Metagenome / Metatranscriptome Family F072192

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F072192
Family Type	Metagenome / Metatranscriptome
Number of Sequences	121
Average Sequence Length	86 residues
Representative Sequence	MWSRKSASQGEPRKRHLLLRIVLILVIVGLCVYILPTPWAFHMGGKFSPLGEWDGYGPVQASNGGRYLLYTHLRGGIV
Number of Associated Samples	95
Number of Associated Scaffolds	121

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	96.64 %
% of genes near scaffold ends (potentially truncated)	98.35 %
% of genes from short scaffolds (< 2000 bps)	92.56 %
Associated GOLD sequencing projects	89
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.35

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (76.860 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (53.719 % of family members)
Environment Ontology (ENVO)	Unclassified (61.983 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (52.893 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 28.30% β-sheet: 17.92% Coil/Unstructured: 53.77%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.35
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.35
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 121 Family Scaffolds
PF04199	Cyclase	73.55
PF02776	TPP_enzyme_N	4.13
PF08241	Methyltransf_11	0.83
PF07282	OrfB_Zn_ribbon	0.83
PF00171	Aldedh	0.83

COG ID	Name	Functional Category	% Frequency in 121 Family Scaffolds
COG1878	Kynurenine formamidase	Amino acid transport and metabolism [E]	73.55
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	0.83
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	0.83
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	76.86 %
Unclassified	root	N/A	23.14 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	76.86 %
Unclassified	root	N/A	23.14 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	76.86 %
Unclassified	root	N/A	23.14 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	33.88 %
Unclassified	root	N/A	23.14 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	33.88 %
Unclassified	root	N/A	23.14 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.83 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	25.62 %
Unclassified	root	N/A	23.14 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.14 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.83 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.14 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	0.83 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.14 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	0.83 %
Acidobacteriaceae bacterium URHE0068	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002914\|JGI25617J43924_10331203	All Organisms → cellular organisms → Bacteria	527	Open in IMG/M
3300003505\|JGIcombinedJ51221_10132092	All Organisms → cellular organisms → Bacteria	1004	Open in IMG/M
3300004479\|Ga0062595_102014182	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	558	Open in IMG/M
3300004633\|Ga0066395_10434952	All Organisms → cellular organisms → Bacteria	745	Open in IMG/M
3300005181\|Ga0066678_10310316	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1034	Open in IMG/M
3300005332\|Ga0066388_100092059	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3459	Open in IMG/M
3300005332\|Ga0066388_106742878	All Organisms → cellular organisms → Bacteria	578	Open in IMG/M
3300005363\|Ga0008090_10011688	All Organisms → cellular organisms → Bacteria	586	Open in IMG/M
3300005363\|Ga0008090_10087592	All Organisms → cellular organisms → Bacteria	728	Open in IMG/M
3300005445\|Ga0070708_101422501	All Organisms → cellular organisms → Bacteria	647	Open in IMG/M
3300005450\|Ga0066682_10303543	All Organisms → cellular organisms → Bacteria	1030	Open in IMG/M
3300005471\|Ga0070698_100801854	All Organisms → cellular organisms → Bacteria	886	Open in IMG/M
3300005587\|Ga0066654_10841392	All Organisms → cellular organisms → Bacteria	523	Open in IMG/M
3300005610\|Ga0070763_10928189	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	519	Open in IMG/M
3300005764\|Ga0066903_101577746	All Organisms → cellular organisms → Bacteria	1243	Open in IMG/M
3300006791\|Ga0066653_10718470	Not Available	518	Open in IMG/M
3300006806\|Ga0079220_11130177	All Organisms → cellular organisms → Bacteria	638	Open in IMG/M
3300006806\|Ga0079220_11694032	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	552	Open in IMG/M
3300006871\|Ga0075434_100030909	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5278	Open in IMG/M
3300009088\|Ga0099830_10294502	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1294	Open in IMG/M
3300009137\|Ga0066709_100038072	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5235	Open in IMG/M
3300010359\|Ga0126376_11258379	All Organisms → cellular organisms → Bacteria	758	Open in IMG/M
3300010360\|Ga0126372_10714125	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	981	Open in IMG/M
3300010361\|Ga0126378_10169063	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2243	Open in IMG/M
3300010361\|Ga0126378_11262736	All Organisms → cellular organisms → Bacteria	835	Open in IMG/M
3300010361\|Ga0126378_12067916	All Organisms → cellular organisms → Bacteria	649	Open in IMG/M
3300010361\|Ga0126378_12564178	Not Available	582	Open in IMG/M
3300010362\|Ga0126377_12565720	Not Available	585	Open in IMG/M
3300010366\|Ga0126379_10685015	All Organisms → cellular organisms → Bacteria	1118	Open in IMG/M
3300010398\|Ga0126383_10014389	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5880	Open in IMG/M
3300010868\|Ga0124844_1123477	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	988	Open in IMG/M
3300010868\|Ga0124844_1125523	Not Available	979	Open in IMG/M
3300010868\|Ga0124844_1162171	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	839	Open in IMG/M
3300010876\|Ga0126361_11150082	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	641	Open in IMG/M
3300011270\|Ga0137391_10977663	All Organisms → cellular organisms → Bacteria	690	Open in IMG/M
3300012199\|Ga0137383_10502450	All Organisms → cellular organisms → Bacteria	888	Open in IMG/M
3300012917\|Ga0137395_10361161	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1036	Open in IMG/M
3300012917\|Ga0137395_10408780	Not Available	972	Open in IMG/M
3300012924\|Ga0137413_11791186	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	507	Open in IMG/M
3300016294\|Ga0182041_11372964	All Organisms → cellular organisms → Bacteria	648	Open in IMG/M
3300016294\|Ga0182041_11544049	All Organisms → cellular organisms → Bacteria	612	Open in IMG/M
3300016319\|Ga0182033_10747786	All Organisms → cellular organisms → Bacteria	859	Open in IMG/M
3300016319\|Ga0182033_11322830	All Organisms → cellular organisms → Bacteria	648	Open in IMG/M
3300016341\|Ga0182035_11057112	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	721	Open in IMG/M
3300016357\|Ga0182032_11435680	All Organisms → cellular organisms → Bacteria	598	Open in IMG/M
3300016387\|Ga0182040_10662228	All Organisms → cellular organisms → Bacteria	850	Open in IMG/M
3300016422\|Ga0182039_11211064	All Organisms → cellular organisms → Bacteria	682	Open in IMG/M
3300021403\|Ga0210397_11436542	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	536	Open in IMG/M
3300021477\|Ga0210398_10649307	Not Available	855	Open in IMG/M
3300026326\|Ga0209801_1178919	All Organisms → cellular organisms → Bacteria	873	Open in IMG/M
3300026551\|Ga0209648_10261014	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	1274	Open in IMG/M
3300027862\|Ga0209701_10613622	Not Available	575	Open in IMG/M
3300031543\|Ga0318516_10183536	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1205	Open in IMG/M
3300031543\|Ga0318516_10439418	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	750	Open in IMG/M
3300031544\|Ga0318534_10181147	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1217	Open in IMG/M
3300031545\|Ga0318541_10477980	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	697	Open in IMG/M
3300031549\|Ga0318571_10460332	Not Available	506	Open in IMG/M
3300031561\|Ga0318528_10393349	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	744	Open in IMG/M
3300031572\|Ga0318515_10518813	All Organisms → cellular organisms → Bacteria	635	Open in IMG/M
3300031573\|Ga0310915_11001746	Not Available	583	Open in IMG/M
3300031640\|Ga0318555_10584914	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	605	Open in IMG/M
3300031679\|Ga0318561_10686394	Not Available	563	Open in IMG/M
3300031680\|Ga0318574_10316666	All Organisms → cellular organisms → Bacteria	907	Open in IMG/M
3300031680\|Ga0318574_10406998	All Organisms → cellular organisms → Bacteria	795	Open in IMG/M
3300031680\|Ga0318574_10684438	All Organisms → cellular organisms → Bacteria	601	Open in IMG/M
3300031681\|Ga0318572_10502539	Not Available	722	Open in IMG/M
3300031681\|Ga0318572_10936029	Not Available	515	Open in IMG/M
3300031713\|Ga0318496_10248101	All Organisms → cellular organisms → Bacteria	981	Open in IMG/M
3300031713\|Ga0318496_10766571	Not Available	532	Open in IMG/M
3300031723\|Ga0318493_10310361	All Organisms → cellular organisms → Bacteria	852	Open in IMG/M
3300031724\|Ga0318500_10476215	Not Available	626	Open in IMG/M
3300031744\|Ga0306918_10322997	All Organisms → cellular organisms → Bacteria	1193	Open in IMG/M
3300031751\|Ga0318494_10500392	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	708	Open in IMG/M
3300031751\|Ga0318494_10641312	All Organisms → cellular organisms → Bacteria	621	Open in IMG/M
3300031764\|Ga0318535_10080473	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1406	Open in IMG/M
3300031769\|Ga0318526_10275694	All Organisms → cellular organisms → Bacteria	688	Open in IMG/M
3300031769\|Ga0318526_10490620	Not Available	502	Open in IMG/M
3300031771\|Ga0318546_10357654	Not Available	1016	Open in IMG/M
3300031778\|Ga0318498_10351130	All Organisms → cellular organisms → Bacteria	658	Open in IMG/M
3300031779\|Ga0318566_10417893	All Organisms → cellular organisms → Bacteria	659	Open in IMG/M
3300031779\|Ga0318566_10470909	All Organisms → cellular organisms → Bacteria	616	Open in IMG/M
3300031793\|Ga0318548_10208466	Not Available	959	Open in IMG/M
3300031795\|Ga0318557_10143781	All Organisms → cellular organisms → Bacteria	1076	Open in IMG/M
3300031795\|Ga0318557_10345076	All Organisms → cellular organisms → Bacteria	684	Open in IMG/M
3300031796\|Ga0318576_10156437	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1064	Open in IMG/M
3300031797\|Ga0318550_10145603	Not Available	1136	Open in IMG/M
3300031797\|Ga0318550_10378715	All Organisms → cellular organisms → Bacteria	685	Open in IMG/M
3300031798\|Ga0318523_10161190	Not Available	1117	Open in IMG/M
3300031819\|Ga0318568_10793084	All Organisms → cellular organisms → Bacteria	587	Open in IMG/M
3300031831\|Ga0318564_10087129	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1382	Open in IMG/M
3300031831\|Ga0318564_10448932	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	562	Open in IMG/M
3300031832\|Ga0318499_10088972	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1188	Open in IMG/M
3300031880\|Ga0318544_10123224	All Organisms → cellular organisms → Bacteria	985	Open in IMG/M
3300031893\|Ga0318536_10672884	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	516	Open in IMG/M
3300031896\|Ga0318551_10578117	All Organisms → cellular organisms → Bacteria	647	Open in IMG/M
3300031896\|Ga0318551_10698711	All Organisms → cellular organisms → Bacteria	587	Open in IMG/M
3300031897\|Ga0318520_10495390	Not Available	754	Open in IMG/M
3300031910\|Ga0306923_10551909	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1298	Open in IMG/M
3300031912\|Ga0306921_11416831	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	763	Open in IMG/M
3300031942\|Ga0310916_11131723	All Organisms → cellular organisms → Bacteria	649	Open in IMG/M
3300031947\|Ga0310909_10332484	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1275	Open in IMG/M
3300031981\|Ga0318531_10164148	Not Available	997	Open in IMG/M
3300032009\|Ga0318563_10044208	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2270	Open in IMG/M
3300032010\|Ga0318569_10437511	Not Available	610	Open in IMG/M
3300032039\|Ga0318559_10601383	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	513	Open in IMG/M
3300032041\|Ga0318549_10124680	All Organisms → cellular organisms → Bacteria	1136	Open in IMG/M
3300032054\|Ga0318570_10340643	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	682	Open in IMG/M
3300032055\|Ga0318575_10681765	Not Available	520	Open in IMG/M
3300032059\|Ga0318533_10478887	All Organisms → cellular organisms → Bacteria	912	Open in IMG/M
3300032059\|Ga0318533_11039737	All Organisms → cellular organisms → Bacteria	600	Open in IMG/M
3300032063\|Ga0318504_10202919	Not Available	926	Open in IMG/M
3300032063\|Ga0318504_10221121	All Organisms → cellular organisms → Bacteria	887	Open in IMG/M
3300032066\|Ga0318514_10439254	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	693	Open in IMG/M
3300032089\|Ga0318525_10023255	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2966	Open in IMG/M
3300032089\|Ga0318525_10700129	Not Available	515	Open in IMG/M
3300032091\|Ga0318577_10298965	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	770	Open in IMG/M
3300032174\|Ga0307470_10251910	Not Available	1167	Open in IMG/M
3300032261\|Ga0306920_102118219	All Organisms → cellular organisms → Bacteria	784	Open in IMG/M
3300033290\|Ga0318519_10846382	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	564	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.17%
Host-Associated	Host-Associated	0.83%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	99.17%
Plants	Host-Associated → Plants	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	99.17%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	90.08%
Loam	Environmental → Terrestrial → Soil → Loam	9.09%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	64.46%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	14.05%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.44%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.44%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.48%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	1.65%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	53.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.92%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	7.44%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.79%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	5.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.96%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.48%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.65%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.65%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	1.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.83%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.83%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.83%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.83%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010868	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (PacBio error correction)	Environmental	Open in IMG/M
3300010876	Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25617J43924_103312032	3300002914	Grasslands Soil	MWGSRKSAPPPRKRHLGLRLLLIVVVVLLALYVLPTPWAFHMGGRFSALSDWNGYGPVQASNGGRYLLYTELRGG
JGIcombinedJ51221_101320921	3300003505	Forest Soil	MWGSRKSAPQSPPRRRHLGLRLLLIVVVVLFALYVLPSPWAFHIGGKFSPFGEWDGYGPVQASNGGHYLLYTQLRGGLLNNHGHGGCSFTGCDT
Ga0062595_1020141821	3300004479	Soil	MWSRKSASQGEPRKRHLLLRIVLILVIVGLCVYILPTPWAFHMGGKFSPLGEWDGYGPVQAGNGGHYLLYTHLRGGLLNNHGHAGCSIGSCDTLTGTAQLCTQGGQHY
Ga0066395_104349522	3300004633	Tropical Forest Soil	MLASRKAASKDGPRRRHIWLRLLLILIVVLLCLYVLPTPWAFHMGGRFSPLGEWDGYGPVQAGNGGHYLLYTHLRGGLANNHGHA
Ga0066678_103103161	3300005181	Soil	MWSRKSASQGEPRKRHLLLRIVLILVIVGLCVYILPTPWAFHMGGKFSPLGEWDGYGPVQASNGGHYLLYTQLRGGIVNTHGDATCSFTGCENLVGSAQLCTQGGQRYTFEL
Ga0066388_1000920591	3300005332	Tropical Forest Soil	MWASRKPASKDGPRRYLWLRLLLIVIVVLLALYVLPTPWAFHMGGTFSPFGEWDGYGPVQASNGGHYLLYTHL
Ga0066388_1067428781	3300005332	Tropical Forest Soil	MWASRKSAPEDGPRRRYIWLRLLLILIVVLLGVYVLPTPWAFHIGGKFSPIGEWDGYGPVQA
Ga0008090_100116881	3300005363	Tropical Rainforest Soil	MWASRRSAPQGQPRKRYIVLRLVLILIVGALCVYILPSPWAFHMGGTFSPLGEWDGYGPVQASNGGH
Ga0008090_100875922	3300005363	Tropical Rainforest Soil	MWASRKSASPDRPRRRYIWLRLLLILVVVLLAVYVLPTPWAFHMGGKFSALGEWDGYGPVQASNGGHYLLYTH
Ga0070708_1014225011	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MLASRKAPSKDGPRRRHIWLRLLLILIVVLLGLYVLPTPWAFHMGGRFSPLGEWDGYGPVQAGNGGHYLLYTHLRGGLANNHGHASCSLGGCETLT
Ga0066682_103035432	3300005450	Soil	MWSRKSASQGEPRKRHLLLRIVLILVIVGLCVYILPTPWAFHMGGKFSPLGEWDGYGPVQASNGGRYLLYTHLRGGIV
Ga0070698_1008018541	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MWASRKSASENGPRRLHIWLRLLLILIVVLLAVYVLPTPWAFHMGGKFSPVGEWDGYGPVQASNGGHYLLYTHLRGGLLNNHGHAS
Ga0066654_108413922	3300005587	Soil	MWSRKSASQGEPRKRHLLLRIVLILVIVGLCVYILPTPWAFHMGGKFSPLGEWDGYGPVQASNGGR
Ga0070763_109281892	3300005610	Soil	MRSRKSASQGEPRKRHLLLRIVLILVIVGLCVYILPTPWAFHMGGKFSPVGEWDGYGAVQASNGGRYLLYTHLRGGIVNDRGHATCSLTGCDSLTGTAQLCTQGGQHYTFKLTG
Ga0066903_1015777462	3300005764	Tropical Forest Soil	MLASRKAASKDGPRRRYIWLRLLLILIVVLLGLYVLPTPWAFHMGGRFSPVGEWDGYGPVQAGNGGRYLLYTHLRGGLANNHGHASCSFGGCDTLT
Ga0066653_107184701	3300006791	Soil	MWSRKSASQGEPRKRHLLLRIVLILVIVGLCVYILPTPWAFHMGGKFSPVGEWDGYGP
Ga0066665_103837711	3300006796	Soil	MWSRKSASQGEPRKRHLLLRIVLILVIVGLCVYILPTPRAFHMGGKFSPLGEWGGYGPVQASNGGRYLLYTHLRGGIVNDRGHAHCSLTGCDSLTGTAQLCTQGGQHYTFELTGAVHGWYTTNGSKTSIE
Ga0079220_111301771	3300006806	Agricultural Soil	MRNRKSASQGEPRQRHLLLRIVLILVTVGLCVYILPSPWAFHMGGKFSPLGEWDGYGPVQASNGGRY
Ga0079220_116940321	3300006806	Agricultural Soil	MRASRKSASQAGGRRHIWLRLLLILIVVLLGLYVLPTPWAFHMGSRFSPLGEWDGYGPVQAGNGGHYLLYTHLRGGLASNHGHAGCS
Ga0075434_1000309091	3300006871	Populus Rhizosphere	MRASRKSASQAGSRRHILLRFLLIVIVVLLGLYVLPAPWAFHMGGKFSPVGEWDGYGPVQSGNGGHYLLYTHLRGGFANNHGHPGCSFVSCDVL
Ga0099830_102945021	3300009088	Vadose Zone Soil	MWGSRKSAPPPRKRHLGLRLLLIVVVVLLALYVLPTPWAFHMGGRFSALSDWNGYGPVQASNGGRYLLYTELRGGIVNNHG
Ga0066709_1000380724	3300009137	Grasslands Soil	VLILVIVGLCVYILPTPWAFHMGGKFSPLGEWGGYGPVQASNGGRYLLYTHLRGGIVNDRGHAHCSLTGCDSLTGTAQLCTQGGQHYTF
Ga0126376_112583792	3300010359	Tropical Forest Soil	MLASRKAASKDGSRRRHIWLRLLLIVIVVLLGLYVLPTPWAFHMGGRFSPLGEWDGYGPVQAGNGGDYLLYRHLGVGVANNHGHDGCSLTGGVRLTVRA
Ga0126372_107141252	3300010360	Tropical Forest Soil	VLILVVVGLCVYILPTPWAFHMGGKFSPLGEWDGYGPVQASNGGRYLLYTQLRGGIINTHGDATCSFTGCDNLVGTAQLCTQGGQHYTF
Ga0126378_101690631	3300010361	Tropical Forest Soil	MWASRKSAPEDGPRRRYIWLRLLLILIVVLLGVYVLPTPWAFHIGGKFSPIGEWDGYGPVQASNGGRYL
Ga0126378_112627361	3300010361	Tropical Forest Soil	MRASRRSSSPGRPRRYILLRIILIAFVVLWALYVLPSPWAYHMGGKFSPLGEWDGYGQVHAANGGKYLLFTHLRGGIV
Ga0126378_120679162	3300010361	Tropical Forest Soil	MWASRKPASQDRPRRRYIWLRLLLILIVVLLAVYVLPTPWAFHMGGKFSALGEWDGYGPVQAS
Ga0126378_125641782	3300010361	Tropical Forest Soil	MLASRKAASKDGPRRRRIWLRLLLILIVVLLGLYVLPTPWAFHMGGRFSPVGEWDGYGPVQAGNGGHYLLY
Ga0126377_125657201	3300010362	Tropical Forest Soil	VLILVVVGLCVYILPSPWAFHMGGKFSPLGEWDGYGPVQASNGGRYLLYTHLRGGILNNRGHAHCSLTGCTSLTGTAQLCTQGGQHYTFELT
Ga0126379_106850152	3300010366	Tropical Forest Soil	MLASRKAAAKDGPRRRHIWLRLLLIVIVVLIGLYVLPTPWAFHMGSRFSPLGEWDGYGPVQAGNGGHYLLYTHLRGGLANN
Ga0126383_100143895	3300010398	Tropical Forest Soil	MWASRKSAPEDGPRRRYIWLRLLLILIVVLLGVYVLPTPWAFHIGGKFSPIGEWDGYGPVQASNGGRYLLY
Ga0124844_11234771	3300010868	Tropical Forest Soil	MLASRKAASKDGPRRRHIWLRVLLILIVVLLGLYVLPTPWAFHMGGRFSPLGEWDGYGPVQAGNGGHYLLYTHLRGGLANNHGHASCSFGGCDT
Ga0124844_11255232	3300010868	Tropical Forest Soil	MLASRKAASKDGPRRRHIWLRVLLILIVVLLGLYVLPTPWAFHMGGRFSPLGEWDGYGPVQAGNGGHYLLYTHLRGGLANN
Ga0124844_11621712	3300010868	Tropical Forest Soil	MLASRKAASKDGPRRRHIWLRVLLILIVVLLGLYVLPTPWAFHMGGRFSPLGEWDGYGPVQAGNGGHYLLYTHLRGGLANNHGHASCSFGGCDTLTGTAQLCTQGGQHY
Ga0126361_111500821	3300010876	Boreal Forest Soil	VLILVIVGLCVYILPTPWAFHMGGKFSPVGEWDGYGAVQASNGGRYLLYTHLRGGIVNDRGHATCSLTGCDSLTGTAQLCTQGGEHYTFALTGAVHGWYTTNGSKTNLE
Ga0137391_109776631	3300011270	Vadose Zone Soil	MWGSRKSAPPPRKRHLGLRLLLIVVVVLLALYVLPTPWAFHMGGRFSALSDWTGYGPVQASNGGRYLLYTEL
Ga0137383_105024502	3300012199	Vadose Zone Soil	MWASRKSASEDGPRRRYIWLRLLLILIVVLLAVYVLPAPWAFHMGGKFSPVGEWDGYGPVQASNGGHYLLYTQ
Ga0137395_103611612	3300012917	Vadose Zone Soil	MWGSRKSASQGPPRRRHLGLRLLLIVVLVLLALYVLPSPWAFHISGKFSPFGQWDGYGPIQASNGGHYLLYTHLRGGLLNNHGQGGCNFTGCDTLTGTAQLCARGGQHY
Ga0137395_104087802	3300012917	Vadose Zone Soil	MWGSRKSAPPPRKRHLGLRLLLIVVVVLLALYVLPTPWAFHMGGRFSALSDWNGYGPVQASNGGRYL
Ga0137413_117911862	3300012924	Vadose Zone Soil	MWGSRKSASQGPPRRRHLGLRLLLIVVLVLLALYVLPSPWAFHIGGKFSPFGQWDGYGPIQASNGGHYLLYTHLRGGLLNNHGQGGCNFTGCDT
Ga0182041_113729642	3300016294	Soil	MWSRKSASQGEPRKRHVLLRIVLILVVVGLCVYILPSPWAFHIGGKFSPFGEWDGYGPVQASSGGRYLLYTHLRGGLLNN
Ga0182041_115440491	3300016294	Soil	MWRSRSSSSPGRPRRYILLRLILIAVVVLWAVYVLPSPWAYHMGGRFSPLGEWDGFGPVHASNGGNYLLFTHLRGGIVVNRGHA
Ga0182033_107477861	3300016319	Soil	MWSRKPASQGEPRKRHLVLRIVLILVIVGLCVYILPTPWAFHMGGKFSPFGEWDGYGPVQASNGGRYLLYTHLRGGIVNGRGHAACSLTGCDSLI
Ga0182033_113228302	3300016319	Soil	MWASRKPASQDRPRRRYIWLRLLLILIVVLLAVYVLPTPWAFHMGGKFSPLGEWDGYGPVQAS
Ga0182035_110571121	3300016341	Soil	MWASRRSAPQGQPRKRYIVLRLVLILIVGALCVYILPSPWAFHMGGTFSPLGEWDGYGPVQASNGGHYLLYTHLRGGIVNVHGQAGCSLTSCDSLVGSAQLCTQ
Ga0182032_114356802	3300016357	Soil	MWSRKSASQGEPRKRHLVLRIVLILVIVGLCVYILPTPWAFHMGGKFSPLGEWDGYGPVQASHGGCYLLYTHLRGGLANNHG
Ga0182040_106622282	3300016387	Soil	MWASRKSASQDRPRRRYIWLRLLLILIVVLLAVYVLPTPWAFHMGGKFSPSGEWDGYGRVRASNGGSYLLFTHLRGGIVS
Ga0182039_112110642	3300016422	Soil	MRASRSSSSSGKQRRRYVLLRLILILFVVLFIVYVFPSPWAFHMGGKFSPSGEWDGYGRVRASNGGSYLLFTHLRGGIVSNHGQPSCHLLGCE
Ga0210397_114365421	3300021403	Soil	MRNRKSASQGEPRKRHLLLRIVLILVIAGLCVYILPTPWAFHMGGKFSPVGEWDGYGAVQASNGGHYLLYTHLRGGIVNDRGHAPCSLTGCDSLTGTAQLCTQGGEHYTFA
Ga0210398_106493072	3300021477	Soil	MWGSRKSAPQSPPRRRHLGLRLLLIVVVVLFALYVLPSPWAFHIGGKFSPFGEWDGYGPVQASNGGRY
Ga0209801_11789191	3300026326	Soil	MWSRKSASQGEPRKRHLLLRIVLILVIVGLCVYILPTPWAFHMGGKFSPLGEWGGYG
Ga0209648_102610141	3300026551	Grasslands Soil	MWGSRKSAPPPRKRHLGLRLLLIVVVVLLALYVLPTPWAFHMGGRFSALSDWNGYGPVQASNGGRYLLYTELRGGIVNNH
Ga0209701_106136222	3300027862	Vadose Zone Soil	MWGSRKSAPPPRKRHLGLRLLLIVVVVLLALYVLPTPWAFHMGGRFSALSDWNGYGPVQASNGGRY
Ga0318516_101835362	3300031543	Soil	MRSRKSASQGEPGKRYVLLRIVLILVVVGLCVYILPSPWAFHMGGRFSPLGEWDGYGPVQASNGGRYLLYTHLRGGIVNNRGHAHCSL
Ga0318516_104394181	3300031543	Soil	MWSRKSASQGEPRKRHLVLRIVLILVIVGLCVYILPTPWAFHMGGKFSPLGEWDGYGPVQASNGGRYLLYTHLRGGIVNDRGHAACSLTGCDSLIGTAQLCTQGGQHYTFALTGGVHGWYTTNGSKTTIK
Ga0318534_101811471	3300031544	Soil	MWASRKAASKNEPRRRYVWLRLLLILIVVLLAVYVLPSPWAFHMGGRFSPLGEWEGYGPVQVSNGGHYLLYTQLRGGILNAHGHTGCSF
Ga0318541_104779802	3300031545	Soil	MWASRRSAPQGQPRKRYIVLRLVLILIVGALCVYILPSPWAFHMGGTFSPLGEWDGYGPVQASNGGHYLLYTHLRGGIVNVHGQAGCSLTSCDSLVGSAQLCTQGGHRY
Ga0318571_104603322	3300031549	Soil	MWSRKPASQGEPRKRHLVLRIVLILVIVGLCVYILPTPWAFHMGGKFSPLGEWDGYGPVQASNGGRYLLYTHLRGGIVNDRGHAACSLTGCDSLI
Ga0318528_103933491	3300031561	Soil	MWASRKSAPQGQPRRRYLALRIVLILIVVALCVYILPAPWAFHMGGQFSPLAEWDGYGPVQAGNGGHYLLYTHLGGGIVNDHGHAACNLTGCDSLAGSAQLCTQ
Ga0318515_105188132	3300031572	Soil	MWASRKSASQDRPRRRYIWLRLLLILIVVLLAVYVLPTPWAFHMGGKFSALGEWDGYGPVQASNGGHY
Ga0310915_110017462	3300031573	Soil	MWASRKSAPQGQPRRRYLALRIVLILIVVALCVYILPAPWAFHMGGQFSPLAEWDGYGPVQAGNGGHYLLY
Ga0318555_105849142	3300031640	Soil	MWSRKSASQGEPRKRHLVLRIVLILVIVGLCVYILPTPWAFHMGGKFSPLGEWDGYGPVQASNGGRYLLYTHLRGGIVNDRGHAACSLTGCDSLIGTAQLCTQGGQHYTFALTEGVHGWY
Ga0318561_106863942	3300031679	Soil	MRASRSSSSSGKQRRRYVLLRLILILFVVLFIVYVFPSPWAFHMGGKFSPLGEWDGYGRVRASNGGGYLLFTHLRGGIVNN
Ga0318574_103166661	3300031680	Soil	MWASRRSAPQGQPRKRYIVLRLVLILIVGALCVYILPSPWAFHMGGTFSPLGEWDGYGPVQASNGGHYLLYTHLRGGIVNVHGQAGCSLTSCDS
Ga0318574_104069982	3300031680	Soil	MRASRSSSSSGKQRRRHVLLRLILILFVVLFIVYVFPSPWAFHMGGKFSPLGEWDGYGRVRASNGGSYLLFTHLRGGIVNNH
Ga0318574_106844381	3300031680	Soil	MWSRKSASQGEPRKRHLVLRIVLILVIVGLCVYILPTPWAFHMGGKFSPLGEWDGYGPVQASNGGRYLLYTHLRGGIVNDRGHA
Ga0318572_105025392	3300031681	Soil	MWASRKSASEDRPRRRYLWLRVLLILIVALLAVYVLPTPWAFHMGGKFSALGEWDGYGPVQASNGGHYLLYTHLRGGLANNHGHASCSFGGCDTLTGTAQLCTQGGQHYTFDLTGA
Ga0318572_109360291	3300031681	Soil	MWASRRPAPQGQPRKRHLALRLVLIVIVVALCVYILPTPWAFHMGGTFSPLGEWDGYGLVRASNGGHYLLY
Ga0318496_102481011	3300031713	Soil	MWASRKAASKNEPRRRYVWLRLLLILIVVLLAVYVLPTPWAFHMGGKFSPLGEWEGYGPVQVSNGGHYLLYAQLRGGILNAHGHTGCSFPGCDTLVGSAQ
Ga0318496_107665711	3300031713	Soil	MWSRKSASQGEPRKRHVLLRIVLILVVVGLCVYILPTPWAFHMGGKFSPFGEWDGYGPVQASNGGRYLLYTHLSGGIVNDRGHAACSLTGCDSLTGTAQLCTQGGQHY
Ga0318493_103103612	3300031723	Soil	MWASRKAASKNEPRRRYVWLRLLLILIVVLLAVYVLPTPWAFHMGGKFSPLGEWEGYG
Ga0318500_104762151	3300031724	Soil	MWSRKSASQGEPRKRHVLLRIVLILVVVGLCVYILPTPWAFHMGGKFSPFGEWEGYGPVQASNGGRYLLYTHLSGGIVNDRGHAACSLTGCDSLIGTAQLC
Ga0306918_103229971	3300031744	Soil	MWASRRSAPQGQPRKRYIVLRLVLILIVGALCVYILPSPWAFHMGGTFSPLGEWDGYGPVQASNGGHYLLYTHLRGGIVNVH
Ga0318494_105003922	3300031751	Soil	MRASRKSASQAGSRRHIWLRLLLIVIVVLLGLYVLPTPWAFHMGSKFSPVGEWDGYGPVQAGNGGHYLLYTHLRGGLANNHGHAGCSFGGCDTLTGTAQLCTQGGQHYTFD
Ga0318494_106413121	3300031751	Soil	MWASRKAASKNEPRRRYVWLRLLLILIVVLLAVYVLPSPWAFHMGGRFSPLGEWEGYGPVQVS
Ga0318535_100804733	3300031764	Soil	MWASRRSAPQGQPRKRYIVLRLVLILIVGALCVYILPSPWAFHMGGTFSPLGEWDGYGPVQASNGGHYLLYTHLRGGIVNVHGQAGC
Ga0318526_102756942	3300031769	Soil	MWASRRSAPQGQPRKRYIVLRLVLILIVGALCVYILPSPWAFHMGGTFSPLGEWDGYGPVQASNGGHYLLYTHLRGGIVNVHGQAGCSLTSCDSLVGSAQLC
Ga0318526_104906201	3300031769	Soil	MWSRKSASQGEPRKRHLVLRIVLILVIVGLCVYILPTPWAFHMGGKFSPLGEWDGYGPVQASNGGRYLLY
Ga0318546_103576542	3300031771	Soil	MWSRKSASQGEPRRRYLVLRIVLILVIAALCVYILPSPWAFHIGGKFSPFGEWDGYGPVQASSGGRYLLYPHLRGGLLN
Ga0318498_103511302	3300031778	Soil	MWSRKSASQGEPRKRHVLLRIVLILVVVGLCVYILPTPWAFHMGGKFSPFGEWDGYG
Ga0318566_104178932	3300031779	Soil	MWSRKSAPQGEPRKRHVLLRIVLILVVVGLCVYILPTPWAFHMGGKFSPFGEWDGYGPVQASNGGRYLLYTHLSGG
Ga0318566_104709092	3300031779	Soil	MRASRSSSSSGKQRRRHVLLRLILILFVVLFIVYVFPSPWAFHMGGKFSPLGEWDGYGRVRASNGGGYLLFT
Ga0318547_101092613	3300031781	Soil	MWASRRSAPQGQPRKRYIVLRLVLILIVGALCVYILPSPWAFHMGGTFSPLGEWDGYGPVQASNGGHYLLYTHLRGGIVNVHGQAGCSLTSCDSLVGSAQLCTQGGHRYTFELTGTVHGWYTTNGSRTNINL
Ga0318548_102084661	3300031793	Soil	MWSRKSASQGEPRKRHVLLRIVLILVVVGLCVYILPTPWAFHMGGKFSPFGEWDGYGPVQASNGGRYLLYTHLSGGIVNDRGHAACSLTGCDSLIGTAQLCTQGGQH
Ga0318557_101437812	3300031795	Soil	MRASRSSSSSGKQRRRHVLLRLILILFVVLFIVYVFPSPWAFHMGGKFSPLGEWDGYGRVRASNGGSYLLFT
Ga0318557_103450762	3300031795	Soil	MWSRKSAPQGEPRKRHVLLRIVLILVVVGLCVYILPTPWAFHMGGKFSPFGEWDGYGPVQASNGGRYLLYTHLSGGIVNDRGHAACSLTG
Ga0318576_101564371	3300031796	Soil	MRSRKSASQGEPGKRYVLLRIVLILVVVGLCVYILPSPWAFHMGGRFSPLGEWDGYGPVQASNGGRYLLYTHLRGGIVNNRGHAHCSLTGCTSLTGTAQLCTQGGQHY
Ga0318550_101456032	3300031797	Soil	MWASRKSASQDGPRRRYIWLRLLLILIVGLLAVYVLPTPWAFHMGGKFSALGEWDGYGPVQAGNGGHYLLYTHLRGGLANNHGHANCSFGGCDTL
Ga0318550_103787151	3300031797	Soil	MRASRKPASQDRPRRRYIWLRLLLILIVVLLAVYVLPTPWAFHMGGKFSALGEWDGYGPVQASNGGHYLLYTHLRGGLANNHGHASCSFGGCDTLTGTAQL
Ga0318523_101611902	3300031798	Soil	MWSRKSASQGEPRKRHVLLRIVLILVVVGLCVYILPTPWAFHMGGKFSPFGEWDGYGPVQASNGGRYLLYTHLSGGIVNDRGHAACS
Ga0318568_107930842	3300031819	Soil	MLASRKAAPKDGPGRRRIWLRLLLILIVVLLGLYVLPTPWAFHMGGRFSPVGEWDGYGAIQAG
Ga0318564_100871291	3300031831	Soil	MWASRKSAPQGQPRRRYLALRIVLILIVVALCVYILPAPWAFHMGGQFSPLAEWDGYGPVQASNGGHYLLYTHLGGGIVNDH
Ga0318564_104489322	3300031831	Soil	MWSRKSASQGEPRRRYLVLRIVLILVIAALCVYILPSPWAFHIGGKFSPFGEWDGYGPVQASSGGRYLLYTHLRGGLLNNHGQAGCKFTGCDTLTGTAQLCTQGGQH
Ga0318499_100889721	3300031832	Soil	MLASRKAAPKDGPGRRRIWLRLLLILIVVLLGLYVLPTPWAFHMGGRFSPVGEWDGYGAIQAGNGGHYLLYTHLRGDLANNHGHAGCSFVGCNVLSGTAQ
Ga0318544_101232242	3300031880	Soil	MWASRKSASEDRPRRRYLWLRVLLILIVALLAVYVLPTPWAFHMGGKFSALGEWDGYGPVQASNGGHYLLYTHLRGDLANNHGHAGCSFVGCNVLSGTAQLCT
Ga0318536_106728842	3300031893	Soil	MRSRKSASQGEPGKRYVLLRIVLILVVVGLCVYILPSPWAFHMGGRFSPLGEWDGYGPVQASNGGRYLLYTHLRGGIVNNRG
Ga0318551_105781171	3300031896	Soil	MWSRKSASQGEPRKRHVLLRIVLILVVVGLCVYILPTPWAFHMGGKFSPFGEWDGYGPVQASNGGRYLLYTHLSGGIVNDRGHAACSLTGCD
Ga0318551_106987111	3300031896	Soil	MRSRKSASQGEPGKRYVLLRIVLILVVVGLCVYILPSPWAFHMGGRFSPLGEWDGYGPVQ
Ga0318520_104953901	3300031897	Soil	MWASRKAASKDEPRRRYVWLRLLLILIVVLLAVYVLPTPWAFHMGGKFSPLGEWEGYGPVQVSNGGHYLLYAQLRGGI
Ga0306923_105519093	3300031910	Soil	MWASRRSAPQGQPRKRYIVLRLVLILIVGALCVYILPSPWAFHMGGTFSPLGEWDGYGPVQASNGGHYLLYTHLRGGIVNVHGQAGCSLTSCDSLVG
Ga0306921_114168312	3300031912	Soil	MWASRKAASKNEPRRRYVWLRLLLILIVVLLAVYVLPTPWAFHMGGKFSPLGEWEGYGPVQVSNGGHYLLYAQLRGGILNAHGHTGCSFPGCDTLVGSAQLCTQGGQHYTFSL
Ga0310916_111317231	3300031942	Soil	MWASRRSAPQGQPRKRYIVLRLVLILIVGALCVYILPSPWAFHMGGTFSPLGEWDGYGPVQASNGGHYLLYTHLRGGI
Ga0310909_103324843	3300031947	Soil	MWSRKSASQGEPRKRHLVLRIVLILVIVGLCVYILPTPWAFHMGGKFSPLGEWDG
Ga0318531_101641482	3300031981	Soil	MLASRKAAPKDGPGRRRIWLRLLLILIVVLLGLYVLPTPWAFHMGGRFSPVGEWDGYGAIQAGNGGHYLLYTH
Ga0318563_100442083	3300032009	Soil	MWASRKSASQDRPRRRYIWLRLLLILIVVLLAVYVLPTPWAFHMGGKFSPLGEWDGYGPVQASNGGHYL
Ga0318569_104375112	3300032010	Soil	MWSRKSASQGEPRKRHVLLRIVLILVVVGLCVYILPTPWAFHMGGKFSPFGEWDGYGPVQASNGGRYLLYTHLSGGIVNDRGHAACSLTGCDSLTGTAQLCT
Ga0318559_106013831	3300032039	Soil	MRSRKSASQGEPGKRYVLLRIVLILVVVGLCVYILPSPWAFHMGGRFSPLGEWDGYGPVQGGNGGRYLLYTHLRGGILNNHAQPGCSLTGCDTLTGSAQLC
Ga0318549_101246801	3300032041	Soil	MWASRRSAPQGQPRKRYIVLRLVLILIVGALCVYILPSPWAFHMGGTFSPLGEWDGYGPVQASNGGHYLLYTHLRGGIVNVHGQAGCS
Ga0318570_103406432	3300032054	Soil	MWASRRSAPQGQPRKRYIVLRLVLILIVGALCVYILPSPWAFHMGGTFSPLGEWDGYGPVQASNGGHYLLYTHLRGGIVNVHGQAGCSLTSCDSLVGSAQLCTQGGQRY
Ga0318575_106817651	3300032055	Soil	MWSRKSASQGEPRKRHLVLRIVLILVIVGLCVYILPTPWAFHMGGKFSPFGEWDGYGPVQASNGGRYLLYTHLRGGIVNDRGHAACSLTGCDSLIG
Ga0318533_104788872	3300032059	Soil	MWASRKSAPQGQPRRRYLALRIVLILIVVALCVYILPAPWAFHMGGQFSPLAEWDGYGPVQAG
Ga0318533_110397371	3300032059	Soil	MRASRKPASQDRPRRRYIWLRLLLILIVVLLAVYVLPTPWAFHMGGKFSALGEWDGYGPVQASNGGHYLLYT
Ga0318504_102029191	3300032063	Soil	MRSRKSASQGEPGKRYVLLRIVLILVVVGLCVYILPSPWAFHMGGRFSPLGEWDGYG
Ga0318504_102211211	3300032063	Soil	MWASRRSAPQGQPRKRYIVLRLVLILIVGALCVYILPSPWAFHMGGTFSPLGEWDGYGPVQA
Ga0318514_104392542	3300032066	Soil	MWASRKAASKNEPRRRYVWLRLLLILIVVLLAVYVLPTPWAFHMGGRFSPLGEWEGYGPVQVSNGGHYLLYTQLRGGILNAHGHTGCSFPGCD
Ga0318525_100232551	3300032089	Soil	MWASRKSAPQGQPRRRYLALRIVLILIVVALCVYILPAPWAFHMGGQFSPLAEWDGYGPVQA
Ga0318525_107001291	3300032089	Soil	MWSRKSASQGEPRKRHVLLRIVLILVVVGLCVYILPTPWAFHMGGKFSPFGEWDGYGPVQASNGGRYLLYTHLSGGIVNDRG
Ga0318577_102989651	3300032091	Soil	MRSRKSASQGEPGKRYVLLRIVLILVVVGLCVYILPSPWAFHMGGRFSPLGEWDGYGPVQASNGGRYLLYTHLRGGIVNNRGHAHCSLTGCTSLTG
Ga0307470_102519101	3300032174	Hardwood Forest Soil	MWSRKSASQGEPRKRHLLLRIVLILVIVGLCVYILPTPWAFHMGGKFSPVGEWDGYGPVQASNGGRYLLYTHLRGGVVNDRGHATCSLTGC
Ga0306920_1021182192	3300032261	Soil	MWSRKSASQGEPRKRHVLLRIVLILVVVGLCVYILPTPWAFHMGGKFSPFGEWDGYGPVQASNGGRYLLYTHL
Ga0318519_108463822	3300033290	Soil	MWRSRSSSSPGRPRRYILLRLILIAVVVLWAVYVLPSPWAYHMGGRFSPLGEWDGFGPVHASNGGNYLLFTHLRGGIVVNRGHAS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F072192

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences