Metagenome Family F072723

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F072723
Family Type	Metagenome
Number of Sequences	121
Average Sequence Length	115 residues
Representative Sequence	MACKPFSITLAVLAPDNKRQISFGITKGCISDDQAFYVLNFVLRDLVNGDFQDRVRLHVEVGDTDSDKAQRMIDRGLTMTQLSWLQGPVTNKTKTLTPGTTSNPAAEKTIANIVNK
Number of Associated Samples	93
Number of Associated Scaffolds	121

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	84.30 %
% of genes near scaffold ends (potentially truncated)	24.79 %
% of genes from short scaffolds (< 2000 bps)	77.69 %
Associated GOLD sequencing projects	82
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.47

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (57.851 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere (11.570 % of family members)
Environment Ontology (ENVO)	Unclassified (33.884 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (50.413 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 20.14% β-sheet: 32.64% Coil/Unstructured: 47.22%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.47
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.47
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 121 Family Scaffolds
PF13795	HupE_UreJ_2	4.96
PF00041	fn3	1.65
PF04972	BON	1.65
PF08281	Sigma70_r4_2	1.65
PF14224	DUF4331	0.83
PF00155	Aminotran_1_2	0.83
PF13517	FG-GAP_3	0.83
PF00069	Pkinase	0.83
PF03572	Peptidase_S41	0.83
PF13620	CarboxypepD_reg	0.83
PF00930	DPPIV_N	0.83
PF05593	RHS_repeat	0.83
PF05531	NPV_P10	0.83
PF02018	CBM_4_9	0.83
PF12770	CHAT	0.83

COG ID	Name	Functional Category	% Frequency in 121 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.31
COG0793	C-terminal processing protease CtpA/Prc, contains a PDZ domain	Posttranslational modification, protein turnover, chaperones [O]	0.83
COG0823	Periplasmic component TolB of the Tol biopolymer transport system	Intracellular trafficking, secretion, and vesicular transport [U]	0.83
COG1506	Dipeptidyl aminopeptidase/acylaminoacyl peptidase	Amino acid transport and metabolism [E]	0.83
COG3209	Uncharacterized conserved protein RhaS, contains 28 RHS repeats	General function prediction only [R]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.85 %
All Organisms	root	All Organisms	42.15 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.85 %
cellular organisms	root	All Organisms → cellular organisms	42.15 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.85 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	42.15 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.85 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	22.31 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	10.74 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.13 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	1.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.85 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	10.74 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	9.09 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	8.26 %
unclassified Proteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria	3.31 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	1.65 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.85 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	10.74 %
unclassified Blastocatellia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia	8.26 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.26 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	3.31 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1.65 %
Blastocatellales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales	0.83 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.85 %
Cytophagia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia	10.74 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	8.26 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.26 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	3.31 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	1.65 %
Pyrinomonadaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae	0.83 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.85 %
Cytophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales	10.74 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	8.26 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.26 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	3.31 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1.65 %
unclassified Pyrinomonadaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae	0.83 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.85 %
Spirosomaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Spirosomaceae	10.74 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	8.26 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.26 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	3.31 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1.65 %
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	0.83 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.85 %
Dyadobacter	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Spirosomaceae → Dyadobacter	10.74 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	8.26 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.26 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	3.31 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1.65 %
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	0.83 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.85 %
unclassified Dyadobacter	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Spirosomaceae → Dyadobacter → unclassified Dyadobacter	10.74 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	8.26 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.26 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	3.31 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1.65 %
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	0.83 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.85 %
Dyadobacter sp. MSC1_007	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Spirosomaceae → Dyadobacter → unclassified Dyadobacter → Dyadobacter sp. MSC1_007	10.74 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	8.26 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.26 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	3.31 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1.65 %
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	0.83 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2228664022\|INPgaii200_c0677186	Not Available	646	Open in IMG/M
3300000955\|JGI1027J12803_100097261	Not Available	761	Open in IMG/M
3300000956\|JGI10216J12902_103312354	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	2649	Open in IMG/M
3300003203\|JGI25406J46586_10015781	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	3172	Open in IMG/M
3300003267\|soilL1_10017869	All Organisms → cellular organisms → Bacteria → Acidobacteria	10217	Open in IMG/M
3300003319\|soilL2_10046633	All Organisms → cellular organisms → Bacteria	9359	Open in IMG/M
3300003324\|soilH2_10170707	Not Available	1168	Open in IMG/M
3300003993\|Ga0055468_10062005	Not Available	979	Open in IMG/M
3300004052\|Ga0055490_10067094	Not Available	965	Open in IMG/M
3300004114\|Ga0062593_100267136	Not Available	1428	Open in IMG/M
3300004114\|Ga0062593_101567495	Not Available	713	Open in IMG/M
3300004157\|Ga0062590_101021772	Not Available	788	Open in IMG/M
3300004268\|Ga0066398_10153733	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Spirosomaceae → Dyadobacter → unclassified Dyadobacter → Dyadobacter sp. MSC1_007	579	Open in IMG/M
3300004633\|Ga0066395_10008387	All Organisms → cellular organisms → Bacteria → Acidobacteria	3728	Open in IMG/M
3300004643\|Ga0062591_102380022	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	554	Open in IMG/M
3300005184\|Ga0066671_10369653	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Spirosomaceae → Dyadobacter → unclassified Dyadobacter → Dyadobacter sp. MSC1_007	913	Open in IMG/M
3300005289\|Ga0065704_10492141	Not Available	673	Open in IMG/M
3300005331\|Ga0070670_101104089	Not Available	723	Open in IMG/M
3300005332\|Ga0066388_100262070	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2369	Open in IMG/M
3300005332\|Ga0066388_103912595	Not Available	760	Open in IMG/M
3300005345\|Ga0070692_11132081	Not Available	554	Open in IMG/M
3300005434\|Ga0070709_10608567	Not Available	842	Open in IMG/M
3300005440\|Ga0070705_100087744	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1929	Open in IMG/M
3300005444\|Ga0070694_100051291	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2784	Open in IMG/M
3300005444\|Ga0070694_100610675	Not Available	879	Open in IMG/M
3300005444\|Ga0070694_100754463	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	795	Open in IMG/M
3300005458\|Ga0070681_10639181	Not Available	979	Open in IMG/M
3300005545\|Ga0070695_101252053	Not Available	612	Open in IMG/M
3300005545\|Ga0070695_101840752	Not Available	508	Open in IMG/M
3300005547\|Ga0070693_100003994	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	6929	Open in IMG/M
3300005547\|Ga0070693_100753544	Not Available	718	Open in IMG/M
3300005563\|Ga0068855_100841324	Not Available	973	Open in IMG/M
3300005577\|Ga0068857_100481280	Not Available	1163	Open in IMG/M
3300005615\|Ga0070702_101812910	Not Available	510	Open in IMG/M
3300005618\|Ga0068864_101578421	Not Available	660	Open in IMG/M
3300005713\|Ga0066905_100074374	All Organisms → cellular organisms → Bacteria → Acidobacteria	2202	Open in IMG/M
3300005764\|Ga0066903_100321292	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2472	Open in IMG/M
3300005764\|Ga0066903_102430448	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1014	Open in IMG/M
3300005764\|Ga0066903_105759720	Not Available	651	Open in IMG/M
3300006049\|Ga0075417_10202707	Not Available	940	Open in IMG/M
3300006049\|Ga0075417_10291602	Not Available	790	Open in IMG/M
3300006169\|Ga0082029_1506590	Not Available	669	Open in IMG/M
3300006173\|Ga0070716_100013095	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	4220	Open in IMG/M
3300006173\|Ga0070716_100181796	Not Available	1381	Open in IMG/M
3300006755\|Ga0079222_10045255	Not Available	2004	Open in IMG/M
3300006755\|Ga0079222_11540573	Not Available	626	Open in IMG/M
3300006755\|Ga0079222_12200607	Not Available	548	Open in IMG/M
3300006804\|Ga0079221_10335124	Not Available	905	Open in IMG/M
3300006804\|Ga0079221_11402383	Not Available	556	Open in IMG/M
3300006806\|Ga0079220_10128115	Not Available	1365	Open in IMG/M
3300006806\|Ga0079220_10621553	Not Available	773	Open in IMG/M
3300006844\|Ga0075428_100062082	All Organisms → cellular organisms → Bacteria → Acidobacteria	4091	Open in IMG/M
3300006844\|Ga0075428_100111211	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2985	Open in IMG/M
3300006894\|Ga0079215_10480511	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Spirosomaceae → Dyadobacter → unclassified Dyadobacter → Dyadobacter sp. MSC1_007	767	Open in IMG/M
3300006903\|Ga0075426_10004772	All Organisms → cellular organisms → Bacteria	9599	Open in IMG/M
3300006904\|Ga0075424_100040227	All Organisms → cellular organisms → Bacteria	4865	Open in IMG/M
3300009094\|Ga0111539_10749920	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1136	Open in IMG/M
3300009147\|Ga0114129_11086362	Not Available	1002	Open in IMG/M
3300009156\|Ga0111538_10361975	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1836	Open in IMG/M
3300009162\|Ga0075423_10202395	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2082	Open in IMG/M
3300009174\|Ga0105241_10131624	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2026	Open in IMG/M
3300009174\|Ga0105241_10819378	Not Available	859	Open in IMG/M
3300009792\|Ga0126374_11254632	Not Available	596	Open in IMG/M
3300009840\|Ga0126313_10320508	Not Available	1215	Open in IMG/M
3300010038\|Ga0126315_10513029	Not Available	766	Open in IMG/M
3300010041\|Ga0126312_10488790	Not Available	880	Open in IMG/M
3300010044\|Ga0126310_10190412	Not Available	1340	Open in IMG/M
3300010046\|Ga0126384_10654234	Not Available	926	Open in IMG/M
3300010359\|Ga0126376_11234438	Not Available	764	Open in IMG/M
3300010362\|Ga0126377_10152934	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	2169	Open in IMG/M
3300010373\|Ga0134128_12136079	Not Available	617	Open in IMG/M
3300010397\|Ga0134124_10059036	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3242	Open in IMG/M
3300010397\|Ga0134124_11894771	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Spirosomaceae → Dyadobacter → unclassified Dyadobacter → Dyadobacter sp. MSC1_007	632	Open in IMG/M
3300010399\|Ga0134127_10832808	Not Available	973	Open in IMG/M
3300010399\|Ga0134127_10896582	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	942	Open in IMG/M
3300010401\|Ga0134121_10471933	All Organisms → cellular organisms → Bacteria → Acidobacteria	1149	Open in IMG/M
3300010401\|Ga0134121_11449137	Not Available	699	Open in IMG/M
3300010401\|Ga0134121_12424520	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Spirosomaceae → Dyadobacter → unclassified Dyadobacter → Dyadobacter sp. MSC1_007	565	Open in IMG/M
3300012208\|Ga0137376_10388502	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Spirosomaceae → Dyadobacter → unclassified Dyadobacter → Dyadobacter sp. MSC1_007	1212	Open in IMG/M
3300012960\|Ga0164301_10454297	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	912	Open in IMG/M
3300013296\|Ga0157374_11146471	Not Available	798	Open in IMG/M
3300014326\|Ga0157380_13419694	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Spirosomaceae → Dyadobacter → unclassified Dyadobacter → Dyadobacter sp. MSC1_007	508	Open in IMG/M
3300015371\|Ga0132258_10485663	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	3086	Open in IMG/M
3300015371\|Ga0132258_11206149	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Spirosomaceae → Dyadobacter → unclassified Dyadobacter → Dyadobacter sp. MSC1_007	1913	Open in IMG/M
3300015372\|Ga0132256_100435292	Not Available	1417	Open in IMG/M
3300015372\|Ga0132256_101304001	Not Available	839	Open in IMG/M
3300015373\|Ga0132257_104046249	Not Available	533	Open in IMG/M
3300015374\|Ga0132255_100312074	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Spirosomaceae → Dyadobacter → unclassified Dyadobacter → Dyadobacter sp. MSC1_007	2267	Open in IMG/M
3300015374\|Ga0132255_101847530	Not Available	918	Open in IMG/M
3300018027\|Ga0184605_10148404	Not Available	1054	Open in IMG/M
3300018061\|Ga0184619_10028107	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	2354	Open in IMG/M
3300018422\|Ga0190265_10530589	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1292	Open in IMG/M
3300018422\|Ga0190265_12999125	Not Available	564	Open in IMG/M
3300018466\|Ga0190268_11166971	Not Available	635	Open in IMG/M
3300018469\|Ga0190270_10987679	Not Available	867	Open in IMG/M
3300019377\|Ga0190264_10002554	All Organisms → cellular organisms → Bacteria	4289	Open in IMG/M
3300021445\|Ga0182009_10255011	Not Available	872	Open in IMG/M
3300021445\|Ga0182009_10500650	Not Available	640	Open in IMG/M
3300021445\|Ga0182009_10797752	Not Available	516	Open in IMG/M
3300024179\|Ga0247695_1010182	All Organisms → cellular organisms → Bacteria → Acidobacteria	1323	Open in IMG/M
3300025796\|Ga0210113_1097316	Not Available	582	Open in IMG/M
3300025911\|Ga0207654_10095721	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1819	Open in IMG/M
3300025912\|Ga0207707_10333514	Not Available	1308	Open in IMG/M
3300025939\|Ga0207665_10660594	Not Available	820	Open in IMG/M
3300025945\|Ga0207679_11041300	Not Available	750	Open in IMG/M
3300025949\|Ga0207667_11942649	Not Available	550	Open in IMG/M
3300025971\|Ga0210102_1048601	Not Available	916	Open in IMG/M
3300025981\|Ga0207640_10606139	Not Available	928	Open in IMG/M
3300025981\|Ga0207640_11968106	Not Available	529	Open in IMG/M
3300026088\|Ga0207641_12115132	Not Available	564	Open in IMG/M
3300026312\|Ga0209153_1179786	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Spirosomaceae → Dyadobacter → unclassified Dyadobacter → Dyadobacter sp. MSC1_007	760	Open in IMG/M
3300027639\|Ga0209387_1081127	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Spirosomaceae → Dyadobacter → unclassified Dyadobacter → Dyadobacter sp. MSC1_007	767	Open in IMG/M
3300027873\|Ga0209814_10202420	Not Available	858	Open in IMG/M
3300027873\|Ga0209814_10262725	Not Available	749	Open in IMG/M
3300027909\|Ga0209382_10237673	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	2073	Open in IMG/M
3300028047\|Ga0209526_10074229	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	2394	Open in IMG/M
3300028145\|Ga0247663_1009998	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1314	Open in IMG/M
3300028578\|Ga0272482_10261359	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Spirosomaceae → Dyadobacter → unclassified Dyadobacter → Dyadobacter sp. MSC1_007	549	Open in IMG/M
3300031576\|Ga0247727_10159539	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Spirosomaceae → Dyadobacter → unclassified Dyadobacter → Dyadobacter sp. MSC1_007	2158	Open in IMG/M
3300031716\|Ga0310813_10560782	Not Available	1006	Open in IMG/M
3300031731\|Ga0307405_10267025	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	1281	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	69.42%
Host-Associated	Host-Associated	30.58%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	64.46%
Plants	Host-Associated → Plants	30.58%
Aquatic	Environmental → Aquatic	4.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	63.64%
Rhizosphere	Host-Associated → Plants → Rhizosphere	19.01%
Rhizoplane	Host-Associated → Plants → Rhizoplane	11.57%
Marine	Environmental → Aquatic → Marine	3.31%
Sediment	Environmental → Aquatic → Sediment	1.65%
Cave	Environmental → Terrestrial → Cave	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	42.98%
Loam	Environmental → Terrestrial → Soil → Loam	20.66%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	15.70%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.61%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	4.96%
Wetlands	Environmental → Aquatic → Marine → Wetlands	3.31%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.31%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.65%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.14%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	15.70%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	13.22%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	13.22%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.44%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.61%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	4.96%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.13%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	3.31%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.31%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.65%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.65%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.83%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	11.57%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	10.74%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	7.44%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	6.61%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	6.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.13%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	4.13%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	4.13%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	3.31%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.31%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	3.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.48%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	2.48%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.48%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.65%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.65%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.65%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.65%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.83%
Termite Nest	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.83%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.83%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.83%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.83%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2228664022	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300003203	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300003267	Sugarcane bulk soil Sample L1	Environmental	Open in IMG/M
3300003319	Sugarcane bulk soil Sample L2	Environmental	Open in IMG/M
3300003324	Sugarcane bulk soil Sample H2	Environmental	Open in IMG/M
3300003993	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D2	Environmental	Open in IMG/M
3300004052	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqC_D2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004268	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006169	Termite nest microbial communities from Madurai, India	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300024179	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK36	Environmental	Open in IMG/M
3300025796	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D2 (SPAdes)	Environmental	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025971	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqC_D2 (SPAdes)	Environmental	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026312	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120 (SPAdes)	Environmental	Open in IMG/M
3300027639	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028145	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK04	Environmental	Open in IMG/M
3300028578	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT160D0	Environmental	Open in IMG/M
3300031576	Biofilm microbial communities from Wishing Well Cave, Virginia, United States - WW16-25	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPgaii200_06771861	2228664022	Soil	PFSITLAVLAPDNKRQVSFAVSKGCITDDQPFYVLNFVLRDRVDGDFQDRVRLHVTVGEEDNPKAQALIDAGLTKTQLSFLQGPMTNKTKTLPKGTTNDPSSEKSLVSIVNK
JGI1027J12803_1000972613	3300000955	Soil	MPCKPFSITLAVLAPDNKRQVSFAVSKGCITDDQPFYVLNFVLRDRVDGDFQDRVRLHVTVGEEDNPKAQALIDAGLTKTQLSFLQGPMTNKTKTLPKG
JGI10216J12902_1033123542	3300000956	Soil	MSCKPFSVTLAVLAPDNKRQISFGITKGCISDDKAFFILNFVLRDLVNGDFQDRVRLHVEVGDTDSDKAQRMIERGLTMTQLNWLQGPVTTKTKTLAPGTTANPAAEKTVAQIVNK*
JGI25406J46586_100157812	3300003203	Tabebuia Heterophylla Rhizosphere	MACKPFSVTLAVLAPDNKRQISFGITKGCISDDQAFFVLNFVLRDLVDGDFQDRVRLHVEVGDTDSDKAQRIIDRGLTMTQLSWLQGPVTNKTKNLPPGTTSNPVAEKTVGQIVNK*
soilL1_100178697	3300003267	Sugarcane Root And Bulk Soil	MACKPFSVTLAVLAPDNKRQISFGITKGCISDDQAFYVLNFVLRDLVNGEFQDRVRLHVEVGDTDSDKAQRLIDRGLTMTQLNWLQGPVTSKTKNLPPGTTSNPAAEKTVGQVVNK*
soilL2_100466334	3300003319	Sugarcane Root And Bulk Soil	MACKPFSVTLAVLAPDNKRQISFGITKGCISDDQAFFVLNFVLRDLVNGDFQDRVRLHVEVGDTDSDKAQRIIDRGLTMTQLSWLQGPVTNKTKALPVGTTSNPAAENTLANIVNK*
soilH2_101707072	3300003324	Sugarcane Root And Bulk Soil	MACKPFSVTLAVLAPDNKRQISFGITKGCISDDQAFFVLNFVLRDLVNGDFQDRVRLHVEVGDTDSDKAQRIIDRGLTMTQLNWLQGPVTNKTKGLPVGTTNNPAAEQTLGNIVNK*
Ga0055468_100620051	3300003993	Natural And Restored Wetlands	PFSITLAVLAPDNKRQISFGITKGCITDDQAFYVLNFVLRDLVNGDFQDRVRLHVEIGDTDSDKAQRMIDRGLTMTQLSWLQGPVTNKTKNLASGTTANPAAEKTLANIINK*
Ga0055490_100670942	3300004052	Natural And Restored Wetlands	MACKPFSITLAVLAPDNKRQISFGITKGCITDDQAFYVLNFVLRDLVNGDFQDRVRLHVEIGDTDGDKAQRMIDRGLTMTQLSWLQGPVTNKTKSLPPGTNSNAAAESTLSNIVNK*
Ga0062593_1002671362	3300004114	Soil	MACKPFSVTLAVLAPDNKRQISFGITKGCISDDQAFFVLNFVLRDLVNGDFQDRVRLHVEVGDTDSDKAQRIIDRGLTMTQLSWLQGPVTNKTKALPVGTTTNPAAETTLSNIVNK*
Ga0062593_1015674952	3300004114	Soil	MACKPFSVTLAVLAPDNKRQISFGVTKGCISDTQAFFVLNFVLRDLVDGDFQDRVRLHVEVGDTDSDKAQRMIDRGLTMTQLSWLQGPVTNKTKTLTPGT
Ga0062590_1010217722	3300004157	Soil	MACKPFSVTLAVLAPDNKRQISFGVTKGCISDTQAFFVLNFVLRDLVDGDFQDRVRLHVEVGDTDSDKAQRMIDRGLTMTQLSWLQGPVTNKTKTLTPGTTSNPAAEKTIANIVNK*
Ga0066398_101537331	3300004268	Tropical Forest Soil	MPCKPFSITLAVLAPDNKRQVSFAVSKGCITDDQPFYVLNFVLRDRVNGDFQDRVRLHVTVGEEDNPKAQTLIDAGLTKTQLNFLQGPVTNKTKILPKGTTSDPSSEKTLASIVNK*
Ga0066395_100083873	3300004633	Tropical Forest Soil	MPCKPFSITLAVLAPDNKRQVSFAVSKGCITDDQPFYVLNFVLRDRVDGDFQDRVRLHVTVGEEDNPKAQALIDAGLTKTQLGFLQGPMTNKTKTLPKGTTSDSPSEKSLASIVNK*
Ga0062591_1023800221	3300004643	Soil	VLAPDNKRQISFGITKGCISDDQAFFVLNFVLRDLVNGDFQDRVRLHVEVGDTDSDKAQRIIDRGLTMTQLSWLQGPVTNKTKALPVGTTTNPAAETTLSNIVNK*
Ga0066671_103696532	3300005184	Soil	MACKPFSVVLAVLAPDNKRQVSFAVSKGCINDNQPFYVLNFVLRDKINGEFQDRVRLHVTIGDTDNPKAQRLIDQGLTMTQLQFLQGPVTSKAKALPVGTTSDPPTEKQLATIVNK*
Ga0065704_104921412	3300005289	Switchgrass Rhizosphere	MPCKPFSITLAVLAPDNKRQVSFAVSKGCITDDQPFYVLNFVLRDRVDGDFQDRVRLHVTVGEEDNPKAQALIDAGLTKTQLSFLQGPMTNKTKTLPKGTTNDPSSEKSLVSIVNK*
Ga0070670_1011040891	3300005331	Switchgrass Rhizosphere	MACKPFSVTLAVLAPDNKRQISFGITKGCITDDQAFFVLNFVLRDLVNGEFQDRVRLHVEVGDTDSDKAQRLIDRGLTMTQLNWLQGPVTSKTKNLAAGTTSNPAAEKTVSQIVNK*
Ga0066388_1002620702	3300005332	Tropical Forest Soil	MPCKPFSITLAVLAPDNKRQVSFAVSKGCITDDQPFYVLNFVLRDRVDGDFQDRVRLHVTVGEEDNPKAQALIDAGLTKTQLSFLQGPMTNKTKTLPKGTTSDPSSEKSLVSIVNK*
Ga0066388_1039125952	3300005332	Tropical Forest Soil	MPCKPFSITLAVLAPDNKRQVSFAVSKGCITDDQPFYVLNFVLRDRVNGDFQDRVRLHVTVGEDDNPRAQALIDAGLTKTQLNFLQGPLTNKTKTLPTGTTSDPSSEKSLASIVNK*
Ga0070692_111320811	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MACKPFSVTLAVLAPDNKRQISFGVTKGCISDTQAFFVLNFVLRDLVNGDFQDRVRLHVEVGDTDSDKAQRMIDRGLTMTQLSWLQGPVTNKTKTLTPGTTSNPAAEKTIANIVNK*
Ga0070709_106085671	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MACKPFSITLAVLAPDNKRQISFGITKGCISDDQAFYVLNFVLRDLVNGDFQDRVRLHVEVGDTDSDKAQRMIDRGLTMTQLSWLQGPVTNKTKNLAPGTTADPNAEKTLTNIVN
Ga0070705_1000877442	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MACKPFSIVLAVLAPDNKRQVSFGITRGCINDDKAFFVLNFVLRDKVGDEFQDRVRLHVTVGDTDNAKAQRLIDQGMTMTQLQFLQGPVTSKTKNLPAGTTSNPAAEKTLATIVNK*
Ga0070694_1000512912	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MACKPFSVTLAVLAPDNKRQISFGVTKGCISDTQAFFVLNFVLRDLVDGDFQDRVRLHVEVGDTDSDKAQRMIDRGLTMTQLSWLQGPVTNKTKALTPGTTSNPAAEKTIANIVNK*
Ga0070694_1006106752	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MACKPFSITLAVLAPDNKRQISFGITKGCITDDQAFFVLNFVLRDLVNGDFQDRVRLHVEVGDTDSDKAQRMIDRGLTMTQLSWLQGPVTNKTKGLAPGTNSDPAAEKTIAQVVNK*
Ga0070694_1007544631	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MACKPFSVTLAVLAPDNKRQISFGITKGCITDNQAFYVLNFVLRDIVNGEFQDRVRLHVEVGDTDSDKAQRLIDRGLTMTQLNWLQGPVTSKTKNLPAGTTSNPAAEKTVGQVVNK*
Ga0070681_106391812	3300005458	Corn Rhizosphere	MSCKPFSITLAVLAPDNKRQISFGITKGCISDDKAFFILNFVLRDLVDGEFQDRVRLHVEVGDTDSDKAQRMIERGLTMTQLNWLQGPVTSKTKSLAPGTTSNPAAEKTVAQIVNK*
Ga0070695_1012520531	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MACKPFSITLAVLAPDNKRQISFGITKGCISDTQAFFVLNFVLRDLVDGDFQDRVRLHVEVGDTDSDKAQRMIDRGLTMTQLSWLQGPVTNKTKALPPGTTSNPAAEKTIA
Ga0070695_1018407521	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MACKPFSITLAVLAPDNKRQISFGITKGCISDDQAFYVLNFVLRDLVNGDFQDRVRLHVEVGDTDSDKAQRMIDRGLTMTQLSWLQGPVTNKTKNLAPGTTADPNAEKTLTNIVNK*
Ga0070693_1000039942	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MACKPFSVTLAVLAPDNKRQISFGITKGCISDDQAFFVLNFVLRDLVDGDFQDRVRLHVEVGDTDSDKAQRIIDRGLTMTQLSWLQGPVTNKTKALPVGTTNNPAAEKTLGNIINK*
Ga0070693_1007535442	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	KGVNMACKPFSVTLAVLAPDNKRQISFGITKGCISDDQAFFVLNFVLRDLVDGDFQDRVRLHVEVGDTDSDKAQRIIDRGLTMTQLSWLQGPVTNKTKALPVGTTTNPAAETTLSNIVNK
Ga0068855_1008413242	3300005563	Corn Rhizosphere	MACKPFSVTLAVLAPDNKRQISFGVTKGCISDTQAFFVLNFVLRDLVDGDFQDRVRLHVEVGDTDSDKAQRMIDRGLTMTQLSWLQGPVTNKTKALPPGTTSNPAAEKTIANIVNK*
Ga0068857_1004812802	3300005577	Corn Rhizosphere	MACKPFSVTLAVLAPDNKRQISFGITKGCVTDDQAFYVLNFVLRDLVNGEFQDRVRLHVEVGDTDSDKAQRLIDRGLTMTQLNWLQGPVTSKTKNLPAGTTSNPAAEKTVGQVVNK*
Ga0070702_1018129101	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MACKPFSVTLAVLAPDNKRQISFGITKGCISDDQAFFVLNFVLRDLVNGDFQDRVRLHVEVGDTDSDKAQRIIDRGLTMTQLSWLQGPVTNKTKALPVGTTNNAAAETTLSNIVNK*
Ga0068864_1015784211	3300005618	Switchgrass Rhizosphere	GITKGCISDDQAFFVLNFVLRDLVNGDFQDRVRLHVEVGDTDSDKAQRIIDRGLTMTQLSWLQGPVTNKTKALPVGTTNNAAAETTLSNIVNK*
Ga0066905_1000743742	3300005713	Tropical Forest Soil	MPCKPFSITLAVLAPDNKRQVSFAVSKGCITDDQPFYVLNFVLRDRVNGDFQDRVRLHVTIGEEDNPKAQALIDAGLTKTQLNFLQGPVTNKTKILPKGTTSDPSSEKTLASIVNK*
Ga0066903_1003212922	3300005764	Tropical Forest Soil	MPCKPFSITLAVLAPDNKRQVSFAVSKGCITDDQPFYVLNFVLRDRVNGDFQDRVRLHVTVGEEDNPKAQALIDAGLTKTQLNFLQGPVTNKTKILPKGTTSDPSSEKTLASIVNK*
Ga0066903_1024304482	3300005764	Tropical Forest Soil	MPCTPFSITLAVLAPDNKRQVSFAVSKGCITDDQPFYVLNFVLRDRVNGDFQDRVRLHVTVGEEDNPKAQALIDAGLTKTQLNFLQGPMTNKAKVLPKGTTNDPSSEKSLASIVNK*
Ga0066903_1057597201	3300005764	Tropical Forest Soil	MPCKPFSITLAVLAPDNKRQVSFAVSKGCITDDQPFYVLNFVLRDRVNGDFQDRVRLHVTVGEDDNPRAQALIDAGLTKTQLNFLQGPLTNKTKTLPTGTTSDPSSEKSLASIV
Ga0075417_102027071	3300006049	Populus Rhizosphere	APDNKRQVSFAVSKGCITDDQPFYVLNFVLRDRVDGDFQDRVRLHVTVGEEDNPKAQALIDAGLTKTQLSFLQGPLTNKTKALPKGTTSDPSSEKSLAAIVNK*
Ga0075417_102916022	3300006049	Populus Rhizosphere	MPCKPFSITLAVLAPDNKRQVSFAVSKGCITDDQPFYVLNFVLRDRVDGDFQDRVRLHVTVGEDDNPKAQALIDAGLTKTQLSFLQGPMTNKTKTLPKGTTNDPSSEKSLVSIVNK*
Ga0082029_15065901	3300006169	Termite Nest	MACKPFSVTLAVLAPDNKRQISFGITKGCISDDQAFYVLNFVLRDLVNGEFQDRVRLHVEVGDTDSEKAQRLIDRGLTMTQLNWLQGPVTSKTKNLAAGTTSNAAAEKTVAQVVNK*
Ga0070716_1000130952	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MACKPFSITLAVLAPDNKRQISFGITKGCISDDQPFYVLNFVLRDIVNGDFQDRVRLHVEVGDTDNDKAQRLIDRGLTMTQLNWLQGPVTSKTKSLPVGTTTNPTAEKTVSQIVNK*
Ga0070716_1001817962	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MSCKPFSVTLAVLAPDNKRQISFGITKGCISDDQAFYVLNFVLRDLVNGDFQDRVRLHVEVGDTDSDKAQRLIDRGLTMTQLNWLQGPVTSKTKNLPVGTTANPTAEKAVAATVSK*
Ga0079222_100452553	3300006755	Agricultural Soil	MACKPFSVTLAVLAPDNKRQISFGITKGCISDDKAFYVLNFVLRDIVNGDFQDRVRLHVEVGDTDSDKAQRMIDRGLTMTQLSWLQGPVTNKTKTLATGTTTDPNAEKTLGNIVNK*
Ga0079222_115405731	3300006755	Agricultural Soil	MGCKPFSVTLAVLAPDNKRQISFGITKGCISDDQAFFVLNFVLRDLVNGDFQDRVRLHVEVGDTDSDKAQRIIDRGLTMTQLSWLQGPVTNKTKGLP
Ga0079222_122006071	3300006755	Agricultural Soil	MSCKPFSITLAVLAPDNKRQISFGITKGCISDDQAFYVLNFVLRDLVNGDFQDRVRLHVEVGDTDSDKAQRMIDRGLTMTQLSWLQGPVTNKTKNLAPGTTSNPAAEKTLTNIV
Ga0079221_103351242	3300006804	Agricultural Soil	MACKPFSVTLAVLAPDNKRQISFGITKGCISDDQAFFVLNFVLRDLVNGDFQDRVRLHVEVGDTDSDKAQRIIDRGLTMTQLNWLQGPVTNKTKALPVGTTNNPAAEQTLGNIVNK*
Ga0079221_114023831	3300006804	Agricultural Soil	MACKPFSVTLAVLAPDNKRQISFGITKGCISDDQAFFVLNFVLRDLVNGDFQDRVRLHVEVGDTDSDKAQRIIDRGLTMTQLSWLQGPVTNKTKGLPVGTTNNPAAEQTLSNIVNK*
Ga0079220_101281152	3300006806	Agricultural Soil	MACKPFSVTLAVLAPDNKRQISFGITKGCISDDQAFFVLNFVLRDLVNGDFQDRVRLHVEVGDTDSDKAQRIIDRGLTMTQLNWLQGPVTNKTKGLPVGTTNNPAAEQTLSNIVNK*
Ga0079220_106215532	3300006806	Agricultural Soil	MPCKPFSVTLAVLAPDNKRQISFGITKGCISDDQAFFVLNFVLRDLVNGDFQDRVRLHVEVGDTDSDKAQRMIDRGLTMTQLSWLQGPVTNKTKTLAPGTTSNPAAEKTVANIVNK*
Ga0075428_1000620825	3300006844	Populus Rhizosphere	MPCKPFSITLAVLAPDNKRQVSFAVSKGCITDDQPFYVLNFVLRDRVDGDFQDRVRLHVTVGEDDNPKAQALIDAGLTKTQLSFLQGPMTNKTKTLPKGTTSDSSSEKSLASIVNK*
Ga0075428_1001112112	3300006844	Populus Rhizosphere	MPCTPFSITLAVLAPDNKRQVSFAVSKGCITDDQPFYVLNFVLRDRVDGDFQDRVRLHVTVGEEDNPKAQALIDAGLTKTQLSFLQGPLTNKTKALPKGTTSDPSSEKSLAAIVNK*
Ga0079215_104805112	3300006894	Agricultural Soil	MACKPFSVTLAVLAPDNKRQVSFSISKGCLNDDVAFYVLNFVLRDKIGDDFQDRVRLHVTVGDTDSPKAQKLIDHGMTMTQLQFLQGPITNKAKALPPGTTSDPAAEKQVAGILKK*
Ga0075426_100047726	3300006903	Populus Rhizosphere	MACKPFSITLAVLAPDNKRQISFGITKGCISDDQAFYVLNFVLRDLVNGDFQDRVRLHVEVGDTDSDKAQRIIDRGLTMTQLSWLQGPVTNKTKALAPGTTSNPTAEKTLSNIVNK*
Ga0075424_1000402272	3300006904	Populus Rhizosphere	MPCKPFSITLAVLAPDNKRQVSFAVSKGCITDDQPFYVLNFVLRDRVDGDFQDRVRLHVTVGEEDNPKAQALIDAGLTKTQLSFLQGPLTNKTKALPKGTTSDPSSEKSLAAIVNK*
Ga0111539_107499202	3300009094	Populus Rhizosphere	MPCKPFSITLAVLAPDNKRQVSFAVSKGCITDDQPFYVLNFVLRDRVDGDFQDRVRLHVTVGEDDNPKAQALIDAGLTKTQLSFLQGPMTNKTKTLPKGTTNDPSSEKTLVSIVNK*
Ga0114129_110863621	3300009147	Populus Rhizosphere	DNKRQVSFAVSKGCITDDQPFYVLNFVLRDRVDGDFQDRVRLHVTVGEEDNPKAQALIDAGLTKTQLSFLQGPMTNKTKTLPKGTTNDPSSEKSLVSIVNK*
Ga0111538_103619752	3300009156	Populus Rhizosphere	MPCKPFSITLAVLAPDNKRQVSFAVSKGCITDDQPFYVLNFVLRDRVDGDFQDRVRLHVTVGEDDNPKAQALIDAGLTKTQLSFLQGPMTNKTKTLPKGTTSDSPSEKSLASIVNK*
Ga0075423_102023953	3300009162	Populus Rhizosphere	MACKPFSVTLAVLAPDNKRQISFGVTKGCISDTQAFFVLNFVLRDLVNGDFQDRVRLHVEVGDTDSDKAQRMIDRGLTMTQLSWLQGPVTNKTKALTPGTTSNPAAEKTIANIVNK*
Ga0105241_101316242	3300009174	Corn Rhizosphere	MACKPFSVTLAVLAPDNKRQISFGITKGCISDDQAFFVLNFVLRDLVDGDFQDRVRLHVEVGDTDSDKAQRIIDRGLTMTQLSWLQGPVTNKTKSLPVGTTNNPAAEQTLSNIVNK*
Ga0105241_108193782	3300009174	Corn Rhizosphere	MACKPFSITLAVLAPDNKRQISFGITKGCISDDQAFYVLNFVLRDLVNGDFQDRVRLHVEVGDTDSDKAQRMIDRGLTMTQLSWLQGPVTNKTKTLTPGTTSNPAAEKTIANIVNK*
Ga0126374_112546321	3300009792	Tropical Forest Soil	NKRQVSFAVSKGCITDDQPFYVLNFVLRDRVDGDFQDRVRLHVTVGEEDNPKAQALIDAGLTKTQLGFLQGPMTNKTKTLPKGTTSDSPSEKSLASIVNK*
Ga0126313_103205082	3300009840	Serpentine Soil	MACKPFSITLAVLAPDNKRQISFGITKGCITDDQAFYVLNFVLRDLVNGEFQDRVRLHVEVGDTDSDKAQRMIDRGLTMTQLNWLQGPVTSKTKSLAPGTTANPAAEKTVGNIINK*
Ga0126315_105130291	3300010038	Serpentine Soil	SICGAVSSLERPKGEPMACKPFSITLAVLAPDNKRQISFGITKGCITDDHAFYVLNFVLRDLVNGEFQDRVRLHVEVGDTDSDKAQRMIDRGLTMTQLNWLQGPVTSKTKSLPPGTTSDPAAEKTVATVIKK*
Ga0126312_104887901	3300010041	Serpentine Soil	VRQTLPKKRFTSFDHYKQTSICGAVSSLERPKGDPMACKPFSITLAVLAPDNKRQISFGITKGCITDDQAFYVLNFVLRDLVNGEFQDRVRLHVEVGDTDSDKAQRMIDRGLTMTQLNWLQGPVTSKTKSLPAGTTSDPAAEKTVGTIIKK*
Ga0126310_101904122	3300010044	Serpentine Soil	MACKPFSVTLAVLAPDNKRQISFGITKGCISDDQAFFVLNFVLRDLVNGDFQDRVRLHVEIGDTDSDKAQRMVERGLTMTQLSWLQGPVTSKTKALPPGTTSNPAAEKTLATVVSK*
Ga0126384_106542342	3300010046	Tropical Forest Soil	MSCKPFSITLAVLAPDNKRQISFGITKGCISDDKAFFILNFVLRDIVNGDFQDRVRLHVEVGDTDSDKAQRMIERGLTMTQLNWLQGPVTTKTKNLAPGTTSNPAAEKTVGQIVNK*
Ga0126376_112344382	3300010359	Tropical Forest Soil	MSCKPFSVTLAVLAPDNKRQISFGITKSCITDNQAFYVLNFVLRDIVDGDFQDRVRLHVEVGDTDSDKAQRMIDRGLTMTQLSWLQGPVTNKTKALPVGTTANPAAEKTVSQIVNK*
Ga0126377_101529342	3300010362	Tropical Forest Soil	MPCKPFSITLAVLAPDNKRQVSFAVSKGCITDDQPFYVLNFVLRDRVDGDFQDRIRLHITVGEEDNPKAQALIDAGLTKTQLGFLQGPMTNKTKTLPKGTTSDSPSEKSLASIVNK*
Ga0134128_121360791	3300010373	Terrestrial Soil	MACKPFSITLAVLAPDNKRQISFGITKGCISDDQPFYVLNFVLRDLRNDHYQDRVRLHVEVGDTDNDKAQRLIDRGLTMTQLNWLQGPVTSKTKSLPVGTTTNPTAEKTVSQIVNKKARAHSNRT
Ga0134124_100590364	3300010397	Terrestrial Soil	MACKPFSVTLAVLAPDNKRQISFGVTKGCISDTQAFFVLNFVLRDLVDGDFQDRVRLHVEVGDTDSDKAQRMIDRGLTMTQLSWMPGPVTNKTKALTPGTTSNPAAEKTIANIVNK*
Ga0134124_118947711	3300010397	Terrestrial Soil	MACNPFSIVLAVLAPDNKRQISFGVTKGCINDDKAFYVINFVLRDRIGNEFQDRVRLHVTIGDTDNEKAQRLIDQGLTMTQLKFLTGPMTSKTKDLPTGTTSAPAAEKSLATIVNK*
Ga0134127_108328082	3300010399	Terrestrial Soil	MACKPFSITLAVLAPDNKRQISFGVTKGCISDTQAFFVLNFVLRDLVDGDFQDRVRLHVEVGDTDSDKAQRIIDRGLTMTQLSWLQGPVTNKTKALTPGTTSNPAAEKTIANIVNK*
Ga0134127_108965821	3300010399	Terrestrial Soil	VSFGITRGCINDDKAFFVLNFVLRDKVGDEFQDRVRLHVTVGDTDSAKAQRLIDQGMTMTQLQFLQGPVTSKTKNLPAGTTSNPAAEKTLATIVNK*
Ga0134121_104719331	3300010401	Terrestrial Soil	MACKPFSITLAVLAPDNKRQISFGITKGCISDDQAFYVLNFVLRDLVNGDFQDRVRLHVEVGDTDSDKAQRMIDRGLTMTQLSWLQGPVTNKTKNLA
Ga0134121_114491371	3300010401	Terrestrial Soil	DNKRQISFAVTKGCITDDKPFYVLNFVLRDKVGNDFQDRVRLHVTIGEEDNPKAQALMDLGLTKTQLNFLQGPVTNKTKTLPTGTTSDPSSEKTLATIVNK*
Ga0134121_124245202	3300010401	Terrestrial Soil	MPCKPFSIVLAVLAPDNKRQISFAMSRGCLDDDTPIYVINFVLRDKVGDDFQDRVRLHVTVGDTNNAKAEKMITNGMTMTQLEFLQGPVTTRARRLPVGT
Ga0137376_103885022	3300012208	Vadose Zone Soil	MACKPFSVVLAVLAPDNKRQVSFAVSKGCITDDQPFYVLNFVLRDKVNGGFQDRVRLHVTVGDTDNPKAQKLIDHGMTMTQLQFLQGPVTSSAKALPTGTTSDPATEKQLAAITKK*
Ga0164301_104542971	3300012960	Soil	AVLAPDNKRQISFGITKGCISDDQAFYVLNFVLRDLVNGDFQDRVRLHVEVGDTDSDKAQRMIDRGLTMTQLSWLQGPVTNKTKNLAPGTTADPNAEKTLTNIVNK*
Ga0157374_111464711	3300013296	Miscanthus Rhizosphere	MACKPFSVTLAVLAPDNKRQISFGITKGCISDDQAFFVLNFVLRDLVNADFQDSVRLHVEVGDPDSDKPQRIIDRGLTMTQLNWLQGPVTNKTKGLPVGTTNNPAAEQTLGNIVNK*
Ga0157380_134196941	3300014326	Switchgrass Rhizosphere	MAGCTPFSVNLAVLAPDNKRQVSFGITRGCLDANTPFYVLNFILRDQVGDDFQDRVNLHVTVGDTDNDKAQRMMAQGLTLAQLSYLQGPVTNKAKKLPTNTTSNPSTEKLVGGVVNVS*
Ga0132258_104856632	3300015371	Arabidopsis Rhizosphere	MACKPFSVTLAVLAPDNKRQISFGITKGCISDTQAFFVLNFILRDLVNGDFQDRVRLHVEVGDTDSDKAQRIIDRGLTMTQLSWLQGPVTNKTKGLPVGTTANPAAEKTIAQIVNK*
Ga0132258_112061491	3300015371	Arabidopsis Rhizosphere	MACKPFSITLAVLAPDNKRQISFGITKGCISDDKAFFVLNFVLRDLVSGEFQDRVRLHVEVGDTDSDKAQRIIERGLTMTQLNWLQGPVTSKTKSLPPGTTSNPAAEKTVGAIVNK
Ga0132256_1004352921	3300015372	Arabidopsis Rhizosphere	MACKPFSITLAVIAPDNKRQISFGITKGCISDDQAFYVLNFVLRDLVNGDFQDRVRLHVEVGDTDSDKAQRMIDRGLTMTQLSWLQGPVTNKTKALAPGTTTNPNAEKTLSNIVNK*
Ga0132256_1013040012	3300015372	Arabidopsis Rhizosphere	MACKPFSVTLAVLAPDNKRQISFGITKGCISDTQAFFVLNFVLRDLVNGDFQDRVRLHVEVGDTDSDKAQRIIDRGLTMTQLSWLQGPVTNKTKGLPVGTTANPAAEKTIANIVNK*
Ga0132257_1040462491	3300015373	Arabidopsis Rhizosphere	MACKPFSVTLAVLAPDNKRQISFGITKGCISDTQAFFVLNFILRDLVNGDFQDRVRLHVEVGDTDSDKAQRIIDRGLTMTQLSWLQGPVTNKAKGLPVGTTANP
Ga0132255_1003120742	3300015374	Arabidopsis Rhizosphere	MACKPFSITLAVLAPDNKRQISFGITKGCISDDKAFFVLNFVLRDLVSGEFQDRVRLHVEVGDTDSDKAQRIIERGLTMTQLNWLQGPVTSKTKSLPPGTTSNPAAEKTVGAIVNK*
Ga0132255_1018475302	3300015374	Arabidopsis Rhizosphere	MACKPFSVTLAVLAPDNKRQISFGITKGCISDTQAFFVLNFVLRDLVNGDFQDRVRLHVEVGDTDSDKAQRIIDRGLTMTQLSWLQGPVTNKTKGLPVGTTANPAAEKTIAQIVNK*
Ga0184605_101484042	3300018027	Groundwater Sediment	MPCKPFSIVLAVLAPDNKRQVSIGVSRGCHSDVDAFYIINFVLRDKLPTGEFQDRVRLFVSVGDTDNEKAQRLIDNGMTMTQLQFLQGPITNKAKSLKPGTTEDSATEKVIAGILKK
Ga0184619_100281072	3300018061	Groundwater Sediment	MPCKPFSIVLAVLAPDNKRQVSIGVSRGCHSDDDAFYIINFVLRDKLPTGEFQDRVRLFVSVGDTDNEKAQRLIDNGMTMTQLQFLQGPITNKAKSLKPGTTEDSATEKVIAGILKK
Ga0190265_105305893	3300018422	Soil	MACKPFSITLAVLAPDNKRQISFGITKGCITDDKAFYVLNFVLRDLVNGDFQDRVRLHVEIGDTDSDKAQRMIDRGLTMTQLSWLQGPVTNKTKSLAAGTTQDPAAEKTLG
Ga0190265_129991251	3300018422	Soil	MACKPFSITLAVLAPDNKRQISFGITKGCITDDQAFYVLNFVLRDLVNGDFQDRVRLHVEIGDTDSDKAQRMIDRGLTMTQLNWLQGPVTSKTRVLPVGTNSNPAAEKTLSNIVNK
Ga0190268_111669711	3300018466	Soil	MACKPFSITLAVLAPDNKRQISFGITKGCITDDQAFYVLNFVLRDLVNGDFQDRVRLHVEIGDTDSDKAQRMIDRGLTMTQLNWLQGPVTTKTKSLPTGTNANPGAEKTLSNIINK
Ga0190270_109876791	3300018469	Soil	MACMPFSITLAVLAPDNKRQISFGVTKGCISDDQAFYVLNFVLRDLVNGDFQDRVRLHVEIGDTDSDKAQRMIDRGLTMTQLNWLQGPVTSKTRSLATGTTSNAGAEKTLSNIVNK
Ga0190264_100025542	3300019377	Soil	MAGCTPFSVNLAVLAPDNKRQVSFGITRGCLDVNTPFYVLNFILRDKVGDDFQDRVNLHVTVGDTDNDKAQRIMAQGLTLAQLSYLQGPVTNKAKRLPTDTTSDPSTEKVISGVVNAS
Ga0182009_102550112	3300021445	Soil	MACKPFSVTLAVLAPDNKRQISFGITKGCISDDQAFFVLNFVLRDLVNGDFQDRVRLHVEVGDTDSDKAQRIIDRGLTMTQLNWLQGPVTNKTKALPVGTTNNPAAEQTLGNIVNK
Ga0182009_105006501	3300021445	Soil	MACKPFSVTLAVLAPDNKRQISFGITKGCISDDEAFYVLNFVLRDLVDGDFQDRVRLHVEVGDTDSDKAQRMIDRGLTMTQLSWLQGPVTNKTKGLPVGTTNNPAAEKTLTNIVNK
Ga0182009_107977521	3300021445	Soil	LNHKQPKGVNMGCKPFSVTLAVLAPDNKRQISFGITKGCISDDQAFFVLNFVLRDLVNGDFQDRVRLHVEVGDTDSDKAQRIIDRGLTMTQLSWLQGPVTNKTKGLPVGTTNNPAAEQTLGNIVNK
Ga0247695_10101822	3300024179	Soil	MSCKPFSVTLAVLAPDNKRQISFGITKGCITDDQAFYVLNFVLRDIVDGDFQDRVRLHVEVGDTDSDKAQRMIDRGLTMTQLSWLQGPVTNKTKTLPVGTTANPAAEKTVGQIVNK
Ga0210113_10973162	3300025796	Natural And Restored Wetlands	PDNKRQISFGITKGCITDDQAFYVLNFVLRDLVNGDFQDRVRLHVEIGDTDSDKAQRMIDRGLTMTQLSWLQGPVTNKTKNLASGTTANPAAEKTLANIINK
Ga0207654_100957212	3300025911	Corn Rhizosphere	MACKPFSVTLAVLAPDNKRQISFGITKGCISDDQAFFVLNFVLRDLVDGDFQDRVRLHVEVGDTDSDKAQRIIDRGLTMTQLSWLQGPVTNKTKSLPVGTTNNPAAEQTLSNIVNK
Ga0207707_103335142	3300025912	Corn Rhizosphere	MSCKPFSITLAVLAPDNKRQISFGITKGCISDDKAFFILNFVLRDLVDGEFQDRVRLHVEVGDTDSDKAQRMIERGLTMTQLNWLQGPVTSKTKSLAPGTTSNPAAEKTVAQIVNK
Ga0207665_106605942	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MACKPFSITLAVLAPDNKRQISFGITKGCISDDQPFYVLNFVLRDIVNGDFQDRVRLHVEVGDTDNDKAQRLIDRGLTMTQLNWLQGPVTSKTKSLPVGTTTNPTAEKTVSQIVNK
Ga0207679_110413001	3300025945	Corn Rhizosphere	MSCKPFSITLAVLAPDNKRQISFGITKGCISDDKAFFILNFVLRDLVDGEFQYRVRLHVEVGDTDSDKAQRMIERGLTMTQLNWLQGPVTSKTKSLAPGTTSNPAAEKTVAQIVNK
Ga0207667_119426491	3300025949	Corn Rhizosphere	MACKPFSVTLAVLAPDNKRQISFGVTKGCISDTQAFFVLNFVLRDLVDGDFQDRVRLHVEVGDTDSDKAQRMIDRGLTMTQLSWLQGPVTNKTKALPPGTTSNPAAEKTIANIVNK
Ga0210102_10486012	3300025971	Natural And Restored Wetlands	MACKPFSITLAVLAPDNKRQISFGITKGCITDDQAFYVLNFVLRDLVNGDFQDRVRLHVEIGDTDGDKAQRMIDRGLTMTQLSWLQGPVTNKTKSLPPGTNSNAAAESTLSNIVNK
Ga0207640_106061392	3300025981	Corn Rhizosphere	MACKPFSITLAVLAPDNKRQISFGITKGCITDDQAFFVLNFVLRDLVNGDFQDRVRLHVEVGDTDSDKAQRMIDRGLTMTQLSWLQGPVTNKTKGLAPGTNSDPAAEKTIAQVVNK
Ga0207640_119681061	3300025981	Corn Rhizosphere	MACKPFSVTLAVLAPDNKRQISFGITKGCISDDQAFFVLNFVLRDLVNGDFQDRVRLHVEVGDTDSDKAQRIIDRGLTMTQLSWLQGPVTNKTKALPVGTTTNPAAETTLSNIVNK
Ga0207641_121151321	3300026088	Switchgrass Rhizosphere	MACKPFSVTLAVLAPDNKRQISFGITKGCISDDKAFFILNFVLSDLVDGEFQDRVRLHVEVGDTDSDKAQRMIERGLTMTQLNWLQGPVTSKTKSLAPGTTSNPAAEKTVAQIVNK
Ga0209153_11797861	3300026312	Soil	MACKPFSVVLAVLAPDNKRQVSFAVSKGCINDNQPFYVLNFVLRDKINGEFQDRVRLHVTIGDTDNPKAQRLIDQGLTMTQLQFLQGPVTSKAKALPVGTTSDPPTEKQLATIVNK
Ga0209387_10811271	3300027639	Agricultural Soil	MACKPFSVTLAVLAPDNKRQVSFSISKGCLNDDVAFYVLNFVLRDKIGDDFQDRVRLHVTVGDTDSPKAQKLIDHGMTMTQLQFLQGPITNKAKALPPGTTSDPAAEKQVAGILKK
Ga0209814_102024202	3300027873	Populus Rhizosphere	ERSLQMPCKPFSITLAVLAPDNKRQVSFAVSKGCITDDQPFYVLNFVLRDRVDGDFQDRVRLHVTVGEEDNPKAQALIDAGLTKTQLSFLQGPLTNKTKALPKGTTSDPSSEKSLAAIVN
Ga0209814_102627252	3300027873	Populus Rhizosphere	MPCKPFSITLAVLAPDNKRQVSFAVSKGCITDDQPFYVLNFVLRDRVDGDFQDRVRLHVTVGEDDNPKAQALIDAGLTKTQLSFLQGPMTNKTKTLPKGTTNDPSSEKSLVSIVNK
Ga0209382_102376732	3300027909	Populus Rhizosphere	MPCTPFSITLAVLAPDNKRQVSFAVSKGCITDDQPFYVLNFVLRDRVDGDFQDRVRLHVTVGEDDNPKAQALIDAGLTKTQLSFLQGPMTNKTKTLPKGTTSDSSSEKSLASIVNK
Ga0209526_100742291	3300028047	Forest Soil	NKRQISFGVTKGCISDDQAFYILNFILRDLVNGEFQDRVRLHVEIGDTDGDKAQRLIDRGLTMTQLSFLQGPVTQKAKALATGTTSDPATEKTLATVVKK
Ga0247663_10099982	3300028145	Soil	MPCKPFSIVLAVLAPDNKRQISFAMSRGCLDDDTPIYVINFVLRDKVGDDFQDRVRLHVTVGDTNNAKAEKMITNGMTMTQLEFLQGPVTTRARRLPVGTTADQKTEDILKNVVTV
Ga0272482_102613591	3300028578	Soil	NLTNRKGDFMACKPFSVVLAVLAPDNKRQVSFGITKGCLSDDQAFYIINFVLRDTVDGEFQDRVRLHVTIGDTDNDKAQRMIDRGLTMTQLQFLQGPVTSKTKNLPPGTTANPQAEKTLANVVNK
Ga0247727_101595392	3300031576	Biofilm	MPCKPFSIVLAVLAPDNKRQVSFGVTKGCISDDQPFYVLNFVLRDKIGDEFQDRVRLHVTVGDTDNEKAQRLIDRGLTMTQIQFLQGPLTSKTKSLPSGTTSDPQAEKAVASIVKK
Ga0310813_105607821	3300031716	Soil	MACKPFSVTLAVLAPDNKRQISFGVTKGCISDTQAFFVLNFVLRDLVDGDFQDRVRLHVEVGDTDSDKAQRMIDRGLTMTQLSWLQGPVTNKTKALTPGTTSNPAAEKTIANIVNK
Ga0307405_102670252	3300031731	Rhizosphere	MACKPFSITLAVLAPDNKRQISFGITKGCITDDQAFYVLNFVLRDLVNGEFQDRVRLHVEVGDTDSDKAQRMIDRGLTMTQLNWLQGPVTSKTKSLPPGTTANPAAEKTVGNIINK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F072723

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences