527Open in IMG/M
3300012404|Ga0134024_1000911All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria708Open in IMG/M
3300012405|Ga0134041_1205506All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales797Open in IMG/M
3300012407|Ga0134050_1101260All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria695Open in IMG/M
3300012409|Ga0134045_1258116All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales960Open in IMG/M
3300012410|Ga0134060_1172663All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia514Open in IMG/M
3300012410|Ga0134060_1412695All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae1034Open in IMG/M
3300012481|Ga0157320_1039608All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia506Open in IMG/M
3300012482|Ga0157318_1004659All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales843Open in IMG/M
3300012491|Ga0157329_1006465All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria827Open in IMG/M
3300012494|Ga0157341_1007497All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales870Open in IMG/M
3300012507|Ga0157342_1003582All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1337Open in IMG/M
3300012515|Ga0157338_1012610All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales886Open in IMG/M
3300012685|Ga0137397_10284906All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales1231Open in IMG/M
3300012915|Ga0157302_10213760All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales700Open in IMG/M
3300012924|Ga0137413_10870626All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura697Open in IMG/M
3300012944|Ga0137410_10781515All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales800Open in IMG/M
3300012948|Ga0126375_10821232All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria738Open in IMG/M
3300012989|Ga0164305_11366145All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria622Open in IMG/M
3300014487|Ga0182000_10475357All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia575Open in IMG/M
3300014969|Ga0157376_12088126All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria605Open in IMG/M
3300015242|Ga0137412_10391688All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales1076Open in IMG/M
3300017936|Ga0187821_10473145All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia522Open in IMG/M
3300017994|Ga0187822_10298916All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia567Open in IMG/M
3300018433|Ga0066667_11293007All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria637Open in IMG/M
3300018468|Ga0066662_11659314All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia668Open in IMG/M
3300019875|Ga0193701_1049444All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia852Open in IMG/M
3300019883|Ga0193725_1094884All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales712Open in IMG/M
3300020080|Ga0206350_10363668All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia613Open in IMG/M
3300020199|Ga0179592_10473112All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia539Open in IMG/M
3300021315|Ga0179958_1020659All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia509Open in IMG/M
3300021363|Ga0193699_10436732All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia540Open in IMG/M
3300021405|Ga0210387_10397400All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1221Open in IMG/M
3300021405|Ga0210387_11305737All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia627Open in IMG/M
3300021432|Ga0210384_10893277All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria788Open in IMG/M
3300021432|Ga0210384_11596304All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia558Open in IMG/M
3300021479|Ga0210410_11469622All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia574Open in IMG/M
3300021559|Ga0210409_10377424All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1271Open in IMG/M
3300021560|Ga0126371_12432495All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria633Open in IMG/M
3300022508|Ga0222728_1106875All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia536Open in IMG/M
3300022530|Ga0242658_1027453All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1077Open in IMG/M
3300022530|Ga0242658_1127787All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia636Open in IMG/M
3300022532|Ga0242655_10070777All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae904Open in IMG/M
3300022533|Ga0242662_10132573All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales739Open in IMG/M
3300022724|Ga0242665_10047323All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1131Open in IMG/M
3300024178|Ga0247694_1030066All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria610Open in IMG/M
3300024179|Ga0247695_1026405All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria822Open in IMG/M
3300024288|Ga0179589_10014192All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales2474Open in IMG/M
3300025917|Ga0207660_11179903All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria623Open in IMG/M
3300025922|Ga0207646_10603875All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria985Open in IMG/M
3300026023|Ga0207677_10356603All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1227Open in IMG/M
3300026035|Ga0207703_11459214All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria658Open in IMG/M
3300026330|Ga0209473_1334878All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia506Open in IMG/M
3300027576|Ga0209003_1073940All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria628Open in IMG/M
3300027787|Ga0209074_10132359All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales879Open in IMG/M
3300028791|Ga0307290_10252773All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria646Open in IMG/M
3300030904|Ga0308198_1020992All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales876Open in IMG/M
3300030989|Ga0308196_1048740All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia581Open in IMG/M
3300031058|Ga0308189_10095984All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales931Open in IMG/M
3300031469|Ga0170819_12213533All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae880Open in IMG/M
3300031545|Ga0318541_10264804All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales956Open in IMG/M
3300031572|Ga0318515_10301664All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia859Open in IMG/M
3300031640|Ga0318555_10065899All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1863Open in IMG/M
3300031723|Ga0318493_10523966All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria656Open in IMG/M
3300031748|Ga0318492_10227488All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia960Open in IMG/M
3300031769|Ga0318526_10288417All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia671Open in IMG/M
3300031782|Ga0318552_10081964All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1574Open in IMG/M
3300031846|Ga0318512_10368418All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia720Open in IMG/M
3300031880|Ga0318544_10067776All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1313Open in IMG/M
3300031896|Ga0318551_10155176All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1251Open in IMG/M
3300032043|Ga0318556_10032079All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales2451Open in IMG/M
3300032060|Ga0318505_10123391All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales1188Open in IMG/M
3300032068|Ga0318553_10374664All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria745Open in IMG/M
3300032090|Ga0318518_10207198All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales1004Open in IMG/M
3300032828|Ga0335080_10334170All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales1637Open in IMG/M
3300032897|Ga0335071_10071123All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia3413Open in IMG/M
3300033158|Ga0335077_10854447All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia921Open in IMG/M
3300034680|Ga0370541_060106All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia513Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil23.33%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil12.50%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil11.67%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil8.33%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere5.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil4.17%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil3.33%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere3.33%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil2.50%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil2.50%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment1.67%
SoilEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil1.67%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.67%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil1.67%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil1.67%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil1.67%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere1.67%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.67%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere1.67%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere1.67%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.83%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.83%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.83%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.83%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.83%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.83%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.83%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere0.83%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000837Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A100EnvironmentalOpen in IMG/M
3300001979Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6Host-AssociatedOpen in IMG/M
3300002076Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3Host-AssociatedOpen in IMG/M
3300003505Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)EnvironmentalOpen in IMG/M
3300004633Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBioEnvironmentalOpen in IMG/M
3300005104Soil and rhizosphere microbial communities from Laval, Canada - mgHACEnvironmentalOpen in IMG/M
3300005105Soil and rhizosphere microbial communities from Laval, Canada - mgHPCEnvironmentalOpen in IMG/M
3300005187Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124EnvironmentalOpen in IMG/M
3300005327Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaGHost-AssociatedOpen in IMG/M
3300005330Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaGEnvironmentalOpen in IMG/M
3300005338Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2Host-AssociatedOpen in IMG/M
3300005343Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaGEnvironmentalOpen in IMG/M
3300005441Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaGEnvironmentalOpen in IMG/M
3300005540Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146EnvironmentalOpen in IMG/M
3300005546Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaGEnvironmentalOpen in IMG/M
3300005553Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144EnvironmentalOpen in IMG/M
3300005615Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaGEnvironmentalOpen in IMG/M
3300005719Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2Host-AssociatedOpen in IMG/M
3300006574Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAA (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006577Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPA (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006806Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100EnvironmentalOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300007788Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2EnvironmentalOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300010117Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_4_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010118Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_2_16_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010122Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_4_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010139Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_2_8_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010147Soil microbial communities from California, USA to study soil gas exchange rates - BB-CA-RED metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010152Soil microbial communities from Oklahoma, USA to study soil gas exchange rates - GP-OK-ARM metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010159Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3EnvironmentalOpen in IMG/M
3300010322Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010329Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300012199Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012206Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012376Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_0_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012395Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_8_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012401Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_16_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012404Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_8_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012405Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_24_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012407Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_16_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012409Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_16_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012410Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_16_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012481Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.1.yng.040610Host-AssociatedOpen in IMG/M
3300012482Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.2.old.130510Host-AssociatedOpen in IMG/M
3300012491Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.8.old.040610Host-AssociatedOpen in IMG/M
3300012494Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.2.yng.030610Host-AssociatedOpen in IMG/M
3300012507Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.7.yng.070610Host-AssociatedOpen in IMG/M
3300012515Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.7.yng.070610Host-AssociatedOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012915Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2EnvironmentalOpen in IMG/M
3300012924Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012948Tropical forest soil microbial communities from Panama - MetaG Plot_14EnvironmentalOpen in IMG/M
3300012989Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MGEnvironmentalOpen in IMG/M
3300014487Bulk soil microbial communities from Mexico - Magueyal (Ma) metaGEnvironmentalOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300015242Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300017936Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1EnvironmentalOpen in IMG/M
3300017994Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2EnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300019875Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s2EnvironmentalOpen in IMG/M
3300019883Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a2EnvironmentalOpen in IMG/M
3300020080Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300020199Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300021315Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_2_06_16RNAfungal (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300021363Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c2EnvironmentalOpen in IMG/M
3300021405Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-OEnvironmentalOpen in IMG/M
3300021432Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-MEnvironmentalOpen in IMG/M
3300021479Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-MEnvironmentalOpen in IMG/M
3300021559Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-MEnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300022508Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-19-M (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300022530Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022532Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022533Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022724Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300024178Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK35EnvironmentalOpen in IMG/M
3300024179Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK36EnvironmentalOpen in IMG/M
3300024288Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungalEnvironmentalOpen in IMG/M
3300025917Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026023Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026035Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026330Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)EnvironmentalOpen in IMG/M
3300027576Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027787Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)EnvironmentalOpen in IMG/M
3300028791Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144EnvironmentalOpen in IMG/M
3300030904Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_202 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030989Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_197 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031058Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031469Fir Spring Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031545Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26EnvironmentalOpen in IMG/M
3300031572Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19EnvironmentalOpen in IMG/M
3300031640Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23EnvironmentalOpen in IMG/M
3300031723Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23EnvironmentalOpen in IMG/M
3300031748Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22EnvironmentalOpen in IMG/M
3300031769Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24EnvironmentalOpen in IMG/M
3300031782Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20EnvironmentalOpen in IMG/M
3300031846Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19EnvironmentalOpen in IMG/M
3300031880Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25EnvironmentalOpen in IMG/M
3300031896Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19EnvironmentalOpen in IMG/M
3300032043Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24EnvironmentalOpen in IMG/M
3300032060Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18EnvironmentalOpen in IMG/M
3300032068Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21EnvironmentalOpen in IMG/M
3300032090Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22EnvironmentalOpen in IMG/M
3300032828Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4EnvironmentalOpen in IMG/M
3300032897Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5EnvironmentalOpen in IMG/M
3300033158Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1EnvironmentalOpen in IMG/M
3300034680Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_116 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
AP72_2010_repI_A100DRAFT_106833123300000837Forest SoilGDADPAIAGPAGALVAAGFGLGAAPGENERRMDS*
JGI24740J21852_1019654413300001979Corn RhizosphereLLGDADPAVDDLAGALVAAALGPAGALGENERRMES*
JGI24749J21850_107339713300002076Corn, Switchgrass And Miscanthus RhizosphereVNVTRAAALAVPVAPTDPADLLEPADLLGDADPAVDDPAGALVAAALGPAGALGENERRMES*
JGIcombinedJ51221_1013421513300003505Forest SoilLAVPAVPADPAELLEPAELLGDADPAVDDPAGALVAAGLGPAGALGENERRMDS*
Ga0066395_1082431413300004633Tropical Forest SoilPAELLEPAGLLDDADPVIAGPAGALVAAGFGPAAAPGENERRMDS*
Ga0066818_100727413300005104SoilEHGPSPVHRYSFVNVTRAAALAVPVAPADPAELLEPAELLGDADPVVGDPAGTLVTAGLGPAGALGENERRMDS*
Ga0066812_102132423300005105SoilPADPAELLEPAELLGDADPAVDDPAGTLVTAGLGPAGALGENERRMDS*
Ga0066675_1040084733300005187SoilVAPNDPADLLEPADLLDDADPAVDDPAGALVAAALGPAGALGENERRMDS*
Ga0070658_1007991143300005327Corn RhizosphereTRAAALAVPVAPTDPADLLEPADLLGDADPAVDDPAGALVAAALGPAGALGENERRMES*
Ga0070690_10011354613300005330Switchgrass RhizospherePTDPADLLEPAELGDAGPAVDDPAGTLVTAGLGPAGALGENERRMES*
Ga0068868_10196596313300005338Miscanthus RhizospherePSPVHRYSFVNVTRAAALAVPAVEVDPAELLEPAELLGDADPAVDDPAGALVAAGLGPAGALGENERRMDS*
Ga0070687_10023810213300005343Switchgrass RhizosphereDPSELLEPAELLDDADPAVQDPAGALVSAGFGPAGAVGENERRMDS*
Ga0070700_10130559813300005441Corn, Switchgrass And Miscanthus RhizosphereVPVAPTDPADLLEPADLLGDADPAVDDPAGALVAAALGPAGALGENERRMES*
Ga0066697_1058217813300005540SoilGPSPVHRYSFVNVTRAAALAVPVAPADPAELLEPAELLGDAGPAVDDPAGTLVTAGLAPAGALGENERRMDS*
Ga0070696_10043153813300005546Corn, Switchgrass And Miscanthus RhizosphereLAVPAAPTDPSELLEPAELLDDADPVVQDPAGALVSAGLGLAGAVGENERRMDS*
Ga0066695_1076173313300005553SoilVHRYSFVNVTRAAALAVPAVPVDPAELLEPAELLGDADPAVDDPAGTLVAAGLGPAGALGENERRMDS*
Ga0070702_10063864633300005615Corn, Switchgrass And Miscanthus RhizosphereYSFVNVTRAAALAVPVAPTDPADLLEPADLLGDADPAVDDPAGALVAAALGPAGALGENERRMES*
Ga0068861_10105556833300005719Switchgrass RhizosphereTRAAALAVPVAPTDPADLLEPADLLGDADPAVDDLAGALVAAALGPAGALGENERRMES*
Ga0074056_1184476343300006574SoilELLEPAELLGDADPAVDDPAGTLVTAGLGPAGALGENERRMDS*
Ga0074050_1193434133300006577SoilAEHGPSPVHRYSFVNVTRAAALAVPAVPADPAELLEPAELLGDADPAVDDPAGTLVTAGLGPAGALGDNERRMDS*
Ga0079220_1144354633300006806Agricultural SoilEPAELLGDADPAVDDPAGALVAAGLGPAGALGENERRMDS*
Ga0075434_10029737213300006871Populus RhizospherePVHRYSFVNVTRAAALAVPVAPADPADLLEPADLLGDADPAVDDPAGALVAAALGPAGALGENERRMES*
Ga0099795_1025743833300007788Vadose Zone SoilNVTRAAAQAVPAAPTDPSELLEPAELLDDADPVVEDPAGALVAAGLGPAGALGENERRMDS*
Ga0075423_1070395133300009162Populus RhizosphereLAVPVAPTDPADLLEPADLLGDADPAVDDPAGALVAAALGPAGALRENERRMES*
Ga0105242_1089538913300009176Miscanthus RhizosphereDPADLLEPADLLGDADPAVDDPAGALVAAALGPAGALGENERRMES*
Ga0127449_113842833300010117Grasslands SoilEPAELLGDAGPAVDDPAGTLVTAGLAPAGALGENERRMDS*
Ga0127465_115502013300010118Grasslands SoilLLDDAYPAVQDSTGALVAAGLGPAGAPGENERRMDS*
Ga0127488_111770833300010122Grasslands SoilFVNVTRAAALAVPAAPTDPSALLEPAELLDDADPAVQDPAGALVAAGLGPAGALGENDRRMDS*
Ga0127464_121750333300010139Grasslands SoilVDPADLLEPAELLGDADPAVDDPAGTLVAAGLGPAGALGENERRMES*
Ga0126319_138639033300010147SoilVAPTDPADLLEPADLLGDADPAVDDPARALVAAALGPAGALGENERRMDS*
Ga0126318_1016064713300010152SoilELLDDADPAIAGPAGALVAAGFGPAAAPGENERRMDS*
Ga0099796_1040018433300010159Vadose Zone SoilAAVVNPVDPTAPVDPAELLEPAEVLGASDPAGAGPARDLVAAGIGPADASGENERRMNS*
Ga0134084_1035547623300010322Grasslands SoilPVAPADPAELLEPAELLGDAEPAVADPAGALVAAGSGPAGALGENERRMDS*
Ga0134111_1048179913300010329Grasslands SoilLDDAYPAVQDSTGALVAAGLGPAGAPGENERRMDS*
Ga0126379_1160157413300010366Tropical Forest SoilELLDPELLDAADAAAGAGALVTSGISPAGAPGENERRMDS*
Ga0137383_1084742533300012199Vadose Zone SoilAVAVPVAPTDPAELLEPAELLGDAEPAVADPVGALVAAGLGPAGALGENERRMDS*
Ga0137363_1068449613300012202Vadose Zone SoilPSPVHRYSFVNVTRAAGLAVPAMEVDPAELLEPAELLGDADPAVDDPAGALVAAGLGPAGALGENERRMES*
Ga0137380_1026722413300012206Vadose Zone SoilGPSPVHRYSFVNVTRAAALAVPVAPTDPADLLEPAELLGDAGPAVDDPAGTLVTAGLGPAGALGENERRMDS*
Ga0137377_1012725313300012211Vadose Zone SoilAALAEHGPSPVHRYSFVNVTRAAALAVPAAPTDPSALLEPAELLDDAYPAVQDPTGALVAAGLGPAGAPGENERRMDS*
Ga0137360_1031533133300012361Vadose Zone SoilAALVGPMAPTDPAELLEPAELLDDADPAGAGQAGALVAAGLGLAAVAEENERRMDS*
Ga0134032_121775313300012376Grasslands SoilNDPANLLEPADLLGDADPAVDDPAGALVAAALGPAGALGENERRMDS*
Ga0134044_103671313300012395Grasslands SoilLLVDTEPAVADPTGALVAAGLGPAGALGENERRMDS*
Ga0134055_104593913300012401Grasslands SoilMIPAEFDYLRASTVDEAVAALAEHGPSPVHRYSFVNVTRVAALAVPGVPADRADLLEPAELLGDADPAVDDSAGALVAAGLGPAGALGENERRMDS*
Ga0134024_100091133300012404Grasslands SoilLAVPVAPADPAELLEPAELLGDAGPAVDDPAGTLVTAGLAPAGALGENERRMDS*
Ga0134041_120550613300012405Grasslands SoilPADLLEPADLLGDAGPAVDDPAGTLVTAGLGPAGALGENERRMDS*
Ga0134050_110126033300012407Grasslands SoilALAEHGPSPVHRYSFVNVTRAAVLAVPAGPEDPAELLEPAELLGDADPAVDDSAGALVAAGLGPAGALGENERRMDS*
Ga0134045_125811633300012409Grasslands SoilALAVPAAPTDPSALLEPAELLDDAYPAVQDSTGALVAAGLGPAGAPGENERRMDS*
Ga0134060_117266323300012410Grasslands SoilLAVPVAPTDPADLLEPADLLGDAGPAVDDPAGTLVTAGLGPAGALGENERRMDS*
Ga0134060_141269533300012410Grasslands SoilGDAEPAVADPAGALVAAGSGPAGALGENERRMDS*
Ga0157320_103960813300012481Arabidopsis RhizosphereADLLEPADLLGDADPAVDDPAGTLVTAGLGPAGALGENERRMDS*
Ga0157318_100465933300012482Arabidopsis RhizosphereDLLGDADPAVDDPAGALVAAALGPAGALGENERRMES*
Ga0157329_100646533300012491Arabidopsis RhizosphereAAALAVPVAPTDPADLLEPADLLGDADPAVDDPAGALVTAGLGPAGALGENERRMES*
Ga0157341_100749713300012494Arabidopsis RhizosphereRAAALAVPVAPADPAELLEPAELLGDADPVVGDPAGTLVTAGLGPAGALGENERRMES*
Ga0157342_100358233300012507Arabidopsis RhizosphereSPVHRYSFVNVTRAAALAVPVAPTDPADLLEPADLLGDADPAVDDPAGALVAAALGPAGALGENERRMES*
Ga0157338_101261013300012515Arabidopsis RhizosphereLAVPVAPADPAELLEPAELLGDADPAVDDPAGTLVTAGLGPAGALGENERRMDS*
Ga0137397_1028490633300012685Vadose Zone SoilPTDPSELLEPAELLDDADPAVQDPAGALVAAGLGPAGALGENERRMDS*
Ga0157302_1021376033300012915SoilAVPVAPADPADLLEPADLLGDADPAVDDPAGALVAAALGPAGALGENERRMES*
Ga0137413_1087062633300012924Vadose Zone SoilAALAVPVAPADPAELLEPAELLGDADPAVDDPAGALVAAGLGPAGALGENERRMDS*
Ga0137410_1078151533300012944Vadose Zone SoilELLEPAELLGDADPAVDDPAGALVAAGLGPAGALGENERRMDS*
Ga0126375_1082123233300012948Tropical Forest SoilAAALLDPVNPVAPADPAELLEPAELLGDVEPTAGPAGDLVAAGFRPVAALGENERRMDS*
Ga0164305_1136614513300012989SoilAAALAVPVAPTDPADLLEPADLLGDADPAVDDLAGALVAAALGPAGALGENERRMES*
Ga0182000_1047535723300014487SoilAEHGPSPVHRYSFVNVTRAAALAVPVAPTDPADLLEPADLLGDADPAVDDPAGALVTAALGLAGALGENERRMES*
Ga0157376_1208812613300014969Miscanthus RhizosphereLAVPVAPTDPADLLEPADLLGDADPAVDDPAVALVAAALGPAGALGENERRMES*
Ga0137412_1039168833300015242Vadose Zone SoilALAVPVAPTDPADLLEPADLPGDADPAVDDPAGALVAAGLGPAGALGENERRMDS*
Ga0187821_1047314523300017936Freshwater SedimentRAEHGPSPVHRYSFVNVNRAAALLNPVDPADLLEPAELPGDADPAIAGPAGALVGAGFGPAAAPGENERRMDS
Ga0187822_1029891623300017994Freshwater SedimentPVHRYSFVNVTRAAVLAVPAVPADPAELLEPAELLGDADPAVDDPAGALVAAGLGPAGALGENERRMDS
Ga0066667_1129300713300018433Grasslands SoilHRYSFVNGTRAAALAVPAVEVDPAELLEPAELLGDADPAVDDPAGALVAAGLGPAGALGENERRMDS
Ga0066662_1165931413300018468Grasslands SoilSPVHRYSFVNVTRAAALAVPAVEVDPAELLEPAELLGDADPAVDDPAGALVAAGLGPAGALGENERRMDS
Ga0193701_104944433300019875SoilRYSFVNVTRAAALAVSVAPADPADLLEPAELLGDAGPAVDDPAGTLVTAGLGPAGALGENERRMDS
Ga0193725_109488433300019883SoilRAAALAVPVAPTDPADLLEPADLLGDADLAVDDPAGALVAAALGPAGALGENERRMES
Ga0206350_1036366813300020080Corn, Switchgrass And Miscanthus RhizosphereAVPVAPTDPADLLEPADLLGDADPAVDDLAGALVAAALGPAGALGENERRMDP
Ga0179592_1047311213300020199Vadose Zone SoilLAVPAMEVDPAELLEPAELLGDADPAVDDPAGALVAAGLGPAGALGENERRMDS
Ga0179958_102065923300021315Vadose Zone SoilAGLAVPVAPADPAELLEPAELLGDADPAVDDPAGTLVTAGLGPAGALGENERRMDS
Ga0193699_1043673213300021363SoilSELLGDAGPAVDDPAGTLVTAGLGPAGALGENERRMDS
Ga0210387_1039740043300021405SoilNPVDPADLLEPAELLGDADPAIAGPAGALVGAGFGPAAAPRENERRMDS
Ga0210387_1130573723300021405SoilAALAEHGPSAVHRYSFVNVTRAAALAVPVAPTDPADLLEPADLLGDADPAVDDPAGALVAAALGPAGALGENERRMES
Ga0210384_1089327733300021432SoilSFVNVTRAAALAVPAAPTDPSELLEPAELLDDADPAVQDPAGALVSAGFGPAGAVGENERRMDS
Ga0210384_1159630413300021432SoilVAPTDPADLLEPADLLGDADPAVDDPVGALVAAALGPAGALGENERRMES
Ga0210410_1146962223300021479SoilRAAVLAIPAGPEDPAELLEPAELLGDADPAVNDPAGALVAAGLGPAGALGENERRMDS
Ga0210409_1037742433300021559SoilAELLEPAELLGDADPAVNDPAGALVAAGLGPAGALGENERRMDS
Ga0126371_1243249533300021560Tropical Forest SoilDLLEPADLLGDADPAIDDPAGALMVAALGPAGALGENERRMES
Ga0222728_110687513300022508SoilALAEHGPSPVHRYSFVNVTRAAGLAVPAVPADPAELLEPAELLGDADPAVDDPAGALVAAGLGPAGALGENERRMDS
Ga0242658_102745333300022530SoilAELLEPAELLGDADPAVNDPARALVAAGLGPAGALGENERRMDS
Ga0242658_112778713300022530SoilEHGPSPVHRYSFVNVTRAAALAVPAMEVDPAELLEPAELLGDADPAVNDPAGALVAAGLGPAGALGENERRMES
Ga0242655_1007077733300022532SoilSELLEPAELLDDADPAVQDPAGALVSAGFGPAGAVGENERRMDS
Ga0242662_1013257333300022533SoilLLEPAGLLADTDPAVDDPAGALVAAALGPAGALGENERRMES
Ga0242665_1004732333300022724SoilATAVMAPEMPADPTELLEPAELPGDADPVVADSLGALVAAGLGPAAAPGENERRMDS
Ga0247694_103006633300024178SoilLLEPADLLGDADPAVDDPAGALVAAALGPAGALGENERRMES
Ga0247695_102640533300024179SoilSFVNVTRAAALAVPVAPTDPADLLEPADLLGDADPAVDDPAGALVAAALGPAGALGENERRMES
Ga0179589_1001419213300024288Vadose Zone SoilAAAALAVPVAPTDPADLLEPADLLDDADPAVDDPAGALVAAALGPAGALGENERRMES
Ga0207660_1117990313300025917Corn RhizosphereADLLEPAHLLGDADPAVDDPAGALVAAALGPAGALGENERRMES
Ga0207646_1060387543300025922Corn, Switchgrass And Miscanthus RhizosphereRAAAQAVPVAPTDPSELLEPAELLDDADPVVEDPAGALVAAGLGPAGALGENERRMDS
Ga0207677_1035660333300026023Miscanthus RhizosphereADLLEPADLLGDADPAVDDPAGALVAAALGPAGALGENERRMES
Ga0207703_1145921413300026035Switchgrass RhizosphereVTRAAALAVPVAPTDPADLLEPADLLGDADPAVDDPAGALVAAALGPAGALGENERRMES
Ga0209473_133487813300026330SoilALLAALAEHGPSPVHRYSFVNVTRAAVLAVPAVPADPAELLEPAELLGDADPAVDDPAGALVAAGLGPAGALGENERRMDS
Ga0209003_107394013300027576Forest SoilVAPTDPADLLEPADLLDDAGPAVDDPAGALVAAALGPAGALGENERRMES
Ga0209074_1013235933300027787Agricultural SoilAALAVPVAPTDPADLLEPADLLGDADPAVDDPAGALVAAALGPAGALGENERRMES
Ga0307290_1025277313300028791SoilAAALAVSVAPADPADLLEPAELLGDAGPAVDDPAGTLVTAGLGPAGALGENERRMDS
Ga0308198_102099233300030904SoilPAELLGDAGPAVDDPAGTLVTAGLGPAGALGENERRMDS
Ga0308196_104874013300030989SoilRAAALAVPVAPADPADLLEPAELLGDAGPAVDNPAGTLVTAGLGPAGALGENERRMES
Ga0308189_1009598433300031058SoilAVPVAPADPADLLEPAELLGDAGPAVDNPAGTLVTAGLGPAGALGENERRMD
Ga0170819_1221353313300031469Forest SoilPVDPAELLEPAGPLDVSDPAGPRPAKAVVAAGIGPAGASGENERRMNS
Ga0318541_1026480433300031545SoilYSFVNVNRVAALLNPADPAAAVDPAELLEPADLPDDADPAIAGPAGALVAAGFGPAAAPGENERRMDS
Ga0318515_1030166413300031572SoilSFVNVNRAAALLEPAELLGDADPVIAGPAGALVAAGFGPAGGPGENERRMDS
Ga0318555_1006589943300031640SoilEHGPSPVHRYSFVNVNRVAALLEPAELLDDADPVIAGPAGALVAAGFGPAGGPGENERRMDS
Ga0318493_1052396633300031723SoilNVNRVAALLNPADPVAAVDPAELLEPADLLGDADPAVAGPAGALVTAGFGPAAAPGENERRMDS
Ga0318492_1022748813300031748SoilVDPVAPVDPAELLEPAGLLGDDEPAVAGPAGDLVAAGFRPAAAPGENERRMDS
Ga0318526_1028841713300031769SoilLLDDADPAIAGPAGALVAAGFGPAAAPGENERRMDS
Ga0318552_1008196443300031782SoilLLEPAELLDDADPVIAGPAGALVAAGFGPAGGPGENERRMDS
Ga0318512_1036841833300031846SoilAVALLNPVDPASAADPAELLGPAELLDDADPAIAGPAGALVAAGFGPAAAPGENERRMDS
Ga0318544_1006777643300031880SoilLDDADPAIAGPAGALVAAGFGPAAAPGENERRMDS
Ga0318551_1015517613300031896SoilLNPVDPASAADPAELLGPAELLDDADPAIAGPAGALVAAGFGPAAAPGENERRMDS
Ga0318556_1003207913300032043SoilAELLDDADPVIAGPAGALVGAGFGPAGAPGENERRMDS
Ga0318505_1012339113300032060SoilLEPAGLLGDDEPAVAGPAGDLVAAGFRPAAAPGENERRMDS
Ga0318553_1037466443300032068SoilGRAGDDEPAVAGPAGDLVAAGFRPVAAPGENERRMDS
Ga0318518_1020719813300032090SoilPAELLEPAELLGDADPAIAGPAGALVAAGFGPAAAPGENERRMDS
Ga0335080_1033417043300032828SoilLGDADPAVDDPAGTLVTAGLGPAGTPGENERRMDS
Ga0335071_1007112343300032897SoilAEHGPSPVHRYSFVNVNRAAALLNSVDPAAVPADLLDPAELLGGADPAIAGPAGALVAAGFGPAGPPGENERRMDS
Ga0335077_1085444743300033158SoilAEHGPSPVHRYSFVNVNRAAALLSPVDPAAAADPAELLEPAELLGDADPAIAGPAGTLVAAGFGLGDAPGENERRMDS
Ga0370541_060106_3_1373300034680SoilADLLEPAELLGDAGPAVDNPAGTLVTAGLGPAGALGENERRMDS

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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