NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F072775

Metagenome Family F072775

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F072775
Family Type Metagenome
Number of Sequences 121
Average Sequence Length 95 residues
Representative Sequence MAREICFCGWVGELEDREPVYAGDGEWGLGCPMCGHLDRLEAWSEAARAWTLAEAARRRGSTVESRSDRRQYNEPPQAAARSLPPSASAEG
Number of Associated Samples 77
Number of Associated Scaffolds 121

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 61.98 %
% of genes near scaffold ends (potentially truncated) 28.93 %
% of genes from short scaffolds (< 2000 bps) 79.34 %
Associated GOLD sequencing projects 69
AlphaFold2 3D model prediction Yes
3D model pTM-score0.44

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (91.736 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere
(33.884 % of family members)
Environment Ontology (ENVO) Unclassified
(39.669 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(63.636 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 26.89%    β-sheet: 16.81%    Coil/Unstructured: 56.30%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.44
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 121 Family Scaffolds
PF07366SnoaL 32.23
PF04542Sigma70_r2 25.62
PF08281Sigma70_r4_2 17.36
PF02870Methyltransf_1N 7.44
PF08020DUF1706 4.96
PF06472ABC_membrane_2 1.65
PF03136Pup_ligase 1.65
PF02518HATPase_c 1.65
PF135322OG-FeII_Oxy_2 0.83
PF12690BsuPI 0.83

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 121 Family Scaffolds
COG0568DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)Transcription [K] 25.62
COG1191DNA-directed RNA polymerase specialized sigma subunitTranscription [K] 25.62
COG1595DNA-directed RNA polymerase specialized sigma subunit, sigma24 familyTranscription [K] 25.62
COG4941Predicted RNA polymerase sigma factor, contains C-terminal TPR domainTranscription [K] 25.62
COG0350DNA repair enzyme Ada (O6-methylguanine-DNA--protein-cysteine methyltransferase)Replication, recombination and repair [L] 7.44
COG4283Uncharacterized conserved protein DfsB/IRC4, DUF1706 (PF08020) domainGeneral function prediction only [R] 4.96

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms91.74 %
UnclassifiedrootN/A8.26 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000364|INPhiseqgaiiFebDRAFT_101957089All Organisms → cellular organisms → Bacteria965Open in IMG/M
3300000364|INPhiseqgaiiFebDRAFT_101957180All Organisms → cellular organisms → Bacteria1528Open in IMG/M
3300000364|INPhiseqgaiiFebDRAFT_101958959All Organisms → cellular organisms → Bacteria680Open in IMG/M
3300000787|JGI11643J11755_10891963All Organisms → cellular organisms → Bacteria639Open in IMG/M
3300005093|Ga0062594_102387855All Organisms → cellular organisms → Bacteria577Open in IMG/M
3300005174|Ga0066680_10013220All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia4311Open in IMG/M
3300005177|Ga0066690_10344029All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales1011Open in IMG/M
3300005295|Ga0065707_10659010All Organisms → cellular organisms → Bacteria659Open in IMG/M
3300005332|Ga0066388_101819033All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1084Open in IMG/M
3300005332|Ga0066388_104295030All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia726Open in IMG/M
3300005440|Ga0070705_100550983All Organisms → cellular organisms → Bacteria884Open in IMG/M
3300005445|Ga0070708_100021942All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia5410Open in IMG/M
3300005445|Ga0070708_100104651All Organisms → cellular organisms → Bacteria2595Open in IMG/M
3300005445|Ga0070708_100165551All Organisms → cellular organisms → Bacteria2062Open in IMG/M
3300005467|Ga0070706_100229805All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae1732Open in IMG/M
3300005468|Ga0070707_100535267All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae1134Open in IMG/M
3300005518|Ga0070699_100052275All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia3536Open in IMG/M
3300005518|Ga0070699_100163347All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae1972Open in IMG/M
3300005518|Ga0070699_100584663All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora → Saccharopolyspora erythraea1018Open in IMG/M
3300005536|Ga0070697_100166424All Organisms → cellular organisms → Bacteria1864Open in IMG/M
3300005536|Ga0070697_100380187All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1223Open in IMG/M
3300005536|Ga0070697_100434882All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales1141Open in IMG/M
3300005536|Ga0070697_101152455Not Available690Open in IMG/M
3300005536|Ga0070697_101174335All Organisms → cellular organisms → Bacteria684Open in IMG/M
3300005558|Ga0066698_10665550All Organisms → cellular organisms → Bacteria692Open in IMG/M
3300005764|Ga0066903_100481569All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia2092Open in IMG/M
3300005764|Ga0066903_107072311All Organisms → cellular organisms → Bacteria581Open in IMG/M
3300005844|Ga0068862_101118703All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae783Open in IMG/M
3300006049|Ga0075417_10152337All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae1076Open in IMG/M
3300006049|Ga0075417_10342204All Organisms → cellular organisms → Bacteria731Open in IMG/M
3300006163|Ga0070715_10794802Not Available574Open in IMG/M
3300006175|Ga0070712_100220905All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1500Open in IMG/M
3300006176|Ga0070765_100456802All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1197Open in IMG/M
3300006804|Ga0079221_11098868All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Actinomycetospora608Open in IMG/M
3300006844|Ga0075428_100997679All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales886Open in IMG/M
3300006845|Ga0075421_100324842All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae1864Open in IMG/M
3300006846|Ga0075430_101167663All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria634Open in IMG/M
3300006847|Ga0075431_100138517All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium2508Open in IMG/M
3300006847|Ga0075431_100390731All Organisms → cellular organisms → Bacteria1394Open in IMG/M
3300006852|Ga0075433_10441887All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales1147Open in IMG/M
3300006852|Ga0075433_10462902All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae1117Open in IMG/M
3300006852|Ga0075433_10559018All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae1005Open in IMG/M
3300006852|Ga0075433_10975136All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae739Open in IMG/M
3300006854|Ga0075425_100017133All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia7871Open in IMG/M
3300006854|Ga0075425_100152920All Organisms → cellular organisms → Bacteria2644Open in IMG/M
3300006854|Ga0075425_100674544All Organisms → cellular organisms → Bacteria1187Open in IMG/M
3300006871|Ga0075434_100095504All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae2978Open in IMG/M
3300006871|Ga0075434_100314379All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales1587Open in IMG/M
3300006880|Ga0075429_101340540All Organisms → cellular organisms → Bacteria624Open in IMG/M
3300006881|Ga0068865_101038758All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia719Open in IMG/M
3300006903|Ga0075426_11557331All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia503Open in IMG/M
3300006904|Ga0075424_100131194All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia2651Open in IMG/M
3300006904|Ga0075424_101152483All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria826Open in IMG/M
3300006904|Ga0075424_102578583Not Available532Open in IMG/M
3300006954|Ga0079219_10455832All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria875Open in IMG/M
3300006969|Ga0075419_10119923All Organisms → cellular organisms → Bacteria1703Open in IMG/M
3300007076|Ga0075435_100109899All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae2292Open in IMG/M
3300007076|Ga0075435_100994093All Organisms → cellular organisms → Bacteria732Open in IMG/M
3300009038|Ga0099829_11394976All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia579Open in IMG/M
3300009094|Ga0111539_10138299All Organisms → cellular organisms → Bacteria2852Open in IMG/M
3300009100|Ga0075418_10856139All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia982Open in IMG/M
3300009100|Ga0075418_11768354All Organisms → cellular organisms → Bacteria672Open in IMG/M
3300009143|Ga0099792_11008319All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Actinomycetospora556Open in IMG/M
3300009147|Ga0114129_10655679All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1354Open in IMG/M
3300009147|Ga0114129_11356423Not Available879Open in IMG/M
3300009147|Ga0114129_11621597All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria791Open in IMG/M
3300009147|Ga0114129_12698039All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia592Open in IMG/M
3300009156|Ga0111538_10494369All Organisms → cellular organisms → Bacteria1551Open in IMG/M
3300009156|Ga0111538_12255644All Organisms → cellular organisms → Bacteria684Open in IMG/M
3300009156|Ga0111538_12446745All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria655Open in IMG/M
3300009162|Ga0075423_10640894All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae1120Open in IMG/M
3300009162|Ga0075423_11040147Not Available871Open in IMG/M
3300009162|Ga0075423_11375261All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria755Open in IMG/M
3300009162|Ga0075423_13165471Not Available504Open in IMG/M
3300009177|Ga0105248_11247288All Organisms → cellular organisms → Bacteria → Terrabacteria group841Open in IMG/M
3300009553|Ga0105249_10803538All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora → Saccharopolyspora erythraea1005Open in IMG/M
3300009792|Ga0126374_10270602All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1121Open in IMG/M
3300010047|Ga0126382_10975014All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae740Open in IMG/M
3300010358|Ga0126370_11514767All Organisms → cellular organisms → Bacteria638Open in IMG/M
3300010360|Ga0126372_10003396All Organisms → cellular organisms → Bacteria7298Open in IMG/M
3300010398|Ga0126383_10670468Not Available1114Open in IMG/M
3300010399|Ga0134127_10003697All Organisms → cellular organisms → Bacteria11003Open in IMG/M
3300010400|Ga0134122_12854907All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium536Open in IMG/M
3300010403|Ga0134123_10007608All Organisms → cellular organisms → Bacteria7262Open in IMG/M
3300012203|Ga0137399_11057505All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria683Open in IMG/M
3300012917|Ga0137395_10817524All Organisms → cellular organisms → Bacteria675Open in IMG/M
3300012918|Ga0137396_10057171All Organisms → cellular organisms → Bacteria2692Open in IMG/M
3300012948|Ga0126375_11917130Not Available521Open in IMG/M
3300013297|Ga0157378_12340196All Organisms → cellular organisms → Bacteria586Open in IMG/M
3300013306|Ga0163162_12440509All Organisms → cellular organisms → Bacteria601Open in IMG/M
3300018468|Ga0066662_12078731Not Available595Open in IMG/M
3300020579|Ga0210407_10154930All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1767Open in IMG/M
3300025905|Ga0207685_10304156All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria790Open in IMG/M
3300025910|Ga0207684_10060625All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae3213Open in IMG/M
3300025910|Ga0207684_10199764All Organisms → cellular organisms → Bacteria1725Open in IMG/M
3300025910|Ga0207684_10341113Not Available1290Open in IMG/M
3300025915|Ga0207693_10029520All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria4331Open in IMG/M
3300025915|Ga0207693_10979635All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria646Open in IMG/M
3300025922|Ga0207646_10715165All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae895Open in IMG/M
3300026088|Ga0207641_10761582All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria956Open in IMG/M
3300026309|Ga0209055_1009043All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia5378Open in IMG/M
3300027873|Ga0209814_10195572All Organisms → cellular organisms → Bacteria873Open in IMG/M
3300027880|Ga0209481_10094065All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1442Open in IMG/M
3300027909|Ga0209382_12204016All Organisms → cellular organisms → Bacteria521Open in IMG/M
3300028047|Ga0209526_10030172All Organisms → cellular organisms → Bacteria3810Open in IMG/M
3300028906|Ga0308309_10197886All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1654Open in IMG/M
3300031720|Ga0307469_10027488All Organisms → cellular organisms → Bacteria3233Open in IMG/M
3300031720|Ga0307469_10063207All Organisms → cellular organisms → Bacteria2406Open in IMG/M
3300031720|Ga0307469_10211140All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1525Open in IMG/M
3300031720|Ga0307469_11334552All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales682Open in IMG/M
3300031720|Ga0307469_11610881All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia624Open in IMG/M
3300031740|Ga0307468_100005727All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria4338Open in IMG/M
3300031740|Ga0307468_100333397All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1121Open in IMG/M
3300031820|Ga0307473_10639218All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria740Open in IMG/M
3300032174|Ga0307470_10304884All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae1082Open in IMG/M
3300032174|Ga0307470_11135412All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia631Open in IMG/M
3300032180|Ga0307471_100098636All Organisms → cellular organisms → Bacteria2642Open in IMG/M
3300032180|Ga0307471_100272373All Organisms → cellular organisms → Bacteria1761Open in IMG/M
3300032180|Ga0307471_101519273All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria827Open in IMG/M
3300032180|Ga0307471_102751132All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Actinomycetospora → Actinomycetospora succinea624Open in IMG/M
3300032205|Ga0307472_101844562All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria602Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere33.88%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere19.01%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil12.40%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil6.61%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil4.96%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil4.13%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil3.31%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil2.48%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.65%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil1.65%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.65%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.65%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere0.83%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.83%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil0.83%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.83%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil0.83%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.83%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.83%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.83%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000364Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000787Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005174Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129EnvironmentalOpen in IMG/M
3300005177Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139EnvironmentalOpen in IMG/M
3300005295Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3EnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005518Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaGEnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005558Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005844Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2Host-AssociatedOpen in IMG/M
3300006049Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1Host-AssociatedOpen in IMG/M
3300006163Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaGEnvironmentalOpen in IMG/M
3300006175Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaGEnvironmentalOpen in IMG/M
3300006176Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5EnvironmentalOpen in IMG/M
3300006804Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200EnvironmentalOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300006846Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4Host-AssociatedOpen in IMG/M
3300006847Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5Host-AssociatedOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300006880Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3Host-AssociatedOpen in IMG/M
3300006881Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2Host-AssociatedOpen in IMG/M
3300006903Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300006954Agricultural soil microbial communities from Georgia to study Nitrogen management - GA ControlEnvironmentalOpen in IMG/M
3300006969Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3Host-AssociatedOpen in IMG/M
3300007076Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4Host-AssociatedOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009143Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2EnvironmentalOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300009792Tropical forest soil microbial communities from Panama - MetaG Plot_12EnvironmentalOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012917Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaGEnvironmentalOpen in IMG/M
3300012918Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaGEnvironmentalOpen in IMG/M
3300012948Tropical forest soil microbial communities from Panama - MetaG Plot_14EnvironmentalOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300020579Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-MEnvironmentalOpen in IMG/M
3300025905Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025915Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026088Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026309Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)EnvironmentalOpen in IMG/M
3300027873Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300027880Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)Host-AssociatedOpen in IMG/M
3300027909Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)Host-AssociatedOpen in IMG/M
3300028047Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300028906Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300032174Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
INPhiseqgaiiFebDRAFT_10195708923300000364SoilVKREINVAREICFCGWVGELEDREPVYAGDGEWGLGCPMCGHLDRLEAWSEAARSCTLAEAAWRRESTLELRSDREQHIPSLPPSASAGG*
INPhiseqgaiiFebDRAFT_10195718023300000364SoilMTHSRXPCTELHVKREIXVXREICFCGWVGELEDREPVYAGDGEWGLGCPMCGRLDRLEAWSEAARSCTLAEAAWRRESTLELRSDREQQKERSQAAAPSLPPSASAEG*
INPhiseqgaiiFebDRAFT_10195895923300000364SoilEICFCGWVGELEHREPVYSGDGEWGLGRPNCGHLDRLEAWSEAARXCTLAXAAWRRESTLELRXDREQHXPSLPPXASAXG*
JGI11643J11755_1089196323300000787SoilMHARTPCTASRGEINVAREICFCGWVGELEHREPVYSGDGEWGLGCPNCGHLDRLEAWSEAARCCTLAEAAWRRGSTLELRADREQHISSLPPSASAEG*
Ga0062594_10238785513300005093SoilMHARTPCTASREEGINVAREICFCGWVGELEDREPVYAGDGEWGLGCPNCGHLDRLEAWSEAARCCTLAEAAWRRGSTLELRANREQHVPSRPPSASAEG*
Ga0066680_1001322053300005174SoilMAREICFCGWVGEVEDREPVYAGAEEWGMRCPMCGHLDRLEGWSEAGRAWTLAEAARRRESTVELTSHRTHYNEPPEAAARSLLGSRLQRDDF*
Ga0066690_1034402933300005177SoilPVYAGAEEWGMRCPMCGHLDRLEGWSEAGRAWTLAEAARRRESTVELTSHRTHYNEPPEAAARSLLGSRLQRDDF*
Ga0065707_1065901013300005295Switchgrass RhizosphereREINVAREICFCGWVVELEDREPVYAGDGEWGLGCPNCGHLDRLEAWSEAARCCTLAKAAWRRGSTLELRADREQHVPSLPPSASAEG*
Ga0066388_10181903313300005332Tropical Forest SoilMHREITMARESCFCGWVGDLEDREPVYAGAGEWGLSCPMCGHLDRLEVWSEAARAWTLAEATRRRGSTVESGSDRRQCNEPSQAA
Ga0066388_10429503013300005332Tropical Forest SoilMAREICFCGWVGEVEDREPVYAGAGEWGLRCPMCGHLDRLEGWSEAARAWTLAEAARRRESTLELTSHRTHYNEPPQVAARSLLGSRLQRDDF*
Ga0070705_10055098323300005440Corn, Switchgrass And Miscanthus RhizosphereTHQAFGSASCTPGRPALLHVKRGINVAREICFCGWVGELEDREPVYAGDGEWGLGCPNCGHLDRLEAWSEAARCCTLAEAAWRRGSTLELRPNREQHVPSLPPSASAKG*
Ga0070708_10002194253300005445Corn, Switchgrass And Miscanthus RhizosphereMAREICFCGWVGEVEDREPVYAGAGEWGLRCPMCGHLDRLEGWSEAARAWTLAEAARRRESTVELTSHRTHYNEPPQAAARSLLGSRLQRDDF*
Ga0070708_10010465153300005445Corn, Switchgrass And Miscanthus RhizosphereMGRETNVAREICFCGWVGELEDREPTYAGDGEWGLGCPMCGHLDRLEAWSEAARSWILAEASRRRESTSESISDRGQHEERPQAATPPSPTRLC*
Ga0070708_10016555123300005445Corn, Switchgrass And Miscanthus RhizosphereMAREICFCGWVGEVEDREPVYVGDGEWGLGCPMCGHLDRLEAWSEAARSWTLAEAAWRRESTFEMRSDRAQDEDRPQAAAAPPPWSASAEG*
Ga0070706_10022980533300005467Corn, Switchgrass And Miscanthus RhizosphereMTHSRTPCIELHVKREINVAREICFCGWVGELEDREPVYAGDGEWGLGCPMCGHLDRLEAWSEAARSCTLAEAAWRRESTLESRSDREHHIPSLPPSASAEGWFHA*
Ga0070707_10053526713300005468Corn, Switchgrass And Miscanthus RhizosphereMARESCFCGWVGELEDRELVYAGAGEWGLGCPMCGHLDRLEAWSDAARAWVFAEAARRRESIIDSTSYRTHYDEPPQACEGRSHVWSRPNVYQ*
Ga0070699_10005227533300005518Corn, Switchgrass And Miscanthus RhizosphereMAREICFCGWVGEVEDREPVYAGAEEWGLRCPMCGHLDRLEGWSEAGRAWTLAEAARRRESTVELTSHRTHYNEPPEAAARSLLGSRLQRDDF*
Ga0070699_10016334723300005518Corn, Switchgrass And Miscanthus RhizosphereMHREITMARESCFCGWVGDLEDREPVYEGAGQWGLRCPMCGHLDRLEAWSEAARGWTLAEAARRRESTVESTSDRRLYSEPPQASVSSLPSPLLQRDDF*
Ga0070699_10058466313300005518Corn, Switchgrass And Miscanthus RhizosphereVKREINVAREICFCGWVGELEDREPVYAGDGEWGLGCPMCGHLDRLEAWSEAARSCVLAEAACRRESTLELRSGREQHISSRLPSASAEG*
Ga0070697_10016642443300005536Corn, Switchgrass And Miscanthus RhizosphereMGRETNVAREICFCGWVGELEDREPTYAGDGEWGLGCPMCGHLDRLEAWSEAARSWILAEASRRRESTSESISDRGQHEERPQAATPPSSHPPLLRDDVHVWDRGSA*
Ga0070697_10038018713300005536Corn, Switchgrass And Miscanthus RhizosphereMAREICFCGWVGEVEDREPVYVGDGEWGLGCPMCGHLDRLEAWSEAARSWTLAEAAWRRESTFEMRSDRAQDEDRPRAAAAPPPWSASAEG*
Ga0070697_10043488223300005536Corn, Switchgrass And Miscanthus RhizosphereMAREICFCGWVGEVEDREPVYAGAGEWGLRCPMCGHLDRLEGWSEAARAWTLAKAARRRESTVELTSHRTHYNEPPQAAARSLLGSRLQRDDF*
Ga0070697_10115245523300005536Corn, Switchgrass And Miscanthus RhizosphereREPVYAGDGEWGLGCPMCGHLDRLEAWSEAARSCTLAEAAWRRESTLESRSDREHHIPSLPPSASAEGWFHA*
Ga0070697_10117433513300005536Corn, Switchgrass And Miscanthus RhizosphereVHDAHPDALTTRREINVAREICFCGWIGELEDREPAYAGDGEWGLAYPMCGHLDRLEAWSEPARSLTLAEAARRRERTLELSPDRGRHEELRNATASSLPTSASAEDDFPLGPR*
Ga0066698_1066555023300005558SoilEINVAREICFCGWVGELEDREPVYAGDGGWGLGCPMCGHLDRLEAWSEAVRSCILAEAARRRESTLESRSDGERPQAVAPPSAHSPLLRNDVHVWDNWSS*
Ga0066903_10048156923300005764Tropical Forest SoilMARESCFCGWAGELEDRDLVYAGAGEWGLGCPMCGHLDRLEAWSDAARACILAEAERRRESIWRAFSEPPEPDARSLAVRLQTDDF*
Ga0066903_10707231113300005764Tropical Forest SoilTMAREICFCGWVGEVEDREPVYAGAGEWGLRCPMCGHLDRLEGWSEAARAWTLAEAARRRESTLELTSHRTHYNEPPQVAARSLLGSRLQRDDF*
Ga0068862_10111870323300005844Switchgrass RhizosphereMHARTPCTASREEGINVAREICFCGWVGELEDREPVYAGDGEWGLGCPNCGHLDRLEAWSEAARCCTLAEAAWRRGSTLELRANREQHVPSLPPSASAEG*
Ga0075417_1015233723300006049Populus RhizosphereVAREICFCGWVGELEDREPVYAGDGEWGLGCPNCGHLDRLEAWSEAARCCTLAEAAWRRESTLELRADREQHVPSLPPSASAEG*
Ga0075417_1034220413300006049Populus RhizosphereMHREINTAREICFCGWVGELEDREPVNAGDGEWGLDCPLCGHLDRLEAWSEAARSWTLAEAAWRRESTLELRSDRAQHEEPPQAAALPPSASAEG*
Ga0070715_1079480213300006163Corn, Switchgrass And Miscanthus RhizosphereMHREITMAREICFCGWVGELEDREPVYAGAGEWGLGCPMCGRLDRLEAWSEAARAWTLAEAARRRESTVESTSDRGHCDEPPQAAARSLPLRLLRDDF*
Ga0070712_10022090523300006175Corn, Switchgrass And Miscanthus RhizosphereMAREICFCGWVGELEAREPVYAGNGEWGLGCPLCGHLDRLEAWSEAARAWTLTEAARRRESTVESTSDRRHDQEAARSLPRPPAEG*
Ga0070765_10045680223300006176SoilMHREITMAREICFCGWVGELEDREPVYAGAGEWGLGCPMCGHLDRLEAWSEAARAWTLAEAARRRESTVESTSDRRHYDEPPRAAARSLPPGAFWGMISEGRSHVWSRRSVYW*
Ga0079221_1109886813300006804Agricultural SoilMHREITMARESCFCSWVGDLEDREPVYAGAGEWGLSCPMCGHLDRLEAWSEAARGWTLSEAARRRESTVESTSDRRLYSEPPQASVRSLPLSASAEG*
Ga0075428_10099767923300006844Populus RhizosphereVKREINVAREICFCGWVGELEDREPVYSGDGEWGLGCPNCGHLDRLEAWSEAARCCTLAEAAWRRESTLELRADREQHVPSLPPSASAEG*
Ga0075421_10032484243300006845Populus RhizosphereVAREICFCGWVGELEDREPVYAGDGEWGLGCPNCGHLDRLEAWSEAARCRALAEAAWRRESTLELRADREQHVPSLPPSASAEG*
Ga0075430_10116766323300006846Populus RhizosphereMHARTPCTASRGEINVAREICFCGWVGELEDREPVYSGDGEWGLGCPNCGHLDRLEAWSEAARCCTLAEAAWRRGSTLELRANREQHVPSLPPSASAEG*
Ga0075431_10013851713300006847Populus RhizosphereWVGELEDREPVYAGAGEWGLGCPRCGHLDRLEAWSDAGRSHTLAEAAWRRESTLELRADREQHVPSLPPSASAEG*
Ga0075431_10039073113300006847Populus RhizosphereVAREICFCGWVGELEDREPVYAGDGEWGLGCPNCGHLDRLEAWSEAARCCTLAEAAWRRGSTLELRADREQHVPSLPPSA
Ga0075433_1044188733300006852Populus RhizosphereMARESCFCGWAGELEDREPVYAGAGEWGLRCPMCGHLDRLEAWSEAARAWTLAEAARRRESKAESTSHRTHYNEPPQAAARSLPRSSLQRDDF*
Ga0075433_1046290223300006852Populus RhizosphereMTHSRAPCTELHVKRECVVREICFCGWVGELEDREPVYAGDGEWGLGCPMCGHLDRLEAWSEAARSCTLAEAAWRRESTLELRSDREQQKERSQAAAPSLPPSASAEG*
Ga0075433_1055901823300006852Populus RhizosphereVHDALSDALHGASVKREINVAREICFCGWVGELEDREPVYAGDGEWGLGCPMCGHLDRLEAWSDAARSCTLAEAAWRRESALELRSDREQRSPSLPPSASAEG*
Ga0075433_1097513613300006852Populus RhizosphereMHREITMAREICFCGWVGELEDREPIYAGAGEWGLGCPMCGRLDRLEAWSEAARAWTLAEAARRRESTVESTSDRKHYDEPPQAAAHSLVRSPAKG*
Ga0075425_10001713363300006854Populus RhizosphereMARESCFCSWVGDLEDREPVYAGAGEWGLSCPMCGHLDRLEAWSEAARGWTLSEAARRRESTVESTSDRRLYSEPPQASVRSLPLSASAEG*
Ga0075425_10015292023300006854Populus RhizosphereVHDALRTPCNELHVKREINVAREICFCGWVGELEDREPVYVGDGEWGLRCPMCGHLDRLEAWSEAARSCTWAEAAWRRESTLELRADREQQKERSQAAAPSLPPSASAEG*
Ga0075425_10067454413300006854Populus RhizosphereVAREICFCGWVGELEDREPVYAGDGEWGLGCPNCGHLDRLEAWSEAARCCALAEAAWRRESTLELRADREQHVPSLPPSASAEG*
Ga0075434_10009550453300006871Populus RhizosphereVKREINVAREICFCGWVGELEDREPVYAGDGEWGLGCPMCGHLDRLEAWSDAARSCTLAEAAWRRESALELRSDREQRSPSLPPSASAEG*
Ga0075434_10031437923300006871Populus RhizosphereMHREITMAREICFCGWVGELEDREPIYAGAGEWGLGCPMCGRLDRLEAWSEAARAWTLAEAARRRESTVESTSDRRHCDEPPQAAARSLPLRLLRDDF*
Ga0075429_10134054023300006880Populus RhizosphereHQAFGSASCTPGRPALLHVKREINVAREICFCGWVGELEDREPVYSGDGEWGLGCPNCGHLDRLEAWSEAARCCTLAEAAWRRGSTLELRADREQHVSSLPPSASAEG*
Ga0068865_10103875823300006881Miscanthus RhizosphereVRPDAFRTMHREIAMTREICFCGWVGELEAREPVYAGNGEWGLGCPMCGHLDRLEAWSEAARAWTLTEAARRRESTVESTSDRRHDQEAASSLPRPPAEG*
Ga0075426_1155733113300006903Populus RhizosphereMHREITMAREICFCGWVGELEDREPVYAGAGEWGLGCPMCGRLDRLEAWSEAARAWTLAEAARRRESTVESTSDRRHYAEPPQATARSLPPPPAAG*
Ga0075424_10013119443300006904Populus RhizosphereVKREINVAREICFCGWVGELEDREPVYVGDGEWGLRCPMCGHLDRLEAWSEAARSCTWAEAAWRRESTLELRADREQQKERSQAAAPSLPPSASAEG*
Ga0075424_10115248323300006904Populus RhizosphereMHREITMAREICFCGWVGELEDREPVYAGAGEWGLGCPMCGRLDRLEAWSEAARAWTLAEAARRRESTVESTSDRRHCDEPPQAAARSLPLRLLRDDF*
Ga0075424_10257858323300006904Populus RhizosphereMAREICFCGWVGEVEDREPVYAGAGEWGLRCPMCGHVDRLEDWSEAARAWTLAEAARRRERTVESSSLLTHCDDAPSAASRSISRSRLQRDDL*
Ga0079219_1045583223300006954Agricultural SoilMARESCFCGWVGELEDREPVYAGDGEWGLRCPMCGHLDRLEAWSEAARAWTLAEAARRRESKAESTSHRTHYNEPPQAAARSLPRSSLQRDDF*
Ga0075419_1011992323300006969Populus RhizosphereVAREICFCGWVGELEDREPVYAGDGEWGLGCPNCGHLDRLEAWSEAARCCTLAEAAWRRGSTLELRANREQHVPSLPPSASAKG*
Ga0075435_10010989933300007076Populus RhizosphereVHDALSDALHGASVKREINVAREICFCGWVGELEDREPVYAGDGEWGLGCPMCGHLDRLEAWSDAARSCTLAEAAWRRESTLESRSDREQRIPSLPPSASAEG*
Ga0075435_10099409313300007076Populus RhizosphereELEDREPVYAGDGEWGLGCPNCGHLDRLEAWSEAARCCALAEAAWRRESTLELRADREQHVPSLPPSASAEG*
Ga0099829_1139497613300009038Vadose Zone SoilMAREICFCGWVGELEDREPVYAGAGEWGLGCPMCGHLDRLEAWSEAVRSCILAEAARRRESMLESRSDGERPQAAAPPSAHSPLLRNDVHVWDNWNS*
Ga0111539_1013829963300009094Populus RhizosphereVAREICFCGWVGELEDREPVYSGDGEWGLGCPNCGHLDRLEAWSEAARCCTLAEAAWRRGSTLELRADREQHVPSLPPSASAEG*
Ga0075418_1085613923300009100Populus RhizosphereMHARTPCTASREEGINVAREICFCGWVGELEDREPVYAGDGEWGLGCPNCGHLDRLEAWSEAARCCTLAEAAWRRESTLELRADREQHVPSLPPSASAEG*
Ga0075418_1176835413300009100Populus RhizosphereELEDREPVYAGAGEWGLRCPMCGHLDRLEAWSEAARSCTWAEAAWRRESTLELRADREQQKERSQAAAPSLPPSASAEG*
Ga0099792_1100831913300009143Vadose Zone SoilMAREICFCGWVGELEDREPVYAGAGEWGLGCPMCGHLDRLEAWSEAARAWTLGEAARRRESTVESTSDRRHCDEPPQAAARSLPLRLLRDDF
Ga0114129_1065567933300009147Populus RhizosphereMARESCFCGWVGELEDRELVYAGAGEWGLGCPMCGHLDRLEAWSEAARAWILAEAARRRESIIDSTSYRTHYNAPPQACEGRSHVGSRPNVYQ*
Ga0114129_1135642313300009147Populus RhizosphereLHGASVKREINVAREICFCGWVGELEDREPVYAGDGEWGLGCPMCGHLDRLEAWSDAARSCTLAEAAWRRESALELRSDREQRSPSLPPSASAEG*
Ga0114129_1162159723300009147Populus RhizosphereMHARTPCTASREEGINVAREICFCGWVGELEDREPVYAGDGEWGLGCPNCGHLDRLKAWSEAARCCTLAEAAWRRGSTLELRADREQHVPSLPPSASAEG*
Ga0114129_1269803913300009147Populus RhizosphereELHVKREINVAREICFCGWVGELEDREPVYVGDGEWGLRCPMCGHLDRLEAWSEAARSCTWAEAAWRRESTLELRADREQQKERSQAAAPSLPPSASAEG*
Ga0111538_1049436913300009156Populus RhizosphereMHARTPCTASREEGINVAREICFCGWVGELEDREPVYAGDGEWGLGCPNCGHLDRLEAWSEAARCCTLAEAAWRRGSTLELRADRQQHVPSLPPSASAEG*
Ga0111538_1225564413300009156Populus RhizosphereLLRVKREINVAREICFCGWVGELEDREPVYSGDGEWGLGCPNCGHLDRLEAWSEAARCCTLAEAAWRRESTLELRADREQHVPSLPPSASAEG*
Ga0111538_1244674513300009156Populus RhizosphereMTHSRAPCTELHVKRECVVREICFCGWVGELEDREPVYAGDGEWGLGCPMCGHLDRLEAWSEAARSCTLAEAEWRRESTLELRSDREQQKERSQAAAPSLPPSASA
Ga0075423_1064089413300009162Populus RhizosphereMARESCFCGRIGELEDREPVYAGAGEWGLRCPMCGHIDRLEAWSEMARAWTLAEAARRRECTVESISHRTHYDRLLQAAARSLPRSPLKR
Ga0075423_1104014733300009162Populus RhizosphereCFCGWVGELEDREPVYAGDGEWGLGCPMCGHLDRLEAWSDAARSCTLAEAAWRRESALELRSDREQRSPSLPPSASAEG*
Ga0075423_1137526123300009162Populus RhizosphereMRARTPSIHHRAMHREITMARESCFCSWVGDLEDREPVYAGAGEWGLSCPMCGHLDRLEAWSEAARGWTLSEAARRRESTVESTSDRRLYSEPPQASVRSLPLSASAEG*
Ga0075423_1316547113300009162Populus RhizosphereQRVTDQASGRASCTPGRLRFIHRTMHRGTTMAREICFCGWVGEVEDREPVYAGAEEWGLRCPMCGHLDRLEGWSEAGRAWTLAEAARRRESTVELTSHRTHYNEPPEAAARSLLGSRLQRDDF*
Ga0105248_1124728823300009177Switchgrass RhizosphereVRPDALRTMHREIAMAREICFCGWVGELEAREPVYAGNGEWGLGCPMCGHLDRLAAWSEAARAWTLTEAARRRESTVESTSDRRHDQEAACSLPRPPAEG*
Ga0105249_1080353813300009553Switchgrass RhizosphereFCGWVGALEDRELVYTGDGEWGLGCPMCGHLDRLEAWSEAARCCTLAEAAWRRGSTVELRANREQHVPSLPPSASAKG*
Ga0126374_1027060223300009792Tropical Forest SoilMAREICFCGWAGEVEDREPVYAGAGEWGLRCPMCGHLDRLEGWSEAGRAWTLAEAARRRETRVELTSHRTHYNEPPQAAARSLFGSGLQRDDF*
Ga0126382_1097501413300010047Tropical Forest SoilMRMETIMTREACFCGWVGELEDREPVYAGDGEWGLRCPMCGHLDRLEAWSEAARAWTLAEAARRRESTVESSSQLTHCDDDPPAAARSISRSPLQGDDL*
Ga0126370_1151476723300010358Tropical Forest SoilEDREPVYAGAGEWGLRCPMCGHLDRLEGWSEAARAWTLAEAARRRESTVELISHRTHYNEPPQAAARSLLGSRLQRDDF*
Ga0126372_1000339693300010360Tropical Forest SoilMAREICFCGWAGEVEDREPVYAGAGEWGLRCPMCGHLDRLEGWSEAARAWTLAEAARRRESTVESTSHRTHYNEPPQAAARSLLGSRLQRDDF*
Ga0126383_1067046813300010398Tropical Forest SoilMAREICFCGWVGEVEDREPVYAGAGEWGLRCPMCGHLDRLEGWSEAGRAWTLAEAARRRESTVELTSHRTHYNEPPQAAARSLLGSRLQRDDF*
Ga0134127_1000369763300010399Terrestrial SoilMHARTPCTASREEGINVAREICFCGWVGELEDREPVYAGDGEWGLGCPNCGHLDRLEAWSEAARCCTLAEAAWRRGSTLELRPNREQHVPSLPPSASAKG*
Ga0134122_1285490723300010400Terrestrial SoilVAREICFCGWVGELEDREPVYAGDGEWGLGCPMCGHLDRLEAWSEAARAWTLAEAARRRESTVESTTSDRRHYDEPPRAAAR
Ga0134123_1000760863300010403Terrestrial SoilMHARTPCTASREEGINVAREICFCGWVGELEDREPVYAGDVEWGLGCPNCGHLDRLEAWSEAARCCTLAEAAWRRGSTLELRADREQHVPSLPPSASAEG*
Ga0137399_1105750523300012203Vadose Zone SoilMTHSRTPCTELHVKREINVAREICFCGWVGELEDREPVYAGDGEWRLGCPMCGHLDRLEAWSEAVRSCILAEAARRRESTLESRSDGERPQAAAPPSAHSPLLRNDVHVWDNWSS*
Ga0137395_1081752413300012917Vadose Zone SoilNGPGVRACMTHSRTPCTELHVKREINVAREICFCGWVGELEDREPVYAGDGEWGLGCPMCGHLDRLEAWSEAARSCTLAEAAWRRASTLELTSAREQHVPSLPPSASAEG*
Ga0137396_1005717153300012918Vadose Zone SoilVKREINVAREICFCGWVGELEDREPVYAGDGEWGLGCPMCGHLDRLEAWSEAVRSCILAEAARRRESTLESRSDGERPQAAAPPSAHSPLLRNDVHVWDNWSS*
Ga0126375_1191713013300012948Tropical Forest SoilMARESCFCGWVGELEDREPVYAGAGEWGLRCPMCGHLDRLEAWSEAVRAWILAEAARRRESTVESTSHRTRYKEPPQAAARFLPGSTLQTEDF*
Ga0157378_1234019613300013297Miscanthus RhizosphereMMVRPDAFRTMHREIAMTREICFCGWVGELEAREPVYAGNGEWGLGCPMCGHLDRLEAWSEAARAWTLTEAARRRESTVESTSDRRHDQEAACSLPRPPAEG*
Ga0163162_1244050913300013306Switchgrass RhizosphereICFCGWVGELEDREPVYAGDGEWGLGCPNCGHLDRLEAWSEADRYCTLAEAAWRPGSTLELRADREQHVPSLPPSASAEG*
Ga0066662_1207873123300018468Grasslands SoilMHRGTTMAREICFCGWVGEVEDREPVYAGAEEWGMRCPMCGHLDRLEGWSEAGRAWTLAEAARRRESTVELTSHRTHYNEPPEAAARSLLGSRLQRDDF
Ga0210407_1015493033300020579SoilMAREICFCGWVGELEDREPVYAGAGEWGLGCPMCGRLDRLEAWSEAARAWTLAEAARRRESTVESTLGRRHCDEPPQAAARSL
Ga0207685_1030415623300025905Corn, Switchgrass And Miscanthus RhizosphereMHREITMAREICFCGWVGELEDREPVYAGAGEWGLGCPMCGRLDRLEAWSEAARAWTLAEAARRRESTVESTSDRGHCDEPPQAAARSLPLRLLRDDF
Ga0207684_1006062563300025910Corn, Switchgrass And Miscanthus RhizosphereMAREICFCGWVGEVEDREPVYVGDGEWGLGCPMCGHLDRLEAWSEAARSWTLAEAAWRRESTFEMRSDRAQDEDRPQAAAAPPPWSASAEG
Ga0207684_1019976433300025910Corn, Switchgrass And Miscanthus RhizosphereMTHSRTPCIELHVKREINVAREICFCGWVGELEDREPVYAGDGEWGLGCPMCGHLDRLEAWSEAARSCTLAEAAWRRESTLESRSDREHHIPSLPPSASAEGWFHA
Ga0207684_1034111313300025910Corn, Switchgrass And Miscanthus RhizosphereMAREICFCGWVGEVEDREPVYAGAGEWGLRCPMCGHLDRLEGWSEAARAWTLAEAARRRESTVELTSHRTHYNEPPQAAARSLLG
Ga0207693_1002952023300025915Corn, Switchgrass And Miscanthus RhizosphereMAREICFCGWVGELEAREPVYAGNGEWGLGCPLCGHLDRLEAWSEAARAWTLTEAARRRESTVESTSDRRHDQEAARSLPRPPAEG
Ga0207693_1097963513300025915Corn, Switchgrass And Miscanthus RhizosphereMAREICFCGWVGELEDREPVYAGAGEWGLGCPMCGRLDRLEAWSEAARAWTLAEAARRRESAVESTSGRRHCDEPPQVAA
Ga0207646_1071516523300025922Corn, Switchgrass And Miscanthus RhizosphereMAREICFCGWVGEVEDREPVYAGAEEWGLRCPMCGHLDRLEGWSEAGRAWTLAEAARRRESTVELTSHRTHYNEPPEAAARSLLGSRLQRDDF
Ga0207641_1076158223300026088Switchgrass RhizosphereVRPDALRTMHREIAMAREICFCGWVGELEAREPVYAGNGEWGLGCPLCGHLDRLEAWSEAARAWTLTEAARRRESTVESTSDRRHDQEAARSLPRPPAEG
Ga0209055_100904383300026309SoilMAREICFCGWVGEVEDREPVYAGAEEWGMRCPMCGHLDRLEGWSEAGRAWTLAEAARRRESTVELTSHRTHYNEPPEAAARSLLGSRLQRDDF
Ga0209814_1019557233300027873Populus RhizosphereFRTMHREINTAREICFCGWVGELEDREPVNAGDGEWGLDCPLCGHLDRLEAWSEAARSWTLAEAAWRRESTLELRSDRAQHEEPPQAAALPPSASAEG
Ga0209481_1009406523300027880Populus RhizosphereVAREICFCGWVGELEDREPVYAGDGEWGLGCPNCGHLDRLEAWSEAARCCTLAEAAWRRGSTLELRADREQHVPSLPPSASAEG
Ga0209382_1220401623300027909Populus RhizosphereGVTDQAFGSASCTPGRPALLHVKREINVAREICFCGWVGELEDREPVYAGDGEWGLGCPNCGHLDRLEAWSEAARCRALAEAAWRRESTLELRADREQHVPSLPPSASAEG
Ga0209526_1003017233300028047Forest SoilMAREICFCGWVGELEDREPVYAGDGEWGLGCPMCGHLDRLEAWSEAARAWTLAEAARRRGSTVESRSDRRQYNEPPQAAARSLPPSASAEG
Ga0308309_1019788633300028906SoilMAREICFCGWVGELEDREPVYAGAGEWGLGCPMCGHLDRLEAWSEAARAWTLAEAARRRESTVESTSDRRHYDEPPRAAARSLPPGAFWGMISEGRSHVWSRRSVYW
Ga0307469_1002748873300031720Hardwood Forest SoilVRPDAFRTMHREITMAREICFCGSVGELEDREPVYAGDGEWGLGCPMCGHLDRLEAWSEAARAWTLAEAARRRGSTVESRSDRRQYNEPPQAAARSLPPSASAEG
Ga0307469_1006320753300031720Hardwood Forest SoilVAREICFCGWVRELEDREPVYAGDGEWGLGCPNCGHLDRLEVWSEAARCCTLAEAAWRRESTLASRADREQHVPSLPPSAAAER
Ga0307469_1021114023300031720Hardwood Forest SoilMTHSRTPCIELHVKREINVAREICFCGWVGELEDREPVYAGDGEWGLGCPMCGHLDRLEAWSDAARSCTLAEAAWRRESTLELRSDREQRIPSLPPSASAEG
Ga0307469_1133455223300031720Hardwood Forest SoilMAREICFCGWVGEVEDREPVYAGAGEWGLRCPMCGHLDRLEGWSEAARAWTLAEAARRRESTVELTSHRTHYNEPPEAAARSLLGSRLQRDDF
Ga0307469_1161088113300031720Hardwood Forest SoilMARESCFCGWVGDLEDREPVYAGAGEWGLSCPMCGHLDRLEAWSEAARGWTLAEAARRRETTVESTSDRRLYSELPHLSPSAEG
Ga0307468_10000572743300031740Hardwood Forest SoilVAREICFCGWVRELEDREPVYAGDGEWGLGCPNCGHLDRLEVWSEAARCCTLAEAAWRRESTLESRADREQHVPSLPPSASAER
Ga0307468_10033339723300031740Hardwood Forest SoilMIVRPDAFRTMHREITMAREICFCGSVGELEDREPVYAGDGEWGLGCPMCGHLDRLEAWSEAARAWTLAEAARRRGSTVESRSDRRQYNEPPQAAARSLPPSASAEG
Ga0307473_1063921823300031820Hardwood Forest SoilMHREITMAREICFCGWVGELEDREPVYAGAGEWGLGCPMCGRLDRLEAWSEAARAWTLAEAARRRESTVESTSDRRHCDEPPQAAARSLPLRLLRDDF
Ga0307470_1030488423300032174Hardwood Forest SoilMTHSRAPCTELHVKRECVVREICFCGWVGELEDREPVYAGDGEWGLGCPNCGHLDRLEVWSEAARCCTLAEAAWRRESTLESRADREQHVPSLPPSASAER
Ga0307470_1113541223300032174Hardwood Forest SoilMAREICFCGWVGELEAREPVYAGAGEWGLGCPMCGHLDRLEAWSEAARAWTLTEAARRRESTVESTSDRRHDQEAASSLPRPPAEG
Ga0307471_10009863653300032180Hardwood Forest SoilVAREICFCGWVRELEDREPVYAGDGEWGLGCPNCGHLDRLEVWSEAARCCTLAEAAWRRESTLESRADREQHVPSLPPS
Ga0307471_10027237343300032180Hardwood Forest SoilVKREINVAREICFCGWVGELEDREPVYAGDGEWGLGCPMCGHLDRLEAWSEAARSCVLAEAACRRESTLELRSGREQHISSRLPSASAEG
Ga0307471_10151927323300032180Hardwood Forest SoilMTHSRTPCIELHVKREINVAREICFCGWVGELEDREPVYAGDGEWGLGCPMCGHLDRLEAWSEAARSCTLAEAAWRRESTLELRSDREQHIPSLPPSASAGG
Ga0307471_10275113223300032180Hardwood Forest SoilMMCARTPSIHHRAVHREITMARESCFCGWVGDLEDREPVYAGAGEWGLSCPMCGHLDRLEAWSEPARGWTLAEAARRRESTVESTSFRRLYSEPPQAPVSSLPSPLLQRDDF
Ga0307472_10184456223300032205Hardwood Forest SoilMIMRPDAFRTMHREITMTREICFCGWVGELEAREPVYAGNGEWGLGCPMCGHLDRLEAWSEAARAWTLTEAARRRESTVESTSDRRHDQEAACSLPRPPAEG

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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