NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F072736

Metagenome / Metatranscriptome Family F072736

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F072736
Family Type Metagenome / Metatranscriptome
Number of Sequences 121
Average Sequence Length 64 residues
Representative Sequence MSADMQGRATEFKVKAGSRATLQLTVADSSGTAKDLSNATTYATGKWKVWKPDGTLVIDGTLT
Number of Associated Samples 83
Number of Associated Scaffolds 121

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 0.00 %
% of genes from short scaffolds (< 2000 bps) 0.00 %
Associated GOLD sequencing projects 78
AlphaFold2 3D model prediction Yes
3D model pTM-score0.29

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (100.000 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine
(28.099 % of family members)
Environment Ontology (ENVO) Unclassified
(86.777 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(70.248 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 0.00%    β-sheet: 16.48%    Coil/Unstructured: 83.52%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.29
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 121 Family Scaffolds
PF03237Terminase_6N 0.83



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

NameRankTaxonomyDistribution
UnclassifiedrootN/A100.00 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine28.10%
MarineEnvironmental → Aquatic → Marine → Oceanic → Aphotic Zone → Marine16.53%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine14.05%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine8.26%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Seawater5.79%
MarineEnvironmental → Aquatic → Marine → Oceanic → Photic Zone → Marine3.31%
SeawaterEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater3.31%
Deep OceanEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean2.48%
MarineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine2.48%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater2.48%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake1.65%
Background SeawaterEnvironmental → Aquatic → Marine → Oceanic → Aphotic Zone → Background Seawater1.65%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater1.65%
Marine SedimentEnvironmental → Aquatic → Marine → Hydrothermal Vents → Sediment → Marine Sediment1.65%
Marine PlanktonEnvironmental → Aquatic → Freshwater → Lotic → Unclassified → Marine Plankton0.83%
Marine OceanicEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine Oceanic0.83%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient0.83%
SeawaterEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Seawater0.83%
Hydrothermal Vent FluidsEnvironmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Hydrothermal Vent Fluids0.83%
Diffuse Hydrothermal Flow Volcanic VentEnvironmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Diffuse Hydrothermal Flow Volcanic Vent0.83%
Marine SedimentEnvironmental → Aquatic → Marine → Hydrothermal Vents → Sediment → Marine Sediment0.83%
Deep SubsurfaceEnvironmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface0.83%

Visualization
Powered by ApexCharts



Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000142Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - August 2009 P16 500mEnvironmentalOpen in IMG/M
3300000152Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - June 2008 P12 500mEnvironmentalOpen in IMG/M
3300000179Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - June 2009 P16 500mEnvironmentalOpen in IMG/M
3300000222Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - June 2009 P12 500mEnvironmentalOpen in IMG/M
3300000260Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - sample_A_09_P20_500EnvironmentalOpen in IMG/M
3300000264Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - sample_A_09_P04_500EnvironmentalOpen in IMG/M
3300001836Marine plankton microbial communities from the Amazon River plume, Atlantic Ocean - RCM27, ROCA_DNA191_0.2um_MCP-N_C_3aEnvironmentalOpen in IMG/M
3300002242Marine sediment microbial communities from Kolumbo Volcano mats, Greece - white/grey matEnvironmentalOpen in IMG/M
3300003540Diffuse hydrothermal flow volcanic vent microbial communities from Axial Seamount, northeast Pacific ocean - Sample FS896_ElGuapo_DNAEnvironmentalOpen in IMG/M
3300005431Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV75EnvironmentalOpen in IMG/M
3300005969Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S7_td_Bottom_ad_4513_LV_AEnvironmentalOpen in IMG/M
3300006166Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV91EnvironmentalOpen in IMG/M
3300006310Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_3_0500mEnvironmentalOpen in IMG/M
3300006315Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT233_1_0770mEnvironmentalOpen in IMG/M
3300006324Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT231_1_0500mEnvironmentalOpen in IMG/M
3300006325Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_1_0500mEnvironmentalOpen in IMG/M
3300006336Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_2_0500mEnvironmentalOpen in IMG/M
3300006339Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT232_3_0500mEnvironmentalOpen in IMG/M
3300006340Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_2_0770mEnvironmentalOpen in IMG/M
3300006344Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT224_1_0500mEnvironmentalOpen in IMG/M
3300006754Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaGEnvironmentalOpen in IMG/M
3300006789Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaGEnvironmentalOpen in IMG/M
3300006900Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_Bottom_ad_5009_LV_AEnvironmentalOpen in IMG/M
3300006902Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_250_ad_251m_LV_AEnvironmentalOpen in IMG/M
3300006923Marine viral communities from the Subarctic Pacific Ocean - 15B_ETSP_OMZ_AT15312_CsCl metaGEnvironmentalOpen in IMG/M
3300006924Marine viral communities from the Subarctic Pacific Ocean - 14B_ETSP_OMZ_AT15311_CsCl metaGEnvironmentalOpen in IMG/M
3300007291Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S7_td_AAIW_ad_750m_LV_AEnvironmentalOpen in IMG/M
3300007510Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 267m, 250-2.7um, replicate aEnvironmentalOpen in IMG/M
3300007758Diffuse hydrothermal flow volcanic vent microbial communities from Axial Seamount, northeast Pacific ocean - Sample CTDPlume_2015_DNA CLC_assemblyEnvironmentalOpen in IMG/M
3300007963Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (version 2)EnvironmentalOpen in IMG/M
3300008050Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaGEnvironmentalOpen in IMG/M
3300008051Marine viral communities from Cariaco Basin, Caribbean Sea - 23_WHOI_OMZEnvironmentalOpen in IMG/M
3300008216Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_GeostarEnvironmentalOpen in IMG/M
3300008219Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_b05EnvironmentalOpen in IMG/M
3300009104Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 143m, 2.7-0.2umEnvironmentalOpen in IMG/M
3300009605Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_M9EnvironmentalOpen in IMG/M
3300009622Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3321_4155EnvironmentalOpen in IMG/M
3300010153Marine viral communities from the Subarctic Pacific Ocean - 20_ETSP_OMZ_AT15318 metaGEnvironmentalOpen in IMG/M
3300010297Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_20_0.8_DNAEnvironmentalOpen in IMG/M
3300011013Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 4SBTROV10_white metaGEnvironmentalOpen in IMG/M
3300013098Subseafloor sediment microbial communities from Guaymas Basin, Gulf of California, Mexico - Guay11, Core 4567-28, 0-3 cmEnvironmentalOpen in IMG/M
3300013114Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, May cruise - 198m, 250-2.7um, replicate aEnvironmentalOpen in IMG/M
3300017704Marine viral communities from the Subarctic Pacific Ocean - Lowphox_07 viral metaGEnvironmentalOpen in IMG/M
3300017757Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 43 SPOT_SRF_2013-05-22EnvironmentalOpen in IMG/M
3300017775Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 55 SPOT_SRF_2014-07-17EnvironmentalOpen in IMG/M
3300020084Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015032 Kigoma Deep Cast 1200mEnvironmentalOpen in IMG/M
3300020197Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015037 Kigoma Deep Cast 65mEnvironmentalOpen in IMG/M
3300020285Marine microbial communities from Tara Oceans - TARA_B000000460 (ERX555972-ERR599034)EnvironmentalOpen in IMG/M
3300020398Marine microbial communities from Tara Oceans - TARA_B100000949 (ERX555993-ERR599072)EnvironmentalOpen in IMG/M
3300020427Marine microbial communities from Tara Oceans - TARA_B000000460 (ERX555922-ERR598960)EnvironmentalOpen in IMG/M
3300020443Marine microbial communities from Tara Oceans - TARA_B100001179 (ERX556000-ERR598944)EnvironmentalOpen in IMG/M
3300020444Marine microbial communities from Tara Oceans - TARA_B100001245 (ERX556114-ERR598980)EnvironmentalOpen in IMG/M
3300020458Marine microbial communities from Tara Oceans - TARA_B100000749 (ERX556123-ERR599000)EnvironmentalOpen in IMG/M
3300020476Marine microbial communities from Tara Oceans - TARA_B100001750 (ERX556108-ERR598958)EnvironmentalOpen in IMG/M
3300020478Marine microbial communities from Tara Oceans - TARA_B100000029 (ERX556025-ERR599111)EnvironmentalOpen in IMG/M
3300021791Hydrothermal fluids microbial communities from Mariana Back-Arc Basin vent fields, Pacific Ocean - Daikoku_FS921 150_kmerEnvironmentalOpen in IMG/M
3300024052 (restricted)Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_5EnvironmentalOpen in IMG/M
3300024255 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_123_September2016_10_MGEnvironmentalOpen in IMG/M
3300025084Marine viral communities from the Subarctic Pacific Ocean - 14B_ETSP_OMZ_AT15311_CsCl metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025103Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025108Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025112Marine viral communities from the Pacific Ocean - ETNP_2_130 (SPAdes)EnvironmentalOpen in IMG/M
3300025125Marine viral communities from the Pacific Ocean - ETNP_2_1000 (SPAdes)EnvironmentalOpen in IMG/M
3300025128Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025141Marine viral communities from the Pacific Ocean - ETNP_6_85 (SPAdes)EnvironmentalOpen in IMG/M
3300025873Marine viral communities from the Pacific Ocean - ETNP_6_1000 (SPAdes)EnvironmentalOpen in IMG/M
3300026079Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S7_td_Bottom_ad_4513_LV_A (SPAdes)EnvironmentalOpen in IMG/M
3300027844Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_134 (SPAdes)EnvironmentalOpen in IMG/M
3300028022Seawater viral communities from deep brine pools at the bottom of the Mediterranean Sea - LS1 750mEnvironmentalOpen in IMG/M
3300028487Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2011_P26_2000mEnvironmentalOpen in IMG/M
3300028488Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2015_P26_1320mEnvironmentalOpen in IMG/M
3300031800Marine microbial communities from Western Arctic Ocean, Canada - CB6_Bottom_1051EnvironmentalOpen in IMG/M
3300031801Marine microbial communities from Western Arctic Ocean, Canada - CB27_Tmax_986EnvironmentalOpen in IMG/M
3300031802Marine microbial communities from Western Arctic Ocean, Canada - CB6_AW_1057EnvironmentalOpen in IMG/M
3300031803Marine microbial communities from Western Arctic Ocean, Canada - CB27_AW_983EnvironmentalOpen in IMG/M
3300031804Marine microbial communities from Western Arctic Ocean, Canada - CB11b_AW_Bot5EnvironmentalOpen in IMG/M
3300031811Marine microbial communities from Western Arctic Ocean, Canada - CB11b_Tmax_Bot8EnvironmentalOpen in IMG/M
3300031886Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 200m 3416EnvironmentalOpen in IMG/M
3300032032Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 100m 32315EnvironmentalOpen in IMG/M
3300032130Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 200m 34915EnvironmentalOpen in IMG/M
3300032278Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-500_MGEnvironmentalOpen in IMG/M
3300032360Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 34915EnvironmentalOpen in IMG/M
3300032820Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - S1503-DNA-20-500_MGEnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
LPaug09P16500mDRAFT_100979913300000142MarineMAGSIDMEGRAIEFKVKAGSRMTLQLTVADSSGTAKSLANTVTYATGKWKVWKPGGTLIVNGDLTFTNRAGGIVSYALLTADTVIANAGRWEGE
LPjun08P12500mDRAFT_102076823300000152MarineMSQNLTPRDVEYRVKSGSRATLELVVNDSSGTAKNLSNTVTYSTGVWKVWKPDGTLIINGAVTYSDRTN
LPjun09P16500mDRAFT_101063023300000179MarineMAGSIDMEGRAIEFKVKAGSRMTLQLTVADSSGTAKSLANTVTYATGKWKVWKPGGTLIVNGDLTFTNRAGGIVSYALLEADTVIAN
LPjun09P16500mDRAFT_103710313300000179MarineMGASADMTGRTTEFRVKAGSRATLQLTVADSTGSGKDLTNTVTYATGKWKVWQPNGTLII
LPjun09P12500mDRAFT_104145823300000222MarineMSMNMIGRATEYRVKAGSRATLQLTITDSTGTAKNLSDTGTYTSGLWKVWKPSGTLIINGAIAF
LPjun09P12500mDRAFT_104961223300000222MarineMAGSIDMEGRAIEFKVKAGSRMTLQLTVADSSGTAKSLANTVTYATGKWKVWKPGGTLIVNGDLTFTNRAGGIVSYALLE
LP_A_09_P20_500DRAFT_102278123300000260MarineMAGSIDMEGRAIEFKVKAGSRMTLQLTVADSSGTAKSLANTVTYATGKWKVWKPGGTLIVNGDLTFTNRAGGIVSYALL
LP_A_09_P20_500DRAFT_102536423300000260MarineMSSADMMGRTTEFRVKAGSRATLQLTVADSSGTAKDLSNATTYATGKWKVWK
LP_A_09_P04_500DRAFT_104579613300000264MarineMSQNLTPRDVEYRVKSGSRATLELTVNDSSGTAKNLSNTVTYSTGVWKVWKPD
RCM27_100757033300001836Marine PlanktonMSMNLVGRSVEFRTKVGSRSTFELTIKNNDGTVKDLSNTTQYATGKWKVWKTDGTLII
KVWGV2_1072345413300002242Marine SedimentMRGRGVSFTVKAGSRATLQITIKDSSGTAKNLSNNVTYASGKWKVWKPD
KVWGV2_1096958723300002242Marine SedimentMSIDMTPRAIEYKVKAGSRATLELTISDSTGSAKNLSNTTTYATGKWKVWKTDGT
FS896DNA_1068478313300003540Diffuse Hydrothermal Flow Volcanic VentMAGSIDMEGRAIEFKVKAGSRMTVELTVADSSGVAKSLANTVTYNTGRWKVWKPGGTLIINGSLTFTNRAVE*
Ga0066854_1031607523300005431MarineMAGSIDMEGRAIEFKVKAGSRITVQLTVADSSGVAKSLANTVTYNTGKWKVWKPGGTLII
Ga0066369_1029034423300005969MarineMAGSIDMEGRAIEFKVKAGSRMTLELTVADSSGTAKSLVNTVTYNTGRWKVWKPGGTLIINGSLTFTNRAGGVV
Ga0066836_1026138013300006166MarineMSIDMTPRAIEYKVKAGSRATLELTISDSTGTAKNLSNTTTYATGKWKVWKTDGTLLIN
Ga0068471_130933913300006310MarineMEGRAIEFKVKAGSRMTVQLTVADSSGVAKSLANTVTYNTGKWKVWKPGGTLIINGDLVFTNRAGGVVSYALLEADTVIANAGRWEG
Ga0068471_134133823300006310MarineMSADMEGRATEFKVKAGSRATLQLTVADSSGNAKDLSNTTTYATGKWKVWKPGGVLIINGDLVFTT
Ga0068471_154858123300006310MarineMVGRTTQFRVKAGSRATLQLTVADSTGTGKDLSNATTYASGKWK
Ga0068487_108837913300006315MarineMSMNMVGRSTEFRVKAGSLITLQLTITDDGGTAKNLSNTVTYATGKWKVWKPDGTLIINGNIVYTTRSSGLI
Ga0068476_110021713300006324MarineMSMVRGRAIEYRIKAGSRATLELTINDATGSAKSLTDTNTYTTGVWKVWKPDGTLI
Ga0068476_111068923300006324MarineMSMNMIGRATEYRVKAGSRATLSLTITDSTGVAKSLTDTNTYATGVWK
Ga0068501_117293323300006325MarineMSTNMIGRATEYRVKAGSRATLSLTITDSTGVANSLTDTTTYATGVWKVWKP
Ga0068502_102472913300006336MarineMSQNLYPRATEYRVKSGSRATLELTIQDSAGTAKSLSNTVTYSTGVWKVWKPAGTLIINGAITY
Ga0068502_104186323300006336MarineMSQNLTPRDVEYRIKSGSRATLELTVQDSSGTAKNLSNTVTYATGVWKVWKPDGTLII
Ga0068502_142846343300006336MarineMSQNLTPRDVEYRVKSGSRATLELTVNDSSGTAKNLSNTVTYSTGVWKVWKPDGTLIINGAITYSDRTNGK
Ga0068481_108711913300006339MarineMGASADMTGRTTEFRVKAGSRATLQLTVADSTGSGKDLTNTVTYATGKWKVWEPNGTLIINGDIVYTTRASGLV
Ga0068481_128064423300006339MarineMVGSIDMIGRDVEFRVKTGSRATLQLTVADSSGNAKDLSNSTTYATGLWKVWKPDGTLIINGALTFTTRASG
Ga0068481_146886613300006339MarineMAGSIDMEGRAIEFKVKAGSRMTVQLTVADSSGVAKSLANTVTYNTGKWKVWKPGGT
Ga0068503_1103820523300006340MarineMEGRAIEFKVKAGSRMTLQLTVADSSGVAKSLANTVTYATGKWKVWKPGGTLIINGSLTFSNRAGGEVSYALLEADTVIANAGR
Ga0099695_101866813300006344MarineMGASADMTGRTTEFRVKAGSRATLQLTVADSTGSGKDLTNTVTYATGKWKVWQPNGTLIINGDLVYTTRASGLVSYPLT
Ga0098044_140768423300006754MarineMSQNLTPRDVEYRIKSGSRATLELTVQDSNGTAKNLSNTVTYATGVWKVWKP
Ga0098054_125595723300006789MarineMSMNMTGRGTSFIVKAGSRATLQITIKDSSGTAKNLSNTVTYNSGKWKVWKPD
Ga0066376_1021339523300006900MarineMSQNLTPRDVEYRVKSGSRATLELTVQDSSGTAKNLSNTVTYATGVWKVWKP
Ga0066372_1033811723300006902MarineMSSADMTGRTTEFRIKAGSRATLQLTVADSAGTGKDLTNTVTYATGKWKVWKPDGTLLIN
Ga0066372_1051218123300006902MarineMSADMQGRATEFKVKAGSRATLQLTVADSSGSAKDLSNATTYATGKWKVWKPGGTLIINGTLTFTTRA
Ga0066372_1070379023300006902MarineMVGSIDMVGRDVEFRVKTGSRATLQLTVADSSGNAKDLSNSTTFATGVWKVWKPDGTLII
Ga0066372_1079135423300006902MarineMSTNMIGRATEYRVKAGSRATLELTINDSTGSAKSLTDNLTYNTGVWKVWKPD
Ga0098053_113160913300006923MarineMVGRSTEFRVKAGSLITLQLTITDDGGTAKNLSNTVTYNSGKWKVWKP
Ga0098051_110684513300006924MarineMSSMNMIGRATEFRVKSGSRPTLQLTITDDAGAAKNLSNTVTYNSGKWKVWKPDGTL
Ga0066367_139921423300007291MarineMGASADMTGRTTEFRVKAGSRATLQLTVADSSGTGKDLSNTTTYSTGKWKVWKPDGTLIIDGNISYTTRSTGIVQYTLSATDTAIANAGIWAGE
Ga0105013_145145823300007510MarineMSQNMIGRAIEYRVKAGSRATIYINILDADGNAKALTDTSLYGSATWKVWKPDGTLIINGACTFSDRSS
Ga0105668_108158823300007758Background SeawaterMSQNLTPRDVEYRVKSGSRATLELTVQDSSGTAKNLSNTVTYSTGVWKVWKPDGTLIINGSVTYSDR
Ga0105668_119339713300007758Background SeawaterMAGSIDMEGRAIEFKVKAGSRMTLQLTVADSSGVAKSLANTVTYNTGKWKVWKPG
Ga0110931_113256513300007963MarineMSIDMTPRAIEYKVKAGSRATLQLTISDSTGSAKNLSNSTTYATGKWKVWKTDGTLLINGDLIFDNRSN
Ga0110931_126490223300007963MarineMTPRADEYRVKAGSRATLSLTITDSSNSAKSLSNTTTYASGKWKVWKPNGT
Ga0098052_101990813300008050MarineMSMNMVGRSTEFRVKAGSLITLQLTITDDGGTAKNLTNTVTYSTGKWK
Ga0098062_106017413300008051MarineMSSADMVGRTTEFRVKAGSRATLQLTVADSTGTGKDLSNTTTYASGKWKVWKPDGTLIIDGVISFTTRSTGIIQYTLSATDTAIANAGIWAGE
Ga0114898_117299523300008216Deep OceanMSSADMVGRNIQFRVKAGSRTTLQLTVADSSGVGKDLSNTTTYATGKWKVWKPGGTLVIDGNLVFTTRASGIVSYTLSATDT
Ga0114905_125634113300008219Deep OceanMSTNMIGRATEYRVKAGSRATLQLTISDSTGSAKSLTDAVTYSTGVWKVWKPDGTLIIN
Ga0117902_109128813300009104MarineMSMNMRGRSVSFVVKAGSRATLQVTVKDSSGVAKNLSNTVTYNSGKWKVWKPDG
Ga0114906_124762513300009605Deep OceanMVGRATEFRVKVGSRPTLQLTITNDAGTAKDLSNTVTYATGKWKVWKPDGTL
Ga0105173_104094923300009622Marine OceanicMAGSIDMEGRAIEFKIKAGSRATVQLTVADSSGNAKSLANTTTYATGRWKVWKPGGTLIINGSLTFTTRASGLVS
Ga0098059_106185513300010153MarineMSMNMVGRSTEFRVKAGSLITLQLTITDDGGTARNLSNTVTYNSGKWK
Ga0098059_111233133300010153MarineMSMNMVGRSTEFRVKAGSRTTLQLTITDDGGSARNLTNTVTYNGGKWTVW*
Ga0129345_113602323300010297Freshwater To Marine Saline GradientMSMNMTGRSTSFVVKAGSRATLQLTIKDSDGTVKDLSNDTTYATGKWKVWKPD
Ga0114934_1044616413300011013Deep SubsurfaceMSMNMVGRSTEFRVKAGSLISLQLTITDDGGTAKNLSDTVNYNTGKWKV
Ga0164320_1068525413300013098Marine SedimentMVGRSTEFRVKSGSTPTLQITIKDDAGNAKDLSNTVTYASGKWKVWKPDGTLLINGTIAF
Ga0171650_114041223300013114MarineVIKMGASADMTGRTTEFRVKAGSRATLQLTVADSSGTGKDLSNTTTYSTGKWKVWKPDGTLIIDGNISYTTRSTGIVQYTLSATDTAIANAGIWAGEV
Ga0181371_106808713300017704MarineMSMNMVGRATEFRVKAGSTATLQITVTDNSGTAKNLSNTVTYNSGKWKVWKPDGTLLING
Ga0181420_118770113300017757SeawaterMSMNMVGRSTEFRVKAGSLITLQLTITDDGGTAKNLTNTVTYNSGKWKVWKPDGTLLI
Ga0181432_111980413300017775SeawaterMYQRQSKLIRQIRQQGVIRMGASADMTGRTTEFRVKAGSRATLQLTVADSSGTGKDLSNTTTYSTGKWKVWKPDGTLIIDGNISYTTRSTGIVQYTLSATDTAIANAGIWAG
Ga0181432_126468213300017775SeawaterMSNMIGRATEYRVKAGSRATLQLTITDSSGTAKSLNDTGTYASGSWKVWK
Ga0194110_1084441713300020084Freshwater LakeMSMNMTGRAVEFRVKAGARSTIELEIQNDDGTAKNLTNTTNFATGKWKVWKPDGTL
Ga0194128_1003920023300020197Freshwater LakeMSMNLTGRAVEFRVKAGARSTIELEIQNDDGTAKNLTNTTNFATGKWKVWKPDG
Ga0211602_103519123300020285MarineMGSIDMEGRAIEFKVKAGSRITLQLTVADSSGNAKSLANTVTYATGKWKVWKPGGTLIVNGDLTFTNRAGGIVSYALLEADT
Ga0211637_1000170213300020398MarineMSQNLTPRDVEYRVKSGSRATLELTVQDSSGTAKNLSNTVTYSTGVWKVWKP
Ga0211637_1021752013300020398MarineMSSADMVGRTTQFRVKAGSRATLQLTVADSSGVGKDLSNTTTYASGKWKVWKPSGTLIIDGTISFTTRSSGIVQYTLSATDTAIA
Ga0211603_1017160313300020427MarineMSADMEGRATEFKVKAGSRATLQLTVADSSGNAKDLSNTTTYATGKWKVWKPGGVLIINGDLVFTTRASGLVSYVLSATDTAIANAGRW
Ga0211544_1044431223300020443MarineMSTNMIGRATEYRVKAGSRATLSLTITDSAGTAKSLTDTVTYASGSWKVWKPDGTLII
Ga0211578_1033032113300020444MarineMSQNLYPRATEYRVKSGSRATLELTIQDSAGTAKSLSNTVTYSTGVWKVWKPAGTLIINGAITYSDRANG
Ga0211578_1036949223300020444MarineMAGSIDMEGRAIEFKVKVGSRATVQLTVADSSGTAKDLSNTVTYATGLWKVWKPGG
Ga0211697_1025730723300020458MarineMEGRAIEFKVKAGSRMTVQLTVADSSGVAKSLANTVTYNTGKWKVWKPGGTLIINGDLVFTNRA
Ga0211715_1025439423300020476MarineMSSMNMVGRATEFRVKSGSRPTLQLTITDDAGAAKNLSNTVTYNSGKWKVWKPD
Ga0211503_1021443413300020478MarineMSMNMVGRSTEFRVKAGSRTTLQLTITDDGGSARNLTNTVTYNGGKWKV
Ga0226832_1007703523300021791Hydrothermal Vent FluidsMSSADMTGRTTEFRIKAGSRATLQLTVADSSGTGKDLSNTTTYATGKWKVWQPNGTLIINGDIVFTTRASGLVSYVLTASDTAIANAGIWAGEV
(restricted) Ga0255050_1005708123300024052SeawaterMSMNMEGRSTEFRVKVGATATLQLTIGLDLSNTVTFATGKWKVWKPDGTLVINGNIVNTTVLD
(restricted) Ga0233438_1031151713300024255SeawaterMSMNLTGRATEYRVKAGSVAYLTLTVTDSSGTAKSLTDNVTYATGKWKVWQPDGTLLING
Ga0208298_105017813300025084MarineMSMNLTGRNVEFRVKVGSTATLILTITDDIGAVKDLSNTTTFATGKWKV
Ga0208013_114860623300025103MarineMSIDMTPRAIEYKVKAGSRATLQLTISDSSGSAKSLSNTTTYATGKWKVWKPDGTLQIDGAVTFSDRANGVVSYALSATDATNAKAGRWEG
Ga0208013_117403423300025103MarineMSFVRGRAIEYRVKAGSRATLELTINDATGAAKSLTDGVTYATGKWKVWKPDGTLIIDGALT
Ga0208793_105760313300025108MarineMSMNMVGRSTEFRVKAGSLITLQLTITDDGGTARNLSNTVTYNSGKWKVWKPDGTLLINGNIVY
Ga0209349_109492213300025112MarineMSSADMTGRNTEFRVKAGSRATLQLTVADSTGSGKDLSNTTTYATGKWKVWKP
Ga0209644_103520513300025125MarineMEGRAIEFKVKAGSRMTLQLTVADSSGVAKSLANTVTYATGKWKVWKPGGTLIVNGDLTF
Ga0209644_109751723300025125MarineVETHLKKSKLIRQTRQVEVISMSSADMMGRTTEFRVKAGSRATLQLTVADSSGVGKDLSNTTTYSTGKWKVWKPGGTLVIDGNIVFVTRASGIVSYSLTAADTLVA
Ga0208919_108116323300025128MarineMSMNMVGRSTEFRVKAGSRTTLQLTITDDGGSARNLTNTVTYNGGKWKVWKPDGTLII
Ga0209756_134510623300025141MarineMSSMNMIGRATEFRVKSGSRPTLQLTITDDAGAAKNLSNTVTYNSGKWKV
Ga0209757_1013771023300025873MarineMSTNMIGRATEYRVKAGSRATLSLTITDSAGVAKSLTDTVTYASGNWKV
Ga0209757_1017272223300025873MarineMGASADMTGRTTEFRVKAGSRSTLQLTVADSTGTGKDLSNTTTYSTGKWKVWKPDGTLIIDGNISF
Ga0209757_1026246623300025873MarineMSMNLTGRNIEFRVKVGSTATLALTITDDVGVVKDLSNTVTYATGNWKVWQPNGTLLINS
Ga0208748_104764223300026079MarineMSQNLTPRDVEYRVKSGSRATLELTVQDSSGTAKNLSNTVTYATGVWKVWKPDGTLIINGAITY
Ga0209501_1056134323300027844MarineMSMNMVGRSTEFRVKVGSRPTLQLTITDDAGTAKNLSNTVTYATGKWKVWKPDGTL
Ga0256382_111745213300028022SeawaterMVGSIDMVGRDVEFRVKTGSRATLQLTVADSSGNAKDLSNSTTYATGIWKVWKPDGT
Ga0257109_111299013300028487MarineMEGRAIEFKVKAGSRMTLQLTVADSSGVAKSLANTVTYATGRWKVWKPGGTLIINGSLTFTNR
Ga0257109_120511513300028487MarineMGASADMTGRNTEFRIKAGSRATLQLTVADSSGTGKDLSNATTYATGKWKVWKPGGTLIIDGTISFTTRASGIIQYTLSATDTAIANAGIWAGEV
Ga0257113_119105413300028488MarineMGASADMTGRTTEFRVKVGSRAILQLTVADSSGTGKDLSNTTTYSTGKWKVWKPDGTLIIDGNISFTTRATGIVQYTLSATDTVAANAGIWA
Ga0257113_122008523300028488MarineMSSADMVGRTTQFRVKAGSRATLQLTVADSTGSGKNLANTTTYATGKWKVWKPGGTLIINGDIVYTTRASGLVSYVLTATDTAIANAGIWAG
Ga0257113_123291013300028488MarineMSSADMVGRTIEYRIKAGSRATLQLTVADSSGTGKDLSNTTTYATGKWKVWKPGGTLL
Ga0257113_124997223300028488MarineMSQNLTPRDVEYRVKSGSRATLELVVQDSSGTAKNLSNTVTYSTGVWKVWKPDGTLIINGAVTYSDRTNGKITYALS
Ga0310122_1024899313300031800MarineMSQNLTPRDVEYRVKSGSRATLELVVQDSNGTAKNLSNTVTYSTGVWKVWKPNGTLIINGAITYSDRTN
Ga0310122_1026649623300031800MarineMAGSIDMEGRAIEFKVKAGSRMTVELTVADSSGVAKSLANTVTYNTGRWKVWKPGGT
Ga0310122_1026818213300031800MarineMSQNLYPRATEYRVKSGSRATLEATIQDSAGTAKSLANTVTYATGRWKVWKPDGTLVIDG
Ga0310122_1043113013300031800MarineMVGSIDMEGRAIEFKVKAGSRLTVELTVADSSGNAKSLANTVTYNTGRWKVWKPGGTLIINGSLTFTNRAGGVVS
Ga0310121_1009229813300031801MarineMEGRAIEFKVKAGSRMTVQLTVADSSGVAKSLANTVTYNTGKWKVWKPGGTLIINGDLVFTN
Ga0310121_1028731813300031801MarineMGASADMTGRTTEFRVKAGSRATLQLTVADSSGTGKDLSNTTTYATGKW
Ga0310121_1037501713300031801MarineMAGSIDMEGRAIEFKVKAGSRITVELTVADSSGVAKSLANTTTYATGKWKVWKPGGTLIINGDLTFT
Ga0310123_1013965513300031802MarineMAGSIDMEGRAIEFKVKVGSRATVQLTVADSSGTAKDLSNSVTYATGLWKVWKPGGTLLINGAITYTT
Ga0310120_1008846423300031803MarineMAGSIDMEGRAIEFKVKVGSRATVQLTVADSSGTAKDLSNSVTYATGLWKVWKPGGTLLINGAI
Ga0310124_1012868413300031804MarineMAGSIDMEGRAIEFKVKAGSRMTVELTVADSSGVAKSLANTITYATGKWKVWKPGGTLIVNGDLTFTNRAGGVVSYSLLE
Ga0310125_1013713223300031811MarineMSQNLTPRDVEYRVKSGSRATLELVVQDSSGTAKNLSNTVTYSTGVWKVWKPDGTLVINGAVTY
Ga0315318_1015551113300031886SeawaterMSQNLTPRDVEYRIKSGSRATLELTVQDSSGTAKNLSNTVTYATGVWKVWKPDGTLIINGAI
Ga0315327_1091788613300032032SeawaterMSMNMVGRSTEFRVKAGSRTTLQLTITDDGGTARNLSNTVTYNSGKWKVWKPDGTLLINGNIVYTTRS
Ga0315333_1048115313300032130SeawaterMSMNLTGRNIEFRVKVGSTATLALTITDDVGVVKDLSNTVTYATGNWK
Ga0310345_1061798713300032278SeawaterMGASADMTGRTTEFRVKAGSRATLQLTVADSTGSGKDLTNTVTYATGKW
Ga0310345_1159147613300032278SeawaterMVGRTTEFRIKAGSRATLQLTVADSAGTGKDLTNTVTYATGKWKVWKPDGT
Ga0310345_1228977623300032278SeawaterMSTNMIGRATEYRVKAGSRATLSLTITDSSGTAKSLTDTVTYASGSWKVW
Ga0315334_1052289123300032360SeawaterMGASADMTGRTTEFRVKAGSRATLQLTVADSTGSGKDLTNTVTYATGKWKVWQPNGTLIINGDLVY
Ga0310342_10250359313300032820SeawaterMSSADMVGRNIQFRVKAGSRTTLQLTVADSSGVGKDLSNTTTYATGKWKVWKPGGTLV
Ga0310342_10289745323300032820SeawaterMGSIDMEGRAIEFKVKAGSRITLQLTVADSSGNAKSLANTVTYNTGKWKVWKPGGTLIVNGDLTFTNRAGGVVSYALLESDTVIANAGR
Ga0310342_10335607713300032820SeawaterMSADMQGRATEFKVKAGSRATLQLTVADSSGTAKDLSNATTYATGKWKVWKPDGTLVIDGTLT
Ga0310342_10348515623300032820SeawaterMSSADMVGRTTEFRVKAGSRATLQLTVADSTGTGKDLSNTTTYASGKWKVWKPGGTLIIDGVISFTTRSSGIIQYT


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.