Metagenome / Metatranscriptome Family F072726

Basic Information
Family ID	F072726
Family Type	Metagenome / Metatranscriptome
Number of Sequences	121
Average Sequence Length	81 residues
Representative Sequence	MLFSNLLVAIALTVLFPLGLMGMLAAGEWLERRTLAAEEVVPRRLRRMDSKPPEAVEAMVLEETAHVVAQYWSATGRPA
Number of Associated Samples	91
Number of Associated Scaffolds	121

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	6.61 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	86.78 %
Associated GOLD sequencing projects	88
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Bacteria (52.893 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (20.661 % of family members)
Environment Ontology (ENVO)	Unclassified (24.793 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (36.364 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 84.81% β-sheet: 0.00% Coil/Unstructured: 15.19%
Feature Viewer

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Pfam ID	Name	% Frequency in 121 Family Scaffolds
PF07722	Peptidase_C26	80.17
PF03631	Virul_fac_BrkB	6.61
PF02518	HATPase_c	4.13
PF07332	Phage_holin_3_6	0.83

COG ID	Name	Functional Category	% Frequency in 121 Family Scaffolds
COG1295	Uncharacterized membrane protein, BrkB/YihY/UPF0761 family (not an RNase)	Function unknown [S]	6.61

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	52.89 %
Unclassified	root	N/A	47.11 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	52.89 %
Unclassified	root	N/A	47.11 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	52.89 %
Unclassified	root	N/A	47.11 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.11 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	26.45 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.11 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	26.45 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.11 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	12.40 %
Nitriliruptoria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria	2.48 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.83 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.11 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	10.74 %
Nitriliruptorales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Nitriliruptorales	2.48 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	0.83 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.11 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	10.74 %
Nitriliruptoraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Nitriliruptorales → Nitriliruptoraceae	2.48 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	0.83 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003203\|JGI25406J46586_10213721	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	564	Open in IMG/M
3300003373\|JGI25407J50210_10047727	All Organisms → cellular organisms → Bacteria	1088	Open in IMG/M
3300003373\|JGI25407J50210_10053933	All Organisms → cellular organisms → Bacteria	1016	Open in IMG/M
3300003373\|JGI25407J50210_10058325	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	972	Open in IMG/M
3300004463\|Ga0063356_101405387	Not Available	1027	Open in IMG/M
3300004463\|Ga0063356_102308209	Not Available	821	Open in IMG/M
3300004463\|Ga0063356_103156590	Not Available	710	Open in IMG/M
3300005562\|Ga0058697_10011144	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2979	Open in IMG/M
3300005981\|Ga0081538_10010136	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	7751	Open in IMG/M
3300005981\|Ga0081538_10045048	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2740	Open in IMG/M
3300005981\|Ga0081538_10334988	Not Available	549	Open in IMG/M
3300006169\|Ga0082029_1308365	Not Available	600	Open in IMG/M
3300006845\|Ga0075421_100357961	All Organisms → cellular organisms → Bacteria	1762	Open in IMG/M
3300006854\|Ga0075425_100080046	All Organisms → cellular organisms → Bacteria	3692	Open in IMG/M
3300009098\|Ga0105245_12694157	Not Available	550	Open in IMG/M
3300009100\|Ga0075418_10746870	Not Available	1056	Open in IMG/M
3300009100\|Ga0075418_11235862	Not Available	810	Open in IMG/M
3300009147\|Ga0114129_11271700	Not Available	913	Open in IMG/M
3300010036\|Ga0126305_10955220	Not Available	586	Open in IMG/M
3300010037\|Ga0126304_10791383	Not Available	643	Open in IMG/M
3300010038\|Ga0126315_10170095	All Organisms → cellular organisms → Bacteria	1300	Open in IMG/M
3300010039\|Ga0126309_10574601	Not Available	705	Open in IMG/M
3300010040\|Ga0126308_10578389	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	764	Open in IMG/M
3300010042\|Ga0126314_10511685	Not Available	872	Open in IMG/M
3300010042\|Ga0126314_10995288	Not Available	622	Open in IMG/M
3300010045\|Ga0126311_10134441	All Organisms → cellular organisms → Bacteria	1743	Open in IMG/M
3300010045\|Ga0126311_10581371	Not Available	885	Open in IMG/M
3300010145\|Ga0126321_1411869	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	975	Open in IMG/M
3300010362\|Ga0126377_10613778	Not Available	1133	Open in IMG/M
3300010395\|Ga0058701_10369938	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	851	Open in IMG/M
3300010395\|Ga0058701_10681841	Not Available	565	Open in IMG/M
3300011000\|Ga0138513_100028624	All Organisms → cellular organisms → Bacteria	801	Open in IMG/M
3300012021\|Ga0120192_10028962	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	909	Open in IMG/M
3300012207\|Ga0137381_10519875	Not Available	1038	Open in IMG/M
3300012908\|Ga0157286_10213620	Not Available	658	Open in IMG/M
3300012913\|Ga0157298_10121774	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	740	Open in IMG/M
3300012937\|Ga0162653_100015266	All Organisms → cellular organisms → Bacteria	979	Open in IMG/M
3300012937\|Ga0162653_100079691	Not Available	535	Open in IMG/M
3300012938\|Ga0162651_100016583	Not Available	970	Open in IMG/M
3300014488\|Ga0182001_10506204	Not Available	557	Open in IMG/M
3300015372\|Ga0132256_100061310	All Organisms → cellular organisms → Bacteria	3531	Open in IMG/M
3300017654\|Ga0134069_1367754	All Organisms → cellular organisms → Bacteria	518	Open in IMG/M
3300018028\|Ga0184608_10119366	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1117	Open in IMG/M
3300018031\|Ga0184634_10265305	All Organisms → cellular organisms → Bacteria	787	Open in IMG/M
3300018054\|Ga0184621_10142695	Not Available	861	Open in IMG/M
3300018071\|Ga0184618_10221900	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	795	Open in IMG/M
3300018078\|Ga0184612_10080191	All Organisms → cellular organisms → Bacteria	1704	Open in IMG/M
3300018466\|Ga0190268_11044576	Not Available	657	Open in IMG/M
3300018481\|Ga0190271_12656264	Not Available	601	Open in IMG/M
3300019259\|Ga0184646_1448886	Not Available	505	Open in IMG/M
3300019377\|Ga0190264_10381557	Not Available	903	Open in IMG/M
3300019767\|Ga0190267_10195206	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	942	Open in IMG/M
3300019868\|Ga0193720_1033509	All Organisms → cellular organisms → Bacteria	734	Open in IMG/M
3300020016\|Ga0193696_1106330	All Organisms → cellular organisms → Bacteria	718	Open in IMG/M
3300021412\|Ga0193736_1024536	Not Available	806	Open in IMG/M
3300022534\|Ga0224452_1041954	All Organisms → cellular organisms → Bacteria	1345	Open in IMG/M
3300022534\|Ga0224452_1079169	Not Available	995	Open in IMG/M
3300025949\|Ga0207667_10942262	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	853	Open in IMG/M
3300025972\|Ga0207668_11300857	Not Available	654	Open in IMG/M
3300026790\|Ga0208710_103127	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	815	Open in IMG/M
3300027750\|Ga0209461_10077954	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	719	Open in IMG/M
3300027909\|Ga0209382_12153845	All Organisms → cellular organisms → Bacteria	529	Open in IMG/M
3300028587\|Ga0247828_10013268	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Nitriliruptorales → Nitriliruptoraceae	3084	Open in IMG/M
3300028589\|Ga0247818_10021512	All Organisms → cellular organisms → Bacteria	4158	Open in IMG/M
3300028592\|Ga0247822_10565817	Not Available	906	Open in IMG/M
3300028596\|Ga0247821_10012954	All Organisms → cellular organisms → Bacteria	4452	Open in IMG/M
3300028597\|Ga0247820_10065377	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Nitriliruptorales → Nitriliruptoraceae	2149	Open in IMG/M
3300028597\|Ga0247820_10689049	Not Available	711	Open in IMG/M
3300028608\|Ga0247819_10298924	Not Available	901	Open in IMG/M
3300028704\|Ga0307321_1059949	Not Available	732	Open in IMG/M
3300028711\|Ga0307293_10283539	Not Available	525	Open in IMG/M
3300028716\|Ga0307311_10008716	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2369	Open in IMG/M
3300028716\|Ga0307311_10045534	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1157	Open in IMG/M
3300028722\|Ga0307319_10044202	All Organisms → cellular organisms → Bacteria	1393	Open in IMG/M
3300028771\|Ga0307320_10013301	All Organisms → cellular organisms → Bacteria	2946	Open in IMG/M
3300028809\|Ga0247824_10244768	All Organisms → cellular organisms → Bacteria	993	Open in IMG/M
3300028809\|Ga0247824_10349315	All Organisms → cellular organisms → Bacteria	843	Open in IMG/M
3300028810\|Ga0307294_10036770	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1373	Open in IMG/M
3300028811\|Ga0307292_10370216	Not Available	606	Open in IMG/M
3300028812\|Ga0247825_10068268	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Nitriliruptorales → Nitriliruptoraceae	2375	Open in IMG/M
3300028812\|Ga0247825_10169104	All Organisms → cellular organisms → Bacteria	1504	Open in IMG/M
3300028828\|Ga0307312_10735927	Not Available	653	Open in IMG/M
3300028872\|Ga0307314_10023431	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1423	Open in IMG/M
3300028876\|Ga0307286_10023911	All Organisms → cellular organisms → Bacteria	1983	Open in IMG/M
3300028878\|Ga0307278_10333438	Not Available	669	Open in IMG/M
3300028880\|Ga0307300_10015240	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1986	Open in IMG/M
3300028884\|Ga0307308_10046899	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2028	Open in IMG/M
3300028884\|Ga0307308_10464592	Not Available	607	Open in IMG/M
3300028889\|Ga0247827_10242440	All Organisms → cellular organisms → Bacteria	1021	Open in IMG/M
3300030496\|Ga0268240_10029749	Not Available	1090	Open in IMG/M
3300030496\|Ga0268240_10151936	Not Available	571	Open in IMG/M
3300031092\|Ga0308204_10228871	Not Available	593	Open in IMG/M
3300031548\|Ga0307408_100546747	All Organisms → cellular organisms → Bacteria	1021	Open in IMG/M
3300031548\|Ga0307408_101805666	Not Available	584	Open in IMG/M
3300031740\|Ga0307468_100726320	Not Available	835	Open in IMG/M
3300031824\|Ga0307413_10487172	Not Available	987	Open in IMG/M
3300031824\|Ga0307413_11336997	Not Available	628	Open in IMG/M
3300031852\|Ga0307410_10465276	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1034	Open in IMG/M
3300031852\|Ga0307410_11040893	Not Available	707	Open in IMG/M
3300031903\|Ga0307407_10001900	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	7890	Open in IMG/M
3300031903\|Ga0307407_10213933	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1299	Open in IMG/M
3300031903\|Ga0307407_11157110	Not Available	603	Open in IMG/M
3300031911\|Ga0307412_10245985	All Organisms → cellular organisms → Bacteria	1386	Open in IMG/M
3300031911\|Ga0307412_10641974	All Organisms → cellular organisms → Bacteria	904	Open in IMG/M
3300031995\|Ga0307409_100400009	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1311	Open in IMG/M
3300032002\|Ga0307416_100134525	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2233	Open in IMG/M
3300032002\|Ga0307416_100470430	All Organisms → cellular organisms → Bacteria	1314	Open in IMG/M
3300032002\|Ga0307416_101896143	Not Available	699	Open in IMG/M
3300032004\|Ga0307414_10783859	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	868	Open in IMG/M
3300032004\|Ga0307414_11763616	Not Available	577	Open in IMG/M
3300032004\|Ga0307414_11976472	Not Available	544	Open in IMG/M
3300032126\|Ga0307415_100272799	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1386	Open in IMG/M
3300032126\|Ga0307415_102045416	Not Available	558	Open in IMG/M
3300032159\|Ga0268251_10458434	Not Available	563	Open in IMG/M
3300033550\|Ga0247829_10150134	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1814	Open in IMG/M
3300033550\|Ga0247829_10592110	Not Available	921	Open in IMG/M
3300033551\|Ga0247830_10092165	All Organisms → cellular organisms → Bacteria → Proteobacteria	2111	Open in IMG/M
3300034115\|Ga0364945_0046072	Not Available	1209	Open in IMG/M
3300034172\|Ga0334913_141070	All Organisms → cellular organisms → Bacteria	514	Open in IMG/M
3300034377\|Ga0334931_167336	Not Available	533	Open in IMG/M
3300034687\|Ga0334905_082353	Not Available	503	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	62.81%
Host-Associated	Host-Associated	37.19%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	55.37%
Plants	Host-Associated → Plants	37.19%
Aquatic	Environmental → Aquatic	7.44%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	51.24%
Rhizosphere	Host-Associated → Plants → Rhizosphere	23.97%
Sediment	Environmental → Aquatic → Sediment	5.79%
Roots	Host-Associated → Plants → Roots	4.96%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.13%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	3.31%
Phylloplane	Host-Associated → Plants → Phylloplane	3.31%
Freshwater	Environmental → Aquatic → Freshwater	1.65%
Floodplain	Environmental → Terrestrial → Floodplain	0.83%
Phyllosphere	Host-Associated → Plants → Phyllosphere	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	50.41%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	22.31%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.79%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	4.96%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.13%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	3.31%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	3.31%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.65%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.83%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.83%
Loam	Environmental → Terrestrial → Soil → Loam	0.83%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.83%
Phylloplane/Leaf Surface	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	34.71%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	22.31%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	12.40%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.79%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	4.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.13%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	3.31%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	3.31%
Desert	Environmental → Terrestrial → Soil → Unclassified → Desert	2.48%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.65%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.83%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.83%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.83%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.83%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.83%
Unclassified	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	20.66%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	16.53%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	12.40%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	7.44%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere	4.96%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.96%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	4.13%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	3.31%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	3.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.48%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	2.48%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.65%
Sub-Biocrust Soil	Environmental → Terrestrial → Soil → Unclassified → Desert → Sub-Biocrust Soil	1.65%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.83%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.83%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.83%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.83%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.83%
Terrestrial	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial	0.83%
Termite Nest	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Desert → Soil	0.83%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.83%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.83%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.83%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.83%
Agave	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified → Agave	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003203	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300003373	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005562	Agave microbial communities from Guanajuato, Mexico - As.Ma.e	Host-Associated	Open in IMG/M
3300005981	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300006169	Termite nest microbial communities from Madurai, India	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010145	Soil microbial communities from Hawaii, USA to study soil gas exchange rates - KP-HI-INT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010395	Agave microbial communities from Guanajuato, Mexico - Or.Ma.e	Host-Associated	Open in IMG/M
3300011000	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t6i015	Environmental	Open in IMG/M
3300012021	Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - T1	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012908	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1	Environmental	Open in IMG/M
3300012913	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S043-104R-2	Environmental	Open in IMG/M
3300012937	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t5i015	Environmental	Open in IMG/M
3300012938	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t2i015	Environmental	Open in IMG/M
3300014488	Bulk soil microbial communities from Mexico - San Felipe (SF) metaG	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019259	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300019868	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s1	Environmental	Open in IMG/M
3300020016	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m1	Environmental	Open in IMG/M
3300021412	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2m1	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026790	Grasslands soil microbial communities from Gorham, Kansas, USA that are Nitrogen fertilized -NN607 (SPAdes)	Environmental	Open in IMG/M
3300027750	Agave microbial communities from Guanajuato, Mexico - As.Ma.rz (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028587	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3	Environmental	Open in IMG/M
3300028589	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1	Environmental	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300028596	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glycerol_Day14	Environmental	Open in IMG/M
3300028597	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day14	Environmental	Open in IMG/M
3300028608	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Xylose_Day6	Environmental	Open in IMG/M
3300028704	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_379	Environmental	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028716	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198	Environmental	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028809	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48	Environmental	Open in IMG/M
3300028810	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_151	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028812	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028872	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_204	Environmental	Open in IMG/M
3300028876	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028880	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300028889	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2	Environmental	Open in IMG/M
3300030496	Bulk soil microbial communities from Mexico - Penjamo (Pe) metaG (v2)	Environmental	Open in IMG/M
3300031092	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300031911	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1	Host-Associated	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032004	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3	Host-Associated	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300032159	Agave microbial communities from Guanajuato, Mexico - As.Ma.e (v2)	Host-Associated	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M
3300034115	Sediment microbial communities from East River floodplain, Colorado, United States - 29_s17	Environmental	Open in IMG/M
3300034172	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 9HMS	Environmental	Open in IMG/M
3300034377	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 27HNS	Environmental	Open in IMG/M
3300034687	Soil microbial communities from Mojave Desert, California, United States - 1NOC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25406J46586_102137212	3300003203	Tabebuia Heterophylla Rhizosphere	MLFSNLLVAIALTVLFPLGLMGMLAAGEWLERRTLATEEVVPRRLRRMDSKPPEAVEAMVLEETAHVVAQYWSATGRPASEAPTATNGDHPAGATG
JGI25407J50210_100477271	3300003373	Tabebuia Heterophylla Rhizosphere	MLFSNLAVAIALTVLFPLGLMGLLAAGEWLERRTLATEEVVPRRLRRMATKPPEAVEAMVLEETAHVVAQYWSATGRPASEAPTPGVA
JGI25407J50210_100539332	3300003373	Tabebuia Heterophylla Rhizosphere	MLFSNLLVAVALTVLFPLGLMGMLAAGEWLERRTLAAEEVLPRRLRRSLDTKPPEAVEAMVLEETAHVVAQYWSATGRQPSPTPQPSRNGNGGGR
JGI25407J50210_100583252	3300003373	Tabebuia Heterophylla Rhizosphere	MLFSNLLVAVALTVLFPLGLMGMLAAGEWLERRTLAAEEVLPRRLRRSLDTKPPEAVEAMVLEETAHVVAQYWSATGRQPSP
Ga0063356_1014053872	3300004463	Arabidopsis Thaliana Rhizosphere	MLFANLLFAIALTVVWPLGMLGLLAACAWLERRTLIPEEVVPRRIRRMEESTPEAVEAMVLQETDDVVSAYWSSPDHPY
Ga0063356_1023082091	3300004463	Arabidopsis Thaliana Rhizosphere	MLFSNLLVALALTVLFPLGLMGMLAAGEWLERRTLAAEEILPRRLRRMDSKPPEAVEAMVLEETA
Ga0063356_1031565901	3300004463	Arabidopsis Thaliana Rhizosphere	MLFSNLLVAIALTVLFPLGLMGMLAAGEWLERRTLAAEEVVPRRLRRMDSKPPEAVEAMVLEETAHVVAQYW
Ga0058697_100111445	3300005562	Agave	MLFSNLLVAVALTVLFPLGLMGMLAASEWLERRTLAAEEVLPRRLRRMDSEPPEAVEAMVLEETAHVVAEYWSATGRQPPP
Ga0081538_1001013610	3300005981	Tabebuia Heterophylla Rhizosphere	MLFSNLLVALALTVLFPLGLMGMLAASEWLERRTLAAEEVVPRRLRRMDDKPPEAVEAMVLEETAHVVAQYWSATGRPAGTA
Ga0081538_100450481	3300005981	Tabebuia Heterophylla Rhizosphere	MLFSNLLVAIALVVLFPLGLMGMLAVSEWLERRTLAAEEVLPRRLRRMDGKAPEAVEAMVLEETAHVVAQYWSATGRPAGGPPANGEHPAA
Ga0081538_103349882	3300005981	Tabebuia Heterophylla Rhizosphere	MLSSNLLVAVALTVLFPLGLMGMLAAGEWLERRTLAAEEVLPRRLRRSLDTKPPEAVEAMVLEETAHVVAQYWSAT
Ga0082029_13083651	3300006169	Termite Nest	MLFSNLLVAIALTVLFPLGLMGMLAAGEWLERRTLATEEVVPRRLRRMDSKPPEAVEAMVLEETAHVVAQYWSATGRPASAAP
Ga0075421_1003579613	3300006845	Populus Rhizosphere	MLFSNLLVAIALTVLFPLGLMGVLAASEWLERRTLAAEEVLPRRLRRMDGKPPEAVEAMVLEETAQVVAQYWSATGRPA
Ga0075425_1000800464	3300006854	Populus Rhizosphere	MLFSNLLVALALTVLFPLGLMGMLAASEWLERRTLAAEEILPRRLRRMDGKPPEAVEAMVLEETAHVV
Ga0105245_126941572	3300009098	Miscanthus Rhizosphere	MLFSNLLVAIALTVLFPLGLMGMLAAGEWLERRTLAAEEVVPRRLRRMESKPPEAVEAMVLEETAHVVAQYWSATGRPA
Ga0075418_107468701	3300009100	Populus Rhizosphere	MLFSNLAAAIALTVLFPLGLMGMLAAGEWLERRTLAADEVVPRRFRRMERKPPEAVEAMVLEETAQVVAQ
Ga0075418_112358621	3300009100	Populus Rhizosphere	MLFSNLLVAIALTVLFPLGLMGVLAASEWLERRTLAAEEILPRRLRRMDGKPPEAVEAMVLEETAQVVAQ
Ga0114129_112717002	3300009147	Populus Rhizosphere	MLLSNLAVAIALTVLFPLGLMGMLAAGEWLERRTLATDEVVPRRFRRMERKPPEAVEAMV
Ga0126305_109552201	3300010036	Serpentine Soil	MLFSNLLVAIALTVLFPLGLMGMLAAGEWLERRTLATEEVVPRRLRRMESKPPEAVEAM
Ga0126304_107913832	3300010037	Serpentine Soil	MLFSNLLVAIALTVLFPLGLMGMLAAGEWLERRTLAAEEVVPRRLRRMESKPPEAVEAMVLEETAHVVAQYWSATGRPASG
Ga0126315_101700953	3300010038	Serpentine Soil	MLFSNLLVAIALTVLFPLGLMGLLAAGEWLERRTLATEEVVPRRLRRMDSKPPEEVEAMVLEETAHVVAQYWSATGR
Ga0126309_105746011	3300010039	Serpentine Soil	MLFSNLLVAIALTVLFPLGLMGMLAAGEWLERRTLAAEEVVPRRLRRMDSKPPEAVEAMVLEETAHVVAQYWSATGR
Ga0126308_105783892	3300010040	Serpentine Soil	MLFSNLLVAIAFTVLFPLGLMGVLTVGEWLERRTLAADEVLPRRLRRMDSKPPEAVEAMVLEETAHVVAQYWSA
Ga0126314_105116852	3300010042	Serpentine Soil	MLFSNLLVALALTVLFPLGLMGMLAAGEWLERRTLAAEEILPRRLRRMDGKPPEAVEAMVLEETAHVVAQYWSATGR
Ga0126314_109952882	3300010042	Serpentine Soil	MLFSNLLVAIAFTVLFPLGLMGVLTVGEWLERRTLAADEVLPRRLRRMDSKPPEAVEAMVLEETAHVVAQYWSATG
Ga0126311_101344413	3300010045	Serpentine Soil	MLFSNLLVAIALTVLFPLGLMGMLAAGEWLERRTLAAEEVVPRRLRRMDSKPPEAVEAMVLEETAHVVAQYWSATGRPAPETPA
Ga0126311_105813711	3300010045	Serpentine Soil	MLFSNLLVAIAFTVLFPLGLMGVLTVGEWLERRTLAAEEVLPRRLRRMDSKPPEAVEAMVLEETAHVVAQYWSAT
Ga0126321_14118692	3300010145	Soil	MLFSNLLVAIALTVLFPLGLMGMLAAGDWLERRTLAAEEVVPRRLRRMERKPPEAIEAMVLEETAHVVAQYWSATGRPASSPPANGPPTPNGGLSAGSPAPDT
Ga0126377_106137782	3300010362	Tropical Forest Soil	MLLSNLAVAIALTVLFPLGLMGMLAAGEWLERRTLATDEVVPRRFRRMERKPPEAVEAMVLEETAQVVTQYWSATGRPASEAGPPSPTAGGGQP
Ga0058701_103699381	3300010395	Agave	MLFSNLLVAVALTVLFPLGLMGMLAAGEWLERRTLAAEEVLPRRLRRMDSEPPEAVEAMVLEETAHVVAEYWSATGRQPPPAPQPSRNGNGRGRH
Ga0058701_106818411	3300010395	Agave	MLFSNLLVAIALTVLFPLGLMGLLAAGEWLERRTLAADEVVPRRLRRMDGKPPEEVEAIVLEETAHV
Ga0138513_1000286241	3300011000	Soil	MLFSNLLVAIALTVLFPLGLMGMLAAGEWLERRTLATEEVVPRRLRRMESKPPEAVEAMVLEETAHVVAQYWSATGRPASGAPTAN
Ga0120192_100289621	3300012021	Terrestrial	MLFNNLLLAVTLTVLWPLGLLGVLAAAEWLERRTLATEEIVPRRLQRMANKPPEPVEAMVAEETANVVAAYWSATGRQ
Ga0137381_105198752	3300012207	Vadose Zone Soil	MLFSNLLVAIVLTTLWPLGLLGVLAACAWLERRTLVTGEVLPRRIQRMERKPPEAVEAMVLEETAEIVAA
Ga0157286_102136202	3300012908	Soil	MWFSNLLVAIALTVLFPLGLMGVLAAGEWLERRTLAAEEILPRRLRRMDSEPPEAVEAMVLEE
Ga0157298_101217741	3300012913	Soil	MLFSNLLVALALTVLFPLGLMGMLAAGEWLERRTLAAEEILPRRLRRMDSKPPEAVEAMVLEETAHVVAQY
Ga0162653_1000152662	3300012937	Soil	MLFSNLLVAIALTVLFPLGLMGVLAASEWLERRTLAAEEILPRRLRRMDGKPPEAVEAMVLEETAQVVAQY
Ga0162653_1000796911	3300012937	Soil	MLFSNLLVAIALTVLFPLGLMGMLTASEWLERRTLAAEDVLPRRLRRMDSKPAEAVEAMVLEETAHVVAQYWSATGRPAPQT
Ga0162651_1000165831	3300012938	Soil	MLFSNLLVALALTVLFPLGLMGMLAASEWLERRTLAAEEVLPRRLRRMDGKPPEAVEAMVLEETAHVVAQYWSATGRPAGEP
Ga0182001_105062041	3300014488	Soil	MLFSNLLVAIALTVLFPLGLMGMLAAGEWLERRTLATEEVLPRRLRRMESKPPEAVEAMVLEETAHVVAQYWSATGRPASEA
Ga0132256_1000613104	3300015372	Arabidopsis Rhizosphere	MLFSNLLVAIALTVLFPLGLMGMLAAGEWLERRTLAAEEVVPRRLRRMDSKPPEAVEAMVLEETAHVVAQYWSATGRPASQAPAPETAAPQTPAPLAAPEGH
Ga0134069_13677541	3300017654	Grasslands Soil	MLFSNLLVALALTVLFPLGLMGMLAAGEWLERRTLAAEEVLPRRLRRMDSKPPEAVEAMVLEETAHVVAQYWSATGRPAGQPPANGGQP
Ga0184608_101193661	3300018028	Groundwater Sediment	MLFSNLLVAIALTVLFPLGLMGMLTASEWLERRTLAAEEVVPRRLRRMDSKPPEAVEAMVLEETAQVVAQYWSATGRPANGTPAPNGDRPAE
Ga0184634_102653051	3300018031	Groundwater Sediment	MLFSNLLVAIALTVLFPLGLMGMLTASEWLERRTLAAEEVLPRRLRRMDGKPPEEVEAMVLEETAQVVAQYWSATGRSASDAPAA
Ga0184621_101426952	3300018054	Groundwater Sediment	MLFSNLLVAIALTVLFPLGLMGMLAVGEWLERRTLAAEEVVPRRLRRMDNKPPEAVEAMVLEETAHVVAQYWSATGR
Ga0184618_102219001	3300018071	Groundwater Sediment	MLFSNLLVAIALTVLFPLGLMGMLTASEWLERRTLAAEEVVPRRLRRMERKPPEAVE
Ga0184612_100801913	3300018078	Groundwater Sediment	MLFSNLLVAIALTVLFPLGLMGVLAASEWLERRTLAAEEILPRRLRRMDGKPPEAVEAMVLEETAQVVAQYWSATGRSASDAPAAGAPSNGPPSN
Ga0190268_110445761	3300018466	Soil	MLFSNLLVALALTVLFPLGLMGMLTASEWLERRTLAAEEVLPRRLRRMDSEPPEAVEAMVLEETAHVVA
Ga0190271_126562641	3300018481	Soil	MLFSNLLVAIALTVLFPLGLMGVLAASEWLERRTLAAEDVLPRRLRRMDAKPPEAVEAMVLEETAQVVAQYW
Ga0184646_14488861	3300019259	Groundwater Sediment	MLFSNLLIAIAVTTLWPLGLLGVLAACAWLERRTLLPEEIVPRRIRQMESKPPEAVEAMVLEETAQVVAAYWSSTGRPLPAGGASETN
Ga0190264_103815573	3300019377	Soil	MLFSNLLVAIALTVLFPLGLMGMLAAGEWLERRTLAAEEVLPRWLRRMDGKPPEAVEAMVLEETAHVVAQY
Ga0190267_101952061	3300019767	Soil	MLFSNLLVAIAFTVLFPLGLMGVLAAGEWLERRTLAAEEILPRRLRRMDSKPPEAVEAMVLEETAHVVAQY
Ga0193720_10335091	3300019868	Soil	MLFSNLLVAIALTVLFPLGLMGMLTASEWLERRTLAAEEVVPRRLRRMDSKPPEAVEAMVLEETAHVVAQYWSATGRPANGPPAPNGDQPAAAPAPAPS
Ga0193696_11063302	3300020016	Soil	MLFSNLLVAIALTVLFPLGLMGMLTASEWLERRTLAAEEVLPRRLRRMDSKPPEAVEAMVLEETA
Ga0193736_10245362	3300021412	Soil	MLFSNLLVALALTVLFPLGLMGMLAASEWLERRTLAPEVVVPRRLSRMDGKPPEAIEAMVLEETAHVVAEYWSATGRTVPAVPVNGQR
Ga0224452_10419543	3300022534	Groundwater Sediment	MLFSNLLVAIALTVLFPLGLMGVLAASEWLERRTLAAEEILPRRLRRMDGKPPEEVEAMVLEETAQVV
Ga0224452_10791692	3300022534	Groundwater Sediment	MLFSNLLVAIALTVLFPLGLMGMLAAGEWLERRTLAAEEVVPRRLRRMDSKPPEAVEAMVLEETAHVVAQYWSATGRPAPQTPAPETPAP
Ga0207667_109422622	3300025949	Corn Rhizosphere	MRLAPLSRFAPIALTVLFPLGLMGMLAAGEWLERRTLAAEEVVPRRLRRMESKPPEAVEA
Ga0207668_113008571	3300025972	Switchgrass Rhizosphere	MLFSNLLVAIALTVLFPLGLMGMLAAGEWLERRTLAAEEVVPRRLRRMESKPPEAVEAMVLEETAHVVAQYWS
Ga0208710_1031272	3300026790	Soil	MLFSNLLVAVALTVLFPLGLMGMLAAGEWLERRTLAAEEVLPRRLRRMDSEPPEAVEAMVLEETAHVVAQYWSATGRPAGDAPAPPPAA
Ga0209461_100779542	3300027750	Agave	MLFSNLLVALALTVLFPLGLMGMLAAGEWLERRTLAAEEVLPRRLRRMDSKPPEAVEAMVLEETAHVVAQYWSATGRPVDE
Ga0209382_121538451	3300027909	Populus Rhizosphere	MLFSNLLVAIALTVLFPLGLMGVLAASEWLERRTLAAEEVLPRRLRRMDGKPPEAVEAMVLEETAQVVAQYWSATGRPVSDAPAAGAPPNGPLS
Ga0247828_100132681	3300028587	Soil	MLFSNLLVAIALTVLFPLGLMGVLAASEWLERRTLAAEEILPRRLRRMDGKPPEEVEAMVLEETAQVVAQYWSATGRSASDAPAAGAPSNG
Ga0247818_100215124	3300028589	Soil	MLFSNLLVAIALTVLFPLGLMGVLAASEWLERRTLAAEEILPRRLRRMDGKPPEEVEAMVLEETAQVVAQYWSATGRSASDAPAAGAPSNGALSNGAPPQAVPAPANGGGDGL
Ga0247822_105658172	3300028592	Soil	MLFSNLLVAIALTVLFPLGLMGVLAASEWLERRTLAAEEILPRRLRRMDGKPPEEVEAMVLEETAQVVAQYWSATGRSASDAPAAGAPSNGAV
Ga0247821_100129541	3300028596	Soil	MLFSNLLVAIALTVLFPLGLMGVLAASEWLERRTLAAEEILPRRLRRMDGKPPEEVEAMVLEETAQVVAQYWSATGRSASDAPAAGAPSNGAPSN
Ga0247820_100653773	3300028597	Soil	MLFSNLLVAIALTVLFPLGLMGVLAASEWLERRTLAAEEILPRRLRRMDGKPPEEVEAMVLEETAQVVAQYWSATGRSASDAPAAGA
Ga0247820_106890492	3300028597	Soil	MLFSNLLVAIALTVLFPLGLMGMLAAGEWLERRTLAAEEVVPRRLRRMESKPPEAVEAMVLEETAHVVAQYWSATGRPASQAPAPETP
Ga0247819_102989241	3300028608	Soil	MLFSNLLVAIALTVLFPLGLMGVLAASEWLERRTLAAEEVLPRRLRRMDGKPPEAVEAMVLEETAQVVAQY
Ga0307321_10599491	3300028704	Soil	MLFSNLLVALALTVLFPLGLMGVLAASEWLERRTLAAEEVLPRRLRRMDGKPPEAVEAMVLEETAHVVAQYWSATGRPAGEPPANG
Ga0307293_102835391	3300028711	Soil	MLFSNLLVAIALTVLFPLGLMGMLAAGEWLERRTLAAEEVVPRRLRRMDSKPPEAVEAMVLEET
Ga0307311_100087164	3300028716	Soil	MLFSNLLVALALTVLFPLGLMGVLAASEWLERRTLAAEEVLPRRLRRMDGKPPEAVEAMV
Ga0307311_100455343	3300028716	Soil	MLFSNLLVAIALTVLFPLGLMGMLTASEWLERRTLAAEEVVPRRLRRMDSKPPEAVEAMVLEETAHVVAQYWSATGRPANGPP
Ga0307319_100442021	3300028722	Soil	MLFSNLLVAIALTVLFPLGLMGMLAAGEWLERRTLATEEVVPRRLRRMDSKPPEAVEAMVLEETAHVVAQYWSATGRPASQNPAPQIPAPETPA
Ga0307320_100133011	3300028771	Soil	MLFSNLLVAIALTVLFPLGLMGMLTASEWLERRTLAAEEVLPRRLRRMDSKPAEAVEAMVLEETAHVVAQ
Ga0247824_102447682	3300028809	Soil	MLFSNLLVAIALTVLFPLGLMGMLAAGEWLERRTLAAEEVVPRRLRRMESKPPEAVEAMVLEETAHVVAQYWSAT
Ga0247824_103493151	3300028809	Soil	MLFSNLLVAIALTVLFPLGLMGVLAASEWLERRTLAAEEILPRRLRRMDGKPPEEVEAMVLEETAQVVAQYWSATGRSASDAPAAGAPSNGAPSNGAPSNGAPPQAVPAPANGGGAPLD
Ga0307294_100367703	3300028810	Soil	MLFSNLLVALALTVLFPLGLMGVLAASEWLERRTLAAEEVLPRRLRRMDGKPPEAVEAMVLEETAHVVAQYWSATGRPAGEPPANGGQPVPGH
Ga0307292_103702162	3300028811	Soil	MLFSNLLVAIALTVLFPLGLMGMLAAGEWLERRTLAADEVVPRRLRRMDSKPPEAVEAMVLEETAHV
Ga0247825_100682681	3300028812	Soil	MLFSNLLVAIALTVLFPLGLMGVLAASEWLERRTLAAEEILPRRLRRMDGKPPEEVEAMVLEETAQVVAQYWSATGRSASDAPAAGAPSNGPPSNGAPSN
Ga0247825_101691041	3300028812	Soil	MLFSNLLVAIALTVLFPLGLMGMLAAGEWLERRTLAAEEVVPRRLRRMESKPPEAVEAMVLEETAHVVAQYWSATGRPASQAPTPQT
Ga0307312_107359272	3300028828	Soil	MLFSNLLVAIALTVLFPLGLMGMLTASEWLERRTLAAEEVVPRRLRRMDSKPPEAVEAMVLEETAHVVAQYWSATGRPANGTPAPNGDQPA
Ga0307314_100234311	3300028872	Soil	MLFSNLLVALALTVLFPLGLMGVLAASEWLERRTLAAEEVLPRRLRRMDGKPPEAVEAMVLEETAHVVAQYWSATGRPAGEPPANGGQPV
Ga0307286_100239113	3300028876	Soil	MLFSNLLVAIALTVLFPLGLMGVLAASEWLERRTLAAEEILPRRLRRMDGKPPEEVEAMVLEETAQVVAQYWSATGRSASDAPAAGATSNGAPSNGPPSN
Ga0307278_103334381	3300028878	Soil	MLFSNLLVAIALTVLFPLGLMGMLTASEWLERRTLAAEEVVPRRLRRMDSKPPEAVEAMVLEETAHVVAQYWSATGRPANGTPTPNGDRPA
Ga0307300_100152401	3300028880	Soil	MLFSNLLVAIALTVLFPLGLMGVLAAGEWLERRTLAAEEVVPRRLRRMDSKPPEAVEAMVLEETAHVVAQYWSATGRPAPQTPDPQTSAPEI
Ga0307308_100468993	3300028884	Soil	MLFSNLLVAIALTVLFPLGLMGMLTASEWLERRTLATDEVVPRRLRRMDSKPPEAVEAMVLEETAHVVAQYWSATGRPANGTPAPNGDQPAAAPAPPPSRN
Ga0307308_104645921	3300028884	Soil	MLFSNLLVVIALTTLWPLGMLGVLAGCAWLERRTLIPEEIVPRRIERMDRKPPEAVEAMVLEETAQVVAAYWSSTGRPLPTGAPPPNGEASRTASVPARANGRLPAVANGR
Ga0247827_102424402	3300028889	Soil	MLFSNLLVAIALTVLFPLGLMGMLAAGEWLERRTLAAEEVVPRRLRRMESKPPEAVEAMVLEETAHVVAQYWSATGRQGA
Ga0268240_100297491	3300030496	Soil	MLFSNLLVAIALTVLFPLGLMGVLAASEWLERRTLATEEVVPRRLRRMDGKPPEAVEAMVLEETAHVVAQYWSATGRPVSEALAPDGD
Ga0268240_101519361	3300030496	Soil	MLFSNLLVAIAFTVLFPLGLMGVLTAGEWLERRTLAAEEVLPRRLRRMDSKPPEAVEAMVLEETAHVVAQYWSA
Ga0308204_102288711	3300031092	Soil	MLFSNLLVAIALTVLFPLGLMGMLAAGEWLERRTLAAEEVVPRRLRRMDSKPPEAVEAMVLEETAHVVAQYWSATGRPAPESPVTESPVPE
Ga0307408_1005467472	3300031548	Rhizosphere	MLFNNLLLAVALTVLWPLWLLGVLAACEWLERRTLATEEILPRRLRRMADKPPEPIEAMVAEETASV
Ga0307408_1018056662	3300031548	Rhizosphere	MLFSNLLVAVALTVLFPLGLMGMLAAGEWLERRTLAAEEVLPRRLRRMDSEPPEAVEAMVLEETAHVVAEYWSATGRQPPPAPQPSRN
Ga0307468_1007263202	3300031740	Hardwood Forest Soil	MLFSNLLVAIALTVLFPLGLMGMLAAGEWLERRTLAAEEVVPRRLRRMDSKPPEAVEAMVLEETAHVVAQYWSATGRPASQAP
Ga0307413_104871722	3300031824	Rhizosphere	MLFSNLLVALALTVLFPLGLMGMLTASEWLERRTLAAEEVLPRRLRRMDGKPPEAVEAMVLEETAHVVAQYWSATGRPAGEPPAND
Ga0307413_113369972	3300031824	Rhizosphere	MLFNNLLLAVALTVLWPLWLLGVLAACEWLERRTLATEEILPRRLRRMADKPPEPIEAMVAEETASVVAAYWSATGRPV
Ga0307410_104652761	3300031852	Rhizosphere	MLFSNLLVAIALTVLFPLGLMGMLAAGEWLERRTLAPEEVLPRRLRRMERKPPEAVEAMVLEETAHVVAQYWSATGRPASGPA
Ga0307410_110408932	3300031852	Rhizosphere	MLFSNLLVALALTVLFPLGLMGMLTASEWLERRTLAAEEVLPRRLRRMDGKPPEAVEAMVLEETAHVVAQYWSATGRPAGEPPANGGQPAPG
Ga0307407_100019009	3300031903	Rhizosphere	MLFSNLLVAIALTVLFPLGLMGMLAAGEWLERRTLAAEEVVPRRLRRMDSKPPEAVEAMVLEETAH
Ga0307407_102139331	3300031903	Rhizosphere	MLFSNLLVAIALTVLFPLGLMGMLAASEWLERRTLAAEEVVPRRLRRMDSRPPEEVEAMVLEETAH
Ga0307407_111571101	3300031903	Rhizosphere	MLFSNLLVALALTVLFPLGLMGMLTASEWLERRTLAAEEVLPRRLRRMDGKPPEAVEAMVLEETAHVVAQ
Ga0307412_102459853	3300031911	Rhizosphere	MLFSNLLVAIALTVLFPLGLMGMLAASEWLERRTLAAEEVVPRRLRRMDSRPPEEVEAMVLE
Ga0307412_106419742	3300031911	Rhizosphere	MLFSNLLVAIALTVLFPLGLMGMLAAGEWLERRTLAAEEVVPRRLRRMDSKPPEAVEAMVLEETAHVVAQYWSATGRPA
Ga0307409_1004000093	3300031995	Rhizosphere	MLFSNLLVAIALTVLFPLGLMGMLAAGEWLERRTLATEEVVPRRLRRMDSKPPEAVEAMVLEETAHV
Ga0307416_1001345254	3300032002	Rhizosphere	MLFSNLLVAIALTVLFPLGLMGMLAAGEWLERRTLATEEVVPRRLRRMESKPPEAVEAMVLEETAHVVAQYWSATGRPA
Ga0307416_1004704301	3300032002	Rhizosphere	MLFSNLLVALALTVLFPLGLMGMLTASEWLERRTLAAEEVLPRRLRRMDGKPPEAVEAMVLEETAHVVAQYWSATGRPAGEPPANGGQPAPSPP
Ga0307416_1018961432	3300032002	Rhizosphere	MLFSNLLVAIALTVLFPLGLMGMLAAGEWLERRTLAAEEVVPRRLRSMESKPPEAVEAMVLEETAH
Ga0307414_107838591	3300032004	Rhizosphere	MLFSNLLVAIALTVLFPLGLMGMLAAGEWLERRTLATEEVVPRRLRRMDSKPPEAVEAMVLEETAHVVAQYWSATGRPASEAPTPGSVQATN
Ga0307414_117636161	3300032004	Rhizosphere	MLFSNLLVAIALTVLFPLGLMGMLAAGEWLERRTLAAEEVVPRRLRRMDSKPPEAVEAMV
Ga0307414_119764721	3300032004	Rhizosphere	MLFSNLLVAIALTVLFPLGLMGMLAAGEWLERRTLATEEVVPRRLRRMDNKPPEAVEAMV
Ga0307415_1002727991	3300032126	Rhizosphere	MLFSNLLVALALTVLFPLGLMGMLTASEWLERRTLAAEEVLPRRLRRMDGKPPEAVEAMVLEETAHVVAQYWSATGRQPSPG
Ga0307415_1020454161	3300032126	Rhizosphere	MLFSNLLVAIALTVLFPLGLMGMLAAGEWLERRTLAAEEVVPRRLRRMESKPPEAVEAMVLEETAHVVAQYWSATGRPASGAPTA
Ga0268251_104584341	3300032159	Agave	MLFSNLLVAIALTVLFPLGLMGMLAAGEWLERRTLATEEVVPRRLRRMESKPPEAVEAMVLEETAHVVAQYWSA
Ga0247829_101501341	3300033550	Soil	MLFSNLLVAIALTVLFPLGLMGMLAAGEWLERRTLAAEEVVPRRLRRMESKPPEAVEAMVLEETAHVVAQYWSATGRPASQ
Ga0247829_105921101	3300033550	Soil	MLFSNLLVAIALTVLFPLGLMGVLAASEWLERRTLAAEEILPRRLRRMDGKPPEEVEAMVLEETAQVVAQYWSATGRSASDAPAAGAPSNGAPSNGAPSNGAPS
Ga0247830_100921651	3300033551	Soil	MLFSNLLVAIALTVLFPLGLMGVLAASEWLERRTLAAEEILPRRLRRMDGKPPEEVEAMVLEETAQVVAQYWSATWAVSSS
Ga0364945_0046072_902_1207	3300034115	Sediment	MLFSNLLVAIALTVLFPLGLMGVLAASEWLERRTLAAEEILPRRLRRMDGKPPEAVEAMVLEETAQVVAQYWSATGRSASDAPAAGAPSNGPPPNGAPPQAV
Ga0334913_141070_270_512	3300034172	Sub-Biocrust Soil	MLFSNLLVAVALTVLFPLGLMGMLAASEWLERRTLAAEEVLPRRLRRSMDTKPPEAVEAMVLEETAHVVAEYWSATGRQRS
Ga0334931_167336_339_533	3300034377	Sub-Biocrust Soil	MLFSNLLVAIALTVLFPLGLMGMLAASEWLERRTLAAEEVLPRRLRRSMDSKPPEAVEAMVLEET
Ga0334905_082353_3_290	3300034687	Soil	MLFSNLLVAIALTVLFPLGLMGMLAASEWLERRTLATEEVVPRRLRRMESKPPEAVEAMVLEETAHVVAQYWSATGRPAPEPPAAHPNGDQPDPGA

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F072726

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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