Metagenome / Metatranscriptome Family F072213

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F072213
Family Type	Metagenome / Metatranscriptome
Number of Sequences	121
Average Sequence Length	99 residues
Representative Sequence	SEVSLARAVAGLEQKLASVRSTQRRLTEENAKLREQLRAAQESLAQAQERAAADPAAVRLDSAEIRLLERLLSPLRDKGTRQEEAGAG
Number of Associated Samples	104
Number of Associated Scaffolds	121

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.85 %
% of genes near scaffold ends (potentially truncated)	94.21 %
% of genes from short scaffolds (< 2000 bps)	92.56 %
Associated GOLD sequencing projects	101
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (51.240 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (19.008 % of family members)
Environment Ontology (ENVO)	Unclassified (24.793 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.413 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Mixed	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 81.82% β-sheet: 0.00% Coil/Unstructured: 18.18%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 121 Family Scaffolds
PF02653	BPD_transp_2	55.37
PF00180	Iso_dh	4.13
PF00588	SpoU_methylase	0.83
PF02894	GFO_IDH_MocA_C	0.83
PF10226	CCDC85	0.83
PF00005	ABC_tran	0.83

COG ID	Name	Functional Category	% Frequency in 121 Family Scaffolds
COG0219	tRNA(Leu) C34 or U34 (ribose-2'-O)-methylase TrmL, contains SPOUT domain	Translation, ribosomal structure and biogenesis [J]	0.83
COG0565	tRNA C32,U32 (ribose-2'-O)-methylase TrmJ or a related methyltransferase	Translation, ribosomal structure and biogenesis [J]	0.83
COG0566	tRNA G18 (ribose-2'-O)-methylase SpoU	Translation, ribosomal structure and biogenesis [J]	0.83
COG0673	Predicted dehydrogenase	General function prediction only [R]	0.83

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	52.07 %
Unclassified	root	N/A	47.93 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	52.07 %
Unclassified	root	N/A	47.93 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	51.24 %
Unclassified	root	N/A	47.93 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.93 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	14.88 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	9.92 %
Synergistetes	phylum	All Organisms → cellular organisms → Bacteria → Synergistetes	0.83 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.93 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	14.05 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3.31 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	1.65 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.65 %
Synergistia	class	All Organisms → cellular organisms → Bacteria → Synergistetes → Synergistia	0.83 %
Stenosarchaea group	clade	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.93 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	9.92 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3.31 %
unclassified Actinobacteria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria	2.48 %
Coriobacteriia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Coriobacteriia	1.65 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.65 %
Synergistales	order	All Organisms → cellular organisms → Bacteria → Synergistetes → Synergistia → Synergistales	0.83 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.83 %
Epsilonproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Epsilonproteobacteria	0.83 %
Halobacteria	class	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.93 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	5.79 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	4.13 %
Actinobacteria bacterium 13_2_20CM_2_66_6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_2_20CM_2_66_6	2.48 %
Eggerthellales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Coriobacteriia → Eggerthellales	1.65 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.65 %
Synergistaceae	family	All Organisms → cellular organisms → Bacteria → Synergistetes → Synergistia → Synergistales → Synergistaceae	0.83 %
Haloferacales	order	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales	0.83 %
Campylobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Epsilonproteobacteria → Campylobacterales	0.83 %
Desulfobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales	0.83 %
Alcaligenaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae	0.83 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.93 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	5.79 %
unclassified Streptosporangiales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → unclassified Streptosporangiales	4.13 %
Actinobacteria bacterium 13_2_20CM_2_66_6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_2_20CM_2_66_6	2.48 %
Eggerthellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Coriobacteriia → Eggerthellales → Eggerthellaceae	1.65 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.65 %
Halorubraceae	family	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales → Halorubraceae	0.83 %
Desulfobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	0.83 %
Acidovorax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Acidovorax	0.83 %
Achromobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Achromobacter	0.83 %
Aminomonas	genus	All Organisms → cellular organisms → Bacteria → Synergistetes → Synergistia → Synergistales → Synergistaceae → Aminomonas	0.83 %
Helicobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Epsilonproteobacteria → Campylobacterales → Helicobacteraceae	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.93 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	5.79 %
Streptosporangiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → unclassified Streptosporangiales → Streptosporangiales bacterium	4.13 %
Actinobacteria bacterium 13_2_20CM_2_66_6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_2_20CM_2_66_6	2.48 %
Eggerthella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Coriobacteriia → Eggerthellales → Eggerthellaceae → Eggerthella	1.65 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	1.65 %
unclassified Acidovorax	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Acidovorax → unclassified Acidovorax	0.83 %
Desulfobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfobacter	0.83 %
Halorubrum	genus	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales → Halorubraceae → Halorubrum	0.83 %
Achromobacter xylosoxidans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Achromobacter → Achromobacter xylosoxidans	0.83 %
Aminomonas paucivorans	species	All Organisms → cellular organisms → Bacteria → Synergistetes → Synergistia → Synergistales → Synergistaceae → Aminomonas → Aminomonas paucivorans	0.83 %
Helicobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Epsilonproteobacteria → Campylobacterales → Helicobacteraceae → Helicobacter	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.93 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	5.79 %
Streptosporangiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → unclassified Streptosporangiales → Streptosporangiales bacterium	4.13 %
Actinobacteria bacterium 13_2_20CM_2_66_6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_2_20CM_2_66_6	2.48 %
unclassified Eggerthella	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Coriobacteriia → Eggerthellales → Eggerthellaceae → Eggerthella → unclassified Eggerthella	1.65 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	1.65 %
Acidovorax sp. JS42	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Acidovorax → unclassified Acidovorax → Acidovorax sp. JS42	0.83 %
Desulfobacter postgatei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfobacter → Desulfobacter postgatei	0.83 %
Helicobacter pylori	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Epsilonproteobacteria → Campylobacterales → Helicobacteraceae → Helicobacter → Helicobacter pylori	0.83 %
Halorubrum coriense	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales → Halorubraceae → Halorubrum → Halorubrum coriense	0.83 %
Achromobacter xylosoxidans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Achromobacter → Achromobacter xylosoxidans	0.83 %
Aminomonas paucivorans	species	All Organisms → cellular organisms → Bacteria → Synergistetes → Synergistia → Synergistales → Synergistaceae → Aminomonas → Aminomonas paucivorans	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.93 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	5.79 %
Streptosporangiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → unclassified Streptosporangiales → Streptosporangiales bacterium	4.13 %
Actinobacteria bacterium 13_2_20CM_2_66_6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_2_20CM_2_66_6	2.48 %
Eggerthella sp. HGA1	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Coriobacteriia → Eggerthellales → Eggerthellaceae → Eggerthella → unclassified Eggerthella → Eggerthella sp. HGA1	1.65 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	1.65 %
Acidovorax sp. JS42	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Acidovorax → unclassified Acidovorax → Acidovorax sp. JS42	0.83 %
Desulfobacter postgatei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfobacter → Desulfobacter postgatei	0.83 %
Helicobacter pylori	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Epsilonproteobacteria → Campylobacterales → Helicobacteraceae → Helicobacter → Helicobacter pylori	0.83 %
Halorubrum coriense	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales → Halorubraceae → Halorubrum → Halorubrum coriense	0.83 %
Achromobacter xylosoxidans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Achromobacter → Achromobacter xylosoxidans	0.83 %
Aminomonas paucivorans	species	All Organisms → cellular organisms → Bacteria → Synergistetes → Synergistia → Synergistales → Synergistaceae → Aminomonas → Aminomonas paucivorans	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_105667050	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Acidovorax → unclassified Acidovorax → Acidovorax sp. JS42	653	Open in IMG/M
3300000956\|JGI10216J12902_107312014	All Organisms → cellular organisms → Bacteria	1337	Open in IMG/M
3300005164\|Ga0066815_10035215	All Organisms → cellular organisms → Bacteria	772	Open in IMG/M
3300005166\|Ga0066674_10455792	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	583	Open in IMG/M
3300005168\|Ga0066809_10055116	All Organisms → cellular organisms → Bacteria	899	Open in IMG/M
3300005332\|Ga0066388_105356851	All Organisms → cellular organisms → Bacteria	650	Open in IMG/M
3300005332\|Ga0066388_105438819	All Organisms → cellular organisms → Bacteria → Proteobacteria	645	Open in IMG/M
3300005332\|Ga0066388_106181304	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Coriobacteriia → Eggerthellales → Eggerthellaceae → Eggerthella → unclassified Eggerthella → Eggerthella sp. HGA1	604	Open in IMG/M
3300005332\|Ga0066388_107431947	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Coriobacteriia → Eggerthellales → Eggerthellaceae → Eggerthella → unclassified Eggerthella → Eggerthella sp. HGA1	550	Open in IMG/M
3300005334\|Ga0068869_101441169	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Epsilonproteobacteria → Campylobacterales → Helicobacteraceae → Helicobacter → Helicobacter pylori	610	Open in IMG/M
3300005338\|Ga0068868_101835189	All Organisms → cellular organisms → Bacteria → Synergistetes → Synergistia → Synergistales → Synergistaceae → Aminomonas → Aminomonas paucivorans	573	Open in IMG/M
3300005355\|Ga0070671_100975793	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	742	Open in IMG/M
3300005434\|Ga0070709_10791550	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales → Halorubraceae → Halorubrum → Halorubrum coriense	743	Open in IMG/M
3300005437\|Ga0070710_10476353	All Organisms → cellular organisms → Bacteria	850	Open in IMG/M
3300005457\|Ga0070662_101059445	All Organisms → cellular organisms → Bacteria	695	Open in IMG/M
3300005545\|Ga0070695_101474794	All Organisms → cellular organisms → Bacteria → Proteobacteria	566	Open in IMG/M
3300005547\|Ga0070693_100268352	All Organisms → cellular organisms → Bacteria	1138	Open in IMG/M
3300005598\|Ga0066706_10641195	All Organisms → cellular organisms → Bacteria	843	Open in IMG/M
3300005598\|Ga0066706_11412114	Not Available	525	Open in IMG/M
3300005614\|Ga0068856_102085940	Not Available	577	Open in IMG/M
3300005618\|Ga0068864_101584772	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	659	Open in IMG/M
3300005764\|Ga0066903_106014787	All Organisms → cellular organisms → Bacteria → Proteobacteria	636	Open in IMG/M
3300005764\|Ga0066903_106450905	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfobacter → Desulfobacter postgatei	612	Open in IMG/M
3300006059\|Ga0075017_100064766	All Organisms → cellular organisms → Bacteria	2483	Open in IMG/M
3300006755\|Ga0079222_11227435	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Achromobacter → Achromobacter xylosoxidans	674	Open in IMG/M
3300006854\|Ga0075425_100443310	All Organisms → cellular organisms → Bacteria	1495	Open in IMG/M
3300006880\|Ga0075429_100759483	All Organisms → cellular organisms → Bacteria	849	Open in IMG/M
3300006954\|Ga0079219_10666238	All Organisms → cellular organisms → Bacteria → Proteobacteria	781	Open in IMG/M
3300009093\|Ga0105240_12087727	Not Available	588	Open in IMG/M
3300009137\|Ga0066709_103855415	Not Available	545	Open in IMG/M
3300009792\|Ga0126374_11534798	Not Available	548	Open in IMG/M
3300010043\|Ga0126380_10683816	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_2_20CM_2_66_6	822	Open in IMG/M
3300010046\|Ga0126384_10136056	Not Available	1872	Open in IMG/M
3300010046\|Ga0126384_10936560	Not Available	785	Open in IMG/M
3300010154\|Ga0127503_11019852	All Organisms → cellular organisms → Bacteria	831	Open in IMG/M
3300010358\|Ga0126370_10383709	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → unclassified Streptosporangiales → Streptosporangiales bacterium	1148	Open in IMG/M
3300010358\|Ga0126370_11729045	Not Available	603	Open in IMG/M
3300010360\|Ga0126372_12501561	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	567	Open in IMG/M
3300010360\|Ga0126372_12883419	Not Available	533	Open in IMG/M
3300010361\|Ga0126378_10793024	Not Available	1057	Open in IMG/M
3300010361\|Ga0126378_11512580	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_2_20CM_2_66_6	761	Open in IMG/M
3300010362\|Ga0126377_10985599	All Organisms → cellular organisms → Bacteria	909	Open in IMG/M
3300010366\|Ga0126379_11488048	All Organisms → cellular organisms → Bacteria	783	Open in IMG/M
3300010376\|Ga0126381_101290513	Not Available	1055	Open in IMG/M
3300010396\|Ga0134126_11384681	Not Available	777	Open in IMG/M
3300010398\|Ga0126383_12710727	Not Available	578	Open in IMG/M
3300010880\|Ga0126350_11906143	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1597	Open in IMG/M
3300011107\|Ga0151490_1772218	Not Available	589	Open in IMG/M
3300012198\|Ga0137364_11015558	Not Available	627	Open in IMG/M
3300012206\|Ga0137380_10927696	Not Available	747	Open in IMG/M
3300012207\|Ga0137381_10514718	Not Available	1044	Open in IMG/M
3300012930\|Ga0137407_11233302	Not Available	710	Open in IMG/M
3300012960\|Ga0164301_10467068	Not Available	902	Open in IMG/M
3300012971\|Ga0126369_11664274	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	728	Open in IMG/M
3300013308\|Ga0157375_11205260	All Organisms → cellular organisms → Bacteria	888	Open in IMG/M
3300016371\|Ga0182034_10445138	Not Available	1071	Open in IMG/M
3300017939\|Ga0187775_10299230	Not Available	634	Open in IMG/M
3300017947\|Ga0187785_10049413	All Organisms → cellular organisms → Bacteria	1575	Open in IMG/M
3300017947\|Ga0187785_10239113	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_2_20CM_2_66_6	809	Open in IMG/M
3300017966\|Ga0187776_11254347	Not Available	558	Open in IMG/M
3300018029\|Ga0187787_10106648	All Organisms → cellular organisms → Bacteria	905	Open in IMG/M
3300018058\|Ga0187766_10275998	Not Available	1082	Open in IMG/M
3300018089\|Ga0187774_10806402	Not Available	634	Open in IMG/M
3300021420\|Ga0210394_10960306	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	742	Open in IMG/M
3300022756\|Ga0222622_11062443	Not Available	595	Open in IMG/M
3300025915\|Ga0207693_11244602	Not Available	559	Open in IMG/M
3300025928\|Ga0207700_12032075	Not Available	502	Open in IMG/M
3300025928\|Ga0207700_12037123	Not Available	501	Open in IMG/M
3300025939\|Ga0207665_10664603	All Organisms → cellular organisms → Bacteria	817	Open in IMG/M
3300026095\|Ga0207676_10344233	Not Available	1377	Open in IMG/M
3300026116\|Ga0207674_11933344	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	556	Open in IMG/M
3300026557\|Ga0179587_10674274	All Organisms → cellular organisms → Bacteria	681	Open in IMG/M
3300027787\|Ga0209074_10254903	Not Available	683	Open in IMG/M
3300027821\|Ga0209811_10180820	All Organisms → cellular organisms → Bacteria	792	Open in IMG/M
3300028811\|Ga0307292_10402456	Not Available	582	Open in IMG/M
3300028814\|Ga0307302_10156274	Not Available	1106	Open in IMG/M
3300028884\|Ga0307308_10294106	All Organisms → cellular organisms → Bacteria	778	Open in IMG/M
3300031170\|Ga0307498_10036738	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → unclassified Streptosporangiales → Streptosporangiales bacterium	1246	Open in IMG/M
3300031543\|Ga0318516_10373345	Not Available	822	Open in IMG/M
3300031544\|Ga0318534_10126276	Not Available	1471	Open in IMG/M
3300031670\|Ga0307374_10179250	Not Available	1567	Open in IMG/M
3300031681\|Ga0318572_10608027	All Organisms → cellular organisms → Bacteria	651	Open in IMG/M
3300031682\|Ga0318560_10209349	Not Available	1043	Open in IMG/M
3300031723\|Ga0318493_10199814	Not Available	1054	Open in IMG/M
3300031744\|Ga0306918_10415422	All Organisms → cellular organisms → Bacteria	1049	Open in IMG/M
3300031747\|Ga0318502_10028752	All Organisms → cellular organisms → Bacteria	2785	Open in IMG/M
3300031770\|Ga0318521_10324152	Not Available	910	Open in IMG/M
3300031794\|Ga0318503_10111423	Not Available	873	Open in IMG/M
3300031799\|Ga0318565_10101776	Not Available	1378	Open in IMG/M
3300031821\|Ga0318567_10198803	Not Available	1119	Open in IMG/M
3300031835\|Ga0318517_10124143	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → unclassified Streptosporangiales → Streptosporangiales bacterium	1144	Open in IMG/M
3300031860\|Ga0318495_10067859	Not Available	1588	Open in IMG/M
3300031860\|Ga0318495_10330071	All Organisms → cellular organisms → Bacteria	677	Open in IMG/M
3300031879\|Ga0306919_10616575	Not Available	837	Open in IMG/M
3300031893\|Ga0318536_10355146	All Organisms → cellular organisms → Bacteria	742	Open in IMG/M
3300031893\|Ga0318536_10554063	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	576	Open in IMG/M
3300031910\|Ga0306923_10233469	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2104	Open in IMG/M
3300031945\|Ga0310913_11249109	Not Available	516	Open in IMG/M
3300031954\|Ga0306926_10682725	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → unclassified Streptosporangiales → Streptosporangiales bacterium	1247	Open in IMG/M
3300032035\|Ga0310911_10380600	All Organisms → cellular organisms → Bacteria	816	Open in IMG/M
3300032065\|Ga0318513_10572045	Not Available	553	Open in IMG/M
3300032067\|Ga0318524_10285871	All Organisms → cellular organisms → Bacteria	852	Open in IMG/M
3300032068\|Ga0318553_10318087	Not Available	814	Open in IMG/M
3300032076\|Ga0306924_10086470	All Organisms → cellular organisms → Bacteria	3523	Open in IMG/M
3300032076\|Ga0306924_10803323	Not Available	1048	Open in IMG/M
3300032076\|Ga0306924_12614285	Not Available	503	Open in IMG/M
3300032174\|Ga0307470_11250058	Not Available	606	Open in IMG/M
3300032205\|Ga0307472_101329433	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	693	Open in IMG/M
3300032770\|Ga0335085_10257683	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2092	Open in IMG/M
3300032782\|Ga0335082_10388528	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → unclassified Streptosporangiales → Streptosporangiales bacterium	1260	Open in IMG/M
3300032782\|Ga0335082_11643624	Not Available	516	Open in IMG/M
3300032783\|Ga0335079_12162606	Not Available	532	Open in IMG/M
3300033158\|Ga0335077_10710072	Not Available	1034	Open in IMG/M
3300033289\|Ga0310914_10735819	Not Available	883	Open in IMG/M
3300033290\|Ga0318519_10383021	All Organisms → cellular organisms → Bacteria	835	Open in IMG/M
3300034818\|Ga0373950_0010792	Not Available	1483	Open in IMG/M
3300034819\|Ga0373958_0067294	All Organisms → cellular organisms → Bacteria	788	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	88.43%
Host-Associated	Host-Associated	11.57%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	85.95%
Plants	Host-Associated → Plants	11.57%
Aquatic	Environmental → Aquatic	2.48%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	85.95%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.61%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.96%
Sediment	Environmental → Aquatic → Sediment	1.65%
Freshwater	Environmental → Aquatic → Freshwater	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	62.81%
Loam	Environmental → Terrestrial → Soil → Loam	12.40%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	9.92%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.31%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.31%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.65%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.83%
Clay	Environmental → Terrestrial → Soil → Clay	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	27.27%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	27.27%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	9.92%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.61%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.79%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.31%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.31%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.48%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.65%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.83%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	19.01%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	13.22%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.61%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.61%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	5.79%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	5.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.13%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.13%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.13%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	4.13%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.48%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.48%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.65%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.65%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.65%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.65%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.65%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.65%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	1.65%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.83%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.83%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.83%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.83%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.83%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	0.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.83%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300005164	Soil and rhizosphere microbial communities from Laval, Canada - mgLAC	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005168	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011107	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAC (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300017939	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_10_MG	Environmental	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300018029	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP06_20_MG	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018089	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MG	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027787	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)	Environmental	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031670	Soil microbial communities from Risofladan, Vaasa, Finland - OX-3	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M
3300034818	Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3	Host-Associated	Open in IMG/M
3300034819	Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_1	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1056670501	3300000364	Soil	RLSTLPVQGPEPVEDAGPGERADSDVSLARAVAGLEQKLASVRSNQRRLTEENAQLREQLRAAQESLTQAQERAAAAPAAVRLDSAEIRLLERLLSPLRDKGTRQEEAGAG*
JGI10216J12902_1073120143	3300000956	Soil	EDAVPGPAAGGGEPTLARTVAGLEQKLASVKSRQRRLTEENAKLREQLRAAQESLAQAQERTAAERIAGRLDSAEIELLERLLSPLRDKGSRPGEAGAG*
Ga0066815_100352151	3300005164	Soil	LLLQVVQRLSSLPVEGSEPAEDAGPGEGADSDASLARAVAGLEQKLASVRSTQQRLSEENAKLREQLRAAQESLAQAQERAAADPAAVRLDSAEIRLLERLLSPLRDKGARQEEAGAG*
Ga0066674_104557921	3300005166	Soil	TYRITLVKAALAPARPEPALPRGGNGGACEAAPAGTEDFDYDELARRLLLQVVQRLGAEPGPAEDAVPGPAAGGGEPALARTAANLEQKLASVRSRQRRLTEENTKLREQLRAAQESLAQAQERAGAERIAERLDSAEIELLERLLSPLRDKGSRPEETGAG*
Ga0066809_100551162	3300005168	Soil	LEHKLASVRSKQRRLTEENAKLREQLRAAQESLAQAQERAGAERIAGRLDSAEVSLLERLLSPLRDKGTRQEEAGAG*
Ga0066388_1053568512	3300005332	Tropical Forest Soil	RSTQQRLSEENTKLREQLRAAQESLAQAQERAAADPAAVRLDSAEIRLLERLLSPLRDKEARQEEAGAG*
Ga0066388_1054388192	3300005332	Tropical Forest Soil	RSTQQRLSEENTKLREQLRAAQESLAQAQERAAADPAAVRLDSAEIRLLERLLSPLRDKGARQEEAGAG*
Ga0066388_1061813041	3300005332	Tropical Forest Soil	RQRRLTEENAKLREQLRAAQESLAQAQERAAADPGAVRLDSAEIRLLERLLSPLRDKGTRQEEAGAG*
Ga0066388_1074319471	3300005332	Tropical Forest Soil	RSKQARLTEENARLRDQLRAAQESLAQAEERASAAQASARLDSAEATLLERLLSPLRDQATRQEETGTG*
Ga0068869_1014411691	3300005334	Miscanthus Rhizosphere	DSEVSLARAVAGLEQKLASVRSTQRRLTEENAELREQLRAAQESLAQAQERAAADPAAVRLDSAEIRLLERLLSPLRDKGTRPEEAGAG*
Ga0068868_1018351891	3300005338	Miscanthus Rhizosphere	PGPAAGGGEPALARTVAGLEQKLASVKSRQRRLTEENAKLRDQLRAAQESLAQAQERTGAERIGRLDSAEIEVLERLLSPLRDKGGRPGEAGAG*
Ga0070671_1009757931	3300005355	Switchgrass Rhizosphere	ARRLLLQVVQRLGTLPVEGPEPADAAPEGSVASERVDSEVSLARAVAGLEQKLASVRSTQRRLTEENAKLREQLRAAQESLAQAQERAAADPAAVRLDSAEIRLLERLLSPLRDKGTRPEEAGAG*
Ga0070709_107915501	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	ARRLLLQVVQRLGTLPVEGPEPADAAPGEGVDTEGADSEVSLARAVAGLEQKLASVRSTQRRLTEENAELREQLRAAQESLAQAQERAAADPAAVRLDSAEIRLLERLLSPLRDKGTRPEEAGAG*
Ga0070710_104763532	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	SEVSLARAVAGLEQKLASVRSTQRRLTEENAKLREQLRAAQESLAQAQERAAADPAAVRLDSAEIRLLERLLSPLRDKGTRQEEAGAG*
Ga0070662_1010594452	3300005457	Corn Rhizosphere	QLLLQVVQRLGADPDLAEDAVPGPAAGGDEPALARTVAGLEQKLASVKSRQRRLTEENAKLRDQLRAAQESLAQAQERTGAERIGRLDSAEIEVLERLLSPLRDKGSRPGEAGAG*
Ga0070695_1014747942	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	VAGLEQKLASVKSRQRRLTEENAKLRDQLRAAQESLAQAQERTGAERIGRLDSAEIEVLERLLSPLRDKGSRPGEAGAG*
Ga0070693_1002683521	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	VSLVRAVAGLEQKLASVRSTQRRLTEENAKLREQLRAAQESLAQAQERAAADPAAVRLDSAEIRLLERLLSPLRDKGTRQQDAGAG*
Ga0066706_106411951	3300005598	Soil	RRLLLQVVQRLGAPPVPVEGAGPGSAAGGGDAALARTVAGLEHKLASVRSRQRRLTDENAKLREQLRAAQESLAQAQERAGAERIAERLDSAEIELLERLLSPLRGKGSRPEETGAG*
Ga0066706_114121142	3300005598	Soil	LTEENAKLREQWGAAQESLAQAQEGAAADPAAVRLDSAEIRLLERLLSPLRDKGTRQEEAGAG*
Ga0068856_1020859402	3300005614	Corn Rhizosphere	LASVKSRQRRLTEENAKLRDQLRAAQESLAQAQERTGAERIGRLDSAEIEVLERLLSPLRDKGSRPGEAGAG*
Ga0068864_1015847721	3300005618	Switchgrass Rhizosphere	ELARRLLLQVVQRLGTLPVEGPEPADAAPEEGVASERVDSEVSLARAVAGLEQKLASVRSTQRRLTEENAKLREQLRAAQESLAQAQERAAADPAAVRLDSAEIRLLERLLSPLRDKGTRPEEAGAG*
Ga0066903_1041717642	3300005764	Tropical Forest Soil	RKGGQAAAVAGAADAAEDFDYDELARRLLQQLVQRLGEPEPEEETAGPGGDASLARTVAGLEHKLATVRSKQRRLTEENARLREQLRAAQESLAQAQESGGLIAGRLDSAEVKVLERLLSPLRDKGARQDEAGTG*
Ga0066903_1060147872	3300005764	Tropical Forest Soil	QRRLTEENAKLREQLRAAQESLAQAHERAAADPAAVRLDSAEIRLLERLLSPLRDKGTRQEEAGAG*
Ga0066903_1064509051	3300005764	Tropical Forest Soil	EAADSDVSLARAVAGLEQKLASVRSTQQRLSEENAKLREQLRAAQESLAQAQERAAADPAAVRLDSAEIRLLERLLSPLRDKGARQEEAGAG*
Ga0075017_1000647661	3300006059	Watersheds	AGLEHKLASVRSKQQRLTEENARLREQLRAAQESLAQAEERASAAQSSARLDSAEATLLERLLSPRREPGTRQEEAGTG*
Ga0079222_112274351	3300006755	Agricultural Soil	TLPVEGPEPADAAPGEGVDTEGADSEVSLARAVAGLEQKLASVRSTQRRLTEENAELREQLRAAQESLAQAQERAAADPAAVRLDSAEIRLLERLLSPLRDKGTRPEEAGAG*
Ga0075425_1004433101	3300006854	Populus Rhizosphere	VAGLEQKLASVKSRQRRLTEENAKLREQLRAAQESLAQAQERTGAERIAGRLDSAEIELLERLLSPLRDKGSRPGEAGAG*
Ga0075429_1007594831	3300006880	Populus Rhizosphere	AEDAVPGPAAGGGEPALARTVAGLEQKLASVKSRQRRLTEENAKLREQLRAAQESLAQAQERTGAERIAGRLDSAEIELLERLLSPLRDKGSRPGEAGAG*
Ga0079219_106662382	3300006954	Agricultural Soil	EQKLASVRSTQRRLTEENAKLREQLRAAQESLAQAQERAATDPAAVRLDSAEIRLLERLLSPLRDKGTRPEEAGAG*
Ga0066710_1022652211	3300009012	Grasslands Soil	GGHAPAAAGAEDFDYDELARRLLQQLVQRLAEPGQEPEEDTADTGGDASLARTVAGLEHKLATVRSKQRRLTEENARLREQLRAAQDSLAQAQESGGRIAGRLDSAEFRMLERLLSPLRDKGTRQDEAGTG
Ga0105240_120877272	3300009093	Corn Rhizosphere	LEQKLASVKSRQRRLTEENAKLREQLRAAQESLAQAQERTGAERIAGRLDSAEIEVLERLLSPLRDKGSRPGEAGAG*
Ga0066709_1038554152	3300009137	Grasslands Soil	TVAGLEQKLASVKSRQRRLTEENAKLREQLRAAQESLAQAQERTGAERIAGRLDSAEIELLERLLSPLRDKGSRPEETGAG*
Ga0126374_115347981	3300009792	Tropical Forest Soil	RRLTEENAKLREQLRAAQESLAQAHERAAADPAAVRLDSAEIRLLERLLSPLRDKGTRQEEAGAG*
Ga0126380_106838162	3300010043	Tropical Forest Soil	EPAEPAAAGEGADSDVSLARAVAGLEQKLASVRSRQRRLTEENAKLREQLRAALESLAQAQERAAADPGAVRLDSAEIRLLERLLSPLRDKGTRQEEAGAG*
Ga0126384_101360563	3300010046	Tropical Forest Soil	EGPEPAEAAPPGEGADSDVSLARAVAGLEQKLASVRSRQRRLTEENAKLREQLRAAQESLAQAQERAAADPAAVRLDSAEIRLLERLLSPLRDKGTRQEEAGAG*
Ga0126384_109365602	3300010046	Tropical Forest Soil	VRSKQRRLTEENAKLREQLRAAQESLAQAQERAGAERIAGRLDSAEIGLLERLLPPLRNKAARSEETGTG*
Ga0127503_110198521	3300010154	Soil	RRLLLQVVQRLGTQPVEGPEPPDAAPGEGADGERADSERADSEVSLARAVAGLEQKLASVRSTQRRLTEENAELREQLRAAQESLAQAQERAAADPAAVRLDSAEIRLLERLLSPLRDKGARQEEAGAG*
Ga0134109_101822002	3300010320	Grasslands Soil	APAAAGAEDFDYDELARRLLQQLVQRLAEPGQEPEEDTADTGGDASLARTVAGLEHKLATVRSKQRRLTEENARLREQLRAAQDSLAQAQESGGRIAGRLDSAEIELLERLLSPLRDKGSRPEETGAG*
Ga0126370_103837092	3300010358	Tropical Forest Soil	QQLVQRLGEPEPEADTAGPGSDASLARTVAGLEHKLATVRSKQRRLTEENARLRDQLRAAQESLAQAQESGGLIAGRLDSAEVRVLERLLSPLRDKGARQDEAGTG*
Ga0126370_117290451	3300010358	Tropical Forest Soil	LQVVQRLGTLPVEGPETAEAAAPGEGVDSDVSLARAVAGLEQRLASIRSRQRRLTEENAKLREQLRAAQESLAQAQERAAADPAAVRLDSAEIRLLERLLSPLRDKGTRQEEAGAG*
Ga0126376_123983981	3300010359	Tropical Forest Soil	AAADAAEAAEDFDYDELARRLLQQLVQRLGEPEPEEDGVGTGSDASLARTVAGLEHKLATVRSKQRRLTEENARLREQLRAAQESGGRIAGRLDSAEVEVLERLLSPLRDKGARQDEAGTG*
Ga0126372_125015611	3300010360	Tropical Forest Soil	GAEGTEEFDYDELARRLLLQVVQRISTLPVEGPEPAEDAAPGEGADDVSLARAVAGLEQKLASIRSKQRRLTEENAKLREQLRAAQESLAQAQERAAADPAAVRLDSAEIRLLERLLSPLRDKGTRQEEAGAG*
Ga0126372_128834191	3300010360	Tropical Forest Soil	SKQRRLTEENARLREQLRTAQESLAQAQESGGPIAGRLDSAEVKVLERLLSPLRDKGAQQEEAGTG*
Ga0126378_107930241	3300010361	Tropical Forest Soil	LARRLLLQVVQRLGTLPVEGPEPAEAAAPGEGVDSDVSLARAVAGLEQRLASIRSKQRRLTEENAKLREQLRAAQESLAQAQERAAADPAAVRLDSAEIRLLERLLSPLRDKGTRQEEAGAG*
Ga0126378_115125802	3300010361	Tropical Forest Soil	EDAGPVGVAADSDASLPRAVAGLEQKLASVRSNQQRLTEENAKLREQLRAAQESLAQAQERAAADPAAVRLDSAEIRLLERLLSPLRDKGSRQEEAGAG*
Ga0126377_109855991	3300010362	Tropical Forest Soil	LPVEGPEPAEDAAPGEGADDVSLARAVAGLEQKLASIRSKQRRLTEENAKLREQLRAAQESLAQAQERAAADPAAVRLDSAEIRLLERLLSPLRDKGTRQEEAGAG*
Ga0126379_114880482	3300010366	Tropical Forest Soil	ASLARTVASLEHKLATVRSKQRRLTEENARLREQLRAVQESLAQAQEGGGRIAGRLDSAEVEVLERLLSPLRDKGARQDEAGTG*
Ga0126381_1012905131	3300010376	Tropical Forest Soil	TAPGPGSAPAEDTEPGEAGASDPSLARAVAGLEQKLASVRSNQQRLTEENAKLREQLRAAQESLAQAQERAAADPAAVRLDSAEIRLLERLLSPLRDKGSRQEEAGAG*
Ga0134126_113846811	3300010396	Terrestrial Soil	GSVASERVDSEVSLARAVAGLEQKLASVRSTQRRLTEENAKLREQLRAAQESLAQAQERAAADPAAVRLDSAEIRLLERLLSPLRDKGTRQEEAGAG*
Ga0126383_127107271	3300010398	Tropical Forest Soil	QKLASVRSNQQRLTEENAKLREQLRAAQESLAQAQERAGAERIAGRLDSAEIGLLERLLPPLRNKAARSEETGTG*
Ga0126350_119061432	3300010880	Boreal Forest Soil	VASLEQKLASVQSKQRRLTEENAKLREQLQAAQESLAQAEARDSAGSIAGRFGTAEVLLLERLLSPLRDQRDRHEEAGAG*
Ga0151490_17722181	3300011107	Soil	KALRKPRHDRRLDELARRLLLEVVQRLGTPPGRGPEPTEDTEPGEDAGGDASLARAVASLEHKLASVRSKQRRLTEENAKLREQLRAAQESLAQAQERAGAERIAGRLDSAEVSLLERLLSPLRDKGTRQEEAGAG*
Ga0137364_110155581	3300012198	Vadose Zone Soil	RLLLQVVQRLSSLPVEGPEPAEDAGPGEGADSDVSLARAVAGLEQKLASIRSNQRRLTEENARLREQLRAAQESLAQAQERAAADPAAVRLDSAEIRLLERLLSPLRDKGPRQEEAGAG*
Ga0137380_109276962	3300012206	Vadose Zone Soil	YDELARRLLLQVVQRLSSLPVEGPEPAEDAGPGEGADSDVSLARAVAGLEQKLASIRSNQRRLTEENAKLREQLRAAQESLAQAQERAAADPAAVPLDSAEIRLLERLLSPLRDKGTRQEEAGAG*
Ga0137381_105147182	3300012207	Vadose Zone Soil	SLPVEGPEPAEDAGPGEGADSDASLARAVAGLEQKLASVRSNQRRLTEENAKLREQLRAAQESLAQAQERAAADPAAVPLDSAEIRLLERLLSPLRDKGTRQEEAGAG*
Ga0137407_112333022	3300012930	Vadose Zone Soil	AVAGLEQKLASVRSNQQRLTEENAKLREQLRAAQESLAQAQERAAADPAAVRLDSAEVRLLERLLSPLRDKGTRQEEAGAG*
Ga0164301_104670681	3300012960	Soil	GPGEGADSDVSLARAVAGLEQKLASVRSNQQRLTEENAKLREQLRAAQESLAQAQERAGADPAAVHLDSAEIRLLERLLSPLRDKGPRQEEAGAG*
Ga0126369_116642741	3300012971	Tropical Forest Soil	TEEFDYDELARRLLLQVVQRISTLPVEGPEPAEDAAPGEGADDVSLARAVAGLEQKLASIRSKQRRLSEENAKLREQLRAAQESLAQAQERAAADPAAVRLDSAEIRLLERLLSPLRDKGTRQEEAGAG*
Ga0157375_112052602	3300013308	Miscanthus Rhizosphere	QRLGTLPVEGPEPADAAPGEGVDTEGADSEVSLARAVAGLEQKLASVRSTQRRLTEENAKLREQLRAAQESLAQAQERAAADPAAVRLDSAEIRLLERLLSPLRDKGTRPEEAGAG*
Ga0182034_104451382	3300016371	Soil	SLARAVAGLEQKLASVRSNQQRLTEENAKLREQLRAAQESLAQAQERAAVDPAAVRLDSAEIRLLERLLSPLRDKGSRQEEAGAG
Ga0187775_102992301	3300017939	Tropical Peatland	LQVVQRLSTLPVLGPEPAEDAGPGEHADSDVSLARAVAGLEQKLASVRSNQQRLTEENAKLREQLRAAQESLAQAQERAAADPAAVRLDSAEIRLLERLLSPLRDKGARQEEAGAG
Ga0187785_100494132	3300017947	Tropical Peatland	DELARRLLLQVVQRLSTLPVQGPEPAEDARPSEGAGSDASLARAVAGLEQKLASVRSNQQRLTEENAKLREQLRAAQESLAQAQERAATDPAAVRLDSAEIRLLERLLSPLRDKGSRQEEAGAG
Ga0187785_102391131	3300017947	Tropical Peatland	DVSLARAVAGLEQKLASVRSTQQRLSEENTKLREQLRAAQESLAQAQERAAADPAAGRLDSAEIRLLERLLSPLRDKGARQEEAGAG
Ga0187776_112543471	3300017966	Tropical Peatland	MAARRLLLQVVQRLSTLPVLGPELPAEAGPGEGADSDVSLARAVAGLEQKLASVRSKQRRLTEENAKLREQLRAAQESLAQAQERAAADPAAVRLDSAEIRLLERLLSPLRDKGPRQEEAGAG
Ga0187787_101066482	3300018029	Tropical Peatland	GPGEHADSDVSLARAVAGLEQKLASVRSTQQRLSEENAKLREQLRAAQESLAQAQERAAADPSAVRLDSAEIRLLERLLSPLRDKGARQEEAGAG
Ga0187766_102759982	3300018058	Tropical Peatland	VQRLGVPGQGREPADDGGPGEEADDDASLARAVASLEQKLASVRSKQRRLAEENAELREQLRAAQESLAQAQERADAERIAGRLDSAEVSLLERLLSPLRDKGAREEEAGTG
Ga0187774_108064021	3300018089	Tropical Peatland	LSTLPVPGPEPAEDTGPGEHADSDVSLARAVAGLEQKLASVRSTQQRLSEENAKLREQLRAAQESLAQAQERAAADPAAVRLDSAEIRLLERLLSPLRDKGARQEEAGAG
Ga0210394_109603061	3300021420	Soil	ARPVAGQGGAQAPAAEGGAASTEEFDYDELARRLLLQVVERLSTLPVEGAEPVEDAGPGEGADSDVSLARAVAGLEQKLASVRSNQQRLTEENAKLREQLRAAQESLAQAQERAGADPAAVHLDSAEIRLLERLLSPLRDKGPRQEEAGAG
Ga0222622_110624431	3300022756	Groundwater Sediment	GPAAGGGEASLARTVASLEHKLASVRSRQRRLTEENAKLREQLRGAQESLAQAQERAGAERIAGRLDSAEIELLERLLSPLRDKGSRPEEAGAG
Ga0207693_112446021	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	GADSDVSLARAVAGLEQKLASIRSNQQRLTEENAKLREQLRAAQESLAQAQERAAADPAAVHLDSAEIRLLERLLSPLRDKGPRQEEAGAG
Ga0207700_120320751	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	LARAVAGLEQKLASVRSNQRRLTEENAKLRDQLRAAQESLAQAQERAAADPAAVRLDSAEIRLLERLLSPLRDKGTRQEEAGAG
Ga0207700_120371231	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	ADSYVSLARAVAGLEQKLASVRSNQQRLTEENAKLREQLRAAQESLAQAQERAAADPAAVHLDSAEIRLLERLLSPLRDKGPRQEEAGAG
Ga0207665_106646032	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	LARAVAGLEQKLASVRSTQRRLTEENAELREQLRAAQESLAQAQERAAADPAAVRLDSAEIRLLERLLSPLRDKGTRQEEAGAG
Ga0207676_103442331	3300026095	Switchgrass Rhizosphere	RLLLQVVQRLGTLPVEGPEPADAAPGEGVDTEGADSEVSLARAVAGLEQKLASVRSTQRRLTEENAELREQLRAAQESLAQAQERAAADPAAVRLDSAEIRLLERLLSPLRDKGTRQEEAGAG
Ga0207674_119333441	3300026116	Corn Rhizosphere	QRGTQVAAAESGAETAEEFNYDELARRLLLQVVQRLGTLPVEGPEPADAAPGEGVDTEGADSEVSLARAVAGLEQKLASVRSTQRRLTEENAELREQLRAAQESLAQAQERAAADPAAVRLDSAEIRLLERLLSPLRDKGTRPEEAGAG
Ga0179587_106742741	3300026557	Vadose Zone Soil	VRSNQQRLTEENAKLREQLRAAQESLSQAQERAAADPAAVRLDSAEVRLLERLLSPLRDKGTRQEEAGAG
Ga0209074_102549031	3300027787	Agricultural Soil	EPADAAPGEGVDTEGADSEVSLARAVAGLEQKLASVRSTQRRLTEENAELREQLRAAQESLAQAQERAAADPAAVRLDSAEIRLLERLLSPLRDKGTRPEEAGAG
Ga0209811_101808201	3300027821	Surface Soil	EGVDTEGADSEVSLARAVAGLEQKLASVRSTQRRLTEENAELREQLRAAQESLAQAQERAAADPAAVRLDSAEIRLLERLLSPLRDKGTRQEEAGAG
Ga0307292_104024561	3300028811	Soil	DELARRLLLQVVQRLGAEPGPAEDAVPGPAAGGGEPALARTVVGLEQKLASVKSRQRQLTEENAKLREQLRAAQESLAQAQERTGAERIAGRLDSAEIELLERLLSPLRGKGSRPGEAGA
Ga0307302_101562742	3300028814	Soil	RQRRLTEENAKLREQLRAAQESLAQAQERTGAERIAGRLDSAEIELLERLLSPLRDKGSRPEEAGAG
Ga0307308_102941061	3300028884	Soil	AEPGPAEDAVPGPAAGGGEPALARTVVGLEQKLASVKSRQRRLTEENAKLREQLRAAQESLAQAQERAGAERIAGRLDSAEVSLLERLLSPLRDKGTRQDEAGAG
Ga0307498_100367381	3300031170	Soil	LARAMAGLEQKLASVRSNQQRLTEENAKLREQLRAAQESLAQAQERAAADPAAVRLDSAEIRLLERLLSPLRDKGTRQEEAGAS
Ga0318516_103733451	3300031543	Soil	ADADSDVSLARAVAGLEQKLASVRSNQQRLTEENAKLREQLRAAQESLAQAQERAAADPAAVRLDSAEIRLLERLLSPLRDKGSRQEEAGAG
Ga0318534_101262762	3300031544	Soil	PGADADSDVSLARAVAGLEQKLASVRSNQQRLTEENAKLREQLRAAQESLAQAQERAAADPAAVHLDSAEIRLLERLLSPLRDKGPRQEEAGAG
Ga0307374_101792501	3300031670	Soil	QRKLTEENAQLREQLRAAQESLVRAQEHADSGRIAGQLDSAEAGLLERLLSPLRDRGDRGDRGDRHEEAGAG
Ga0318572_106080271	3300031681	Soil	LEQKLASVRSNQQRLTEENAKLREQLRAAQESLAQAQERAAADPAAVRLDSAEIRLLERLLSPLRDKGSRQEEAGAG
Ga0318560_102093491	3300031682	Soil	PVEGPEPSEDAGPGADADSDVSLARAVAGLEQKLASVRSNQQRLTEENAKLREQLRAAQESLAQAQERAAADPAAVRLDSAEIRLLERLLSPLRDKGSRQEEAGAG
Ga0318493_101998141	3300031723	Soil	PEPSEDAGPGADADSDVSLARAVAGLEQKLASVRSNQQRLTEENAKLREQLRAAQESLAQAQERAAVDPAAVRLDSAEIRLLERLLSPLRDKGSRQEEAGAG
Ga0306918_104154222	3300031744	Soil	AEPGEDAAGDPSLARAVAGLEHKLASVRSKQRRLAEENARLREQLRAAQDSLAQAEERAAAQASARLDTAEATLLERLLSPLRDQSTSQKEAGTA
Ga0318502_100287524	3300031747	Soil	DSDLSLARAVAGLEQKLASVRSNQQRLTEENAKLREQLRAAQESLAQAQERAAADPAAVRLDSAEIRLLERLLSPLRDKGSRQEEAGAG
Ga0318521_103241522	3300031770	Soil	VSLARAVAGLEQKLASVRSNQQRLTEENAKLREQLRAAQESLAQAQERAAADPAAVRLDSAEIRLLERLLSPLRDKGSRQEEAGAG
Ga0318503_101114231	3300031794	Soil	ASVRSKQRRLAEENARLREQLRAAQDSLAQAEERAAAQASARLDTAEATLLERLLSPLRDQSTSQKEAGTA
Ga0318565_101017762	3300031799	Soil	TLPVEGPEPAEDAGPGADADSDLSLARAVAGLEQKLASVRSNQQRLTEENAKLREQLRAAQESLAQAQERAAVDPAAVRLDSAEIRLLERLLSPLRDKGSRQEEAGAG
Ga0318567_101988032	3300031821	Soil	RLRTLPVEGPEPAEDAGPGADADSDLSLARAVAGLEQKLASVRSNQQRLTEENAKLREQLRAAQESLAQAQERAAADPAAVHLDSAEIRLLERLLSPLRDKGSRQEEAGAG
Ga0318517_101241432	3300031835	Soil	SNQQRLTEENAKLREQLRAAQESLAQAQERAAVDPAAVRLDSAEIRLLERLLSPLRDKGSRQEEAGAG
Ga0318495_100678591	3300031860	Soil	AGLEHKLASVRSKQRRLAEENARLREQLRAAQDSLAQAEERAAAQASARLDTAEATLLERLLSPLRDQGTSQKEAGTA
Ga0318495_103300711	3300031860	Soil	LEQKLASVRSNQQRLTEENAKLREQLRAAQESLAQAQERAAVDPAAVRLDSAEIRLLERLLSPLRDKGSRQEEAGAG
Ga0306919_106165751	3300031879	Soil	ERLSTLPVEGPEPREDAGPGGEDSDVSLARAVAGLEQKLASVRSNQQRLTEENAKLREQLRAAQESLAQAQERAAADPAAVRLDSAEIRLLERLLSPLRDKGSRQEEAGAG
Ga0318536_103551461	3300031893	Soil	LSTLPVEGPEPSEDAGPGADADSDVSLARAVAGLEQKLASVRSNQQRLTEENAKLREQLRAAQESLAQAQERAAADPAAVRLDSAEIRLLERLLSPLRDKGSRQEEAGAG
Ga0318536_105540631	3300031893	Soil	VAGLEHKLASVRSKQRRLAEENARLREQLRAAQDSLAQAEERAAAQASARLDTAEATLLERLLSPLRDQS
Ga0306923_102334691	3300031910	Soil	LQVVQRLSTLPVEGPEPSEDAGPGADADSDVSLARAVAGLEQKLASVRSNQQRLTEENAKLREQLRAAQESLAQAQERAAADPAAVRLDSAEIRLLERLLSPLRDKGSRQEEAGAG
Ga0310913_112491091	3300031945	Soil	TLPEDAEPGEDAAGDPSLARAVAGLEHKLASVRSKQRRLAEENARLREQLRAAQDSLAQAEERAAAQASARLDTAEATLLERLLSPLRDQSTSQKEAGTA
Ga0306926_106827251	3300031954	Soil	LPVEGPEPAEDAGPGADADSDLSLARAVAGLEQKLASVRSNQQRLTEENAKLREQLRAAQESLAQAQERAAADPAAVRLDSAEIRLLERLLSPLRDKGSRQEEAGAG
Ga0310911_103806001	3300032035	Soil	PAGTDPTGAGPDAALQQTVAGLEQKLASVRSNQQRLTEENAKLREQLRAAQESLAQAQERAAADPAAVRLDSAEIRLLERLLSPLRDKGSRQEEAGAG
Ga0318513_105720451	3300032065	Soil	AGPGADADSDVSLARAVAGLEQKLASVRSNQQRLTEENAKLREQLRAAQESLAQAQERAAVDPAAVRLDSAEIRLLERLLSPLRDKGSRQEEAGAG
Ga0318524_102858711	3300032067	Soil	SDLSLARAVAGLEQKLASVRSNQQRLTEENAKLREQLRAAQESLAQAQERAAADPAAVRLDSAEIRLLERLLSPLRDKGSRQEEAGAG
Ga0318553_103180871	3300032068	Soil	PGADADSDVSLARAVAGLEQKLASVRSNQQRLTEENAKLREQLRAAQESLAQAQERAAVDPAAVRLDSAEIRLLERLLSPLRDKGSRQEEAGAG
Ga0306924_100864704	3300032076	Soil	PGEDAAGDPSLARAVAGLEHKLASVRSKQRRLAEENASLREQLRAAQDSLAQAEERAAAQSSARLDSAEATLLERLLSPLRDQGTGQKEAGTA
Ga0306924_108033232	3300032076	Soil	RAVAGLEQKLASVRSNQQRLTEENAKLREQLRAAQESLAQAQERAAADPAAVRLDSAEIRLLERLLSPLRDKGSRQEEAGAG
Ga0306924_126142851	3300032076	Soil	PVEGADNDVSLARAVAGLEQKLASVRSNQQRLTEENAKLREQLRAAQESLAQAQERAAADPAAVHLDSAEIRLLERLLSPLRDKGPRQEEAGAG
Ga0307470_112500581	3300032174	Hardwood Forest Soil	LLQVMQRLGAEPAAGGGEPGLAQTLAGLEQKLASVKSRQRRLTEENAKLREQLRAAQESLAQAQERTGAERIAGRLDSAEIELLERLLSPLRDKGSRPGEAGAG
Ga0307472_1013294331	3300032205	Hardwood Forest Soil	APALPRGGKGGAREAAAAGTEDFDYDELARRLLLQVVQRLGAEPAAGGGEPGLARTVAGLEQKLASVKSRQRRLTEENAKLRDQLRAAQESLAQAQERTGAERIGRLDSAEIEVLERLLSPLRDKGGRPGEAGAG
Ga0335085_102576831	3300032770	Soil	RLLLQVVQRLSTLPVEGPEPAEAAGPGESADDDVSLARAVAGLEQKLASVRSTQQRLSEENTKLREQLRAAQESLAQAQERAAADPAAGRLDSAEIRLLERLLSPLRDKGARQEEAGAG
Ga0335082_103885282	3300032782	Soil	RLLLQVVQRLSTPPVQGPEPPAEAGPGEGAGSDVSLARAVAGLEQKLASVRSKQRRLSEENAKLRDQLRAAQESLAQAQKRAAADPAAVRLDSAEIRLLERLLSPLRDKGARQEEAGAG
Ga0335082_116436241	3300032782	Soil	AEDAGPGEHADSDVSLARAVAGLEQKLASVRSTQQRLSEENAKLREQLRAAQESLAQAQERAATDPAAVRLDSAEIRLLERLLSPLRDKGARQEEAGAG
Ga0335079_121626061	3300032783	Soil	AEDAGPGADSDVSLARAVAGLEQKLASIRSNQQRLTEENAKLREQLRAAQESLAQAQQRAAADPAAIRLDSAEIRLLERLLSPLRDKGTRQEEAGAG
Ga0335077_107100721	3300033158	Soil	QGPEPPAEAGAGEGADSDVSLARAVAGLEQKLASVRSKQRRLSEENAELREQLRAAQESLAQAQERAAADPAAVRLDSAEIRLLERLLSPLRDKGARQEEAGAG
Ga0310914_107358192	3300033289	Soil	VQRLSTLPVEGPEPSEDAGPGADADSDVSLARAVAGLEQKLASVRSNQQRLTEENAKLREQLRAAQESLAQAQERAAVDPAAVRLDSAEIRLLERLLSPLRDKGSRQEEAGAG
Ga0318519_103830212	3300033290	Soil	STEEFDYVELARRLLLQVVERLSTLPVEGAGSVEAGGPVEGADNDVSLARAVAGLEQKLASVRSNQQRLTEENAKLREQLRAAQESLAQAQERAAADPAAVRLDSAEIRLLERLLSPLRDKGSRQEEAGAG
Ga0373950_0010792_2_217	3300034818	Rhizosphere Soil	SVRSTQRRLTEENAKLREQLRAAQESLAQAQERAAADPAAVRLDSAEIRLLERLLSPLRDKRTRQEEAGAG
Ga0373958_0067294_9_296	3300034819	Rhizosphere Soil	VDTEGADSEVSLARAVAGLEQKLASVRSTQRRLTEENAELREQLRAAQESLAQAQERAAADPAAVRLDSAEIRLLERLLSPLRDKGTRPEEAGAG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F072213

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences