Metagenome Family F073286

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F073286
Family Type	Metagenome
Number of Sequences	120
Average Sequence Length	49 residues
Representative Sequence	MTYPLDLPLWLERAEIAEEQRLAHIAANDLPEDWEPDPEDAAPWWQAD
Number of Associated Samples	55
Number of Associated Scaffolds	120

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	40.83 %
% of genes near scaffold ends (potentially truncated)	30.83 %
% of genes from short scaffolds (< 2000 bps)	76.67 %
Associated GOLD sequencing projects	43
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.51

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Unclassified (87.500 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous (62.500 % of family members)
Environment Ontology (ENVO)	Unclassified (75.833 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (85.833 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 36.84% β-sheet: 0.00% Coil/Unstructured: 63.16%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.51
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.51
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 120 Family Scaffolds
PF05866	RusA	4.17
PF04545	Sigma70_r4	3.33
PF14105	DUF4278	1.67
PF12705	PDDEXK_1	0.83

COG ID	Name	Functional Category	% Frequency in 120 Family Scaffolds
COG4570	Holliday junction resolvase RusA (prophage-encoded endonuclease)	Replication, recombination and repair [L]	4.17

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	87.50 %
All Organisms	root	All Organisms	12.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	87.50 %
Viruses	superkingdom	All Organisms → Viruses	6.67 %
cellular organisms	root	All Organisms → cellular organisms	5.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	87.50 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	5.83 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	5.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	87.50 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	5.83 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	5.00 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	87.50 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	5.83 %
unclassified Proteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria	3.33 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	87.50 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	5.83 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	3.33 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	87.50 %
Kyanoviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae	5.00 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	3.33 %
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	0.83 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	87.50 %
Neritesvirus	genus	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → Neritesvirus	5.00 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	3.33 %
Autographiviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae	0.83 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	87.50 %
Neritesvirus scam8	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → Neritesvirus → Neritesvirus scam8	5.00 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	3.33 %
unclassified Autographiviridae	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → unclassified Autographiviridae	0.83 %
Flavobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	87.50 %
Neritesvirus scam8	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → Neritesvirus → Neritesvirus scam8	5.00 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	3.33 %
Synechococcus phage S-SRP01	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → unclassified Autographiviridae → Synechococcus phage S-SRP01	0.83 %
unclassified Flavobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	87.50 %
Neritesvirus scam8	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → Neritesvirus → Neritesvirus scam8	5.00 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	3.33 %
Flavobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	0.83 %
Synechococcus phage S-SRP01	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → unclassified Autographiviridae → Synechococcus phage S-SRP01	0.83 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001828\|ACM3_1007430	Not Available	2189	Open in IMG/M
3300001831\|ACM4_1011159	Not Available	778	Open in IMG/M
3300006025\|Ga0075474_10237431	Not Available	551	Open in IMG/M
3300006025\|Ga0075474_10251319	Not Available	532	Open in IMG/M
3300006026\|Ga0075478_10085776	Not Available	1012	Open in IMG/M
3300006026\|Ga0075478_10154824	Not Available	714	Open in IMG/M
3300006802\|Ga0070749_10040282	Not Available	2875	Open in IMG/M
3300006802\|Ga0070749_10068510	Not Available	2131	Open in IMG/M
3300006802\|Ga0070749_10075176	Not Available	2021	Open in IMG/M
3300006802\|Ga0070749_10076204	Not Available	2007	Open in IMG/M
3300006802\|Ga0070749_10269343	Not Available	961	Open in IMG/M
3300006802\|Ga0070749_10321364	Not Available	864	Open in IMG/M
3300006802\|Ga0070749_10593576	Not Available	598	Open in IMG/M
3300006810\|Ga0070754_10039086	All Organisms → cellular organisms → Bacteria → Proteobacteria	2586	Open in IMG/M
3300006810\|Ga0070754_10040198	Not Available	2540	Open in IMG/M
3300006810\|Ga0070754_10121413	Not Available	1272	Open in IMG/M
3300006810\|Ga0070754_10131414	Not Available	1211	Open in IMG/M
3300006869\|Ga0075477_10439790	Not Available	504	Open in IMG/M
3300006916\|Ga0070750_10105228	Not Available	1305	Open in IMG/M
3300006916\|Ga0070750_10272317	Not Available	730	Open in IMG/M
3300007344\|Ga0070745_1016086	Not Available	3410	Open in IMG/M
3300007344\|Ga0070745_1040101	Not Available	1967	Open in IMG/M
3300007344\|Ga0070745_1061494	Not Available	1523	Open in IMG/M
3300007346\|Ga0070753_1014792	Not Available	3587	Open in IMG/M
3300007538\|Ga0099851_1053155	Not Available	1588	Open in IMG/M
3300007538\|Ga0099851_1218671	Not Available	689	Open in IMG/M
3300007538\|Ga0099851_1349031	Not Available	517	Open in IMG/M
3300007538\|Ga0099851_1349905	Not Available	516	Open in IMG/M
3300007538\|Ga0099851_1366713	Not Available	500	Open in IMG/M
3300007539\|Ga0099849_1033744	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → Neritesvirus → Neritesvirus scam8	2180	Open in IMG/M
3300007539\|Ga0099849_1055262	Not Available	1644	Open in IMG/M
3300007539\|Ga0099849_1059572	Not Available	1575	Open in IMG/M
3300007539\|Ga0099849_1321520	Not Available	555	Open in IMG/M
3300007539\|Ga0099849_1370149	Not Available	507	Open in IMG/M
3300007540\|Ga0099847_1112865	Not Available	822	Open in IMG/M
3300007541\|Ga0099848_1014520	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → Neritesvirus → Neritesvirus scam8	3427	Open in IMG/M
3300007541\|Ga0099848_1101256	Not Available	1105	Open in IMG/M
3300007541\|Ga0099848_1231923	Not Available	652	Open in IMG/M
3300007542\|Ga0099846_1087964	Not Available	1152	Open in IMG/M
3300007542\|Ga0099846_1147521	Not Available	847	Open in IMG/M
3300007542\|Ga0099846_1283163	Not Available	570	Open in IMG/M
3300007960\|Ga0099850_1017570	Not Available	3191	Open in IMG/M
3300007960\|Ga0099850_1053421	Not Available	1720	Open in IMG/M
3300007960\|Ga0099850_1171804	Not Available	864	Open in IMG/M
3300007960\|Ga0099850_1192152	Not Available	806	Open in IMG/M
3300007960\|Ga0099850_1254925	Not Available	675	Open in IMG/M
3300007960\|Ga0099850_1304031	Not Available	605	Open in IMG/M
3300007960\|Ga0099850_1378724	Not Available	526	Open in IMG/M
3300008012\|Ga0075480_10073182	Not Available	1962	Open in IMG/M
3300008012\|Ga0075480_10287793	Not Available	838	Open in IMG/M
3300009124\|Ga0118687_10157133	Not Available	814	Open in IMG/M
3300010296\|Ga0129348_1186883	Not Available	708	Open in IMG/M
3300010296\|Ga0129348_1188486	Not Available	704	Open in IMG/M
3300010296\|Ga0129348_1294034	Not Available	542	Open in IMG/M
3300010297\|Ga0129345_1209484	Not Available	689	Open in IMG/M
3300010297\|Ga0129345_1293478	Not Available	564	Open in IMG/M
3300010299\|Ga0129342_1049826	Not Available	1646	Open in IMG/M
3300010299\|Ga0129342_1059408	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1483	Open in IMG/M
3300010299\|Ga0129342_1059650	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1480	Open in IMG/M
3300010299\|Ga0129342_1083239	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1215	Open in IMG/M
3300010299\|Ga0129342_1127821	Not Available	939	Open in IMG/M
3300010299\|Ga0129342_1171481	Not Available	782	Open in IMG/M
3300010300\|Ga0129351_1221049	Not Available	730	Open in IMG/M
3300010318\|Ga0136656_1007476	Not Available	3954	Open in IMG/M
3300010354\|Ga0129333_10083875	Not Available	2951	Open in IMG/M
3300010354\|Ga0129333_11223009	Not Available	623	Open in IMG/M
3300010370\|Ga0129336_10189396	Not Available	1175	Open in IMG/M
3300010389\|Ga0136549_10126004	Not Available	1175	Open in IMG/M
3300010389\|Ga0136549_10221935	Not Available	813	Open in IMG/M
3300017951\|Ga0181577_10025374	All Organisms → Viruses	4313	Open in IMG/M
3300017951\|Ga0181577_10046678	Not Available	3094	Open in IMG/M
3300017951\|Ga0181577_10321877	Not Available	1000	Open in IMG/M
3300017951\|Ga0181577_10698678	Not Available	617	Open in IMG/M
3300017967\|Ga0181590_10645572	Not Available	719	Open in IMG/M
3300018421\|Ga0181592_10108903	Not Available	2147	Open in IMG/M
3300018424\|Ga0181591_10077243	Not Available	2755	Open in IMG/M
3300019756\|Ga0194023_1127766	Not Available	519	Open in IMG/M
3300021958\|Ga0222718_10032140	Not Available	3499	Open in IMG/M
3300021960\|Ga0222715_10256700	Not Available	1014	Open in IMG/M
3300021960\|Ga0222715_10424897	Not Available	721	Open in IMG/M
3300021960\|Ga0222715_10519543	Not Available	629	Open in IMG/M
3300021962\|Ga0222713_10184340	Not Available	1410	Open in IMG/M
3300022071\|Ga0212028_1038750	Not Available	881	Open in IMG/M
3300022187\|Ga0196899_1018978	Not Available	2557	Open in IMG/M
3300023116\|Ga0255751_10252573	Not Available	948	Open in IMG/M
3300025610\|Ga0208149_1021831	Not Available	1819	Open in IMG/M
3300025646\|Ga0208161_1032483	Not Available	1823	Open in IMG/M
3300025646\|Ga0208161_1051929	Not Available	1305	Open in IMG/M
3300025671\|Ga0208898_1035012	Not Available	1996	Open in IMG/M
3300025671\|Ga0208898_1127602	All Organisms → cellular organisms → Bacteria → Proteobacteria	723	Open in IMG/M
3300025674\|Ga0208162_1011310	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → Neritesvirus → Neritesvirus scam8	3722	Open in IMG/M
3300025674\|Ga0208162_1011806	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → Neritesvirus → Neritesvirus scam8	3626	Open in IMG/M
3300025674\|Ga0208162_1027025	Not Available	2137	Open in IMG/M
3300025674\|Ga0208162_1064580	Not Available	1177	Open in IMG/M
3300025674\|Ga0208162_1081509	Not Available	1000	Open in IMG/M
3300025674\|Ga0208162_1128006	Not Available	720	Open in IMG/M
3300025674\|Ga0208162_1135842	Not Available	689	Open in IMG/M
3300025674\|Ga0208162_1200878	Not Available	506	Open in IMG/M
3300025687\|Ga0208019_1002129	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	10120	Open in IMG/M
3300025687\|Ga0208019_1008697	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → Neritesvirus → Neritesvirus scam8	4456	Open in IMG/M
3300025687\|Ga0208019_1095699	Not Available	920	Open in IMG/M
3300025687\|Ga0208019_1194270	Not Available	535	Open in IMG/M
3300025771\|Ga0208427_1039692	Not Available	1773	Open in IMG/M
3300025840\|Ga0208917_1161797	Not Available	770	Open in IMG/M
3300025853\|Ga0208645_1283594	Not Available	530	Open in IMG/M
3300025889\|Ga0208644_1041934	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → Neritesvirus → Neritesvirus scam8	2620	Open in IMG/M
3300025889\|Ga0208644_1340091	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → unclassified Autographiviridae → Synechococcus phage S-SRP01	577	Open in IMG/M
3300027917\|Ga0209536_100746550	Not Available	1214	Open in IMG/M
3300031539\|Ga0307380_10736319	Not Available	825	Open in IMG/M
3300031565\|Ga0307379_10811806	Not Available	823	Open in IMG/M
3300031565\|Ga0307379_11348298	Not Available	580	Open in IMG/M
3300031566\|Ga0307378_10381184	Not Available	1302	Open in IMG/M
3300031566\|Ga0307378_10889204	Not Available	739	Open in IMG/M
3300031963\|Ga0315901_11116541	Not Available	541	Open in IMG/M
3300034012\|Ga0334986_0136896	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1427	Open in IMG/M
3300034012\|Ga0334986_0156795	Not Available	1308	Open in IMG/M
3300034012\|Ga0334986_0171862	Not Available	1233	Open in IMG/M
3300034374\|Ga0348335_020198	Not Available	3233	Open in IMG/M
3300034375\|Ga0348336_088111	Not Available	1096	Open in IMG/M
3300034418\|Ga0348337_011860	Not Available	4946	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	95.83%
Terrestrial	Environmental → Terrestrial	4.17%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	89.17%
Freshwater	Environmental → Aquatic → Freshwater	4.17%
Soil	Environmental → Terrestrial → Soil	4.17%
Sediment	Environmental → Aquatic → Sediment	2.50%

Habitat	Taxonomy	Distribution
Coastal	Environmental → Aquatic → Marine → Coastal	75.83%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	6.67%
Unclassified	Environmental → Aquatic → Marine → Unclassified	4.17%
Clay	Environmental → Terrestrial → Soil → Clay	4.17%
Lake	Environmental → Aquatic → Freshwater → Lake	2.50%
Oceanic	Environmental → Aquatic → Marine → Oceanic	2.50%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.50%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	0.83%
River	Environmental → Aquatic → Freshwater → River	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	75.83%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	6.67%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	4.17%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	4.17%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	2.50%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.50%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	1.67%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	0.83%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	0.83%
Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment	0.83%

Habitat	Taxonomy	Distribution
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	62.50%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	13.33%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	6.67%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	4.17%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	4.17%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	2.50%
Marine Plankton	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine Plankton	1.67%
Marine Methane Seep Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Marine Methane Seep Sediment	1.67%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	0.83%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	0.83%
Marine Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment → Marine Sediment	0.83%
Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment	0.83%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001828	Marine plankton microbial communities from the Amazon River plume, Atlantic Ocean - ACM3, ROCA_DNA076_2.0um_10f	Environmental	Open in IMG/M
3300001831	Marine plankton microbial communities from the Amazon River plume, Atlantic Ocean - ACM4, ROCA_DNA074_0.2um_10l	Environmental	Open in IMG/M
3300006025	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_DNA	Environmental	Open in IMG/M
3300006026	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_DNA	Environmental	Open in IMG/M
3300006802	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18	Environmental	Open in IMG/M
3300006810	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01	Environmental	Open in IMG/M
3300006869	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_>0.8_DNA	Environmental	Open in IMG/M
3300006916	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24	Environmental	Open in IMG/M
3300007344	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4	Environmental	Open in IMG/M
3300007346	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31	Environmental	Open in IMG/M
3300007538	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaG	Environmental	Open in IMG/M
3300007539	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaG	Environmental	Open in IMG/M
3300007540	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG	Environmental	Open in IMG/M
3300007541	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG	Environmental	Open in IMG/M
3300007542	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG	Environmental	Open in IMG/M
3300007960	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1D Viral MetaG	Environmental	Open in IMG/M
3300008012	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_<0.8_DNA	Environmental	Open in IMG/M
3300009124	Marine sediment microbial communities from methane seeps within Hudson Canyon, US Atlantic Margin - Hudson Canyon PC-16 72 cmbsf	Environmental	Open in IMG/M
3300010296	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.8_DNA	Environmental	Open in IMG/M
3300010297	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_20_0.8_DNA	Environmental	Open in IMG/M
3300010299	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_15_0.2_DNA	Environmental	Open in IMG/M
3300010300	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.2_DNA	Environmental	Open in IMG/M
3300010318	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_15_0.8_DNA	Environmental	Open in IMG/M
3300010354	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_DNA	Environmental	Open in IMG/M
3300010370	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.2_DNA	Environmental	Open in IMG/M
3300010389	Marine sediment microbial communities from methane seeps within Baltimore Canyon, US Atlantic Margin - Baltimore Canyon MUC-11 12-14 cmbsf	Environmental	Open in IMG/M
3300017951	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101413BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017967	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071411BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018421	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018424	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300019756	Freshwater microbial communities from the Broadkill River, Lewes, Delaware, United States ? IW6Sep16_MG	Environmental	Open in IMG/M
3300021958	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_27D	Environmental	Open in IMG/M
3300021960	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_9D	Environmental	Open in IMG/M
3300021962	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_649D	Environmental	Open in IMG/M
3300022071	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (v2)	Environmental	Open in IMG/M
3300022187	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (v3)	Environmental	Open in IMG/M
3300023116	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412BT metaG	Environmental	Open in IMG/M
3300025610	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025646	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG (SPAdes)	Environmental	Open in IMG/M
3300025671	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4 (SPAdes)	Environmental	Open in IMG/M
3300025674	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaG (SPAdes)	Environmental	Open in IMG/M
3300025687	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1D Viral MetaG (SPAdes)	Environmental	Open in IMG/M
3300025771	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025840	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025853	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (SPAdes)	Environmental	Open in IMG/M
3300025889	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18 (SPAdes)	Environmental	Open in IMG/M
3300027917	Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-2-8_12 (SPAdes)	Environmental	Open in IMG/M
3300031539	Soil microbial communities from Risofladan, Vaasa, Finland - UN-3	Environmental	Open in IMG/M
3300031565	Soil microbial communities from Risofladan, Vaasa, Finland - UN-2	Environmental	Open in IMG/M
3300031566	Soil microbial communities from Risofladan, Vaasa, Finland - UN-1	Environmental	Open in IMG/M
3300031963	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA116	Environmental	Open in IMG/M
3300034012	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME18Aug2017-rr0027	Environmental	Open in IMG/M
3300034374	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31 (v4)	Environmental	Open in IMG/M
3300034375	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30 (v4)	Environmental	Open in IMG/M
3300034418	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28 (v4)	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ACM3_10074303	3300001828	Marine Plankton	VTYPLDLPLWLERAEIAEEQRLAHIDANDLPEDWEPDPEDAAPWWRQPD*
ACM4_10111592	3300001831	Marine Plankton	RNPPGWRPSLRLGALPVTYPLDLPLWLERAEIAEEQRLAHIDANDLPEDWEPDPEDAAPWWRQPD*
Ga0075474_102374311	3300006025	Aqueous	VTYPLDLPLWLERAEVAEEQRLAHIAEHELPDDWQPDPE
Ga0075474_102513191	3300006025	Aqueous	APANRQSQTAPMTYPLDLPLWLERAEAAEEQRLAHIAAHDLPEDWEPDPEDAAPWWQAD*
Ga0075478_100857762	3300006026	Aqueous	LPVTYPLDLPLWLERAEIAEEQRLAHIAANDLPEDWEPDPEDAAPWWQAD*
Ga0075478_101548241	3300006026	Aqueous	MTYPLDLPLWLERAELAEEQRLAHIAANDLPEDWEPDPEDAAPWWQAD*
Ga0070749_100402828	3300006802	Aqueous	VTYPLDLPLWLERSEIAEEQRLQHIAEHDLPDDWQPDPEDTAPWWRTD*
Ga0070749_100685105	3300006802	Aqueous	MHPIDVPLWLEREEIAEEERAAFIAGNDLPEDWQPDPEDLKSW*
Ga0070749_100751764	3300006802	Aqueous	LPVTYPLDLPLWLERAEVAEEQRLAHIAEHELPDDWQPDPEDAAPWWLAD*
Ga0070749_100762045	3300006802	Aqueous	MTYPLDLPLWLERAELAEEQRLAHIAANDLPEDWEPD
Ga0070749_102693434	3300006802	Aqueous	LGLQRTGWNPPGWRPSFRFGTLPVTYPLDLPLWLERAEIAEEQRLAHIDANDLPEDWEPDPEDAAPWWLAD*
Ga0070749_103213642	3300006802	Aqueous	VTYPLDLPLWLERAEVAEEQRLQHIAANDLPEDWEPDPEDAAPWWLAD*
Ga0070749_105935762	3300006802	Aqueous	MHPIDVPLWLEREEIAGEERAVFIAAHDLPEDWQPDPEDLEPWWLSSEP*
Ga0070754_100390862	3300006810	Aqueous	MTYPLDVPLWLERAELAEEQRLAHIAANDLPDDWQPDPEDAAPWWQAD*
Ga0070754_100401983	3300006810	Aqueous	VTYPLDLPLWLERAEIAEEQRLAHIAANDLPEDWEPDPEDAAPWWQAD*
Ga0070754_101214135	3300006810	Aqueous	MTYPLDLPLWLERAEVAEEQRLQHIAANDLPEDWEPDPEDAAPWWLAD*
Ga0070754_101314142	3300006810	Aqueous	LATARASANRKPQTAPVTYPLDLPLWLERSEIAEEQRLQHIAEHDLPDDWQPDPEDAAPWWRTD*
Ga0075477_104397901	3300006869	Aqueous	MTYPLDVPLWLERAELAEEKRLAHIAANDLPDDWQPDPEDAAPWWQAD*
Ga0070750_101052283	3300006916	Aqueous	GFQRTGRNPPGWRPSLRSRALPMTYPLDLPLWLERAEVAEEQRLQHIAANDLPEDWEPDPEDAAPWWQAD*
Ga0070750_102723172	3300006916	Aqueous	MTYPLDLPLWLERAEIAEEQRLAHIAANDLPEDWEPDPEDAAPWWRAD*
Ga0070745_10160864	3300007344	Aqueous	MTYPLDLPLWLERAEAAEEQRLAHIAANDLPEDWEPDPEDAAPWWQAD*
Ga0070745_10401013	3300007344	Aqueous	MTYPLDVLLWLERAELAEEQRLAHIAANDLPDDWQPDPEDAAPWWQAD*
Ga0070745_10614943	3300007344	Aqueous	MTYPLDLPLWLGRAEVAEDQRLQHIAANDLPEDWEPDSEDAAPWWLAD*
Ga0070753_10147922	3300007346	Aqueous	MTYPLDLPLWLERAEAAEEQRLAHIAAHDLPEDWEPDPEDAAPWWQAD*
Ga0099851_10531552	3300007538	Aqueous	MTYPLDVPLWLERSEIAEEQRLAHIAAYGLPDDWEPDPEDAAPWWQAD*
Ga0099851_12186713	3300007538	Aqueous	MMPPIDLPLWLERAEIAEEQRQAHVAANDLPEDWHPDPEDLEPWWLPVDF*
Ga0099851_13490312	3300007538	Aqueous	TGWNPPGWRPSLRFGTLPVTYPLDLPLWLERAEIAEEQRLAHIAANDLPEDWEPDPEDAAPWWRAD*
Ga0099851_13499051	3300007538	Aqueous	MTYPIDVPLWLERAETAEEQRLQHIAEHDLPDDWQPDPEDAAP
Ga0099851_13667131	3300007538	Aqueous	MMPPIDLPLWLERAEIAEEQRQAHIAANDLPEDWHPDPEDLEPWW
Ga0099849_10337442	3300007539	Aqueous	MTYPLDVPLWLERAEITEEQRLAHIAAYGLPDDWQPDPEDAAPWWQAD*
Ga0099849_10552622	3300007539	Aqueous	MTYPLDMPLWLERAELAEEQRLAHIAANDLPEDWEPDPEDAAPWWQAD*
Ga0099849_10595721	3300007539	Aqueous	VTYPLDLPLWLERAEIAEEQRLAHIAANDLPEDWEPDPEDAAPWWRAD*
Ga0099849_13215202	3300007539	Aqueous	MTYPLDLPLWLERAEVAEEQRLAHIAANDLPEDWEPDPEDAAPWWQAD*
Ga0099849_13701491	3300007539	Aqueous	MTYPLDVPLWLERAETAEEQRLAHIAAHGLPDDWEPDPEDAAPWWQAD*
Ga0099847_11128652	3300007540	Aqueous	MTYPLDMPLWLERAELAEEQRLAYIAANGLPDDWEPDPEDAAPWWRAD*
Ga0099848_10145206	3300007541	Aqueous	MMPLDLPLWLEREEIAEEERAAFIAEHDLPEDWQPDPEDLESWWFSSEP*
Ga0099848_11012561	3300007541	Aqueous	PLWLERAEIAEEQRQAHVAANDLPEDWHPDPEDLEPWWLPVDF*
Ga0099848_12319231	3300007541	Aqueous	MTPPIDLPLWLERAEIAEEQRQAHIVANNLPEDWHPDPEDLEPWWLAD*
Ga0099846_10879644	3300007542	Aqueous	MTYPLDVPLWLERAETAEEQRLAHIAANGLPDDWQPDPEDAAPWWQAD*
Ga0099846_11475212	3300007542	Aqueous	MTPPIDLPLWLERAEIAEEQRQAHIVANDLPEDWHPDPEDLEPWWLPVDF*
Ga0099846_12831631	3300007542	Aqueous	RSREASLMHPIDVPLWLEREEIAEEERAAFIAEHDLPEDWQPDPEDLESWWFSSEP*
Ga0099850_10175704	3300007960	Aqueous	VTYPLDLPLWLERAEVAEEQRLAHIAANNLPEDWEPDPEDAAPWWRAD*
Ga0099850_10534214	3300007960	Aqueous	LPVTYPLDLPLWLERAEIAEEQRLAHIAANDLLEDWEPDPEDAAPWWRAD*
Ga0099850_11718044	3300007960	Aqueous	MMPLDLPLWLEREEIAEEERAACIAEHDLPEDWQADPEDLESWWLSSE
Ga0099850_11921524	3300007960	Aqueous	VTYPLDVPLWLERAEIAEEQRLAHIAANNLPEDWEPDPEDAAP
Ga0099850_12549251	3300007960	Aqueous	VTYPLDVPLWLERAETAEEQRLQHIAEHDLPDDWQPDPEDAAPWWRAD*
Ga0099850_13040313	3300007960	Aqueous	VTYPLDLPLWLERTETAEEQRLAHIAANGLPDDWEPDPED
Ga0099850_13787241	3300007960	Aqueous	PIDLPLWLERAEIAEEQRQAHIVANDLPEDWHPDPEDLEPWWLAD*
Ga0075480_100731821	3300008012	Aqueous	MTYPLDLPLWLERAEAAEEQRLAHIAANDLPEDWEPDPEDAAPWW
Ga0075480_102877932	3300008012	Aqueous	LWLERAELAEEQRLAHIAANDLPDDWQPDPEDAAPWWQAD*
Ga0118687_101571332	3300009124	Sediment	MTYPLDLPLWLERAELAEEQRLAHIAANDLPDDWQPDPEDAAPWWLAD*
Ga0129348_11868834	3300010296	Freshwater To Marine Saline Gradient	VTYPLDLPLWLERAEIAEEQRLAHIAANDLPEDWEPDPED
Ga0129348_11884862	3300010296	Freshwater To Marine Saline Gradient	MAYPLDLPLWLERAELAEEQRLAHIAANDLPEDWEPDPEDAAPWWQAD*
Ga0129348_12940342	3300010296	Freshwater To Marine Saline Gradient	MTYPLDLPLWLERAEVAEEQRLQHIAANNLPEDWEPDPEDAAPWWLAD*
Ga0129345_12094842	3300010297	Freshwater To Marine Saline Gradient	MTYPLDMPLWLERSEIAEEQRLAHIAAYGLPDDWQPDQEDAAPWWQAD*
Ga0129345_12934781	3300010297	Freshwater To Marine Saline Gradient	SHFRFRALPVTYPLDLPLWLERPETAEEQRLAHIAANGLPDDWEPDPEDAAPWWQAD*
Ga0129342_10498264	3300010299	Freshwater To Marine Saline Gradient	MTYPLDVPLWLERSEIAEEQRLQHIAANGLPDDWEPDPEDAAPWWQAD*
Ga0129342_10594082	3300010299	Freshwater To Marine Saline Gradient	VTYPIDVPLWLERAEIAEEQRLAHIAAYGLPDDWQPDPEDAAPWWQAD*
Ga0129342_10596503	3300010299	Freshwater To Marine Saline Gradient	VTYPLDVPLWLERAETAEEQRLAHIAAYGLPDDWEPDPEDAAPWWQAD*
Ga0129342_10832391	3300010299	Freshwater To Marine Saline Gradient	TYPLDVPLWLERSEIAEEQRLAHIAANDLPEDWEPDPEDAAPWWLAD*
Ga0129342_11278212	3300010299	Freshwater To Marine Saline Gradient	VTYPLDVPLWLERAETAEEQRLAHIAAYGLPDDWEPDPEDTAPWWQAD*
Ga0129342_11714811	3300010299	Freshwater To Marine Saline Gradient	MSYPLDLPLWLERAEIAEEQRLQHIAEHDLPEDWEPDPEDAAPWWRAD*
Ga0129351_12210493	3300010300	Freshwater To Marine Saline Gradient	LPVTYPLDLPLWLERAEIAEEQRLAHIAEHDLPDDWQPDPEDAAPWWRAD*
Ga0136656_10074765	3300010318	Freshwater To Marine Saline Gradient	VTYPLDLPLWLERAEVAEEQRLAHIAEHDLPDDWQPDPEDAAPWWRAD*
Ga0129333_100838753	3300010354	Freshwater To Marine Saline Gradient	MTPPIDLPLWLERAEIAEEQRQAHVAANDLPEDWHPDPEDLEPWWLPVDF*
Ga0129333_112230091	3300010354	Freshwater To Marine Saline Gradient	MMPPIDLPLWLERAEIAEEQRQAHVAANDLPEDWHPDPEDLEPWWLAD*
Ga0129336_101893962	3300010370	Freshwater To Marine Saline Gradient	MTPPIDLPLWLERAEIAEEQRQAHIVANNLPEDWHPDPEDLEPWWLPLDF*
Ga0136549_101260042	3300010389	Marine Methane Seep Sediment	MTYPLDVPLWLERAEVAEEQRLAHIAANNLPEDWEPDPEDSAPWWRAD*
Ga0136549_102219352	3300010389	Marine Methane Seep Sediment	MTYPLDMPLWLERAELAEEQRLAHIAANDLPDDWEPDPEDLEPWWLMQDL*
Ga0181577_100253746	3300017951	Salt Marsh	MTYPLDLPLWLERAEIAEEQRQAHIFEHDLPDDWQPDPEDAAPWWRAD
Ga0181577_100466784	3300017951	Salt Marsh	MTYPLDLPLWLERAEIAEEQRQAHIDANDLPEDWEPDPEDAAPWWRAD
Ga0181577_103218772	3300017951	Salt Marsh	VTYPLDMPLWLERAELAEEQRLAHIAANDLPEDWQPDPEDAAPWWQAD
Ga0181577_106986782	3300017951	Salt Marsh	PLWLERAELAEEQRLAHIAANDLPEDWEPDPEDAAPWWLAD
Ga0181590_106455722	3300017967	Salt Marsh	MAYPLDLPLWLERAELAEEQRLAHIAANDLPEDWEPDPEDAAPWWQAD
Ga0181592_101089034	3300018421	Salt Marsh	MTYPLDLPLWLERAELAEEQRLAHIAANDLPEDWEPDPEDAAPWWQAD
Ga0181591_100772435	3300018424	Salt Marsh	MTYPLDLPLWLERAELAEEQRLAHIAANDLPDDWQPDPEDAAPWWQAD
Ga0194023_11277663	3300019756	Freshwater	LPVTYPLDLPLWLERAEVAEEQRLQHIAEHDLPDDWQPDPEDAAPWWLAD
Ga0222718_100321406	3300021958	Estuarine Water	MTYPLDLPLWLERAEIAQEQRLAHIAENDLPDDWQPDPEDAAPWWQAD
Ga0222715_102567002	3300021960	Estuarine Water	MMPLDLPLWLEREEIAGEERAAFIAAHDLPDDWQPDPEDLEPWWLSSEP
Ga0222715_104248972	3300021960	Estuarine Water	VTYPLDVPLWLERSEIAEEQRLAHIAAYGLPDDWEPDPEDSAPWWQAD
Ga0222715_105195431	3300021960	Estuarine Water	MTYPLDLPLWLERAEVAEEQRQAHIAAHDLPDDWQPDPEDAAPWWQAD
Ga0222713_101843402	3300021962	Estuarine Water	MHPIDVPLWLEREEIAGEERAAFIAAHDLPDDWQPDPEDLEPWWLSSEP
Ga0212028_10387502	3300022071	Aqueous	RPLWLERAEIAEEQRLAHIAANDLPEDWEPDPEDAAPWWQAD
Ga0196899_10189785	3300022187	Aqueous	VTYPLDLPLWLERAEIAEEQRLAHIAANDLPEDWEPDPEDAAPWWQAD
Ga0255751_102525734	3300023116	Salt Marsh	MTYPLDLPLWLERAELAEEQRLAHIAANDLPEDWEPDP
Ga0208149_10218311	3300025610	Aqueous	MTYPLDLPLWLERAELAEEQRLAHIAANDLPEDWEPDPEDA
Ga0208161_10324833	3300025646	Aqueous	MMPLDLPLWLEREEIAEEERAAFIAEHDLPEDWQPDPEDLESWWFSSEP
Ga0208161_10519292	3300025646	Aqueous	MTYPLDLPLWLERAEVAEEQRLQHIAEHDLPDDWQPDPEDAAPWWRAD
Ga0208898_10350123	3300025671	Aqueous	MTYPLDVPLWLERAELAEEQRLAHIAANDLPDDWQPDPEDAAPWWQAD
Ga0208898_11276022	3300025671	Aqueous	TYPLDLPLWLERAEVAEEQRLQHIAANDLPDDWQPDPENAAPWWQAD
Ga0208162_10113104	3300025674	Aqueous	MTYPLDVPLWLERSEIAEEQRLAHIAANDLPEDWEPDPEDAAPWWLAD
Ga0208162_10118063	3300025674	Aqueous	MTYPLDVPLWLERAEITEEQRLAHIAAYGLPDDWQPDPEDAAPWWQAD
Ga0208162_10270251	3300025674	Aqueous	VTYPLDLPLWLERAEVAEEQRLQHIAEHDLPDDWQPDPEDAAPWWLAD
Ga0208162_10645802	3300025674	Aqueous	MTYPLDMPLWLERAELAEEQRLAHIAANDLPEDWEPDPEDAAPWWQAD
Ga0208162_10815094	3300025674	Aqueous	VTYPLDLPLWLERAEVAEEQRLQHIAEHDLPDDWQPDPEDAAPWWRAD
Ga0208162_11280061	3300025674	Aqueous	MSYPLDLPIWLERAEVAEEQRLAHIAANDLPEDWEPDPEDAAPWWRAD
Ga0208162_11358423	3300025674	Aqueous	PPGWRPSLRFGTLPVTYPLDLPLWLERAEIAEEQRLAHIAANDLPEDWEPDPEDAAPWWRAD
Ga0208162_12008782	3300025674	Aqueous	MTYPLDLPLWLERAEVAEEQRLAHIAANDLPEDWEPDPEDAAPWWQAD
Ga0208019_100212921	3300025687	Aqueous	VTYPLDLPLWLERAEVAEEQRLAHIAANNLPEDWEPDPEDAAPWWRAD
Ga0208019_10086972	3300025687	Aqueous	MTYPLDVPLWLERSEIAEEQRLAHIAAYGLPDDWEPDPEDAAPWWQAD
Ga0208019_10956992	3300025687	Aqueous	GVAPICPLRTLPVTYPLDLPLWLERAEIAEEQRLAHIAANDLLEDWEPDPEDAAPWWRAD
Ga0208019_11942701	3300025687	Aqueous	VTYPLDVPLWLERAEIAEEQRLAHIAANNLPEDWEPDPEDAAPWWLAD
Ga0208427_10396923	3300025771	Aqueous	VTYPLDLPLWLERAEVAEEQRLAHIAEHELPDDWQPDPEDAAPWWLAD
Ga0208917_11617971	3300025840	Aqueous	GWRPSLRSRALPMTYPLDLPLWLERAEVAEEQRLQHIAANDLPEDWEPDPEDAAPWWLAD
Ga0208645_12835942	3300025853	Aqueous	LPLWLERAEAAEEQRLAHIAANDLPEDWEPDPEDAAPWWQAD
Ga0208644_10419347	3300025889	Aqueous	MHPIDVPLWLEREEIAEEERAAFIAGNDLPEDWQPDPEDLKSW
Ga0208644_13400911	3300025889	Aqueous	MHPIDVPLWLEREEIAGEERAVFIAAHDLPEDWQPDPEDLEPWWLSSEP
Ga0209536_1007465504	3300027917	Marine Sediment	MTYPLDLPLWLERAEVAEEQRLQHIAEHDLPDDWQPDPEDAAPWWLAD
Ga0307380_107363192	3300031539	Soil	RPFVRSRALPVTYPLDLPLWLERAEIAEEQRLAHIAANDLPEDWEPDPEDAAPWWLAD
Ga0307379_108118063	3300031565	Soil	LDLPLWLERAEIAEEQRLAHIAANDLPEDWEPDPEDAAPWWRAD
Ga0307379_113482983	3300031565	Soil	MTYPLDVPLWLERAETAEEQRLAHIAANGLPDDWEPDPEDAAPWW
Ga0307378_103811843	3300031566	Soil	VTYPLDVPLWLERAEIAEEQRLAHIAANDLPEDWEPDPEDAAPWWRAD
Ga0307378_108892041	3300031566	Soil	MTYPLDVPLWLERAEIAEEQRLARIAADGLPDDWEPDPEDAAPWWQAD
Ga0315901_111165411	3300031963	Freshwater	MMPLDLPLWFEREEIAGEERAAFIAENDLPEDWQPDPEDLESWWFSSEP
Ga0334986_0136896_976_1128	3300034012	Freshwater	MNAPLDLPLWLERLETFEEWRQDFTDANGLPEDWQPDPEDVATWWQSPDL
Ga0334986_0156795_821_973	3300034012	Freshwater	MNAPLDLPLWLERLETFEEWRQDFIDANGLPEDWQPDPEDVAPWWQSPDL
Ga0334986_0171862_832_984	3300034012	Freshwater	MNAPLDLPLWLERLETFEEWRQDFTDANGLPEDWQPDSEDVAPWWQFPDL
Ga0348335_020198_1657_1803	3300034374	Aqueous	MTYPLDLPLWLERAEIAEEQRLAHIAANDLPEDWEPDPEDAAPWWQAD
Ga0348336_088111_3_182	3300034375	Aqueous	WRPFIRLGTLPVTYPLDLPLWLERAEIAEEQRLQHIAANDLPDDWQPDTEDAAPWWRAD
Ga0348337_011860_1421_1567	3300034418	Aqueous	MTYPLDLPLWLERAEAAEEQRLAHIAANDLPEDWEPDPEDAAPWWQAD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F073286

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences