Metagenome / Metatranscriptome Family F072995

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F072995
Family Type	Metagenome / Metatranscriptome
Number of Sequences	120
Average Sequence Length	46 residues
Representative Sequence	YMVYEIDRRRRKLHDLFDVLGGEDAELTAGLVGMVESGELQPYAGATLA
Number of Associated Samples	82
Number of Associated Scaffolds	120

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.91 %
% of genes near scaffold ends (potentially truncated)	90.00 %
% of genes from short scaffolds (< 2000 bps)	80.00 %
Associated GOLD sequencing projects	75
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.38

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (80.833 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (55.000 % of family members)
Environment Ontology (ENVO)	Unclassified (70.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (55.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 46.75% β-sheet: 0.00% Coil/Unstructured: 53.25%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.38
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.38
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 120 Family Scaffolds
PF00122	E1-E2_ATPase	19.17
PF00106	adh_short	0.83
PF13565	HTH_32	0.83
PF07592	DDE_Tnp_ISAZ013	0.83
PF00329	Complex1_30kDa	0.83
PF01028	Topoisom_I	0.83
PF13714	PEP_mutase	0.83
PF00571	CBS	0.83
PF00589	Phage_integrase	0.83
PF00300	His_Phos_1	0.83

COG ID	Name	Functional Category	% Frequency in 120 Family Scaffolds
COG0474	Magnesium-transporting ATPase (P-type)	Inorganic ion transport and metabolism [P]	19.17
COG2216	K+ transport ATPase, ATPase subunit KdpB	Inorganic ion transport and metabolism [P]	19.17
COG2217	Cation-transporting P-type ATPase	Inorganic ion transport and metabolism [P]	19.17
COG0852	NADH:ubiquinone oxidoreductase 27 kD subunit (chain C)	Energy production and conversion [C]	0.83
COG3262	Ni,Fe-hydrogenase III component G	Energy production and conversion [C]	0.83
COG3569	DNA topoisomerase IB	Replication, recombination and repair [L]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	80.83 %
Unclassified	root	N/A	19.17 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	80.83 %
Unclassified	root	N/A	19.17 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	80.83 %
Unclassified	root	N/A	19.17 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	78.33 %
Unclassified	root	N/A	19.17 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.83 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	64.17 %
Unclassified	root	N/A	19.17 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	8.33 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	62.50 %
Unclassified	root	N/A	19.17 %
Methylococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales	7.50 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1.67 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.83 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	62.50 %
Unclassified	root	N/A	19.17 %
Methylococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	6.67 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.83 %
Azospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae	0.83 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.83 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	62.50 %
Unclassified	root	N/A	19.17 %
Methylomagnum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylomagnum	1.67 %
Azospirillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum	0.83 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.83 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.83 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	62.50 %
Unclassified	root	N/A	19.17 %
Methylomagnum ishizawai	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylomagnum → Methylomagnum ishizawai	1.67 %
Azospirillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum	0.83 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.83 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004152\|Ga0062386_101644780	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	536	Open in IMG/M
3300004633\|Ga0066395_10836202	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	554	Open in IMG/M
3300004635\|Ga0062388_102476089	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	544	Open in IMG/M
3300005186\|Ga0066676_10897760	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylomagnum → Methylomagnum ishizawai	595	Open in IMG/M
3300005332\|Ga0066388_101635153	All Organisms → cellular organisms → Bacteria → Proteobacteria	1136	Open in IMG/M
3300009137\|Ga0066709_103138448	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	604	Open in IMG/M
3300010048\|Ga0126373_10226248	All Organisms → cellular organisms → Bacteria → Proteobacteria	1827	Open in IMG/M
3300010048\|Ga0126373_11067523	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	873	Open in IMG/M
3300010048\|Ga0126373_11164325	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	837	Open in IMG/M
3300010343\|Ga0074044_11171909	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	501	Open in IMG/M
3300010366\|Ga0126379_13658393	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	515	Open in IMG/M
3300010376\|Ga0126381_100741370	Not Available	1407	Open in IMG/M
3300010376\|Ga0126381_101118099	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1138	Open in IMG/M
3300010376\|Ga0126381_102794470	Not Available	697	Open in IMG/M
3300012202\|Ga0137363_11801916	Not Available	505	Open in IMG/M
3300012917\|Ga0137395_10788543	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	688	Open in IMG/M
3300012923\|Ga0137359_10289814	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1459	Open in IMG/M
3300012927\|Ga0137416_10598409	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	960	Open in IMG/M
3300012948\|Ga0126375_10950584	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	695	Open in IMG/M
3300012955\|Ga0164298_11136414	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	587	Open in IMG/M
3300012971\|Ga0126369_12167873	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	643	Open in IMG/M
3300016270\|Ga0182036_10360060	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1123	Open in IMG/M
3300016294\|Ga0182041_11340636	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	655	Open in IMG/M
3300016341\|Ga0182035_11087444	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	711	Open in IMG/M
3300016357\|Ga0182032_10680115	All Organisms → cellular organisms → Bacteria	862	Open in IMG/M
3300016371\|Ga0182034_12058532	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	504	Open in IMG/M
3300016404\|Ga0182037_10270908	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1352	Open in IMG/M
3300016422\|Ga0182039_12230762	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	505	Open in IMG/M
3300018062\|Ga0187784_10885882	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	711	Open in IMG/M
3300020579\|Ga0210407_10734754	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	764	Open in IMG/M
3300020580\|Ga0210403_11234722	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales	574	Open in IMG/M
3300020581\|Ga0210399_11130582	Not Available	625	Open in IMG/M
3300020583\|Ga0210401_10862109	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	765	Open in IMG/M
3300021168\|Ga0210406_11184617	Not Available	557	Open in IMG/M
3300021560\|Ga0126371_12585602	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	615	Open in IMG/M
3300021560\|Ga0126371_13412688	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	536	Open in IMG/M
3300030969\|Ga0075394_11961575	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	554	Open in IMG/M
3300031231\|Ga0170824_100641207	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	600	Open in IMG/M
3300031474\|Ga0170818_100240768	Not Available	840	Open in IMG/M
3300031474\|Ga0170818_103879900	All Organisms → cellular organisms → Bacteria	571	Open in IMG/M
3300031543\|Ga0318516_10012681	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	4121	Open in IMG/M
3300031543\|Ga0318516_10085031	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1770	Open in IMG/M
3300031544\|Ga0318534_10078664	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1872	Open in IMG/M
3300031546\|Ga0318538_10589022	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	603	Open in IMG/M
3300031561\|Ga0318528_10664068	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	558	Open in IMG/M
3300031564\|Ga0318573_10026713	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2660	Open in IMG/M
3300031573\|Ga0310915_10035229	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3153	Open in IMG/M
3300031573\|Ga0310915_10180218	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1471	Open in IMG/M
3300031573\|Ga0310915_10397485	All Organisms → cellular organisms → Bacteria → Proteobacteria	978	Open in IMG/M
3300031573\|Ga0310915_10989864	Not Available	587	Open in IMG/M
3300031640\|Ga0318555_10025189	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	2845	Open in IMG/M
3300031640\|Ga0318555_10759298	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	524	Open in IMG/M
3300031680\|Ga0318574_10122833	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylomagnum → Methylomagnum ishizawai	1458	Open in IMG/M
3300031681\|Ga0318572_10008193	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	4824	Open in IMG/M
3300031681\|Ga0318572_10501644	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	723	Open in IMG/M
3300031682\|Ga0318560_10009341	Not Available	4163	Open in IMG/M
3300031682\|Ga0318560_10431470	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	713	Open in IMG/M
3300031682\|Ga0318560_10688933	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	553	Open in IMG/M
3300031713\|Ga0318496_10519367	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	658	Open in IMG/M
3300031719\|Ga0306917_10012432	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum	4960	Open in IMG/M
3300031719\|Ga0306917_10816221	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	731	Open in IMG/M
3300031736\|Ga0318501_10701400	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	558	Open in IMG/M
3300031748\|Ga0318492_10022856	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2739	Open in IMG/M
3300031751\|Ga0318494_10602039	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	642	Open in IMG/M
3300031763\|Ga0318537_10044624	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1600	Open in IMG/M
3300031763\|Ga0318537_10099721	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1075	Open in IMG/M
3300031763\|Ga0318537_10123736	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	961	Open in IMG/M
3300031764\|Ga0318535_10529434	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	523	Open in IMG/M
3300031781\|Ga0318547_10216084	Not Available	1149	Open in IMG/M
3300031781\|Ga0318547_10360084	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	889	Open in IMG/M
3300031797\|Ga0318550_10039861	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2067	Open in IMG/M
3300031833\|Ga0310917_10151868	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1529	Open in IMG/M
3300031835\|Ga0318517_10047391	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1791	Open in IMG/M
3300031845\|Ga0318511_10270735	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	764	Open in IMG/M
3300031859\|Ga0318527_10255325	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	745	Open in IMG/M
3300031879\|Ga0306919_10457473	All Organisms → cellular organisms → Bacteria → Proteobacteria	982	Open in IMG/M
3300031879\|Ga0306919_11538327	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	500	Open in IMG/M
3300031880\|Ga0318544_10174627	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	827	Open in IMG/M
3300031890\|Ga0306925_10616317	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1144	Open in IMG/M
3300031896\|Ga0318551_10718223	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	579	Open in IMG/M
3300031910\|Ga0306923_10011701	All Organisms → cellular organisms → Bacteria → Proteobacteria	8952	Open in IMG/M
3300031910\|Ga0306923_10059583	All Organisms → cellular organisms → Bacteria → Proteobacteria	4235	Open in IMG/M
3300031942\|Ga0310916_10289243	Not Available	1386	Open in IMG/M
3300031942\|Ga0310916_10467370	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1074	Open in IMG/M
3300031942\|Ga0310916_11443504	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	562	Open in IMG/M
3300031945\|Ga0310913_10076094	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2233	Open in IMG/M
3300031945\|Ga0310913_10549566	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	819	Open in IMG/M
3300031959\|Ga0318530_10160269	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	916	Open in IMG/M
3300031981\|Ga0318531_10107493	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1233	Open in IMG/M
3300031981\|Ga0318531_10533019	Not Available	532	Open in IMG/M
3300032001\|Ga0306922_11778652	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	607	Open in IMG/M
3300032035\|Ga0310911_10488516	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	714	Open in IMG/M
3300032039\|Ga0318559_10540150	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	544	Open in IMG/M
3300032043\|Ga0318556_10466764	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	660	Open in IMG/M
3300032044\|Ga0318558_10052547	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1807	Open in IMG/M
3300032059\|Ga0318533_10026469	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3723	Open in IMG/M
3300032059\|Ga0318533_11375972	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	515	Open in IMG/M
3300032064\|Ga0318510_10100899	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1098	Open in IMG/M
3300032076\|Ga0306924_10080075	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3661	Open in IMG/M
3300032076\|Ga0306924_10885356	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	989	Open in IMG/M
3300032076\|Ga0306924_12087117	Not Available	581	Open in IMG/M
3300032091\|Ga0318577_10093183	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1404	Open in IMG/M
3300032094\|Ga0318540_10133804	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1182	Open in IMG/M
3300032094\|Ga0318540_10566988	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	547	Open in IMG/M
3300032180\|Ga0307471_101002871	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1002	Open in IMG/M
3300032180\|Ga0307471_102095851	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	711	Open in IMG/M
3300032261\|Ga0306920_101161098	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1117	Open in IMG/M
3300033289\|Ga0310914_11900731	Not Available	500	Open in IMG/M
3300033290\|Ga0318519_10449828	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	772	Open in IMG/M
3300033290\|Ga0318519_10472896	All Organisms → cellular organisms → Bacteria → Proteobacteria	753	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	98.33%
Aquatic	Environmental → Aquatic	1.67%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	98.33%
Freshwater	Environmental → Aquatic → Freshwater	1.67%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	95.00%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.67%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.67%
Loam	Environmental → Terrestrial → Soil → Loam	1.67%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	79.17%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	14.17%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.67%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.67%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.67%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.67%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	55.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	20.00%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	10.00%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.33%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.50%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.67%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.67%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.83%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.83%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.83%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300030969	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA12 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062386_1016447801	3300004152	Bog Forest Soil	AVGYVVYEIERRRRKLHDIWDVLDEEDALLTAELEDMVERGELQPFAGAALA*
Ga0066395_108362022	3300004633	Tropical Forest Soil	YEIERRRRKLHDIWDVLDEEDALLTEKLEEMVESGELQPYAGATLA*
Ga0062388_1024760891	3300004635	Bog Forest Soil	LAVGYMFYEIERRRRKLHDIWDVLGGEDAILTERLEDMVESGELRPYAEATLA*
Ga0066676_108977602	3300005186	Soil	GYLVYEIERRRRKLHELWDVLDDDDAVITAALQDMVESGELQPFAGATLA*
Ga0066388_1016351532	3300005332	Tropical Forest Soil	RRKLHDLWDVLDEEDALLTEKLEEMVESGELQPYAGATLA*
Ga0066709_1031384481	3300009137	Grasslands Soil	LFYEIERRRQRLHDLWDVLDGEDAVITAVLEDMVESGELLPYTKATLA*
Ga0126373_102262482	3300010048	Tropical Forest Soil	VGYVVYEIERRRRKLHDVWDVLDEEDALLTEKLEEMVESGELQPYTGATLA*
Ga0126373_110675231	3300010048	Tropical Forest Soil	KLHDLFDVLGGEDAELTAGLVGMVESGELQPYAGATLA*
Ga0126373_111643252	3300010048	Tropical Forest Soil	HDLWDVLGGEDAELTAGLVEMVQAGELQPYAGATLA*
Ga0074044_111719091	3300010343	Bog Forest Soil	KMYDIWNVLDEEDAILSQTLEEMVESGELLPYIGATLA*
Ga0126379_136583931	3300010366	Tropical Forest Soil	YEIDRRRRKLHDLFDVLDEDDVHITKRLEDMVASGELQPYAGTSLA*
Ga0126381_1007413701	3300010376	Tropical Forest Soil	VGYIVYEIDRRRRKLHDLIDVLDGEDAELTEGLVRMVSNGELRPYTAATLA*
Ga0126381_1011180992	3300010376	Tropical Forest Soil	RKLHDLWDVLGGEDAELTAGLVAMVESGELQPYTGATLA*
Ga0126381_1027944701	3300010376	Tropical Forest Soil	DIWDVLDEEDALLTEKLEEMVESGELQPYAGATLA*
Ga0137363_118019161	3300012202	Vadose Zone Soil	IERRRCSLHDLWDVLDGEDAELTAGLVEMVESGELRPYAGATLA*
Ga0137395_107885433	3300012917	Vadose Zone Soil	VYEIERRRRKLHDLWDVLDEEDAFLTEKLEDMVESGELQPYTGATLA*
Ga0137359_102898144	3300012923	Vadose Zone Soil	YVVYEIERRRRSLHDLWDVLDGEDAELTAGLVEMVESGELQPYAGATLA*
Ga0137416_105984093	3300012927	Vadose Zone Soil	RRRRSLHDLWDVLDGEDAELTAGLVEMVESGELRPYAGATLA*
Ga0126375_109505841	3300012948	Tropical Forest Soil	MSALAVGYVVFEIDRRRRKLHDLIDVLGGEDAKLTEGLVSMVESGE
Ga0164298_111364142	3300012955	Soil	LHDIWDVLDEEDALLTEKLEEMVESGELQPYTGATLA*
Ga0126369_121678731	3300012971	Tropical Forest Soil	IERRRRKLHDLWDVLGGEDAELTAGLVAMVESGELQPYTGATLA*
Ga0182036_103600602	3300016270	Soil	LAVGYLVYEIDRRQRKLREVFDVLDAEDAAITARLEDMVASGELQPYTGATLV
Ga0182036_118031141	3300016270	Soil	AVGYMIYEIDRRQRKLREVFDVLDAEDSEITASLEDLVARGEPRPYAGATLG
Ga0182041_113406362	3300016294	Soil	DLWDVLGGEDAELTAGLVEMVQAGELRPYAGATLA
Ga0182035_110874442	3300016341	Soil	YEIDRRQRKLREIFDVLDAEDAAVTARLEDMVASGELQPYTGATLA
Ga0182032_106801151	3300016357	Soil	KLHDVFDVLGGEDAELTEGLLNMVRNGELQPYTGTTLA
Ga0182034_120585322	3300016371	Soil	VYEIDRRRRKLHDVFDVLDADDANITAGLENMVASGELRPYAGATLA
Ga0182037_102709081	3300016404	Soil	SAPAVGYMVYEIDRRRRNLHDVFDVLGGEDAELTAGLVGMVESGELQPYAGATLA
Ga0182039_100313041	3300016422	Soil	KLHDLWDVLDGEDAILTNTLEDMVESGELVPYAGATLA
Ga0182039_122307621	3300016422	Soil	ALAVGYLVYEIDRRRRKLHQVFDVLDADDAQITAGLEDMVASGELQPYAGATLA
Ga0187784_108858822	3300018062	Tropical Peatland	ALAVGYLVYEIDRRRRKLHDVFDVLDADDVYITKRLEDMVASGELQPYTGMSLA
Ga0210407_107347543	3300020579	Soil	VGYVVYEIERRRRKLHDVWDVLDEEDALLTEKLEEMVESGELQPYTGATLA
Ga0210403_112347221	3300020580	Soil	KVHDVWDVLDEEDALLTEKLEEMVESGELQPYTGATLA
Ga0210399_111305822	3300020581	Soil	ELWDVLDEEDALLTQRLEDMVESGELQPHTGAALA
Ga0210401_108621093	3300020583	Soil	ALAVGYLVYEVERRRRKLHELWDVLDDDDAVITAALQDMVESGELQPFAGASLA
Ga0210406_111846171	3300021168	Soil	HDLWDVLDEEDALLTEKLEDMVESGELQPYPGATLA
Ga0126371_112757962	3300021560	Tropical Forest Soil	MIYEIDRRQRKLREVFDVLDAEDSEITASLEDLVARGELRPYAGATLG
Ga0126371_125856021	3300021560	Tropical Forest Soil	LGYLVYEIDRRRRKLHDIFDVLDADDAHITARLETMVASGELQPYAGATLA
Ga0126371_134126881	3300021560	Tropical Forest Soil	MVYEIERRRRKLHDLWDVLGGEDAELTAGLVEMVQAGELRPYAGATLA
Ga0075394_119615751	3300030969	Soil	GALAVGYVVYEIERRRRKLHDVWDVLDEEDALLTEKLEEMVESGELQPYTGATLA
Ga0170824_1006412072	3300031231	Forest Soil	VYEIDRRRRKLHDVFDVLDADDAVITARLEDMVESGELQPYTGAVLA
Ga0170818_1002407682	3300031474	Forest Soil	KLHDVWDVLDEEDALLTEKLEEMVESGELQPYTGATLA
Ga0170818_1038799002	3300031474	Forest Soil	DRRQRKLHDVFDVLDADDALLTEKLEEMVESGELQPYTGVTLA
Ga0318516_100126817	3300031543	Soil	LAVGYMVYEIDRRRRNLHDVFDVLGGEDAELTAGLVGMVESGELQPYAGATLA
Ga0318516_100850312	3300031543	Soil	GYMVYEIDRRRRNLHDVFDVLGGEDAELTAGLVGMVESGELQPYAGATLA
Ga0318534_100786642	3300031544	Soil	EIDRRRRKLHDLFDVLGGEDAELTTGLVGMVESGELQPYAGASLA
Ga0318538_105839912	3300031546	Soil	EIDRRRRKLHEVFDVLDADDARITAGLEDMVASGELRPYAGATLA
Ga0318538_105890221	3300031546	Soil	AVGYMVYEIERRRRKLHDLWDVLGGEDAELTAGLVEMVQAGELRPYAGATLA
Ga0318528_106640681	3300031561	Soil	RKLHDLWDVLGGEDAELTAGLVEMVQAGELRPYAGATLA
Ga0318573_100267131	3300031564	Soil	LHDVFDVLGGEDAELTAGLVGMVESGELQPYAGATLA
Ga0310915_100328921	3300031573	Soil	VYEIDRRRRKLHEVFDVLDADDARITAGLEDMVASGELRPYAGATLA
Ga0310915_100352291	3300031573	Soil	VGYMVYEIDRRRRNLHDVFDVLGGEDAELTAGLVGMVESGELQPYAGATLA
Ga0310915_101802181	3300031573	Soil	EIDRRQRKLREIFDVLDAEDAAVTARLEDMVASGELQPYTGATLA
Ga0310915_103974853	3300031573	Soil	AVGYIVYEIDRRRRKLHDLIDVLDGEDAELTEELVRMVRNGELRPYTGATLA
Ga0310915_109898641	3300031573	Soil	RRRKLHDVWDVLDEEDALLTEKLEEMVESGELQPYTGATLA
Ga0318555_100251891	3300031640	Soil	HDLFDVLGGEDAELTAGLVGMVESGELQPYAGATLA
Ga0318555_107592982	3300031640	Soil	HDVFDVLGGEDAELTAGLVGMVESGELQPYAGATLA
Ga0318574_101228331	3300031680	Soil	LALGYMVYEIDRRRRKLHEVFDVLDADDARITAGLEDMVASGELRPYAGATLA
Ga0318572_100081931	3300031681	Soil	GYMLYEIDRRRRKLHDLFDVLGGEDAELTTGLVGMVESGELQPYAGASLA
Ga0318572_105016441	3300031681	Soil	LHDLWDVLGGEDAELTAGLVEMVQAGELRPYAGATLA
Ga0318560_100093417	3300031682	Soil	NLHDVFDVLGGEDAELTAGLVGMVESGELQPYAGATLA
Ga0318560_104314701	3300031682	Soil	YMVYEIDRRRRKLHDLFDVLGGEDAELTAGLVGMVESGELQPYAGATLA
Ga0318560_106889331	3300031682	Soil	GYLVYEIDRRRRKLHDVFDVLDADDARITARLEDMVASGALQPYAGARAN
Ga0318496_105193672	3300031713	Soil	AVAYVVYEIDRRQRKLHDLWDVLDGEDAILTNTLEDMVESGELVPYAGATLA
Ga0306917_100124329	3300031719	Soil	AVGYMVYEIDRRRRKLHDLFDVLGGEDAELTAGLVGMVESGELQPYAGATLA
Ga0306917_108162212	3300031719	Soil	HDLWDVLGGEDAELTAGLVEMVQAGELRPYAGATLA
Ga0318501_107014001	3300031736	Soil	HDVFDVLGGEDAELTEGLLNMVRNGELQPYTGTTLA
Ga0318492_100228561	3300031748	Soil	AVGYMVYEIDRRRRNLHDVFDVLGGEDAELTAGLVGMVESGELQPYAGATLA
Ga0318494_106020391	3300031751	Soil	ALAVGYMVYEIERRRRKLHDLWDVLGGEDAELTAGLVEMVQAGELRPYAGATLA
Ga0318537_100446241	3300031763	Soil	GYMVYEIERRRRKLHDLWDVLGGEDAELTAGLVEMVQAGELRPYAGATLA
Ga0318537_100997211	3300031763	Soil	LALGYMVYEIDRRRRKLHEVFDVLDADDAQITAGLEDMVASGELRPYAGATLA
Ga0318537_101237363	3300031763	Soil	EIDRRRRKLHDLIDVLDGEDAELTEELVRMVRNGELRPYTGATLA
Ga0318535_105294341	3300031764	Soil	ALAVAYLVYEIDRRQRKLHDLWDVLDGEDAILTNTLEDMVESGELVPYAGATLA
Ga0318547_102160844	3300031781	Soil	DLIDVLDGEDAELTEGLVSMVRNGELRPYTGATLA
Ga0318547_103600843	3300031781	Soil	LHDLIDVLDGEDAELTEGLVSMVRNGELRPYTGATVA
Ga0318529_103531282	3300031792	Soil	YMVYEIDRRRRKLHEVFDVLDADDARITAGLEDMVASGELRPYAGATLA
Ga0318550_100398612	3300031797	Soil	VYEIDRRRRNLHDVFDVLGGEDAELTAGLVGMVESGELQPYAGATLA
Ga0310917_101518682	3300031833	Soil	HDLWDVLGGEDAELTAGLVEMVQTGELRPYAGATLA
Ga0318517_100473911	3300031835	Soil	RRNLHDVFDVLGGEDAELTAGLVGMVESGELQPYAGATLA
Ga0318511_102707351	3300031845	Soil	LAVGYMVYEIDRRQRKLREIFDVLDAEDAAVTARLEDMVASGELQPYTGATLA
Ga0318527_102553251	3300031859	Soil	ALGYMVYEIDRRRRKLHEVFDVLDADDAQITAGLEDMVASGELRPYAGATLA
Ga0306919_104574733	3300031879	Soil	ALAVGYIVYEIDRRRRKLHDLIDVLDGEDAELTEELVRMVRNGELRPYTGATLA
Ga0306919_108962302	3300031879	Soil	YEIDRRRRKLHEVFDVLDADDARITAGLEDMVASGELRPYAGATLA
Ga0306919_115383272	3300031879	Soil	LVYEIDRRRRKLHDVFDVLGGEDAELTEGLLNMVRNGELQPYTGTTLA
Ga0318544_101746272	3300031880	Soil	GYLVYEIDRRRRKLHDVFDVLDADDAHITERLEDMVASGDLRPYAGATLA
Ga0306925_106163171	3300031890	Soil	ALAVGYIVYEIDRRRRKLHDLIDVLGGEDAELTEGLVRMVRNGELRPYTGATLA
Ga0306925_108532533	3300031890	Soil	DRRQRKLREVFDVLDAEDSEITASLEDLVARGEPRPYAGATLG
Ga0318551_107182231	3300031896	Soil	MVYEIDRRRRKLHEVFDVLDADDAHITAGLEDMVASGELRPYAGAAIA
Ga0306923_1001170110	3300031910	Soil	RRRRKLHDLIDVLDGEDAELTEGLVSMVRNGELRPYTGATLA
Ga0306923_100595831	3300031910	Soil	DRRRRKLHDLFDVLGGEDAELTAGLVGMVESGELQPYAGATLA
Ga0306921_112306302	3300031912	Soil	YMIYEIDRRQRKLREVFDVLDAEDSEITASLEDLVARGELRPYAGATLG
Ga0310916_102892431	3300031942	Soil	QREMHDLWDVLGGEDAEITAGLIDMVESGELQPYAGATLA
Ga0310916_104673701	3300031942	Soil	LGYMVYEIDRRRRKLHEVFDVLDADDAQITAGLEDMVASGELRPYAGATLA
Ga0310916_114435041	3300031942	Soil	YIVYEIDRRRRKLHDLIDVLDGEDAELTEGLVRMVRNGELRPYTGATLA
Ga0310913_100760941	3300031945	Soil	IDRRRRKLHDLIDVLDGEDAELTEELVRMVRNGELRPYTGATLA
Ga0310913_105495662	3300031945	Soil	SALAVGYMVYEIERRRRKLHDLWDVLGGEDAELTAGLVEMVQTGELRPYAGATLA
Ga0318530_101602691	3300031959	Soil	VYEIDRRQRKLREIFDVLDAEDAAVTARLEDMVASGELQPYTRATLA
Ga0318531_100089136	3300031981	Soil	LGYMVYEIDRRRRKLHEVFDVLDADDARITAGLEDMVASGELRPYAGATLA
Ga0318531_101074931	3300031981	Soil	LVYEIDRRRRKLHDVFDVLDADDAHITAVLETMVASGELRPYTGATLA
Ga0318531_105330192	3300031981	Soil	LVYEIDRRRRKLHDVFDVLDADDARIATRLEDMVADGVLQPYAGARLN
Ga0306922_117786522	3300032001	Soil	RRRKLHDLIDVLDGEDAELTEGLVSMVRNGELRPYTGATLA
Ga0310911_104885161	3300032035	Soil	DLIDVLGGEDAELTEGLVRMVRNGELRPYTGATLA
Ga0318559_105401502	3300032039	Soil	ALGYLVYEIDRRRRKLHDVFDVLDADDARITARLEDMVASGALQPYAGARAN
Ga0318556_104667642	3300032043	Soil	LALGYLVYEIDRRRRKLHDIFDVLDADDAHITAGLEAMVASGELRPYAGATLA
Ga0318558_100525472	3300032044	Soil	QLHDLFDVLGGEDAELTAGLVGMVESGELQPYAGATLA
Ga0318533_100264691	3300032059	Soil	LHDGFDVLGGEDAELTAGLVGMVESGELQPYAGATLA
Ga0318533_113759721	3300032059	Soil	LAVGYIVYEIDRRRRKLHDLIDVLDGEDAELTEGLVSMVRNGELRPYTGATLA
Ga0318510_101008991	3300032064	Soil	MVYEIDRRRRKLHEVFDVLDADDAQITAGLEDMVASGELRPYAGATLA
Ga0306924_100800751	3300032076	Soil	YEIDRRRRNLHDVFDVLGGEDAELTAGLVGMVESGELQPYAGATLA
Ga0306924_108853564	3300032076	Soil	GYIVYEIDRRRRKLHDLIDVLDGEDAELTEGLISMVRNGELRPYTGATLA
Ga0306924_120871171	3300032076	Soil	KLHDLIDVLDGEDAELTEGLVSMVRNGELRPYTGATLA
Ga0318577_100931832	3300032091	Soil	GYMVYEIERRRRKLHDLWDVLGGEDAELTAGLVEMVQTGELRPYAGATLA
Ga0318540_101338042	3300032094	Soil	SALAVGYMVYEIDRRRRKLHDLFDVLGGEDAELTAGLVGMVESGELQPYAGATLA
Ga0318540_105669882	3300032094	Soil	EIDRRRRKLHDVFDVLGGEDAELTEGLLNMVRNGELQPYTGTTLA
Ga0307471_1010028711	3300032180	Hardwood Forest Soil	ALALGYMVYEIDRRRRKLHDIFDVLDADDAHLTAGLEDMVASGELRPYAGATLA
Ga0307471_1020958511	3300032180	Hardwood Forest Soil	VGYLVYEIERRRRKLHELWDVLDDDDAVITAALQDMVESGELRPFAGATLA
Ga0306920_1011610981	3300032261	Soil	LAVSYIVYEIDRRRRKLHDLIDVLDGEDAELTEGLVRMVRNGELRPYTGATLA
Ga0310914_119007311	3300033289	Soil	LAVGYMIYEIDRRQRKLREVFDVLDADDAAITSRLEAMVASGELMPYTGATLA
Ga0318519_104498281	3300033290	Soil	LYDLFDVLGGEDAELTAGLVGMVESGELQPYAGATLA
Ga0318519_104728963	3300033290	Soil	GYIVYEIDRRRRKLHDLIDVLDGEDAELTEELVRMVRNGELRPYTGATLA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F072995

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences