NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F072307

Metagenome / Metatranscriptome Family F072307

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F072307
Family Type Metagenome / Metatranscriptome
Number of Sequences 121
Average Sequence Length 67 residues
Representative Sequence MDNANPSTGLMIPGERERNTLTYRQPGSMGGPASGSDVGGVPSVLMDPTTIAEHQREGGGAPSTRKVR
Number of Associated Samples 97
Number of Associated Scaffolds 121

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 37.19 %
% of genes near scaffold ends (potentially truncated) 30.58 %
% of genes from short scaffolds (< 2000 bps) 80.17 %
Associated GOLD sequencing projects 89
AlphaFold2 3D model prediction Yes
3D model pTM-score0.22

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (95.868 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere
(23.967 % of family members)
Environment Ontology (ENVO) Unclassified
(32.231 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(44.628 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Fibrous Signal Peptide: No Secondary Structure distribution: α-helix: 12.50%    β-sheet: 0.00%    Coil/Unstructured: 87.50%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.22
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 121 Family Scaffolds
PF00271Helicase_C 9.09
PF00118Cpn60_TCP1 8.26
PF00072Response_reg 8.26
PF02518HATPase_c 4.13
PF13545HTH_Crp_2 3.31
PF00166Cpn10 2.48
PF00282Pyridoxal_deC 2.48
PF01594AI-2E_transport 1.65
PF06745ATPase 1.65
PF06283ThuA 1.65
PF13188PAS_8 0.83
PF07689KaiB 0.83
PF00180Iso_dh 0.83
PF00174Oxidored_molyb 0.83

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 121 Family Scaffolds
COG0459Chaperonin GroEL (HSP60 family)Posttranslational modification, protein turnover, chaperones [O] 8.26
COG0076Glutamate or tyrosine decarboxylase or a related PLP-dependent proteinAmino acid transport and metabolism [E] 2.48
COG0234Co-chaperonin GroES (HSP10)Posttranslational modification, protein turnover, chaperones [O] 2.48
COG0628Predicted PurR-regulated permease PerMGeneral function prediction only [R] 1.65
COG4813Trehalose utilization proteinCarbohydrate transport and metabolism [G] 1.65
COG2041Molybdopterin-dependent catalytic subunit of periplasmic DMSO/TMAO and protein-methionine-sulfoxide reductasesEnergy production and conversion [C] 0.83
COG3915Uncharacterized conserved proteinFunction unknown [S] 0.83

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms95.87 %
UnclassifiedrootN/A4.13 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000559|F14TC_100169842All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1165Open in IMG/M
3300000571|JGI1358J11329_10222640All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium523Open in IMG/M
3300002886|JGI25612J43240_1001629All Organisms → cellular organisms → Bacteria2723Open in IMG/M
3300004114|Ga0062593_101232212All Organisms → cellular organisms → Bacteria787Open in IMG/M
3300005177|Ga0066690_10243534All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1205Open in IMG/M
3300005187|Ga0066675_10428817All Organisms → cellular organisms → Bacteria → Acidobacteria980Open in IMG/M
3300005345|Ga0070692_10010264All Organisms → cellular organisms → Bacteria4256Open in IMG/M
3300005406|Ga0070703_10351309All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium629Open in IMG/M
3300005436|Ga0070713_100043532All Organisms → cellular organisms → Bacteria → Acidobacteria3671Open in IMG/M
3300005438|Ga0070701_10090715All Organisms → cellular organisms → Bacteria1674Open in IMG/M
3300005440|Ga0070705_100062767All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2213Open in IMG/M
3300005440|Ga0070705_100669238All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium812Open in IMG/M
3300005444|Ga0070694_100210890All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1452Open in IMG/M
3300005444|Ga0070694_100736260All Organisms → cellular organisms → Bacteria804Open in IMG/M
3300005445|Ga0070708_100152645All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2149Open in IMG/M
3300005445|Ga0070708_100755220All Organisms → cellular organisms → Bacteria915Open in IMG/M
3300005454|Ga0066687_10208741All Organisms → cellular organisms → Bacteria → Acidobacteria1070Open in IMG/M
3300005468|Ga0070707_100041493All Organisms → cellular organisms → Bacteria4404Open in IMG/M
3300005468|Ga0070707_100426371All Organisms → cellular organisms → Bacteria1287Open in IMG/M
3300005468|Ga0070707_100537671All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1131Open in IMG/M
3300005471|Ga0070698_100011190All Organisms → cellular organisms → Bacteria9535Open in IMG/M
3300005471|Ga0070698_100818981All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium875Open in IMG/M
3300005526|Ga0073909_10484566All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium596Open in IMG/M
3300005529|Ga0070741_10333291Not Available1413Open in IMG/M
3300005536|Ga0070697_100560538All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1002Open in IMG/M
3300005545|Ga0070695_100208280All Organisms → cellular organisms → Bacteria1402Open in IMG/M
3300005545|Ga0070695_100498396All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium941Open in IMG/M
3300005545|Ga0070695_100581623All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium877Open in IMG/M
3300005549|Ga0070704_100107926All Organisms → cellular organisms → Bacteria2113Open in IMG/M
3300005549|Ga0070704_100370963All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1213Open in IMG/M
3300005615|Ga0070702_101873243All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_21502Open in IMG/M
3300006028|Ga0070717_10108584All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2364Open in IMG/M
3300006049|Ga0075417_10738264All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium507Open in IMG/M
3300006579|Ga0074054_11714859All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium594Open in IMG/M
3300006794|Ga0066658_10037747All Organisms → cellular organisms → Bacteria → Acidobacteria2007Open in IMG/M
3300006852|Ga0075433_11607447All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium560Open in IMG/M
3300006854|Ga0075425_100892013All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1017Open in IMG/M
3300009012|Ga0066710_102392865All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium766Open in IMG/M
3300009090|Ga0099827_10139155All Organisms → cellular organisms → Bacteria1976Open in IMG/M
3300009137|Ga0066709_100346435All Organisms → cellular organisms → Bacteria2039Open in IMG/M
3300009137|Ga0066709_101993760All Organisms → cellular organisms → Bacteria804Open in IMG/M
3300009143|Ga0099792_10414780All Organisms → cellular organisms → Bacteria827Open in IMG/M
3300009147|Ga0114129_10236174All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2459Open in IMG/M
3300009176|Ga0105242_10608206Not Available1057Open in IMG/M
3300010154|Ga0127503_11127107All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium535Open in IMG/M
3300010364|Ga0134066_10392585All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium527Open in IMG/M
3300010399|Ga0134127_13453775All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium517Open in IMG/M
3300010401|Ga0134121_12230255All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium585Open in IMG/M
3300010403|Ga0134123_10463779All Organisms → cellular organisms → Bacteria1181Open in IMG/M
3300011398|Ga0137348_1000786All Organisms → cellular organisms → Bacteria5000Open in IMG/M
3300011405|Ga0137340_1002840All Organisms → cellular organisms → Bacteria3228Open in IMG/M
3300011423|Ga0137436_1065427All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium939Open in IMG/M
3300011425|Ga0137441_1131091All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium619Open in IMG/M
3300011427|Ga0137448_1066116All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium938Open in IMG/M
3300012166|Ga0137350_1073395All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium682Open in IMG/M
3300012203|Ga0137399_10085281All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2408Open in IMG/M
3300012207|Ga0137381_10117784All Organisms → cellular organisms → Bacteria2265Open in IMG/M
3300012208|Ga0137376_10180801All Organisms → cellular organisms → Bacteria1821Open in IMG/M
3300012212|Ga0150985_111859941All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium506Open in IMG/M
3300012285|Ga0137370_10543125All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium714Open in IMG/M
3300012685|Ga0137397_11282637Not Available522Open in IMG/M
3300012922|Ga0137394_10476417All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1061Open in IMG/M
3300012944|Ga0137410_11288194All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium632Open in IMG/M
3300014865|Ga0180078_1027896All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium882Open in IMG/M
3300015245|Ga0137409_10556193All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium975Open in IMG/M
3300015248|Ga0180079_1041618All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium657Open in IMG/M
3300015371|Ga0132258_11771093All Organisms → cellular organisms → Bacteria → Acidobacteria1557Open in IMG/M
3300015371|Ga0132258_12329255Not Available1343Open in IMG/M
3300015372|Ga0132256_100489110All Organisms → cellular organisms → Bacteria1340Open in IMG/M
3300018053|Ga0184626_10316306All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium646Open in IMG/M
3300018071|Ga0184618_10271074All Organisms → cellular organisms → Bacteria → Acidobacteria720Open in IMG/M
3300018075|Ga0184632_10380965All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium596Open in IMG/M
3300018081|Ga0184625_10559936All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium567Open in IMG/M
3300018432|Ga0190275_11368901All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae784Open in IMG/M
3300018482|Ga0066669_10841723All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium816Open in IMG/M
3300019263|Ga0184647_1326646All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1168Open in IMG/M
3300020065|Ga0180113_1426578All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium796Open in IMG/M
3300021080|Ga0210382_10263011All Organisms → cellular organisms → Bacteria → Acidobacteria756Open in IMG/M
3300021363|Ga0193699_10002072All Organisms → cellular organisms → Bacteria → Proteobacteria7768Open in IMG/M
3300021951|Ga0222624_1445122All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium504Open in IMG/M
3300025910|Ga0207684_10304910All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1373Open in IMG/M
3300025910|Ga0207684_10482474All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1063Open in IMG/M
3300025917|Ga0207660_10572845All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium919Open in IMG/M
3300025922|Ga0207646_10343380All Organisms → cellular organisms → Bacteria1349Open in IMG/M
3300025922|Ga0207646_10623832All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium967Open in IMG/M
3300025928|Ga0207700_10846570All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium818Open in IMG/M
3300026075|Ga0207708_10056365All Organisms → cellular organisms → Bacteria2998Open in IMG/M
3300026118|Ga0207675_100371553All Organisms → cellular organisms → Bacteria1405Open in IMG/M
3300026285|Ga0209438_1004015All Organisms → cellular organisms → Bacteria4993Open in IMG/M
3300026312|Ga0209153_1048440All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1501Open in IMG/M
3300026325|Ga0209152_10015354All Organisms → cellular organisms → Bacteria → Acidobacteria2628Open in IMG/M
3300026331|Ga0209267_1125753All Organisms → cellular organisms → Bacteria1077Open in IMG/M
3300026542|Ga0209805_1002902All Organisms → cellular organisms → Bacteria9891Open in IMG/M
3300027513|Ga0208685_1003026All Organisms → cellular organisms → Bacteria5060Open in IMG/M
3300027835|Ga0209515_10018091All Organisms → cellular organisms → Bacteria → Proteobacteria6917Open in IMG/M
3300027873|Ga0209814_10371991All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium627Open in IMG/M
3300027873|Ga0209814_10569568All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium504Open in IMG/M
3300027882|Ga0209590_10428497All Organisms → cellular organisms → Bacteria855Open in IMG/M
3300030997|Ga0073997_10846264All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium615Open in IMG/M
3300031538|Ga0310888_10869978All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium561Open in IMG/M
3300031720|Ga0307469_10043852All Organisms → cellular organisms → Bacteria → Acidobacteria2745Open in IMG/M
3300031720|Ga0307469_10512902All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1054Open in IMG/M
3300031720|Ga0307469_12300755All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium525Open in IMG/M
3300031740|Ga0307468_100218765All Organisms → cellular organisms → Bacteria1307Open in IMG/M
3300031740|Ga0307468_100655622All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium868Open in IMG/M
3300031740|Ga0307468_101009544All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium733Open in IMG/M
3300031740|Ga0307468_101830303All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium576Open in IMG/M
3300031820|Ga0307473_10847551All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium656Open in IMG/M
3300032012|Ga0310902_10871021All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium618Open in IMG/M
3300032174|Ga0307470_10154917All Organisms → cellular organisms → Bacteria1407Open in IMG/M
3300032174|Ga0307470_11959827All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium500Open in IMG/M
3300032180|Ga0307471_100492929All Organisms → cellular organisms → Bacteria1372Open in IMG/M
3300032180|Ga0307471_102102402All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium710Open in IMG/M
3300032180|Ga0307471_102675127All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium633Open in IMG/M
3300032180|Ga0307471_103145483Not Available585Open in IMG/M
3300033004|Ga0335084_10610048All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1116Open in IMG/M
3300034090|Ga0326723_0159806All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium992Open in IMG/M
3300034176|Ga0364931_0254064All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium578Open in IMG/M
3300034417|Ga0364941_161295All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium569Open in IMG/M
3300034643|Ga0370545_018591All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1145Open in IMG/M
3300034643|Ga0370545_144150All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium546Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere23.97%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil11.57%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil9.09%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil7.44%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil6.61%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil4.96%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere4.96%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment3.31%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment3.31%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil3.31%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil2.48%
GroundwaterEnvironmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater1.65%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil1.65%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil1.65%
SedimentEnvironmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment1.65%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere1.65%
SoilEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil0.83%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.83%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil0.83%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.83%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.83%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.83%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.83%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.83%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil0.83%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere0.83%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.83%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.83%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.83%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000559Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemlyEnvironmentalOpen in IMG/M
3300000571Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW60B uncontaminated upgradient, 5.4 mEnvironmentalOpen in IMG/M
3300002886Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cmEnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300005177Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139EnvironmentalOpen in IMG/M
3300005187Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124EnvironmentalOpen in IMG/M
3300005345Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaGEnvironmentalOpen in IMG/M
3300005406Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaGEnvironmentalOpen in IMG/M
3300005436Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaGEnvironmentalOpen in IMG/M
3300005438Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaGEnvironmentalOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005444Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaGEnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005454Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136EnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300005526Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1EnvironmentalOpen in IMG/M
3300005529Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1EnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005545Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaGEnvironmentalOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005615Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaGEnvironmentalOpen in IMG/M
3300006028Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaGEnvironmentalOpen in IMG/M
3300006049Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1Host-AssociatedOpen in IMG/M
3300006579Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAB (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006794Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107EnvironmentalOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009143Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2EnvironmentalOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300010154Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010364Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300011398Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT600_2EnvironmentalOpen in IMG/M
3300011405Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT400_2EnvironmentalOpen in IMG/M
3300011423Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT119_2EnvironmentalOpen in IMG/M
3300011425Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT244_2EnvironmentalOpen in IMG/M
3300011427Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT418_2EnvironmentalOpen in IMG/M
3300012166Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT660_2EnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012207Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012285Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300014865Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT499_16_10DEnvironmentalOpen in IMG/M
3300015245Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015248Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT530_16_10DEnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300018053Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1EnvironmentalOpen in IMG/M
3300018071Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1EnvironmentalOpen in IMG/M
3300018075Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1EnvironmentalOpen in IMG/M
3300018081Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1EnvironmentalOpen in IMG/M
3300018432Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 TEnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300019263Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300020065Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT499_16_1Ra (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300021080Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redoEnvironmentalOpen in IMG/M
3300021363Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c2EnvironmentalOpen in IMG/M
3300021951Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025917Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025928Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026075Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026118Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026285Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026312Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120 (SPAdes)EnvironmentalOpen in IMG/M
3300026325Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)EnvironmentalOpen in IMG/M
3300026331Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)EnvironmentalOpen in IMG/M
3300026542Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)EnvironmentalOpen in IMG/M
3300027513Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890 (SPAdes)EnvironmentalOpen in IMG/M
3300027835Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW60B uncontaminated upgradient, 5.4 m (SPAdes)EnvironmentalOpen in IMG/M
3300027873Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300027882Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300030997Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-3B (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300031538Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300032012Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3EnvironmentalOpen in IMG/M
3300032174Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300033004Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4EnvironmentalOpen in IMG/M
3300034090Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00NEnvironmentalOpen in IMG/M
3300034176Sediment microbial communities from East River floodplain, Colorado, United States - 21_j17EnvironmentalOpen in IMG/M
3300034417Sediment microbial communities from East River floodplain, Colorado, United States - 17_s17EnvironmentalOpen in IMG/M
3300034643Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_120 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
F14TC_10016984223300000559SoilMRVPDSEIALPSSGLLIPGERERNTLTYRQPGSMGGPAFGSEIASPPSVLMEGTTIAEHEREGGGAPNTRKAR*
JGI1358J11329_1022264023300000571GroundwaterMDISPSTGLMIPGERERNTLTYRQPGSMGGPASGSDLEGPLSVLMDAVTIAEHQREGGGAPSTRKVR*
JGI25612J43240_100162933300002886Grasslands SoilMDNTSDARPSTGLMIPGERERNTLTYRRPGSMGGPGIGSDSGQPPSVLMDDVTIAEHQREGGGAPSTRRAR*
Ga0062593_10123221223300004114SoilMIPGERERNTLTHRQSGSMGGPASGSEIEGAAGALMDSTTVAEHQREGGGAPGTRKIR*
Ga0066690_1024353423300005177SoilMQPVRTTDLMMPSSGLMIPGEWERKTPTRRQPGSMGGPASGSDVGGVPSVLMDAVTISEHQREGGGAPSTRKVR*
Ga0066675_1042881723300005187SoilMDKIPIPSTGRMIPGERERNTLTYRQPGSMGGPEFGSEVIGPANPLMDAVTIAERQREGGGAPSTRTKPRS*
Ga0070692_1001026413300005345Corn, Switchgrass And Miscanthus RhizosphereTDAPCRMVSPWSMEQTIPSSGLMIPGERERNTLTHRLPGSIGGPEFGSDVGGTPGVLMDAVTIAEHQREGGGAPSTRRAS*
Ga0070703_1035130923300005406Corn, Switchgrass And Miscanthus RhizosphereMIPGERERNTLTHRLPGSIGGPEFGSDVGGTPSVLMDASTIAEHQREGGGAPRTRRAG
Ga0070713_10004353283300005436Corn, Switchgrass And Miscanthus RhizosphereLNDVCVLFGTDVLLPTVHDGVMEKSPSSGLMIPGERERNTLTYRQPGSIGGPEFGSEVISRANPLMDAVTIAEHQREGGGPPNTRRIR*
Ga0070701_1009071523300005438Corn, Switchgrass And Miscanthus RhizosphereMEQTIPSSGLMIPGERERNTLTHRLPGSIGGPEFGSDVGGTPGVLMDAVTIAEHQREGGGAPSTRRAS*
Ga0070705_10006276743300005440Corn, Switchgrass And Miscanthus RhizosphereMDNTSNARPSTGLMIPGERERNTLTYRQPGSIGGPEFGSDSGQPPSVLMDDVTIAEHQREGGGAPSTRRAR*
Ga0070705_10066923813300005440Corn, Switchgrass And Miscanthus RhizosphereMDNTSDARPSTGLMIPGERERNTLTYRQPGSIGGPEFGSDSGQPPSVLMDDVTIAEHQREGGGAPSTRKAR*
Ga0070694_10021089013300005444Corn, Switchgrass And Miscanthus RhizosphereLMIPGERERNTLTYRQPGSIGGPEFGSDSGQPPSVLMDDATIAEHQREGGGAPSTRKAR*
Ga0070694_10073626023300005444Corn, Switchgrass And Miscanthus RhizosphereMIPGERERNTLTHRQSGSMGGAPAGSEIEGAAGALMDSTTIAEHQREGGGAPTTRKIR*
Ga0070708_10015264553300005445Corn, Switchgrass And Miscanthus RhizosphereMIPGERERNTLTHRQSGSMGGAPAGSEIEGAAGALMDSTTIAEHQREGGGAPSTRKIR*
Ga0070708_10075522023300005445Corn, Switchgrass And Miscanthus RhizosphereMIPGERERNTLTYRQPGSMGGPASGSDLEGPLSVLMDAVTISEHQREGGGAPSTRKVR*
Ga0066687_1020874123300005454SoilMDKIPSTGRMIPGERERNTLTYRQPGSMGGPEFGSEVIGPANPLMDAVTIAERQREGGGAPSTRTKRQS*
Ga0070707_10004149323300005468Corn, Switchgrass And Miscanthus RhizosphereMDNTSNARPSTGLMIPGERERNTLTYRQPGSIGGPEFGSDSGQPPSVLMDDATIAEHQREGGGAPSTRRAR*
Ga0070707_10042637123300005468Corn, Switchgrass And Miscanthus RhizosphereMETTTHPPNPSTGLMIPGERERNTLTHRQPGSMGGPEFGSEIVGPPSVLMDDTTIAEHQREGGGAPSTRTTSD*
Ga0070707_10053767143300005468Corn, Switchgrass And Miscanthus RhizosphereMDITSDTRPSTGLMIPGERERNTLTYRQPGSVGGPEFGSDSGQPPSVLMDDATIAEHQREGGGAPSTRRVR*
Ga0070698_10001119073300005471Corn, Switchgrass And Miscanthus RhizosphereMDITSDTRPSTGLMIPGERERNTLTYRQPGSVGGPEFGSDSGQPPSVLMDDATIAEHQREGGGAPSTRKAR*
Ga0070698_10081898143300005471Corn, Switchgrass And Miscanthus RhizosphereRNTLTYRQPGSMGGPASGSDLEGPLSVLMDAVTISEHQREGGGAPSTRKAR*
Ga0073909_1048456623300005526Surface SoilMDTPPQSTGLMIPGERERNTLTYRQLGSMGGPASGSAVEGAPSVLMDATTIAEHQREGGGAPSTRKVR*
Ga0070741_1033329123300005529Surface SoilMIPGERERNTITYRQPGSIGGPEFGSEVAAPANPLMDAVTIAEREREGGGAPSTRTTR*
Ga0070697_10056053823300005536Corn, Switchgrass And Miscanthus RhizospherePSTGLMIPGERERNTLTHRQPGSMGGPEFGSEIVGPPSVLMDDTTIAEHQREGGGAPSTRTTSD*
Ga0070695_10020828033300005545Corn, Switchgrass And Miscanthus RhizosphereMVAPWSMEQTIPSSGLMIPGERERNTLTHRLPGSIGGPEFGSDVGGTPSVLMDAVTIAEHQREGGGAPRTRRAG*
Ga0070695_10049839633300005545Corn, Switchgrass And Miscanthus RhizosphereMDNTSNARPSTGLMIPGERERNTLTYRQPGSVGGPEFGSDSGQPPSVLMDDVTIAEHQREGGGAPSTRRAR*
Ga0070695_10058162313300005545Corn, Switchgrass And Miscanthus RhizosphereMDNTSDARPSTGLMIPGERERNTLTYRQPGSIGGPEFGSDSGQPPSVLMDDVTIAEHQREGGGAPSTRRAR*
Ga0070704_10010792623300005549Corn, Switchgrass And Miscanthus RhizosphereMVSPWSMEQTIPSSGLMIPGERERNTLTHRLPGSIGGPEFGSDVGGTPSVLMDAVTIAEHRREGGGAPSTRRAG*
Ga0070704_10037096323300005549Corn, Switchgrass And Miscanthus RhizosphereMDNTSDARPSTGLMIPGERERNTLTYRQPGSIGGPEFGSDSGQPPSVLMDDATIAEHQREGGGAPSTRRAR*
Ga0070702_10187324313300005615Corn, Switchgrass And Miscanthus RhizosphereNTLTHRLPGSIGGPEFGSDVGGTPGVLMDAVTIAEHQREGGGAPSTRRAS*
Ga0070717_1010858463300006028Corn, Switchgrass And Miscanthus RhizosphereLNDVGVLFRTDVLLLTVHDGLMEKSPSSGLMIPGERERNTLTYRQPGSIGGPEFGSEVISRANPLMDAVTIAEHQREGGGPPNTRRIR*
Ga0075417_1073826423300006049Populus RhizosphereAGRPNVDGMDSPSPSTGLMIPGERERNTLTRRVPGSIGGPASGSNVGGTPNKLMDDVTIAERQREGGGAPRTRKIA*
Ga0074054_1171485923300006579SoilMDIPQPSTGLMIPGERERNTLTYRQLGSMGGPASGSAVEGAPSVLMDATTIAEHQREGGGAPSTRKVR*
Ga0066658_1003774733300006794SoilMEKIIPSSGLMIPGEREPNTLTSRLPGSIGGPAFGSDVGGTPNVLMDDVTIAEHQRQGGGAPSTRRAR*
Ga0075433_1160744723300006852Populus RhizosphereMDITSGARPSTGLMIPGERERNTLTYRQPGSVGGPEFGSDSGQPPSVLMDDVTIAEHQREGGGAPSTRKAR*
Ga0075425_10089201323300006854Populus RhizosphereMETTTHPLDPSSGLMIPGERERNTLTHRQPGSMGGPEFGSEIVGPPSVLMDDTTIAEHQREGGGAPSTRTSD*
Ga0066710_10239286523300009012Grasslands SoilMDIPQPSTGLMIPGERERNTLTYRQLRSMGGPASGSAVEGAPSVLMDATTIAEHQREGGGAPSTRKVR
Ga0099827_1013915523300009090Vadose Zone SoilMDTTRPSTGLMIPGERERNTLTYRQPGSIGGPASGSDLEGPLSVLMDATTIAEHQREGGGAPSTRKVR*
Ga0066709_10034643533300009137Grasslands SoilMYIPQPSTGLMIPGERERNTLTYRQLGSMGGPASGSAVEGTPSVLMDATTIAEHQREGGGAPSTRKVR*
Ga0066709_10199376023300009137Grasslands SoilMIPGERERNTLTYRQSGSMGGPASGSELEGPPSVLMDDTTIAEHQREGGGAPSTRKVR*
Ga0099792_1041478013300009143Vadose Zone SoilERERNTLTYRQPGSMGGPEFGSEVVGPANPLMDAVTIAERQREGGGAPSTRTKRQS*
Ga0114129_1023617453300009147Populus RhizosphereMDITSDARPSTGLMIPGERERNTLTYRQPGSVGGPEFGSDSGQPPSVLMDDVTIAEHQREGGGAPSTRKAR*
Ga0105242_1060820623300009176Miscanthus RhizosphereMEQTIPSSGLMIPGERERNTLTHRLPGSIGGPEFGSDVGGTPSVQMDAVTIAEHQREGGGAPRTRRAG*
Ga0127503_1112710733300010154SoilLMIPGERERNTLTYRQLGSMGGPASGSAVEGVPSVLMDATTIAEHQREGGGAPSTRKVR*
Ga0134066_1039258523300010364Grasslands SoilMDIPQPSTGLMIPGERERNTLTYRQLGSMAGPASGSAVEGTPSVLMDATTIAEHQREGGGAPSTRKVR*
Ga0134127_1345377513300010399Terrestrial SoilMEQTIPSSGLMIPGERERNTLTHRLPGSIGGPEFGSDVGGTPSVLMDAVTIAEHRREGGGAPSTRRAS*
Ga0134121_1223025523300010401Terrestrial SoilSQPSTGLMIPGERERNTLTHRQSGSMGGPASGSEIEGAAGALMDSTTVAEHQREGGGAPGTRKIR*
Ga0134123_1046377913300010403Terrestrial SoilMEQTIPSSGLMIPGERERNTLTHRLPGSIGGPEFGSDVGGTPSVLMDAITIAEHQREGGGAPSTRRAG*
Ga0137348_100078613300011398SoilMDNTNSSTGLMIPGERERNTLTHRLPGSMGGPAFGSDVGGTPNKLMDDVTIAEHQREGGGAPRTRKVA*
Ga0137340_100284013300011405SoilNTNPSTGLMIPGERERNTLTHRLPGSMGGPAFGSDVGGTPNKLMDDVTIAEHQREGGGAPRTRKVA*
Ga0137436_106542713300011423SoilNPSTGLMIPGERERNTLTHRLPGSMGGPAFGSDVGGTPNKLMDDVTIAEHQREGGGAPRTRKVA*
Ga0137441_113109133300011425SoilGERERNTLTHRQPGSMGGSASGSDVGGTPNKLMDDVTIAEHQREGGGAPRTRKVA*
Ga0137448_106611613300011427SoilRPTVDGMDNTNPSTGLMIPGERERNTLTHRLPGSMGGAASGSDVGGTPNKLMDDVTIAERQREGGGAPGTRKVA*
Ga0137350_107339513300012166SoilMDNTNPSTGLMIPGERERNTLTHRLPGSMGGPAFGSDVGGTPNKLMDDVTIAEHQREGGGAPRTRKVA*
Ga0137399_1008528143300012203Vadose Zone SoilMIPGERERNTLTYRRPGSMGGPGIGSDSGQPPSVLMDDVTIAEHQREGGGAPSTRRAR*
Ga0137381_1011778433300012207Vadose Zone SoilMDIPQPSTGLMIPGERERNTLTYRQLGSMGGPASGSAVEGASSVLMDATTIAEHQREGGGAPSTRKVR*
Ga0137376_1018080133300012208Vadose Zone SoilMIPGERERNTLTYRQSGSMGGPASGSEVEGTPSVLMDATTIAERQREGGGAPSTRKVR*
Ga0150985_11185994123300012212Avena Fatua RhizosphereSKPAAGLMIPGARERNTLTYRQPGSMGGPAAGSDVGGIPSVLMDPTTIAEHQREGGGAPSTRKLR*
Ga0137370_1054312533300012285Vadose Zone SoilRSMDIPQPSTGLMIPGERERNTLTYRQLGSMGGPASGSAVEGTPSVLMDATTIAEHQREGGGAPSTRKVR*
Ga0137397_1128263723300012685Vadose Zone SoilMIPGERERNTLTYRQPGSMGGPAAGSNVGGTPNPLMDDATSEERRREGGGAPNT
Ga0137394_1047641723300012922Vadose Zone SoilMDNTNPSTGLMIPGERERNTLTYRRPGSMGGPASGSDVGGTPNALMDDVTIAERQREGGGAPSTRKVA*
Ga0137410_1128819413300012944Vadose Zone SoilMNEANLPSGRMIPGERERDTLTYRQPGSIGGPASGSDIVGATPGDLMEEATVLEHQREGGGAPSTRNAADDRRTP*
Ga0180078_102789633300014865SoilRERNTLTHRQPGSMGGSASGSDVGGTPNKLMDDVTIAEHQREGGGAPRTRKVA*
Ga0137409_1055619323300015245Vadose Zone SoilMDNTNPSTGLMIPGERERNTLTYRRPGSMGGPASGSDVGGTPNALMDDVTIAERQREGGGAPSTRKVP*
Ga0180079_104161833300015248SoilTGLMIPGERERNTLTRRLPGSMGGPASGSDVGGTPNKLMDDVTIAEHQREGGGAPRTRKVA*
Ga0132258_1177109313300015371Arabidopsis RhizosphereMIPGAREPNTLTYRQPGAMGGPASGSSLGGGHTPLMDAQTLDERRREGGGLRKRR*
Ga0132258_1232925533300015371Arabidopsis RhizospherePSTGLMIPGERERNTLTHRQPGSMGGPEFGSEIAGPPSVLMDDTTIAEHRREGGGAPGTRTSD*
Ga0132256_10048911023300015372Arabidopsis RhizosphereMEKTIPSSGLMIPGERERNTLTHRQPGSIGGPEFGSDVGGTPGVLMDAVTIAEHQREGGGAPSTRRAG*
Ga0184626_1031630613300018053Groundwater SedimentVQFETDMLFPTAYGDAMDTPNPSTGLMIPGERERNTLTYRQPGSMGGPASGSDVGGTPNALMDDVTIAEHQREGGGAPSTRKVA
Ga0184618_1027107423300018071Groundwater SedimentMDNTNPSTGLMIPGERERNTLTYRRPGSMGGPASGSDVGGTPNALMDDVTIAEHQREGGGAPSTRKVA
Ga0184632_1038096523300018075Groundwater SedimentGRMIPGERERNTLTYRQPGSMGGPASGSDVGGTPNALMDDATIAERQREGGGSPSTRKVAGCRATS
Ga0184625_1055993633300018081Groundwater SedimentLFPTAYRGAMDNPNPSTGLMIPGERERNTLTYRQLGSMGGPASGSAVEGALSVLMDATTIAEHQREGGGAPSTRKVR
Ga0190275_1136890123300018432SoilMIPGSRERNTLTYRQPGAMGGAASGASGITQGSSSMDAATIAEREREGGGGPEQRRRP
Ga0066669_1084172313300018482Grasslands SoilMDIPQPSTGLMIPGERERNTLTYRQLGSMGGPASGSAVEGTPSVLMDATTIAEHQREGGGAPSTRKVR
Ga0184647_132664643300019263Groundwater SedimentTGLMIPGERERNTLTYRQPGSMGGPASGSAVEGAQSVLMDATTIAEHQREGGGAPSTRKV
Ga0180113_142657813300020065Groundwater SedimentSSAERPTVDGMDNTNSSTGRMIPGERERNTLTRRLPGSMGGPASGSDVGGTPNKLMDDVTIAEHQREGGGAPRTRKVA
Ga0210382_1026301113300021080Groundwater SedimentMDNTNPSTGLMIPGERERNTLTYRRPGSMGGPASGSDVGGTPNALMDDVTIAEHQREGGGAPSTRKV
Ga0193699_1000207283300021363SoilMDNPYPSTGLMIPGERERNTLTYRRPGSMGGPASGSDVGGTPNVLMDDVTIAERQREGGGAPSTRKVA
Ga0222624_144512213300021951Groundwater SedimentERPTLVVVDSTDASTGLMIPGERERNTLTYRRPGSIGGPASGSDVGVTPNKLMDDVTVAEHQREGGGAPRTRKVA
Ga0207684_1030491023300025910Corn, Switchgrass And Miscanthus RhizosphereMIPGERERNTLTHRQSGSMGGPASGSEIEGAAGALMDSTTVAEHQREGGGAPGTRKIR
Ga0207684_1048247433300025910Corn, Switchgrass And Miscanthus RhizosphereMDNTSNARPSTGLMIPGERERNTLTYRQPGSIGGPEFGSDSGQPPSVLMDDVTIAEHQREGGGAPSTRRAR
Ga0207660_1057284523300025917Corn RhizosphereMIPGERERNTLTHRLPGSIGGPEFGSDVGGTPGVLMDAVTIAEHQREGGGAPSTRRAS
Ga0207646_1034338023300025922Corn, Switchgrass And Miscanthus RhizosphereMETTTHPPNPSTGLMIPGERERNTLTHRQPGSMGGPEFGSEIVGPPSVLMDDTTIAEHQREGGGAPSTRTTSD
Ga0207646_1062383243300025922Corn, Switchgrass And Miscanthus RhizosphereMDITSDTRPSTGLMIPGERERNTLTYRQPGSVGGPEFGSDSGQPPSVLMDDATIAEHQREGGGAPSTRKAR
Ga0207700_1084657013300025928Corn, Switchgrass And Miscanthus RhizosphereLLLTVHDGVMEKSPSSGLMIPGERERNTLTYRQPGSIGGPEFGSEVISRANPLMDAVTIAEHQREGGGPPNTRRIR
Ga0207708_1005636533300026075Corn, Switchgrass And Miscanthus RhizosphereMVAPWSMEQTIPSSGLMIPGERERNTLTHRLPGSIGGPEFGSDVGGTPSVLMDAVTIAEHQREGGGAPSTRRAG
Ga0207675_10037155343300026118Switchgrass RhizosphereLMIPGERERNTLTHRLPGSIGGPEFGSDVGGTPGVLMDAVTIAEHQREGGGAPSTRRAS
Ga0209438_100401553300026285Grasslands SoilMDNTSDARPSTGLMIPGERERNTLTYRRPGSMGGPGIGSDSGQPPSVLMDDVTIAEHQREGGGAPSTRRAR
Ga0209153_104844023300026312SoilMMPSSGLMIPGEWERKTPTRRQPGSMGGPASGSDVGGVPSVLMDAVTISEHQREGGGAPSTRKVR
Ga0209152_1001535423300026325SoilMEKIIPSSGLMIPGEREPNTLTSRLPGSIGGPAFGSDVGGTPNVLMDDVTIAEHQREGGGAPSTRRAR
Ga0209267_112575323300026331SoilMQPVRTTDLMMPSSGLMIPGEWERKTPTRRQPGSMGGPASGSDVGGVPSVLMDAVTISEHQREGGGAPS
Ga0209805_100290233300026542SoilMQPVRTTDLMMPSSGLMIPGEWERKTPTRRQPGSMGGPASGSDVGGVPSVLMDAVTISEHQREGGGAPSTRKVR
Ga0208685_100302613300027513SoilNSSTGLMIPGERERNTLTHRLPGSMGGPAFGSDVGGTPNKLMDDVTIAEHQREGGGAPRTRKVA
Ga0209515_1001809133300027835GroundwaterMDISPSTGLMIPGERERNTLTYRQPGSMGGPASGSDLEGPLSVLMDAVTIAEHQREGGGAPSTRKVR
Ga0209814_1037199133300027873Populus RhizosphereMDNTSDARPSTGLMIPGERERNTLTYRQPGSIGGPEFGSDSGQPPSVLMDDATIAEHQREGGGAPSTRRAR
Ga0209814_1056956813300027873Populus RhizospherePNVDGMDSPSPSTGLMIPGERERNTLTRRVPGSIGGPASGSNVGGTPNKLMDDVTIAERQREGGGAPRTRKIA
Ga0209590_1042849713300027882Vadose Zone SoilMDTTRPSTGLMIPGERERNTLTYRQPGSIGGPASGSDLEGPLSVLMDATTIAEHQREGGGAPSTRKAR
Ga0073997_1084626433300030997SoilNTLTHRRPGSIGGPASGSDVGVTPTKLMDDVTIAERQREGGGAPRTRRVT
Ga0310888_1086997823300031538SoilMVPPWGMEKTIPSSGLMIPGERERNTLTHRLPGSIGGPEFGSDVGGTPAVLMDAVTIAEHQREGGGAPSTRRAG
Ga0307469_1004385263300031720Hardwood Forest SoilMDNTSDARPSTGLMIPGERERNTLTYRQPGSIGGPEFGSDSGQPPSVLMDDVTIAEHQREGGGAPSTRRVR
Ga0307469_1051290213300031720Hardwood Forest SoilLARQGAAAPETKMTQPSSGLMIPGERERNTLTSRQPGSMGGPASGSDVGGVPSVLMDATTIAEHQREGGGAPSSRKGR
Ga0307469_1230075523300031720Hardwood Forest SoilMDNTSDARPSTGLMIPGERERNTLTYRQPGSIGGPEFGSDSGQPPSVLMDDVTIAEHQREGGGAPSTRRAR
Ga0307468_10021876513300031740Hardwood Forest SoilMEKTIPSSGLMIPGERERNTLTHRLPGSIGGPEFGSDVGGTPAVLMDAVTIAEHQREGGGAPSTRRAG
Ga0307468_10065562213300031740Hardwood Forest SoilMDNTSDARPSTGLMIPGERERNTLTYRQPGSIGGPEFGSDSGQPPSVLMDDVTIAEHQREGGG
Ga0307468_10100954423300031740Hardwood Forest SoilMEKTSDPAPSTGLMIPGERERNTLTHRQPGSMGGAEFGWDSGQPPSVLMDDVTIAEHQREGGGAPSTRKVR
Ga0307468_10183030323300031740Hardwood Forest SoilMPQPSSGLMIPGERERNTLTYRQPGSMGGPASGSDVGGVPSVLMDPTTIAEHQREGGGAPSTRKVR
Ga0307473_1084755123300031820Hardwood Forest SoilMDNANPSTGLMIPGERERNTLTYRQPGSMGGPASGSDVGGVPSVLMDPTTIAEHQREGGGAPSTRKVR
Ga0310902_1087102123300032012SoilMEQTIPSSGLMIPGERERNTLTHRLPGSIGGPEFGSDVGGTPGVLMDAVTIAEHQREGGGAPSTRRAS
Ga0307470_1015491733300032174Hardwood Forest SoilMEKTIPSSGLMIPGERERNTLTHRLPGSIGGPEFGSDVGGTPSVLMDAVTIAEHQREGGGAPSTRRAG
Ga0307470_1195982713300032174Hardwood Forest SoilERNTLTYRQPGSIGGPEFGSDSGQPPSVLMDDVTIAEHQREGGGAPSTRRAR
Ga0307471_10049292923300032180Hardwood Forest SoilMIPGERERNTLTYRQPGSMGGPASGSEVPGASVLMDAVTIAEHQREGGGAPRTRKQR
Ga0307471_10210240213300032180Hardwood Forest SoilRERNTLTYRQPGSIGGPEFGSDSGQPPSVLMDDVTIAEHQREGGGAPSTRRAR
Ga0307471_10267512723300032180Hardwood Forest SoilMAPPWGMEKTIPSSGLMIPGERERNTLTHRLPGSIGGPEFGSDVGGTPSVLMDAVTIAEHQREGGGAPSTRQAG
Ga0307471_10314548323300032180Hardwood Forest SoilMIPGARERNTLTYRQPGSMSGAAAGSDVGGTPNALMDDATIEERRREGGGAPNTRKVA
Ga0335084_1061004833300033004SoilMEKLPSSGLMIPGERERNTLTYRQPGSIGGPEFGSEITGPANPLMDAVTIAEHQREGGGAPSTRKTR
Ga0326723_0159806_809_9853300034090Peat SoilMIPGARERNTLTYRQPGSMGGPASGSTVEGAQSVLMDATTIAEHQREGGGAPSTRKVR
Ga0364931_0254064_29_2053300034176SedimentMIPGERERNTLTHRLPGSMGGPAFGSDVGGTPNKLMDDVTIAEHQREGGGAPRTRKVA
Ga0364941_161295_36_2423300034417SedimentMDTPQQSSGLMIPGERERNTLTYRQLGSMGGPASGSAVEGALSVLMDATTIAEHQREGGGAPSTRKVR
Ga0370545_018591_3_1703300034643SoilGERERNTLTYRQLGSMGGPASGSAVEGVPSVLMDATTIAEHQREGGGAPSTRKVR
Ga0370545_144150_21_2243300034643SoilMDDNPSTGLMIPGERERNTLTYRRPGSIGGPASGSDLGVTPNKLMDDVTIAEHQREGGGATSTRKVA

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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