Metagenome / Metatranscriptome Family F072931

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F072931
Family Type	Metagenome / Metatranscriptome
Number of Sequences	120
Average Sequence Length	45 residues
Representative Sequence	MPDTASPSPLPPLLQSFDAPLGRKIIELHVWAVGEGLRGTEAAALF
Number of Associated Samples	84
Number of Associated Scaffolds	120

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	94.87 %
% of genes near scaffold ends (potentially truncated)	97.50 %
% of genes from short scaffolds (< 2000 bps)	92.50 %
Associated GOLD sequencing projects	77
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.45

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (75.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (53.333 % of family members)
Environment Ontology (ENVO)	Unclassified (78.333 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (51.667 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 27.03% β-sheet: 0.00% Coil/Unstructured: 72.97%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.45
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.45
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 120 Family Scaffolds
PF00171	Aldedh	12.50
PF14384	BrnA_antitoxin	6.67
PF04392	ABC_sub_bind	3.33
PF12680	SnoaL_2	3.33
PF13416	SBP_bac_8	3.33
PF00211	Guanylate_cyc	2.50
PF04828	GFA	1.67
PF01425	Amidase	1.67
PF12872	OST-HTH	1.67
PF13191	AAA_16	0.83
PF04365	BrnT_toxin	0.83
PF00497	SBP_bac_3	0.83
PF01321	Creatinase_N	0.83
PF00583	Acetyltransf_1	0.83
PF04632	FUSC	0.83
PF11737	DUF3300	0.83
PF04986	Y2_Tnp	0.83
PF03092	BT1	0.83
PF00999	Na_H_Exchanger	0.83

COG ID	Name	Functional Category	% Frequency in 120 Family Scaffolds
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	12.50
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	12.50
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	12.50
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	3.33
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	2.50
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	1.67
COG3791	Uncharacterized conserved protein	Function unknown [S]	1.67
COG0006	Xaa-Pro aminopeptidase	Amino acid transport and metabolism [E]	0.83
COG0025	NhaP-type Na+/H+ or K+/H+ antiporter	Inorganic ion transport and metabolism [P]	0.83
COG0475	Kef-type K+ transport system, membrane component KefB	Inorganic ion transport and metabolism [P]	0.83
COG1289	Uncharacterized membrane protein YccC	Function unknown [S]	0.83
COG2929	Ribonuclease BrnT, toxin component of the BrnT-BrnA toxin-antitoxin system	Defense mechanisms [V]	0.83
COG3004	Na+/H+ antiporter NhaA	Energy production and conversion [C]	0.83
COG3263	NhaP-type Na+/H+ and K+/H+ antiporter with C-terminal TrkAC and CorC domains	Energy production and conversion [C]	0.83
COG4651	Predicted Kef-type K+ transport protein, K+/H+ antiporter domain	Inorganic ion transport and metabolism [P]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	75.00 %
Unclassified	root	N/A	25.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	75.00 %
Unclassified	root	N/A	25.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	75.00 %
Unclassified	root	N/A	25.00 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	53.33 %
Unclassified	root	N/A	25.00 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	4.17 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	40.83 %
Unclassified	root	N/A	25.00 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	2.50 %
Nitrospira	class	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira	1.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.00 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	20.83 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	5.83 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2.50 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.50 %
Nitrospirales	order	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales	1.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.00 %
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	13.33 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.83 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	2.50 %
Nitrospirales	order	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales	1.67 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.00 %
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	13.33 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.83 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2.50 %
Nitrospirales	order	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales	1.67 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.00 %
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	13.33 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.83 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2.50 %
Nitrospirales	order	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales	1.67 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004082\|Ga0062384_100087922	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1629	Open in IMG/M
3300004082\|Ga0062384_101159631	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	560	Open in IMG/M
3300005549\|Ga0070704_102101148	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	525	Open in IMG/M
3300010358\|Ga0126370_10274789	Not Available	1321	Open in IMG/M
3300010361\|Ga0126378_12620132	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	576	Open in IMG/M
3300010361\|Ga0126378_13472409	Not Available	500	Open in IMG/M
3300010366\|Ga0126379_11438968	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	795	Open in IMG/M
3300010366\|Ga0126379_13178094	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	550	Open in IMG/M
3300010376\|Ga0126381_101664734	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	922	Open in IMG/M
3300010398\|Ga0126383_13515917	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	512	Open in IMG/M
3300010398\|Ga0126383_13625597	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300012096\|Ga0137389_10285179	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1395	Open in IMG/M
3300012202\|Ga0137363_11745301	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	515	Open in IMG/M
3300012207\|Ga0137381_10752464	All Organisms → cellular organisms → Bacteria	846	Open in IMG/M
3300015241\|Ga0137418_11021228	Not Available	596	Open in IMG/M
3300016294\|Ga0182041_11824589	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	564	Open in IMG/M
3300016319\|Ga0182033_10812557	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales	824	Open in IMG/M
3300016319\|Ga0182033_11816951	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	553	Open in IMG/M
3300016341\|Ga0182035_11785055	Not Available	557	Open in IMG/M
3300016357\|Ga0182032_11363715	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	613	Open in IMG/M
3300016371\|Ga0182034_10106196	All Organisms → cellular organisms → Bacteria → Proteobacteria	2025	Open in IMG/M
3300016371\|Ga0182034_10628792	Not Available	908	Open in IMG/M
3300016371\|Ga0182034_10780386	Not Available	817	Open in IMG/M
3300016387\|Ga0182040_10258003	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1313	Open in IMG/M
3300016404\|Ga0182037_12067200	Not Available	512	Open in IMG/M
3300016445\|Ga0182038_11062985	Not Available	718	Open in IMG/M
3300016445\|Ga0182038_11095371	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	708	Open in IMG/M
3300017943\|Ga0187819_10518522	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	679	Open in IMG/M
3300020580\|Ga0210403_10197202	All Organisms → cellular organisms → Bacteria	1651	Open in IMG/M
3300021178\|Ga0210408_10149541	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1849	Open in IMG/M
3300021180\|Ga0210396_10928217	Not Available	741	Open in IMG/M
3300021479\|Ga0210410_11796668	Not Available	507	Open in IMG/M
3300021560\|Ga0126371_12612068	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	612	Open in IMG/M
3300021560\|Ga0126371_13584761	Not Available	524	Open in IMG/M
3300026489\|Ga0257160_1002814	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1948	Open in IMG/M
3300030730\|Ga0307482_1174906	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	639	Open in IMG/M
3300031128\|Ga0170823_12063139	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	672	Open in IMG/M
3300031545\|Ga0318541_10671953	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	579	Open in IMG/M
3300031561\|Ga0318528_10211964	Not Available	1037	Open in IMG/M
3300031573\|Ga0310915_10827630	All Organisms → cellular organisms → Bacteria → Proteobacteria	650	Open in IMG/M
3300031573\|Ga0310915_11241509	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	514	Open in IMG/M
3300031668\|Ga0318542_10444539	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	672	Open in IMG/M
3300031679\|Ga0318561_10148513	All Organisms → cellular organisms → Bacteria → Proteobacteria	1257	Open in IMG/M
3300031679\|Ga0318561_10778808	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	526	Open in IMG/M
3300031680\|Ga0318574_10072962	All Organisms → cellular organisms → Bacteria → Proteobacteria	1857	Open in IMG/M
3300031681\|Ga0318572_10452361	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	764	Open in IMG/M
3300031713\|Ga0318496_10411744	All Organisms → cellular organisms → Bacteria	747	Open in IMG/M
3300031719\|Ga0306917_10148712	All Organisms → cellular organisms → Bacteria → Proteobacteria	1735	Open in IMG/M
3300031719\|Ga0306917_10253330	All Organisms → cellular organisms → Bacteria	1349	Open in IMG/M
3300031719\|Ga0306917_10608039	All Organisms → cellular organisms → Bacteria → Nitrospirae	860	Open in IMG/M
3300031719\|Ga0306917_11114988	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	614	Open in IMG/M
3300031723\|Ga0318493_10743990	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	551	Open in IMG/M
3300031724\|Ga0318500_10272673	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	824	Open in IMG/M
3300031736\|Ga0318501_10303675	All Organisms → cellular organisms → Bacteria → Nitrospirae	852	Open in IMG/M
3300031744\|Ga0306918_10100454	All Organisms → cellular organisms → Bacteria → Proteobacteria	2058	Open in IMG/M
3300031744\|Ga0306918_10971319	Not Available	660	Open in IMG/M
3300031747\|Ga0318502_10485438	Not Available	739	Open in IMG/M
3300031748\|Ga0318492_10778588	Not Available	514	Open in IMG/M
3300031763\|Ga0318537_10319360	Not Available	574	Open in IMG/M
3300031768\|Ga0318509_10107236	All Organisms → cellular organisms → Bacteria	1511	Open in IMG/M
3300031768\|Ga0318509_10337159	All Organisms → cellular organisms → Bacteria	844	Open in IMG/M
3300031771\|Ga0318546_11228453	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	526	Open in IMG/M
3300031777\|Ga0318543_10080640	All Organisms → cellular organisms → Bacteria	1377	Open in IMG/M
3300031777\|Ga0318543_10245874	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	798	Open in IMG/M
3300031777\|Ga0318543_10404106	Not Available	612	Open in IMG/M
3300031779\|Ga0318566_10224128	All Organisms → cellular organisms → Bacteria	933	Open in IMG/M
3300031779\|Ga0318566_10549306	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	564	Open in IMG/M
3300031781\|Ga0318547_10449607	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	793	Open in IMG/M
3300031782\|Ga0318552_10218395	Not Available	966	Open in IMG/M
3300031796\|Ga0318576_10071812	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1540	Open in IMG/M
3300031796\|Ga0318576_10392516	All Organisms → cellular organisms → Bacteria → Nitrospirae	656	Open in IMG/M
3300031796\|Ga0318576_10627596	Not Available	506	Open in IMG/M
3300031797\|Ga0318550_10663166	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	500	Open in IMG/M
3300031805\|Ga0318497_10270647	All Organisms → cellular organisms → Bacteria	944	Open in IMG/M
3300031819\|Ga0318568_10271085	All Organisms → cellular organisms → Bacteria	1052	Open in IMG/M
3300031819\|Ga0318568_11056513	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	501	Open in IMG/M
3300031832\|Ga0318499_10432379	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	502	Open in IMG/M
3300031835\|Ga0318517_10323493	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	697	Open in IMG/M
3300031845\|Ga0318511_10592426	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	516	Open in IMG/M
3300031846\|Ga0318512_10094095	Not Available	1401	Open in IMG/M
3300031859\|Ga0318527_10026354	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2123	Open in IMG/M
3300031859\|Ga0318527_10279053	All Organisms → cellular organisms → Bacteria → Proteobacteria	711	Open in IMG/M
3300031859\|Ga0318527_10420510	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	570	Open in IMG/M
3300031860\|Ga0318495_10341885	All Organisms → cellular organisms → Bacteria → Proteobacteria	663	Open in IMG/M
3300031890\|Ga0306925_10136443	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2635	Open in IMG/M
3300031890\|Ga0306925_10257190	All Organisms → cellular organisms → Bacteria → Proteobacteria	1881	Open in IMG/M
3300031890\|Ga0306925_12063399	Not Available	535	Open in IMG/M
3300031893\|Ga0318536_10115590	All Organisms → cellular organisms → Bacteria	1353	Open in IMG/M
3300031893\|Ga0318536_10364386	All Organisms → cellular organisms → Bacteria	731	Open in IMG/M
3300031910\|Ga0306923_10741782	All Organisms → cellular organisms → Bacteria → Proteobacteria	1090	Open in IMG/M
3300031912\|Ga0306921_12330219	All Organisms → cellular organisms → Bacteria	560	Open in IMG/M
3300031912\|Ga0306921_12730902	Not Available	507	Open in IMG/M
3300031942\|Ga0310916_10038648	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3571	Open in IMG/M
3300031945\|Ga0310913_11136461	Not Available	545	Open in IMG/M
3300031954\|Ga0306926_10312215	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1945	Open in IMG/M
3300031954\|Ga0306926_10669596	All Organisms → cellular organisms → Bacteria → Proteobacteria	1261	Open in IMG/M
3300031954\|Ga0306926_11076357	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	952	Open in IMG/M
3300031962\|Ga0307479_10271751	All Organisms → cellular organisms → Bacteria	1675	Open in IMG/M
3300031981\|Ga0318531_10464169	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	573	Open in IMG/M
3300032001\|Ga0306922_10760824	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1015	Open in IMG/M
3300032010\|Ga0318569_10471822	All Organisms → cellular organisms → Bacteria	585	Open in IMG/M
3300032035\|Ga0310911_10119132	All Organisms → cellular organisms → Bacteria	1464	Open in IMG/M
3300032039\|Ga0318559_10179073	All Organisms → cellular organisms → Bacteria → Proteobacteria	970	Open in IMG/M
3300032042\|Ga0318545_10117613	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	936	Open in IMG/M
3300032042\|Ga0318545_10148902	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales	831	Open in IMG/M
3300032043\|Ga0318556_10761366	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300032052\|Ga0318506_10570510	Not Available	501	Open in IMG/M
3300032055\|Ga0318575_10045724	All Organisms → cellular organisms → Bacteria	1989	Open in IMG/M
3300032059\|Ga0318533_10119506	All Organisms → cellular organisms → Bacteria	1841	Open in IMG/M
3300032076\|Ga0306924_11498434	Not Available	715	Open in IMG/M
3300032076\|Ga0306924_11697260	Not Available	662	Open in IMG/M
3300032076\|Ga0306924_12268968	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	551	Open in IMG/M
3300032090\|Ga0318518_10626632	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	548	Open in IMG/M
3300032091\|Ga0318577_10036381	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2155	Open in IMG/M
3300032094\|Ga0318540_10224267	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	907	Open in IMG/M
3300032261\|Ga0306920_101084050	All Organisms → cellular organisms → Bacteria	1162	Open in IMG/M
3300033289\|Ga0310914_10339728	Not Available	1357	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	97.50%
Aquatic	Environmental → Aquatic	2.50%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	97.50%
Freshwater	Environmental → Aquatic → Freshwater	2.50%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	96.67%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.50%
Loam	Environmental → Terrestrial → Soil → Loam	0.83%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	85.00%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	11.67%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.67%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.83%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	53.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	29.17%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	8.33%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.33%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.67%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.67%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.83%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.83%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300026489	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-11-A	Environmental	Open in IMG/M
3300030730	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062384_1000879221	3300004082	Bog Forest Soil	MPSLPQSFDAPLGRKIIELHVWAVGEGLRGAEAALLFDGLCQRLVGAG
Ga0062384_1011596311	3300004082	Bog Forest Soil	MRDPSQPPPIPQRLASFDGALGRNIIDLHVWAVDRGLHGASAEALFDGLCQRLVEA
Ga0070704_1021011481	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MPDTASPSLLQSFDDPLGRKIIELHVWAVGEGLRGTEVAPLFDGL
Ga0126370_102747892	3300010358	Tropical Forest Soil	MPATPPLPLSFDEPLGQKIIELHVWAVSKGLDGIEAAPLFDGLC
Ga0126378_126201322	3300010361	Tropical Forest Soil	MPSLPLSFDGPLGQKIIELHVWAVGEGLRGTEAAPLFEGLC
Ga0126378_134724091	3300010361	Tropical Forest Soil	MPDTASPPPLPPLPQSFDDPLGRKIIELHVWSVGEGL
Ga0126379_114389681	3300010366	Tropical Forest Soil	MPDTASPPPLAPLPQSFDDPLGRKIIELHVWSVGEGLRGKEAA
Ga0126379_131780941	3300010366	Tropical Forest Soil	MPATPPLPLSFDEPLGQKIIELHVWAVSKGLDGIEAAPLFDGLCQRLVDAGV
Ga0126381_1016647341	3300010376	Tropical Forest Soil	MPDAPTPFRGPPLPQSFDDPLGRKIIELYVWAVGEGLRGTEAAPLFDGLCQR
Ga0126383_135159171	3300010398	Tropical Forest Soil	MPDTASRPPLPPLPQSFDDPLGRKIIELHVWSVGEGLRGTEAALLFDGL
Ga0126383_136255972	3300010398	Tropical Forest Soil	MPDTASRPPLPPLPQSFDDPLGRKIIELHVWSVGE
Ga0137389_102851791	3300012096	Vadose Zone Soil	MLDRRSPQMPSLPLSFDGPLGQKIIELHVWAFSEGLRGIDAALLF
Ga0137363_117453011	3300012202	Vadose Zone Soil	MPDTASPSPLPPLLQSFDDPLGRKIIELHVWAVGEGLRGTEVAPL
Ga0137381_107524642	3300012207	Vadose Zone Soil	MPSLPRSFDGPLGQKIIEMHVWAVGEGLRGSEAAALFDGLCQRLV
Ga0137418_110212281	3300015241	Vadose Zone Soil	MLEQPRSPQLPSLPRSFDGPLGQKIIELHVWAVGEGLR
Ga0182041_118245891	3300016294	Soil	MPDTARPSALRPLPQSFDEPLGRKIIEMHVWAVGEGLRGTEA
Ga0182033_108125571	3300016319	Soil	MHDMPPPSRMPSPPLSFDGPLGRKIIELHVWAVGEGLR
Ga0182033_118169511	3300016319	Soil	MPSPPLSFDGPLGRKIVELHVWAVGEGLRGIDAASLFDGLC
Ga0182035_117850551	3300016341	Soil	MPDIASPPPLPPLPQSFDDPLGRKIIELHVWSVGEGLRGKEAA
Ga0182032_113637151	3300016357	Soil	MPDIASPPPLPPLPQSFDDPLGRKIIELHVWSVGEGLRGKEAALLFDGL
Ga0182034_101061961	3300016371	Soil	MPDTASPSPLPPLLQSFDAPLGRKIIELHVWAVGEGLRGTEAAALFDSLC
Ga0182034_106287922	3300016371	Soil	MPDTASPSPLRPLPQSFDEPLGRKIIEMHVWAVGEGLRGT
Ga0182034_107803862	3300016371	Soil	MPDTASPSPLPPMPQSFDEPLGRKIIEMHVWAVGEGLRGT
Ga0182034_113889391	3300016371	Soil	MPSPPLSFDGPLGRKIIELHVWAVGEGLRGTEAAPLFDG
Ga0182040_102580031	3300016387	Soil	MPAAPPVSRMPPLPLSFDEPLGRKIVELHVWAVGEGLRGTEAAPLFHGLCQRLV
Ga0182037_120672001	3300016404	Soil	MPATPPLSRIPLLPLSYDEPLGQKIIELHVWAVSEGLRGTEA
Ga0182038_110629852	3300016445	Soil	MPDKPPLSPMPSLPLSFDGPLGQKIIELHVWAVGEGLRGAEAA
Ga0182038_110953711	3300016445	Soil	MPDIASPPPLPPLPQSFDDPLGRKIIELHVWSVGEGLRGKEAALLFDGLC
Ga0187819_105185221	3300017943	Freshwater Sediment	MPHTSPLSRMPSLPLSFDGPLGRKIIEIHVWAVGEGLRGADAAALFDG
Ga0210403_101972021	3300020580	Soil	MPDTASPSPLPPLLQSFDDPLGRKIIELHVWAVVEGLRIKARIC
Ga0210408_101495411	3300021178	Soil	MPDTASPSPLPPLLQSFDDPLGRKIIELHVWAVGEGLRIKARICRC
Ga0210396_109282171	3300021180	Soil	MPDTASPSPLPPLLQSFDDPLGRKIIELHVWAVGEGLRIKA
Ga0210410_117966681	3300021479	Soil	MPDTASPSPLPPLLQSFDAPLGRKIIELHVWAVGEGL
Ga0126371_126120681	3300021560	Tropical Forest Soil	MPDTAGPPSLPPLPRSFDDPLGRKIIELHVWSVGEGLRGSEAALLFDGL
Ga0126371_135847612	3300021560	Tropical Forest Soil	MPDTASRPPLPPLPQSFDDPLGRKIIELHVWSVGEGLRG
Ga0257160_10028141	3300026489	Soil	MPDTASPSPLPPLLQSFDDPLGRKIIELHVWAVGEGLRGTEVAPLFDGLCQRL
Ga0307482_11749062	3300030730	Hardwood Forest Soil	MPAPPSSSPPRSPDGLVGRKIIELHVWAVGEGLRGIAAEPLFDGLCQRLVGAGVPVWRAF
Ga0170823_120631391	3300031128	Forest Soil	MPATPPLSRTPPLPLRYDEPLGQKIIELHVWAVGEGLSGTEAAQL
Ga0318541_106719531	3300031545	Soil	MPDTARPSALRPLPQSFDEPLGRKIIEMHVWAVGEGLRGTEAAPLFEGFC
Ga0318528_102119642	3300031561	Soil	MPSPPLSFDGPLGRKIVELHVWAVGEGLRGIDAASL
Ga0310915_108276301	3300031573	Soil	MPDTASPSPLPPLLQSFDAPLGRKIIELHVWAVGEGLRGTEAAALFDSLCQHLVNTGVPLSRAFAGMRTLH
Ga0310915_112415091	3300031573	Soil	MPDTASPSPLPPLLQSFDAPLGRKIIELHVWAVGEGLRGTEAAALFD
Ga0318542_104445391	3300031668	Soil	MLDPLTPSRMPALPGSFDDPLGRKIIDLHVWAVGEGLRGAEAAALF
Ga0318561_101485131	3300031679	Soil	MPDTASPSPLPPLLQSFDAPLGRKIIELHVWAVGEGLRGTEAAALFDSLCQHLVNTGVPL
Ga0318561_107788081	3300031679	Soil	MPDTARPSALRPLPQSFDEPLGRKIIEMHVWAVGEGLRGTEAAP
Ga0318574_100729621	3300031680	Soil	MPDTASPSPLPPLLQSFDAPLGRKIIELHVWAVGEGLRGTEAAALFDSLCQHLVN
Ga0318572_104523612	3300031681	Soil	MPDTANPSPLSPLLQSFDDPLGRKIIELHVWAVRE
Ga0318496_104117441	3300031713	Soil	MPDIASPPPLPPLPQSFDDPLGRKIIELHVWSVGEGLRGREAALLFDG
Ga0306917_101487121	3300031719	Soil	MPDTASPSPLPPLLQSFDAPLGRKIIELHVWAVGEGLRGTEAAALFDSLCQHLVNT
Ga0306917_102533301	3300031719	Soil	MPDTASPSPLRPLPQSFDEPLGRKIIEMHVWAVGEGLRGTEAAPLFEGFCRRLV
Ga0306917_106080391	3300031719	Soil	MHDMPPPSRMPSPPLSFDGPLGRKIIELHVWAVGEGLRGTEAAPLFDGLCQRLVTAGLPL
Ga0306917_111149881	3300031719	Soil	MPDIASPPPLPPLPQSFDDPLGRKIIELHVWSVGEGLRGKEAALLFDGLCQ
Ga0306917_111454501	3300031719	Soil	MPPPLSFDDPLGRKIIELHVWAVGEGLRGTGAAALFDG
Ga0318493_107439901	3300031723	Soil	MPDSASPPPLPPLPQSFDDPLGRKIIELHVWSVGEG
Ga0318500_102726731	3300031724	Soil	MPDTLRPPPMPPLSQSFDAPLGRKIIELHVWAVGEGLRGTDAAALF
Ga0318501_103036751	3300031736	Soil	MHDMPPPSRMPSPPLSFDGPLGRKIIELHVWAVGEGLRGTEAAPLFDGLCQR
Ga0306918_101004543	3300031744	Soil	MPDTASPSPLPPLLQSFDAPLGRKIIELHVWAVGEGLRGTEAAALFDSLCQHL
Ga0306918_101764392	3300031744	Soil	MPPPLSFDDPLGRKIIELHVWAVGEGLRGTGAAALFDGLC
Ga0306918_109713191	3300031744	Soil	MPDKPPLSPMPSLPLSFDGPLGQKIIELHVWAVGEGLRGAEA
Ga0318502_104854382	3300031747	Soil	MTDRPRPSELPPLPLSFDGPLGQKIIELYVWAVGEGLR
Ga0318492_107785881	3300031748	Soil	MTDRPRPSELPPLPLSFDGPLGQKIIELYVWAVGEGLRGTDAAALFDG
Ga0318537_103193601	3300031763	Soil	MPDIASPPPLPPLPQSFDDPLGRKIIELHVWSVGEGLRGKKAALLF
Ga0318509_101072361	3300031768	Soil	MHDMPPPSRMPSPPLSFDGPLGRKIIELHVWAVGEGLRGTEAAPLFDGLCQRLV
Ga0318509_103371591	3300031768	Soil	MPDIASPPPLPPLPQSFDDPLGRKIIELHVWSVGEGLRG
Ga0318546_112284531	3300031771	Soil	MPDTASPSPLPPLLQSFDAPLGRKIIELHVWAVGEGLRGTEAAALFDSLCQHLV
Ga0318543_100806401	3300031777	Soil	MERALMPDTPPLSPMPPLPLSFDDPLGQKIIELHVWAVGEGLRGTE
Ga0318543_102458741	3300031777	Soil	MPDTASPSPLPPLLQSFDAPLGRKIIELHVWAVGEGLRGTEAAALFDSLCQHLVNTGV
Ga0318543_104041062	3300031777	Soil	MPDIASPPPLPPLPQSFDDPLGRKIIELHVWSVGEGLRGREA
Ga0318566_102241281	3300031779	Soil	MPDIASPPPLPPLPQSFDDPLGRKIIELHVWSVGEGLRGRE
Ga0318566_105493061	3300031779	Soil	MPDTASPSPLPPLLQSFDAPLGRKIIELHVWAVGEGLRGTEAAALFDSLCQH
Ga0318547_104496072	3300031781	Soil	MREMPTPAPLPPLPTTFDEPLGRKIIELHVWAVGEGLRG
Ga0318552_102183951	3300031782	Soil	MPDTASPSLLQSFDDPLGRKIIELHVWAVGEGLRGTEVAP
Ga0318576_100718123	3300031796	Soil	MREMPTPAPLPPLPTTFDEPLGRKIIELHVWAVGEGLRGT
Ga0318576_103925161	3300031796	Soil	MHDMPPPSRMPSPPLSFDGPLGRKIIELHVWAVGEGLRGTEAAPLF
Ga0318576_106275961	3300031796	Soil	MPDTASPSLLQSFDDPLGRKIIELHVWAVGEGLRG
Ga0318550_106631661	3300031797	Soil	MPDIASPPPLPPLPQSFDDPLGRKIIELHVWSVGEGLRGKEAALLFDGLCQRLV
Ga0318497_102706471	3300031805	Soil	MPDTASPPSLSPLPRSFDDPLGRKIIELHVWSVGEG
Ga0318568_102710853	3300031819	Soil	MERALMPDTPPLSPMPPLPLSFDDPLGQKIIELHVWAVGEGLRGTEAAP
Ga0318568_110565131	3300031819	Soil	MPDIASPPPLPPLPQSFDDPLGRKIIELHVWSVGEGLRGREAALLFDGLCQR
Ga0318499_104323791	3300031832	Soil	MPDTASPSPLRPLPQSFDEPLGRKIIEMHVWAVGEGLRGTEAAPLFE
Ga0318517_103234931	3300031835	Soil	MPDTASPSPLPPLLQSFDAPLGRKIIELHVWAVGEGLRGTEAAAL
Ga0318511_105924261	3300031845	Soil	MPDTASPSPLPPLLQSFDAPLGRKIIELHVWAVGEGLRGTEAAALFDSL
Ga0318512_100940952	3300031846	Soil	MTDRPRPSELPPLPLSFDGPLGQKIIELYVWAVGEGLRGTDAAA
Ga0318527_100263544	3300031859	Soil	MPDTASPSPLPPLLQSFDAPLGRKIIELHVWAVGDGLRGTEAA
Ga0318527_102790533	3300031859	Soil	MPDTASPSPLPPLLQSFDAPLGRKIIELHVWAVGEGLRGTEAAALFDSLCQHLVNTG
Ga0318527_104205101	3300031859	Soil	MPDTARPSALRPLPQSFDEPLGRKIIEMHVWAVGEGLRGTEAAPLFEGFCRRLV
Ga0318495_103418851	3300031860	Soil	MPDTASRPPLPTLPQSFGDPLGRKIIELHVWSVGEGPRGTEAALLFDGLCQRLV
Ga0306925_101364431	3300031890	Soil	MPDIASPPPLPPLPQSFDDPLGRKIIELHVWSVGEGL
Ga0306925_102571901	3300031890	Soil	MPDTASPSPLPPLLQSFDAPLGRKIIELHVWAVGEGLRGTEAAALF
Ga0306925_120633991	3300031890	Soil	MLDPLTPSRMPALPGSFDDPLGRKIIDLHVWAVGEGL
Ga0318536_101155901	3300031893	Soil	MPDSASPPPLPPLPQSFDDPLGRKIIELHVWSVGEGLRG
Ga0318536_103643861	3300031893	Soil	MPDIASPPPLPPLPQSFDDPLGRKIIELHVWSVGEGLRGREAALLFDVLCQ
Ga0306923_107417821	3300031910	Soil	MPDTARPSALRPLPQSFDEPLGRKIIEMHVWAVGEGLRGTEAAPLFEGFCRR
Ga0306921_123302192	3300031912	Soil	MPDTPRLSRIPLLPLTFDGPLGQKIIELHVWAVGEGLRGTDAAAF
Ga0306921_127309022	3300031912	Soil	MPATPPLSRIPLLPLSYDEPLGQKIIELHVWAVSEGL
Ga0310916_100386481	3300031942	Soil	MPDIASPPPLPPLPQSFDDPLGRKIIELHVWSVGEGLRGKEAALLF
Ga0310913_111364611	3300031945	Soil	MPDTASRPPLPTLPQSFGDPLGRKIIELHVWSVGEGPRGTEAALLFD
Ga0306926_103122153	3300031954	Soil	MPDKPPLSPMPSLPLSFDGPLGQKIIELHVWAVGEGLRGAEAAALFDGL
Ga0306926_106695963	3300031954	Soil	MPDTARPSALRPLPQSFDEPLGRKIIEMHVWAVGEGLRGTE
Ga0306926_110763573	3300031954	Soil	MPDIASPPPLPPLPQSFDDPLGRKIIELHVWSVVEGL
Ga0307479_102717512	3300031962	Hardwood Forest Soil	MTDRPRPSELPPLPLSFDGPLGQKIIELYVWAVGEGLRGTDAAALFDGLCQRLVDAGVP
Ga0318531_104641691	3300031981	Soil	MPDIASPPPLPPLPQSFDDPLGRKIIELHVWSVGEGLRGKKAALLFDGLC
Ga0306922_107608241	3300032001	Soil	MPDIASPPPLPPLPQSFDDPLGRKIIELHVWSVGEGLRGKEAALLFDGLCQRL
Ga0318569_104718221	3300032010	Soil	MERALMPDTPPLSPMPSLPLSFDGPLGRKIIELHVW
Ga0310911_101191322	3300032035	Soil	MPATPPLSRISPLPLSYDEPLRLKVIELHVWAVSEGLRGTEAA
Ga0318559_101790731	3300032039	Soil	MPEVPPSARMPPLPQSFDAPLGRKIIELHVWAVGEGLRGAEAAALFDGLCQRLVSAGVP
Ga0318545_101176131	3300032042	Soil	MPDTANPSPLSPLLQSFDDPLGRKIIELHVWAVREGLRGTEAAALFDG
Ga0318545_101489021	3300032042	Soil	MERALMPDTPPLSPMPSLPLSFDGPLGRKIIELHVWAVG
Ga0318556_107613661	3300032043	Soil	MREMPTPAPLPPLPTTFDEPLGRKIIELHVWAVGEGLR
Ga0318506_105705101	3300032052	Soil	MPDIASPPPLPPLPQSFDDPLGRKIIELHVWSVGEGLRGREAALL
Ga0318575_100457241	3300032055	Soil	MPDTASPSPLPPMPQSFDEPLGRKIIEMHVWAVGEGLRG
Ga0318533_101195061	3300032059	Soil	MHDMPPPSRMPSPPLSFDGPLGRKIIELHVWAVGEGLRGTEAAPL
Ga0306924_114984342	3300032076	Soil	MPDTARPSALRPLPQSFDEPLGRKIIEMHVWAVGEGLRGTEAAPL
Ga0306924_116972601	3300032076	Soil	MPDTLRPPPMTPLPESFDAPLGRKIIELHVWAVGEDCAAPA
Ga0306924_122689682	3300032076	Soil	MGNLSPMPPLPLSFDGPLGRKIIDLHIWAVSEGLRWTEAA
Ga0318518_106266321	3300032090	Soil	MPDTASPSPLRPLPQSFDEPLGRKIIEMHVWAVGEGLRGTEAAPLFEGFCRRLVDAGVPL
Ga0318577_100363813	3300032091	Soil	MTDRPRPSELPPLPLSFDGPLGQKIIELYVWAVGEGLRGTDAAALFDGLC
Ga0318540_102242671	3300032094	Soil	MPDTASPSPLPPLLQSFDAPLGRKIIELHVWAVGEGLRGTEAA
Ga0306920_1010840501	3300032261	Soil	MPDTASPSPLRPLPQSFDEPLGRKIIEMHVWAVGEGLRG
Ga0310914_103397283	3300033289	Soil	MPDTASPSPLPPLLQSFDAPLGRKIIELHVWVVGEGLR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F072931

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences