Metagenome Family F072885

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F072885
Family Type	Metagenome
Number of Sequences	121
Average Sequence Length	85 residues
Representative Sequence	MPLLARDTTRVVSRRQEDFNLADRFFGRALTAFIYQITQRDVIYFVFLLLAIAGRASWILHIFFAFSVITLLFRLFRKSWRLAAEMH
Number of Associated Samples	116
Number of Associated Scaffolds	121

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	95.87 %
% of genes from short scaffolds (< 2000 bps)	89.26 %
Associated GOLD sequencing projects	110
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.34

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (98.347 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (19.835 % of family members)
Environment Ontology (ENVO)	Unclassified (43.802 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (44.628 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 68.70% β-sheet: 0.00% Coil/Unstructured: 31.30%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.34
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.34
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 121 Family Scaffolds
PF01066	CDP-OH_P_transf	21.49
PF00005	ABC_tran	0.83
PF09334	tRNA-synt_1g	0.83
PF16576	HlyD_D23	0.83

COG ID	Name	Functional Category	% Frequency in 121 Family Scaffolds
COG0558	Phosphatidylglycerophosphate synthase	Lipid transport and metabolism [I]	21.49
COG1183	Phosphatidylserine synthase	Lipid transport and metabolism [I]	21.49
COG5050	sn-1,2-diacylglycerol ethanolamine- and cholinephosphotranferases	Lipid transport and metabolism [I]	21.49
COG0018	Arginyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.83
COG0060	Isoleucyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.83
COG0143	Methionyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.83
COG0215	Cysteinyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.83
COG0495	Leucyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.83
COG0525	Valyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.35 %
Unclassified	root	N/A	1.65 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.35 %
Unclassified	root	N/A	1.65 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.35 %
Unclassified	root	N/A	1.65 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	90.08 %
Unclassified	root	N/A	1.65 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	90.08 %
Unclassified	root	N/A	1.65 %

Name	Rank	Taxonomy	Distribution
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	89.26 %
Unclassified	root	N/A	1.65 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	0.83 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	89.26 %
Unclassified	root	N/A	1.65 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	0.83 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	89.26 %
Unclassified	root	N/A	1.65 %
Verrucomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	0.83 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	89.26 %
Unclassified	root	N/A	1.65 %
Verrucomicrobium	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Verrucomicrobium	0.83 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	89.26 %
Unclassified	root	N/A	1.65 %
unclassified Verrucomicrobium	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Verrucomicrobium → unclassified Verrucomicrobium	0.83 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	89.26 %
Unclassified	root	N/A	1.65 %
Verrucomicrobium sp. GAS474	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Verrucomicrobium → unclassified Verrucomicrobium → Verrucomicrobium sp. GAS474	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2166559005\|cont_contig13017	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1458	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_100867161	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	598	Open in IMG/M
3300000651\|AP72_2010_repI_A10DRAFT_1022920	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	798	Open in IMG/M
3300000890\|JGI11643J12802_10633111	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	759	Open in IMG/M
3300000891\|JGI10214J12806_13059138	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	556	Open in IMG/M
3300000893\|AP72_2010_repI_A001DRAFT_1025044	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	953	Open in IMG/M
3300004114\|Ga0062593_101353146	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	758	Open in IMG/M
3300004479\|Ga0062595_102151672	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	545	Open in IMG/M
3300005289\|Ga0065704_10153792	All Organisms → cellular organisms → Bacteria	1408	Open in IMG/M
3300005293\|Ga0065715_10230075	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1231	Open in IMG/M
3300005328\|Ga0070676_10515576	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	851	Open in IMG/M
3300005337\|Ga0070682_100436885	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	999	Open in IMG/M
3300005354\|Ga0070675_101059744	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	745	Open in IMG/M
3300005365\|Ga0070688_100326466	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1117	Open in IMG/M
3300005438\|Ga0070701_11309665	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	518	Open in IMG/M
3300005441\|Ga0070700_100080772	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2099	Open in IMG/M
3300005445\|Ga0070708_101487459	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	631	Open in IMG/M
3300005548\|Ga0070665_102194813	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	556	Open in IMG/M
3300005564\|Ga0070664_100879430	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	840	Open in IMG/M
3300005577\|Ga0068857_100274466	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1550	Open in IMG/M
3300005713\|Ga0066905_100725031	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	855	Open in IMG/M
3300005764\|Ga0066903_101001574	All Organisms → cellular organisms → Bacteria	1527	Open in IMG/M
3300005842\|Ga0068858_101889883	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	590	Open in IMG/M
3300007255\|Ga0099791_10079562	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1493	Open in IMG/M
3300009098\|Ga0105245_10285265	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1615	Open in IMG/M
3300009174\|Ga0105241_10368619	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1252	Open in IMG/M
3300009177\|Ga0105248_11711564	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	713	Open in IMG/M
3300010040\|Ga0126308_10036033	All Organisms → cellular organisms → Bacteria	2797	Open in IMG/M
3300010043\|Ga0126380_11546857	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	589	Open in IMG/M
3300010301\|Ga0134070_10424789	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	528	Open in IMG/M
3300010325\|Ga0134064_10228580	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	679	Open in IMG/M
3300010333\|Ga0134080_10484841	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	585	Open in IMG/M
3300010335\|Ga0134063_10265102	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	820	Open in IMG/M
3300010335\|Ga0134063_10739247	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	511	Open in IMG/M
3300010336\|Ga0134071_10217750	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	945	Open in IMG/M
3300010358\|Ga0126370_11542827	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	633	Open in IMG/M
3300010366\|Ga0126379_12426002	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	624	Open in IMG/M
3300010401\|Ga0134121_11979307	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	614	Open in IMG/M
3300011119\|Ga0105246_11778308	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	588	Open in IMG/M
3300012201\|Ga0137365_11338730	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	506	Open in IMG/M
3300012202\|Ga0137363_11365361	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	598	Open in IMG/M
3300012205\|Ga0137362_11598167	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	539	Open in IMG/M
3300012208\|Ga0137376_10523857	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1028	Open in IMG/M
3300012210\|Ga0137378_11403835	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	612	Open in IMG/M
3300012354\|Ga0137366_11070488	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	557	Open in IMG/M
3300012359\|Ga0137385_10726066	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	829	Open in IMG/M
3300012683\|Ga0137398_10304029	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1073	Open in IMG/M
3300012915\|Ga0157302_10044952	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1226	Open in IMG/M
3300012922\|Ga0137394_10827995	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	775	Open in IMG/M
3300012924\|Ga0137413_10510239	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	886	Open in IMG/M
3300012925\|Ga0137419_11224710	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	629	Open in IMG/M
3300012957\|Ga0164303_11002309	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	594	Open in IMG/M
3300012958\|Ga0164299_10389736	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	891	Open in IMG/M
3300012971\|Ga0126369_12684099	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	582	Open in IMG/M
3300012972\|Ga0134077_10038496	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1729	Open in IMG/M
3300012976\|Ga0134076_10336425	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	661	Open in IMG/M
3300012989\|Ga0164305_11457134	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	605	Open in IMG/M
3300013096\|Ga0157307_1164820	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	526	Open in IMG/M
3300013102\|Ga0157371_11132807	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	601	Open in IMG/M
3300013306\|Ga0163162_11572757	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	750	Open in IMG/M
3300014150\|Ga0134081_10117028	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	851	Open in IMG/M
3300014326\|Ga0157380_11240187	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	791	Open in IMG/M
3300014969\|Ga0157376_10376701	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1366	Open in IMG/M
3300015358\|Ga0134089_10469108	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	547	Open in IMG/M
3300015359\|Ga0134085_10536923	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	538	Open in IMG/M
3300015371\|Ga0132258_12774819	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1221	Open in IMG/M
3300015372\|Ga0132256_100165839	All Organisms → cellular organisms → Bacteria	2231	Open in IMG/M
3300015373\|Ga0132257_100101637	All Organisms → cellular organisms → Bacteria	3310	Open in IMG/M
3300015373\|Ga0132257_104147633	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	527	Open in IMG/M
3300015374\|Ga0132255_102426071	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	801	Open in IMG/M
3300015374\|Ga0132255_102447344	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	797	Open in IMG/M
3300018000\|Ga0184604_10162624	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	744	Open in IMG/M
3300018028\|Ga0184608_10324047	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	677	Open in IMG/M
3300018051\|Ga0184620_10284388	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	557	Open in IMG/M
3300018051\|Ga0184620_10296183	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	545	Open in IMG/M
3300018073\|Ga0184624_10399946	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	610	Open in IMG/M
3300019868\|Ga0193720_1041269	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	656	Open in IMG/M
3300019878\|Ga0193715_1066607	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	760	Open in IMG/M
3300019885\|Ga0193747_1156535	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	514	Open in IMG/M
3300020006\|Ga0193735_1076470	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	961	Open in IMG/M
3300020010\|Ga0193749_1007862	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2068	Open in IMG/M
3300020012\|Ga0193732_1076459	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	547	Open in IMG/M
3300020015\|Ga0193734_1010919	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1704	Open in IMG/M
3300020015\|Ga0193734_1088398	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	524	Open in IMG/M
3300020062\|Ga0193724_1104035	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	573	Open in IMG/M
3300021078\|Ga0210381_10012809	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2079	Open in IMG/M
3300021344\|Ga0193719_10180828	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	904	Open in IMG/M
3300021560\|Ga0126371_11691496	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	757	Open in IMG/M
3300023058\|Ga0193714_1028019	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	829	Open in IMG/M
3300025315\|Ga0207697_10008159	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Verrucomicrobium → unclassified Verrucomicrobium → Verrucomicrobium sp. GAS474	4608	Open in IMG/M
3300025885\|Ga0207653_10350370	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	577	Open in IMG/M
3300025901\|Ga0207688_11024924	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	521	Open in IMG/M
3300025911\|Ga0207654_10191220	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1341	Open in IMG/M
3300025928\|Ga0207700_11916024	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	519	Open in IMG/M
3300025932\|Ga0207690_10752364	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	803	Open in IMG/M
3300025933\|Ga0207706_10834495	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	781	Open in IMG/M
3300025939\|Ga0207665_11429266	All Organisms → cellular organisms → Bacteria	550	Open in IMG/M
3300025945\|Ga0207679_11741672	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	570	Open in IMG/M
3300025986\|Ga0207658_10937604	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	789	Open in IMG/M
3300026023\|Ga0207677_10245432	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1451	Open in IMG/M
3300026088\|Ga0207641_10501967	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1178	Open in IMG/M
3300026095\|Ga0207676_12093104	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	564	Open in IMG/M
3300026324\|Ga0209470_1247319	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	717	Open in IMG/M
3300026529\|Ga0209806_1029655	All Organisms → cellular organisms → Bacteria	2726	Open in IMG/M
3300026547\|Ga0209156_10131560	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1221	Open in IMG/M
3300028381\|Ga0268264_10069057	All Organisms → cellular organisms → Bacteria	2988	Open in IMG/M
3300028713\|Ga0307303_10167147	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	534	Open in IMG/M
3300028755\|Ga0307316_10344864	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	548	Open in IMG/M
3300028792\|Ga0307504_10448785	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	517	Open in IMG/M
3300028807\|Ga0307305_10319408	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	706	Open in IMG/M
3300031231\|Ga0170824_110925592	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1385	Open in IMG/M
3300031366\|Ga0307506_10404471	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	560	Open in IMG/M
3300031446\|Ga0170820_16342102	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	922	Open in IMG/M
3300031474\|Ga0170818_100513571	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	615	Open in IMG/M
3300031716\|Ga0310813_10435725	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1134	Open in IMG/M
3300031720\|Ga0307469_10044698	All Organisms → cellular organisms → Bacteria	2727	Open in IMG/M
3300031740\|Ga0307468_101948825	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	561	Open in IMG/M
3300031942\|Ga0310916_10588115	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	946	Open in IMG/M
3300033412\|Ga0310810_10184714	All Organisms → cellular organisms → Bacteria	2377	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	71.07%
Host-Associated	Host-Associated	28.10%
Engineered	Engineered	0.83%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	66.12%
Plants	Host-Associated → Plants	28.10%
Aquatic	Environmental → Aquatic	4.96%
Modeled	Engineered → Modeled	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	66.12%
Rhizosphere	Host-Associated → Plants → Rhizosphere	14.88%
Rhizoplane	Host-Associated → Plants → Rhizoplane	13.22%
Sediment	Environmental → Aquatic → Sediment	4.13%
Freshwater	Environmental → Aquatic → Freshwater	0.83%
Simulated Communities (Sequence Read Mixture)	Engineered → Modeled → Simulated Communities (Sequence Read Mixture)	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	57.85%
Loam	Environmental → Terrestrial → Soil → Loam	8.26%
Soil	Host-Associated → Plants → Rhizosphere → Soil	8.26%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	7.44%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.61%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	5.79%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.13%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.83%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	44.63%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	8.26%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	7.44%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	6.61%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.61%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.61%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	5.79%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.96%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.13%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.65%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.65%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.83%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	19.83%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	9.92%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	9.09%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.96%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.96%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	4.13%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.13%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	4.13%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	4.13%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.31%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	3.31%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.65%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.65%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.65%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.65%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.65%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.65%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.65%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.83%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.83%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.83%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.83%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.83%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.83%
Simulated	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified → Simulated	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2166559005	Simulated microbial communities from Lyon, France	Engineered	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000651	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A10	Environmental	Open in IMG/M
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300000893	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A001	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013096	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018051	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300019868	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s1	Environmental	Open in IMG/M
3300019878	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2m2	Environmental	Open in IMG/M
3300019885	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1m2	Environmental	Open in IMG/M
3300020006	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m2	Environmental	Open in IMG/M
3300020010	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1s2	Environmental	Open in IMG/M
3300020012	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s1	Environmental	Open in IMG/M
3300020015	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m1	Environmental	Open in IMG/M
3300020062	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a1	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300023058	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2m1	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026529	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028713	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_184	Environmental	Open in IMG/M
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental	Open in IMG/M
3300028792	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_S	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031366	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 25_S	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
cont_0017.00001370	2166559005	Simulated	MPLFARDTTPAVSRRQEDFGLAERFFGRALTGFIFQITQRDVIYFVFLLLAIAGRASWILHIVFAFSVITLLFTSVQVGVGGWPRKYTGNGGR
INPhiseqgaiiFebDRAFT_1008671612	3300000364	Soil	RDTERVASRRKEDFNLAERFFGRVLTAFIYQITQRDVIYFVFFLLAIAGRASWILHIFFGFSVITLLFRLFRKSWRLRAEIH*
AP72_2010_repI_A10DRAFT_10229202	3300000651	Forest Soil	LAPLLARDTKPVVSRRQEDFNLAEHFFGRALTAFIHQITQRDVIYFVFLLLAIAGRASWILHISFAFSVITLLFRLFRKSWRQAVET*
JGI11643J12802_106331112	3300000890	Soil	DFNLAERFFGRALTAFIHQITQRDVIYFVFLLLAIAGRASWILHIFFAFSVITLFFRLFRKSWRQAAET*
JGI10214J12806_130591381	3300000891	Soil	MAGGLGRFLMPLLARDAKRVPSRRQKDFNLAERFFGRALTAFMYQITQRDVIFFVFLLLAIAGGASWILHIFFSFSVITLLFRLFRKSWRLPAEIH*
AP72_2010_repI_A001DRAFT_10250442	3300000893	Forest Soil	FFIMAGALGRYLAPLLARDTKPVVSRRQEDFNLAEHFFGRALTAFIHQITQRDVIYFVFLLLAIAGRASWILHISFAFSVITLLFRLFRKSWRQAVET*
Ga0062593_1013531461	3300004114	Soil	AERFFGRALTAFIHQITQRDVIYFLFLFLAIAGRASWILHIFFAFSVITLLFRLFRKSWRQAAET*
Ga0062595_1021516721	3300004479	Soil	LLARDTTRVVSRRQEDFNLADRFFGRALTAFIYQITQRDVIYFVFLLLAIAGRASWILHIFFAFSVITLLFRLFRKSWRLAAEVHC*
Ga0065704_101537923	3300005289	Switchgrass Rhizosphere	KRIVWRRQEDFNLAERFFGRALTAFIYQITQRDVIYFVFLVLAIAGRASWILHIFFAFSVITLLFRLFRKSWRLTAEIHS*
Ga0065715_102300752	3300005293	Miscanthus Rhizosphere	LARDTTRVVSRRQKDFNIAERFFGRALTAFIFQITQRDVIYFVFLLLAIAGRASWILHIVFAFSVISLLFRLFRRSWRLGWRDGKMHT*
Ga0070676_105155762	3300005328	Miscanthus Rhizosphere	LGRKLMALLAGDSKHVVWRRQEDFNLAKRFFGRALTAFIYQITQRDVIYFVFLVLAIAGRASWILHIFFAFSVITLLFRLFRRSLQLAAEIHW*
Ga0070682_1004368851	3300005337	Corn Rhizosphere	AERFFGRALTAFIYQITQRDVIYFVFLVLAIAGRASWILHIFFAFSVITLLFRLFRKSWRLTAET*
Ga0070675_1010597442	3300005354	Miscanthus Rhizosphere	LLESLIAFFILAGGLGRKLMALLAGDSKHVVWRRQEDFNLAKRFFGRALTAFIYQITQRDVIYFVFLVLAIAGRASWILHIFFAFSVITLLFRLFRKSWRLTAET*
Ga0070688_1003264661	3300005365	Switchgrass Rhizosphere	RRQEDFNLAERFFGRALTAFIHQITQRDVIYFVFLLLAIAGRVSWILHTFFAFSVITLLFRLFRKSWRRAAET*
Ga0070701_113096651	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	LARDTERVASRRQEDFNRAERFLSRTLIDFIYQITQRDVIYFVFLLLAIAGRASWILHIFFVFSVITLLFRLFRSWRPAAEIHG*
Ga0070700_1000807723	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	ITFLVMAGGLGRYLTPLLARDTERAVSRRQEDFNLAERFFGGALTAFIHQITQRDVIYFVFLVLAIAGRASWILHIFFTFSVITLLFRLFRKSWRQAAET*
Ga0070708_1014874592	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	PLLARDTTRVVSRRQEDFDVAGRFFGRALTAFIYQITQRDVIYFVFLLLAIAGRASWILHIVFAFSVITLLFRLFRSRIPKHSSKVRLA*
Ga0070665_1021948131	3300005548	Switchgrass Rhizosphere	LAERFFGRALTTFIHQITQRDVIYFVFLLLAIADRASWILHIFFTFSMITLLFRVFRKSWRQAAET*
Ga0070664_1008794301	3300005564	Corn Rhizosphere	LLESLITFFIMAGGFGRYLTPLLARDIGPVVSRRQEDFNLAERFFGRALTAFIHQITQRDVIYFVFLLLAIAGRVSWILHTFFAFSVITLLFRLFRKSWRRAAET*
Ga0068857_1002744661	3300005577	Corn Rhizosphere	RRQEDFNLAERFFGRALTAFIYQITQRDVIYFVFLVLAIAGRASWILHIFFAFSVITLLFRLFRKSWRLTAET*
Ga0066905_1007250311	3300005713	Tropical Forest Soil	MAGGLGRYRYGMALLARDTTRVVSRRQEDFAVAERFFGRGLTAFIFQITQRDVIYFVFLLLAIAGRASWILHILFAFSVISLIVSLFRKSWRQAAET*
Ga0066903_1010015742	3300005764	Tropical Forest Soil	RYLTPLLAGDTERVVSRRQEDFNLAERFFGRALTAFLHQITQRDVIYFVFLLLAIAGRASWILHIFFAFSVITLLFRLFRKSWRQAVET*
Ga0068858_1018898832	3300005842	Switchgrass Rhizosphere	RDTERVASRRQEDFNRAERFLSRTLIDFIYQITQRDVIYFVFLLLAIAGRASWILHIFFVFSVITLLFRLFRSWRLAAEIHG*
Ga0099791_100795622	3300007255	Vadose Zone Soil	LESLITFFIMAGGLGRYLMPLLARDTTRVASRRQEDFNLADRFFGRALTAFIFQITQRDVIYFVFLLLAIAGRASWILHIFFAFSVITLLFRLFRRSWRLAAEIHW*
Ga0105245_102852652	3300009098	Miscanthus Rhizosphere	RVASRRQEDFNRAERFLSRTLIDFIYQITQRDVIYFVFLLLAIAGRASWILHIFFVFSVITLLFRLFRSWRPAAEIHG*
Ga0105241_103686192	3300009174	Corn Rhizosphere	FIMAGGFGRFLMPLFAGDTKKAVSRRQEDFNLAERFFGGALAAFIHQITQRDVIYFVFLLLAIADRASWILHIFFTFSMITLLFRVFRKSWRQAAET*
Ga0105248_117115642	3300009177	Switchgrass Rhizosphere	GFGRFLMPLLARDTDRVVSRRQEDLNLAERFFGRALTAFIHQITQRDVIYFVFLVLAIAGRASWILHIFFTFSVITLLFRLFRKSWRQAAET*
Ga0126308_100360334	3300010040	Serpentine Soil	AERFFGRALTAFIHQISQRDVIYFVFLLLAIAGRASWILHIFFAFSLITLLFRLFRKSWRLAAEIVW*
Ga0126380_115468572	3300010043	Tropical Forest Soil	LGRYRYGMALLARDTTRVVSRRQEDFAVAERFFGRGLTAFIFQITQRDVIYFVFLLVAIAGRASWILHILFAFSVISLLVSLFRRSWRLAAET*
Ga0134070_104247892	3300010301	Grasslands Soil	PLLARDTTRVVSRRQEDFDVAERFFGRALTAFIFQITQRDVIYFVFLLLAIAGRASWILHIVFAFSLITLLFRLFRRSLRLATKIHW*
Ga0134064_102285801	3300010325	Grasslands Soil	ISRRQEDFNVAERFFGRALTAFIYQITQRDVIYFVFLLLAIAGRASWILHISFSFSVITLLFRLFRKSWRLRAEIH*
Ga0134080_104848411	3300010333	Grasslands Soil	PLLARDTTRVASRRQEDFGIAERFFGRALTAFIFQITQRDVIYFVFLLLAIAGRASWILHVVFAFSVITLLFRLFRRSLRLAAEIHS*
Ga0134063_102651021	3300010335	Grasslands Soil	LLESFITLCIMAGGLERFLMPLLARDDKRVASRRQEDFNMAERFFGRALIAFIYQITQRDVIYFVFLLLAIAGRASWILHIFFAFSVITLLFRLFRKSWRQAAET*
Ga0134063_107392472	3300010335	Grasslands Soil	RRQEDFHLAERFFGRALTAFIHQSTQRDVIYFVFLLLAIAGRASWILHIVFAFSAITLLFRLFRRSWRLAAEKHW*
Ga0134071_102177503	3300010336	Grasslands Soil	RDTKRVVSRRQEDFNLAERFFGHALTAFIYQITQRDVIYFVFLLLAIAGRASWILHIFLAFSVITLVFRLFRKSWRLAAEIHW*
Ga0126370_115428272	3300010358	Tropical Forest Soil	GFGRFFKPLLAGDPKPPVSRRIEDFNLAERFFGRALTVFIHQITQRDVIYFLFFLLAIAGRPSWILHILFAFSVITLLFRLFRKSWRQAVAT*
Ga0126379_124260022	3300010366	Tropical Forest Soil	PLLARDTERVASRRQEDFNLAERFFGRALTAFIHQITQRDVIYFVFLLLAIAGRASWILHIFFAFSVITLLFRLFRKSWRQAAET*
Ga0134121_119793072	3300010401	Terrestrial Soil	RRQEDFNRAERFLSRTLIDFIYQITQRDVIYFVFLLLAIAGRASWILHIFFVFSVITLLFRLFRSWRPAAEIHG*
Ga0105246_117783082	3300011119	Miscanthus Rhizosphere	ARDTERVASRRQEDFNRAERFLSRSLIDFIYQITQRDVIYFVFLLLAIAGRASWILHIFFVFSVITLLFRLFRSWRPAAEIHG*
Ga0137365_113387301	3300012201	Vadose Zone Soil	FLIMAGGLGRYLMPLLARDTERVVSRRQEDFNLVDRFLGRALPAFIFQITQRDVIYFVFLLLAIAGRASWILHIFFVFSVITLLFRLFRSRIPKHSSKVRLA*
Ga0137363_113653612	3300012202	Vadose Zone Soil	FFLMARGIGRYVMPLLARDTTRVLSRRQRDFDVAGRFFGRALTGFIFQITQRDVIYFVFLLLAIAGRASWILHIVFAFSVITLLFGLFRRRIPKHSSKVRLA*
Ga0137362_115981671	3300012205	Vadose Zone Soil	TTRVLSRRQEDFNLADRFFGRALTAFIYQITQRDVIYFVFLLLAIAGRASWILHIFFAFSVITLLFRLFRKSWPQKYTANAGR*
Ga0137376_105238571	3300012208	Vadose Zone Soil	GIGRYIMPLLARDTTRVVSRRQEDFDVAGRFFGRALTAVIFQITQRDVIYFVFLLLAIAGRASWILHIVFAFSVITLLFRLFRKSLRLTAEIHW*
Ga0137378_114038351	3300012210	Vadose Zone Soil	SLITFFLMARGLGRYVMPLLARDITSVVSRRQEDFGVAERFFGRALTAFIYQITQRDVIYFVFLLLAIAGRASWILHIVFAFSVISLLFRLFRKSLRLAAEIHW*
Ga0137366_110704882	3300012354	Vadose Zone Soil	QEDFNVAERFFGRALTAFIYQLSQRDVIYFVFLLLAIAGRASWILHIVFAFSVITLLFRLFRRSWRLAAEIHW*
Ga0137385_107260661	3300012359	Vadose Zone Soil	PLLARDTTRVVSRRQEDFNVAERFFGRALTAFIYQITQRDVIYFVFLLLAIAGRASWILHIVFAFSVITLLFRLFRRSWRLAAEIHC*
Ga0137398_103040292	3300012683	Vadose Zone Soil	RQEDFGVAERFFGRALTAFIFQITQRDVIYFVFLLLAIAGRASWILHIVFAFSVISLLFRLFRKSLRLAAEIHW*
Ga0157302_100449521	3300012915	Soil	EDFHRAERFLSRPLIDFIYQITQRDVIYFVFLLLAIAGRASWILHIFFVFSVITLLFRLFRSWRPAAEIHG*
Ga0137394_108279952	3300012922	Vadose Zone Soil	DTTRVVSRRQEDFNLADRFFGRALTAFIFQITQRDVIYFVFLLLAIAGRASWILHIVFAFSVITLLFRLFRRSWRLVAEIHW*
Ga0137413_105102392	3300012924	Vadose Zone Soil	GRFLMPLLARDTTRVVSRRQEDFNLADRFFGRALTAFIYQITQRDVIYFVFLLLAIAGRASWILHIFFAFSVITLLFRLFRKSWPQKYTANAGR*
Ga0137419_112247102	3300012925	Vadose Zone Soil	GRYVMPLLARDTTRVLSRRQKDFDVAGRFFGRALTGFIFQITQRDVIYFVFLLLAIAGLASWILHIFFAFSVITLLFRLFRSRIPKHSRKMRLP*
Ga0164303_110023092	3300012957	Soil	FLVPLLARDTTRAVSRRQEDFNLADRFFGRALTAFVYQITQRDVIYFVFLLLAIADRASWILHIFFAFSVITLLFRLFRKSWRLAAEIHS*
Ga0164299_103897361	3300012958	Soil	MAGGVGRFLVPLLARDTTRAVSRRQEDFNLADRFFGRALTAFIYQITQRDVIYFVFLLLAIVGRASWILHIFFAFSVITLLFRLFRKSWRLAAEIRS*
Ga0126369_126840992	3300012971	Tropical Forest Soil	GLGRYLMPLLARDTERVVSRRQEDFNLAERFFGRALTVFIYQITQRDVIYFVFLLLAIAGRASWILHIFFAFSVITLLFRLFRKSWRQAVET*
Ga0134077_100384962	3300012972	Grasslands Soil	GRYVMPLLARDTTRVVSRRQEDFGVAERFFGRALSAFIFQITQRDVIYFVFLLLAIAGRASWILHIVFAFSLITLLFRLFRRSLRLATEVHW*
Ga0134076_103364252	3300012976	Grasslands Soil	MAGGFCRYLMPLFARDTTRVVSRRQEDFGVAERFFGRALTAFFYQITQRDVIYFVFLLLAIAGRASWILHIVFAFSVITLLFRLLRRSWRLAAEIHY*
Ga0164307_105205732	3300012987	Soil	FFGRALTAFIFQITQRDVIYFVFLLLAIAGRASWILHIVFAFSVISLLFRLFRRSWRLGWRDGKMHT*
Ga0164305_114571342	3300012989	Soil	FLMPLLARDTTRVISRRQEDFNLADRFFGRALTAFIFQITQRDVIYFVFLLLAIAGHASWILHIFFAFSVITLLFRLFRKSWRLAAEIHS*
Ga0157307_11648202	3300013096	Soil	VVSRRQEDFNMADRFFGRALTGFIFQITQRDVIYFVFLLLAIAGCVSWILHIFFAFSVITLVFRLFRKSWQPAAETR*
Ga0157371_111328072	3300013102	Corn Rhizosphere	GGLGRKLMALLAGDSKHVVWRRQEDFNLAERFFGRALTAFIYQITQRDVIYFVFLVLAIAGRASWILHIVFAFSVITLLFRLFRKSWRLTAET*
Ga0163162_115727572	3300013306	Switchgrass Rhizosphere	FNLAERFFGRALTAFIHQITQRDVIYFLFLFLAIAGRASWILHIFFAFSVITLLFRLFRKSWRQAAET*
Ga0134081_101170281	3300014150	Grasslands Soil	LLESFITFCIMAGGLERFLMPLLARDDKRVASRRQEDFNMAERFFGRALIAFIYQITQRDVIYFVFLLLAIAGRASWILHIFFAFSVITLLFRLFRKSWRQAAET*
Ga0157380_112401871	3300014326	Switchgrass Rhizosphere	GFGRYLTPLLARDIGPVVSRRQEDFNLAERFFGGALTAFIHQITQRDVIYFVFLVLAIAGRASWILHIFFAFSVITLLFRLFRKSWRQAAET*
Ga0157376_103767011	3300014969	Miscanthus Rhizosphere	TFFIMAGGVGRFLMPLLARDTTRAVSRRQEDFNLADRFCGRALTAFIYQITQRDVIYFVFLLLAIADRASWILHIFFAFSMITLLFRLFRKSWRLAAEMH*
Ga0134089_104691082	3300015358	Grasslands Soil	FLMARGLGRYVMPLLAPDTTRVVSRRQEDFNVAERFFGRALTAFIFQITQRDVIFFVFLLLAIAGRASWILHIVFAFSVITLLFRLFRRSWRLAAEIHC*
Ga0134085_105369231	3300015359	Grasslands Soil	GGLGRYLMPLLARDTERVVSRRQEDFNLVDRFLGRTLPAFIFQITQRDVIYFVFLLLAIAGRASWILHIFFVFSVITLLFRLFRSRIPKHSSKVRLA*
Ga0132258_127748192	3300015371	Arabidopsis Rhizosphere	SRRQEDFNLADRFFGRALTAFIYQITQRDVIYFVFLLLAIAGRASWMLHIFFAFSVITLLFRLFRKSWRLAAEMR*
Ga0132256_1001658391	3300015372	Arabidopsis Rhizosphere	LADRFFGRALTAFIYQITQRDVIYFVFLLLAIAGRASWMLHIFFAFSVITLLFRLFRKSWRLAAEMR*
Ga0132257_1001016374	3300015373	Arabidopsis Rhizosphere	RQEDFNLADRFFGRALTAFIYQITQRDVIYFVFLLLAIAGRASWMLHIFFAFSVITLLFRLFRKSWRLAAEMR*
Ga0132257_1041476331	3300015373	Arabidopsis Rhizosphere	EDFNLADRFVGRALTAFIYQITQRDVIYFVFLLLAIVGRASWILHIFFAFSVITLLFRLFRKSWRLAAEMH*
Ga0132255_1024260712	3300015374	Arabidopsis Rhizosphere	LITFFIMAGGVGRFLMPLLARDTTRVISRRQEDFNLADRFFGRAPTAFIFQITQRDVIYFVFLLLAIAGHASWILHIFFAFSVITLLFRLFRKRWRLAAEIHS*
Ga0132255_1024473441	3300015374	Arabidopsis Rhizosphere	DTKGAVSRRQEDFNLADRFFGRALTAFVYQITQRDVIYFVFLLLAIADRASWILHIFFAFSVITLLFRLFRKSWRLAAEMH*
Ga0184604_101626241	3300018000	Groundwater Sediment	LITFFIMAGGLGRYLMPLLARDTTRVVSRRQEDFNLADRFFGRALTAFIYQITQRDVIYFVFLLLAIAGRASCILHIFFAFSVITLLFRLFRKNWPQKYTANASR
Ga0184608_103240471	3300018028	Groundwater Sediment	RDTTHAVSRRQEDFGVAERFFGRALTAFIFQITQRDVIYFVFLLLAIAGYASWILHIVFAFSVITLLFRLFRRSWRLAAEIHW
Ga0184620_102843882	3300018051	Groundwater Sediment	SRRQEDFHVAERFFGRALPAFIFQITQRDVIYFVFLLLAIAGRASWILHIFFAFSVVTLLFRLFRKSWRLAAEIHW
Ga0184620_102961831	3300018051	Groundwater Sediment	NLADRFFGRALTAFIFQITQRDVIYFVFLFLAIAGLASWILHIFFAFSVITLLFRLFRKSWRLAAEIHS
Ga0184624_103999461	3300018073	Groundwater Sediment	SLITFFIMAGGVGRFLMPLLARDTTRVASRRQEDFNLAERSFGRALPAFIFQITQRDVIYFVFLLLAIAGRASWILHIFFAFSVVTLLFRLFRKSWRLAAEIYW
Ga0193720_10412692	3300019868	Soil	LIAGDTKRVVSRRQEDFNLAERFFSRALTDFIFQITQRDVIYFVFLLLAIAGRASWILHIFFAFSVVTLLFRLFRKSWRLAAEIYW
Ga0193715_10666071	3300019878	Soil	LMARGLGRYVKPLLARDTTRVVSRRQKDFNIAERFFGRALTAFIFQITQRDVIYFVFLLLAIAGRASWILHIVFAFSVISLLFGLFRRSWRLGWRDGKMHT
Ga0193747_11565352	3300019885	Soil	SRRQEDFNVAERFFGRALTAFIFQITQRDVIYFVFLLLAIAGRASWILHIVFAFSVITLLFRLFRRSLRQAAEIHW
Ga0193735_10764701	3300020006	Soil	LMPLLARDTTRVVSRRQEDFNLVDRFFGRALTAFIFQITQRDVIYFVFLLLAIAGLASWILHIFFAFSVITLLFRLFRKSWRLAAEIHS
Ga0193749_10078624	3300020010	Soil	MPLLARDTTRVVSRRQEDFNLADRFFGRALTAFIYQITQRDVIYFVFLLLAIAGRASWILHIFFAFSVITLLFRLFRKSWRLAAEMH
Ga0193732_10764591	3300020012	Soil	RQKDFNLAECFFGRALTAFMYQITQRDVIYFVFLLLAIAGCASWILHIFFSFSVITLLFRLFRKSRRLPAEIH
Ga0193734_10109191	3300020015	Soil	THAVSRRQEDFGVAERFFGRALTAFIFQITQRDVIYFVFLLLAIAGYASWILHIVFAFSVITLLFRLFRRSWRLAAEIHW
Ga0193734_10883982	3300020015	Soil	EDFNLADRFFGRALTAFIYQITQRDVIYFVFLLLAIVGCASWILHIFFAFSVITLLFRLFRKSWRLAAEIHS
Ga0193724_11040352	3300020062	Soil	FNLVDRFFGRALTAFIYQITQRDVIYFVFLLLAIAGRASCILHIFFAFSVITLLFRLFRKNWPQKYTANASR
Ga0210381_100128093	3300021078	Groundwater Sediment	LEGLITFFIMAGGLGRYLMPLLARDTTRVVSRRQEDFNLADRFFGRALTAFIYQITQRDVIYFVFLLLAIAGRASWILHIFFAFSVITLLFRLFRKSWRLAAEVHC
Ga0193719_101808282	3300021344	Soil	RQEDFNVAERFFGRALTAFIFQLTQRDVIYFVFLLLAIAGRASWILHIVFAFSVITLLFRLFRRRWRLAAEMR
Ga0126371_116914962	3300021560	Tropical Forest Soil	LARDTERGVSRRQEDFNLAERFFGSALTAFIHQITQRDVIYFVFLLLAIAGLASWILHIFFAFSVITLVFRLFRKSWRQAAET
Ga0193714_10280191	3300023058	Soil	ADRFFGRALPAFIFQITQRDVIYFVFLLLAIAGHASWILHIVFAFSVITLLFRLIRRSLRLAAEIPW
Ga0207697_100081591	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	AGGVGRFLVPLLARDTERVASRRQEDFNRAERFLSRSLIDFIYQITQRDVIYFVFLLLAIAGRASWILHIFFVFSVITLLFRLFRSWRPAAEIHG
Ga0207653_103503701	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	ALLAGDSKHVVWRRQEDFNLAKRFFGRALTAFIYQITQRDVIYFVFLVLAIAGRASWILHIFFAFSVITLLFRLFRKSWRLTAET
Ga0207688_110249241	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	GRKLMALLAGDSKHVVWRRQEDFNLAKRFFGRALTAFIYQITQRDVIYFVFLVLAIAGRASWILHIFFAFSVITLLFRLFRKSWRLAAEMH
Ga0207654_101912201	3300025911	Corn Rhizosphere	FIMAGGFGRFLMPLFAGDTKKAVSRRQEDFNLAERFFGGALAAFIHQITQRDVIYFVFLLLAIADRASWILHIFFTFSMITLLFRVFRKSWRQAAET
Ga0207700_119160242	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	ITFFIMAGGVGRFFMPLLARDTERVASRRQEDFNRAERFLSRPLIDFIYQITQRDVIYLLFLLLAIAGRASWILHIVFAFSVITLLFRLFRRSRRLAVEIHW
Ga0207690_107523641	3300025932	Corn Rhizosphere	QEDFNLAERFFGGALTAFIHQITQRDVIYFVFLVLAIAGRASWILHIFFTFSVITLLFRLFRKSWRQAAET
Ga0207706_108344952	3300025933	Corn Rhizosphere	TGHVVSRRQEDFNLAERFFGRALTAFIHQITQRDVIYFLFLFLAIAGRASWILHIFFAFSVITLLFRLFRKSWRQAAET
Ga0207665_114292661	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	RQEDFNLAERFFGRALTAFIFQLTQRDVIYFVFLLLAIAGRASWILHIFFAFSVITLLFRLFRKSWRLRAEIH
Ga0207679_117416722	3300025945	Corn Rhizosphere	RDTERAVSRRQEDFNLAERFFGGALTAFIHQITQRDVIYFVFLVLAIAGRASWILHIFFAFSVITLLFRLFRKSWRLTAET
Ga0207658_109376041	3300025986	Switchgrass Rhizosphere	GVGRFLVPLLARDTERVASRRQEDFNRAERFLSRSLIDFIYQITQRDVIYFVFLLLAIAGRASWILHIFFVFSVITLLFRLFRSWRPAAEIHG
Ga0207677_102454321	3300026023	Miscanthus Rhizosphere	LVPLLARDTERVASRRQEDFNRAERFLSRSLIDFIYQITQRDVIYFVFLLLAIAGRASWILHIFFVFSVITLLFRLFRSWRPAAEIHG
Ga0207641_105019672	3300026088	Switchgrass Rhizosphere	QEDFNLAERFFGRALTAFIYQITQRDVIYFVFLVLAIAGRASWILHIFFAFSVITLLFRLFRKSWRLTAET
Ga0207676_120931042	3300026095	Switchgrass Rhizosphere	LTPLLARDIGPVVSRRQEDFNLAERFFGRALTAFIHQITQRDVIYFVFLLLAIAGRVSWILHTFFAFSVITLLFRLFRKSWRRAAET
Ga0209470_12473191	3300026324	Soil	EDFNMAERFFGRALIAFIYQITQRDVIYFVFLLLAIAGRASWILHIFFAFSVITLLFRLFRKSWRQAAET
Ga0209806_10296555	3300026529	Soil	VVSRRQEDFNVAERFFGRALTAFIYQITQRDVIYFVFLLLAIAGRASWILHIVFAFSVITLLFRLFRRSWRLAAEIHC
Ga0209156_101315602	3300026547	Soil	FLMPLLARDDKRVASRRQEDFNMAERFFGRALIAFIYQITQRDVIYFVFLLLAIAGRASWILHIFFAFSVITLLFRLFRKSWRQAAET
Ga0268266_123650031	3300028379	Switchgrass Rhizosphere	LAERFFGRALTTFIHQITQRDVIYFVFLLLAIADRASWILHIFFTFSMITLLFRVFRKSWRQAAET
Ga0268264_100690574	3300028381	Switchgrass Rhizosphere	YLLESLIAFFILAGGLGRKLMALLAGDSKHVVWRRQEDFNLAERFFGRALTAFIYQITQRDVIYFVFLVLAIAGRASWILHIFFAFSVITLLFRLFRKSWRLTAET
Ga0307303_101671472	3300028713	Soil	ADRFFGRALTAFIFQITQRDVIYFVFLLFAIAGRASWILHIFFVFSVITLLFRLFRKSWRLAAEIHS
Ga0307316_103448641	3300028755	Soil	DTTRVVSRRQEDFNLADRFFGRALTAFIYQITQRDVIYFVFLLLAIAGRSSWILHIFFAFSVITLLFRLFRKSWRLAAEIHS
Ga0307504_104487851	3300028792	Soil	LAERFFGRALPAFVFQITQRDVIYFVFLLLAIAGRASWILHIFFAFSVITLLFRLFRKSWRLAAEVHY
Ga0307305_103194081	3300028807	Soil	RYLMPLLAGDTTRLVSRRQEDFNVAERFFGRALTAFIFQITQRDVIYFVFLLLAIAGYASWILHIVFAFSVITLLFRLFRRSWRLAAEIHW
Ga0170824_1109255921	3300031231	Forest Soil	DFNLADRFFGRALTAFIYQITQRDVIYFVFLLLAIVRRASWILHIFFAFSVITLLFRLFRKSWRLAAEMH
Ga0307506_104044711	3300031366	Soil	AGGVGRFLMPLLARDTTRAVSRRQEDFNLADRFFGRALTAFIYQITQRDVIYFVFLLLAIADRASWILHIFFAFSVITLLFRLFRKSWRLAAEMH
Ga0170820_163421021	3300031446	Forest Soil	QEDFNLADRFFGRALTAFVFQITQRDVIYFGFLLLAIADRASWILHIFFAFSVITLLFRLFRKSWRLAAEMH
Ga0170818_1005135712	3300031474	Forest Soil	FLMPLLARDTTRAVSRRQEDFNLADRFFGRALTAFIYQITQRDVIYFVFLLLAIVGRASWILHIFFAFSVITLLFRLFRKSWRLAAEMHG
Ga0310813_104357251	3300031716	Soil	RQEDFNLAERFFGRALTTFIHQITQRDVIYFVFLLLAIADRASWILHIFFTFSMITLLFRVFRKSWRQAAET
Ga0307469_100446984	3300031720	Hardwood Forest Soil	DTTPAVSRRQEDFGLAERFFGRALTAFIFQITQRDVIYFVFLLLAIAGRASWILHIVFAVSVITLLFRLFRRSWRLAAEMHS
Ga0307468_1019488251	3300031740	Hardwood Forest Soil	ESLITFFIMAGGFGRYFTPLLARDTGPVVSRRQEDFNLAERFFGRALTAFIHQITQRDVIYFLFLLLAIAGRASWILHIVFAFSVITLLFRLFRSRIPKHSSKARLA
Ga0310916_105881151	3300031942	Soil	KRVVSRRQEDFNLAERFFGRALTAFIYQITQRDVIYFVFLLLAITGRASWILHIFFAFSVITLLFRLFRSRIPKHSSKVRLA
Ga0310810_101847143	3300033412	Soil	VSRRQEDFNLAERFFGRALTTFIHQITQRDVIYFVFLLLAIADRASWILHIFFTFSMITLLFRVFRKSWRQAAET

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F072885

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences