Basic Information | |
---|---|
Family ID | F072029 |
Family Type | Metagenome / Metatranscriptome |
Number of Sequences | 121 |
Average Sequence Length | 44 residues |
Representative Sequence | VPSGGQTTVIQRILERRAQQLPTTHEETTATIAVMLRVVPP |
Number of Associated Samples | 101 |
Number of Associated Scaffolds | 121 |
Quality Assessment | |
---|---|
Transcriptomic Evidence | Yes |
Most common taxonomic group | Unclassified |
% of genes with valid RBS motifs | 100.00 % |
% of genes near scaffold ends (potentially truncated) | 19.01 % |
% of genes from short scaffolds (< 2000 bps) | 16.53 % |
Associated GOLD sequencing projects | 94 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.36 |
Hidden Markov Model |
---|
Powered by Skylign |
Most Common Taxonomy | |
---|---|
Group | Unclassified (80.992 % of family members) |
NCBI Taxonomy ID | N/A |
Taxonomy | N/A |
Most Common Ecosystem | |
---|---|
GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (38.017 % of family members) |
Environment Ontology (ENVO) | Unclassified (37.190 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Unclassified (41.322 % of family members) |
⦗Top⦘ |
⦗Top⦘ |
Predicted Topology & Secondary Structure | |||||
---|---|---|---|---|---|
Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 17.39% β-sheet: 0.00% Coil/Unstructured: 82.61% | Feature Viewer |
|
|||||
Powered by Feature Viewer |
Structure Viewer | |
---|---|
| |
Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.36 |
Powered by PDBe Molstar |
⦗Top⦘ |
Pfam ID | Name | % Frequency in 121 Family Scaffolds |
---|---|---|
PF00300 | His_Phos_1 | 59.50 |
PF00578 | AhpC-TSA | 9.92 |
PF01229 | Glyco_hydro_39 | 3.31 |
PF16691 | DUF5062 | 0.83 |
PF01909 | NTP_transf_2 | 0.83 |
PF06969 | HemN_C | 0.83 |
PF00589 | Phage_integrase | 0.83 |
PF01345 | DUF11 | 0.83 |
COG ID | Name | Functional Category | % Frequency in 121 Family Scaffolds |
---|---|---|---|
COG3664 | Beta-xylosidase | Carbohydrate transport and metabolism [G] | 3.31 |
COG0635 | Coproporphyrinogen-III oxidase HemN (oxygen-independent) or related Fe-S oxidoreductase | Coenzyme transport and metabolism [H] | 0.83 |
⦗Top⦘ |
Name | Rank | Taxonomy | Distribution |
Unclassified | root | N/A | 80.99 % |
All Organisms | root | All Organisms | 19.01 % |
Visualization |
---|
Powered by ApexCharts |
Scaffold | Taxonomy | Length | IMG/M Link |
---|---|---|---|
3300001593|JGI12635J15846_10169668 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria | 1475 | Open in IMG/M |
3300005587|Ga0066654_10149609 | All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes | 1184 | Open in IMG/M |
3300005843|Ga0068860_101065645 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria | 827 | Open in IMG/M |
3300006086|Ga0075019_10393927 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria | 846 | Open in IMG/M |
3300009553|Ga0105249_10762176 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria | 1030 | Open in IMG/M |
3300012205|Ga0137362_10270225 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria | 1470 | Open in IMG/M |
3300015052|Ga0137411_1380880 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria | 1034 | Open in IMG/M |
3300016341|Ga0182035_10705591 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria | 879 | Open in IMG/M |
3300017972|Ga0187781_10081395 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria | 2237 | Open in IMG/M |
3300021433|Ga0210391_11358002 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria | 547 | Open in IMG/M |
3300026310|Ga0209239_1364366 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria | 507 | Open in IMG/M |
3300026538|Ga0209056_10568227 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria | 575 | Open in IMG/M |
3300027869|Ga0209579_10290388 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria | 881 | Open in IMG/M |
3300027986|Ga0209168_10614314 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria | 519 | Open in IMG/M |
3300028879|Ga0302229_10017871 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 4019 | Open in IMG/M |
3300031232|Ga0302323_100794045 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria | 1040 | Open in IMG/M |
3300031234|Ga0302325_11932331 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria | 732 | Open in IMG/M |
3300031764|Ga0318535_10262288 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria | 773 | Open in IMG/M |
3300031764|Ga0318535_10397119 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria | 615 | Open in IMG/M |
3300031795|Ga0318557_10095899 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria | 1308 | Open in IMG/M |
3300032055|Ga0318575_10331144 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria | 771 | Open in IMG/M |
3300032066|Ga0318514_10531581 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria | 626 | Open in IMG/M |
3300032828|Ga0335080_10159182 | All Organisms → cellular organisms → Bacteria | 2498 | Open in IMG/M |
⦗Top⦘ |
Habitat | Taxonomy | Distribution |
Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 38.02% |
Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere | 6.61% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 5.79% |
Vadose Zone Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil | 4.96% |
Tropical Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil | 4.96% |
Soil | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil | 4.96% |
Surface Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil | 3.31% |
Tropical Peatland | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland | 3.31% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere | 3.31% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 2.48% |
Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil | 2.48% |
Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 2.48% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 2.48% |
Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil | 1.65% |
Hardwood Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil | 1.65% |
Palsa | Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa | 1.65% |
Corn Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere | 1.65% |
Watersheds | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds | 0.83% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 0.83% |
Grasslands Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil | 0.83% |
Grasslands Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil | 0.83% |
Corn Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere | 0.83% |
Agricultural Soil | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil | 0.83% |
Fen | Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen | 0.83% |
Populus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere | 0.83% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 0.83% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 0.83% |
Visualization |
---|
Powered by ApexCharts |
Taxon OID | Sample Name | Habitat Type | IMG/M Link |
---|---|---|---|
3300001546 | Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 | Environmental | Open in IMG/M |
3300001593 | Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2 | Environmental | Open in IMG/M |
3300005335 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG | Host-Associated | Open in IMG/M |
3300005355 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG | Host-Associated | Open in IMG/M |
3300005436 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG | Environmental | Open in IMG/M |
3300005467 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG | Environmental | Open in IMG/M |
3300005533 | Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 | Environmental | Open in IMG/M |
3300005587 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103 | Environmental | Open in IMG/M |
3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Host-Associated | Open in IMG/M |
3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Host-Associated | Open in IMG/M |
3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Host-Associated | Open in IMG/M |
3300006034 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105 | Environmental | Open in IMG/M |
3300006086 | Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 | Environmental | Open in IMG/M |
3300006903 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5 | Host-Associated | Open in IMG/M |
3300006953 | Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300009174 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG | Host-Associated | Open in IMG/M |
3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Host-Associated | Open in IMG/M |
3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Host-Associated | Open in IMG/M |
3300010048 | Tropical forest soil microbial communities from Panama - MetaG Plot_11 | Environmental | Open in IMG/M |
3300010325 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG | Environmental | Open in IMG/M |
3300010358 | Tropical forest soil microbial communities from Panama - MetaG Plot_3 | Environmental | Open in IMG/M |
3300010361 | Tropical forest soil microbial communities from Panama - MetaG Plot_23 | Environmental | Open in IMG/M |
3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Host-Associated | Open in IMG/M |
3300012203 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG | Environmental | Open in IMG/M |
3300012205 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG | Environmental | Open in IMG/M |
3300012349 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG | Environmental | Open in IMG/M |
3300012685 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG | Environmental | Open in IMG/M |
3300014968 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG | Host-Associated | Open in IMG/M |
3300015052 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (PacBio error correction) | Environmental | Open in IMG/M |
3300016270 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 | Environmental | Open in IMG/M |
3300016341 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 | Environmental | Open in IMG/M |
3300017972 | Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG | Environmental | Open in IMG/M |
3300017973 | Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG | Environmental | Open in IMG/M |
3300018062 | Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG | Environmental | Open in IMG/M |
3300021178 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M | Environmental | Open in IMG/M |
3300021403 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O | Environmental | Open in IMG/M |
3300021432 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M | Environmental | Open in IMG/M |
3300021433 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O | Environmental | Open in IMG/M |
3300021478 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M | Environmental | Open in IMG/M |
3300021559 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M | Environmental | Open in IMG/M |
3300021560 | Tropical forest soil microbial communities from Panama - MetaG Plot_4 | Environmental | Open in IMG/M |
3300025903 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025910 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) | Environmental | Open in IMG/M |
3300025911 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025912 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) | Environmental | Open in IMG/M |
3300025914 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025929 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) | Environmental | Open in IMG/M |
3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300026310 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes) | Environmental | Open in IMG/M |
3300026538 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes) | Environmental | Open in IMG/M |
3300027669 | Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M1 (SPAdes) | Environmental | Open in IMG/M |
3300027826 | Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes) | Environmental | Open in IMG/M |
3300027869 | Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes) | Environmental | Open in IMG/M |
3300027986 | Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes) | Environmental | Open in IMG/M |
3300028380 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300028536 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly) | Environmental | Open in IMG/M |
3300028879 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_3 | Environmental | Open in IMG/M |
3300031128 | Oak Summer Coassembly Site 11 - Champenoux / Amance forest | Environmental | Open in IMG/M |
3300031231 | Coassembly Site 11 (all samples) - Champenoux / Amance forest | Environmental | Open in IMG/M |
3300031232 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3 | Environmental | Open in IMG/M |
3300031234 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2 | Environmental | Open in IMG/M |
3300031543 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20 | Environmental | Open in IMG/M |
3300031544 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26 | Environmental | Open in IMG/M |
3300031546 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23 | Environmental | Open in IMG/M |
3300031640 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23 | Environmental | Open in IMG/M |
3300031719 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2) | Environmental | Open in IMG/M |
3300031720 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515 | Environmental | Open in IMG/M |
3300031744 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2) | Environmental | Open in IMG/M |
3300031748 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22 | Environmental | Open in IMG/M |
3300031751 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24 | Environmental | Open in IMG/M |
3300031763 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29 | Environmental | Open in IMG/M |
3300031764 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27 | Environmental | Open in IMG/M |
3300031765 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22 | Environmental | Open in IMG/M |
3300031769 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24 | Environmental | Open in IMG/M |
3300031778 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24 | Environmental | Open in IMG/M |
3300031781 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20 | Environmental | Open in IMG/M |
3300031792 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23 | Environmental | Open in IMG/M |
3300031795 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19 | Environmental | Open in IMG/M |
3300031796 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24 | Environmental | Open in IMG/M |
3300031797 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23 | Environmental | Open in IMG/M |
3300031798 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19 | Environmental | Open in IMG/M |
3300031799 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21 | Environmental | Open in IMG/M |
3300031821 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20 | Environmental | Open in IMG/M |
3300031835 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21 | Environmental | Open in IMG/M |
3300031879 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2) | Environmental | Open in IMG/M |
3300031912 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2) | Environmental | Open in IMG/M |
3300031941 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080 | Environmental | Open in IMG/M |
3300031946 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172 | Environmental | Open in IMG/M |
3300031962 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515 | Environmental | Open in IMG/M |
3300032035 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170 | Environmental | Open in IMG/M |
3300032042 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26 | Environmental | Open in IMG/M |
3300032052 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19 | Environmental | Open in IMG/M |
3300032055 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23 | Environmental | Open in IMG/M |
3300032063 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17 | Environmental | Open in IMG/M |
3300032066 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18 | Environmental | Open in IMG/M |
3300032067 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22 | Environmental | Open in IMG/M |
3300032090 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22 | Environmental | Open in IMG/M |
3300032783 | Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3 | Environmental | Open in IMG/M |
3300032828 | Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4 | Environmental | Open in IMG/M |
3300032892 | Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5 | Environmental | Open in IMG/M |
3300032895 | Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3 | Environmental | Open in IMG/M |
Geographical Distribution | |
---|---|
Zoom: | Powered by OpenStreetMap |
⦗Top⦘ |
Protein ID | Sample Taxon ID | Habitat | Sequence |
JGI12659J15293_100975742 | 3300001546 | Forest Soil | MSSGGQTTVIQRILERRAERPPANHEETTATIAVMLRVV |
JGI12635J15846_101696681 | 3300001593 | Forest Soil | MPAGGHTTVIQRILERRAARATVEETTATIAVMLRVVPPPRALLVCQDTGVRQQL |
Ga0070666_105053391 | 3300005335 | Switchgrass Rhizosphere | MRSGGQTTVIQRILERRAEKPPEIQEDTSATIAVMLRVVPPPRALLVFEN |
Ga0070671_1012512682 | 3300005355 | Switchgrass Rhizosphere | MRAGGQTTVIQRVLERRAQQPPAIQDDTSSTIAVMLRCLPPPR |
Ga0070713_1002232051 | 3300005436 | Corn, Switchgrass And Miscanthus Rhizosphere | MGLMGRGGQTTVIQRILERRAAKPATATEGTTATVAVMVRL |
Ga0070706_1006900172 | 3300005467 | Corn, Switchgrass And Miscanthus Rhizosphere | VPTGGQTTVIQRILERRAQQLPATHEETTATIAVMLRVVPP |
Ga0070734_106649032 | 3300005533 | Surface Soil | MPIGGQTTVIQRILERRAERPAEANEGTTATVAVML |
Ga0066654_101496091 | 3300005587 | Soil | MPAGGHTTVIQRILERRAARVSVEETTATIAVMLRVVPPPRALLVCQDAAVR |
Ga0068856_1016928022 | 3300005614 | Corn Rhizosphere | MRAGGQTTVIQRVLERRAQQPPAIQDDTSSTIAVMLRCLPPPRA |
Ga0068863_1015884571 | 3300005841 | Switchgrass Rhizosphere | MRAGGQTTVIQRVLERRAQQPPAIQDDTSSTIAVMLRCLP |
Ga0068860_1010656451 | 3300005843 | Switchgrass Rhizosphere | MTPRGGHTTVIQRILEKRAERPPVGEDTTETVAVMVRTLPPPKALLVCRDP |
Ga0066656_104583961 | 3300006034 | Soil | MPAGGHTTVIQRILERRAARVSVEETTATIAVMLRVV |
Ga0075019_103939271 | 3300006086 | Watersheds | MRTGGHTTVIQRILERRAGRPPATQEETTATIAVMLRVVPPSRALLVCQN |
Ga0075426_111119902 | 3300006903 | Populus Rhizosphere | MRTGGQTTVIKRVLERRAQKPPAIQDDTTATIAVML |
Ga0074063_100416383 | 3300006953 | Soil | VPTGGQTTVIQRILERRAERPPANSEETTASIAVMLRLVPPPRAL |
Ga0105241_114668192 | 3300009174 | Corn Rhizosphere | MRSGGQTTVIQRILERRAEKPPEIQEDTSATIAVMLRVVPPPRALLVFE |
Ga0105241_116218602 | 3300009174 | Corn Rhizosphere | MRTGGQTTVIQRILERRAEKPPEIQEDTSATIAVMLRVL |
Ga0105237_103365031 | 3300009545 | Corn Rhizosphere | MRSGGQTTVIQRILEKRAHTPPQLQEDTSATISVMLRVLPPPRTLLAFDEA |
Ga0105249_107621762 | 3300009553 | Switchgrass Rhizosphere | MRTGGQTTVIQRILERRAEKPPEIQEDTSATIAVMLRVVPPPRALLVFENES |
Ga0126373_121212072 | 3300010048 | Tropical Forest Soil | VPPGGQTTVIQRILERRAQRLPATQEETTATIAVML |
Ga0134064_100000691 | 3300010325 | Grasslands Soil | MRAGGHTTVIQRILERRAAEATPEETTATIAVMLRVM |
Ga0126370_117030572 | 3300010358 | Tropical Forest Soil | VASGGQTTVIQRILERRAARPPTSSEETTASIAVMLRVVPPP |
Ga0126378_109542981 | 3300010361 | Tropical Forest Soil | MRAGGQTTVIQRVLERRAQQPPTKEDDTSSTIAVMLRC |
Ga0126378_113313502 | 3300010361 | Tropical Forest Soil | MPQGGQTTVIQRILERRAQRPPAEHEETTATIAVMLRVVSPPKALLVCQ |
Ga0126378_118706652 | 3300010361 | Tropical Forest Soil | MAYGGQTTVIQRILERRAERPAEPHEGTTATLAVMLRVLL |
Ga0105239_132161691 | 3300010375 | Corn Rhizosphere | MRTGGQTTVIKRVLERRAQKPPAIQDDTTATIAVMLRVLPP |
Ga0105239_132461342 | 3300010375 | Corn Rhizosphere | MRSGGQTTVIQRILERRAEKPPEIQEDTSATIAVMLRVVPPTRALLVIENE |
Ga0137399_110931971 | 3300012203 | Vadose Zone Soil | MPAGGHTTVIQRILERRAARATVEETTATIAVMLRVMPPPRAL |
Ga0137362_102702251 | 3300012205 | Vadose Zone Soil | MPTGGHTTVIQRILERRAARASVEETTATIAVMLRVVPPPRALLVCQDPVVR |
Ga0137387_105760172 | 3300012349 | Vadose Zone Soil | MPAGGHTTVIQRILERRAARATVEETTATIAVMLRVLPPPRALLVCQDAVVREQLER |
Ga0137397_105551171 | 3300012685 | Vadose Zone Soil | MVPVRAGGQTTVIQRILDRRAQHPPAIQDDTTATIAVMLRVLPPPRAL |
Ga0157379_116504561 | 3300014968 | Switchgrass Rhizosphere | MRAGGQTTVIRRVLERRAQQPPTIQDDTSSTIAVMLR |
Ga0137411_13808801 | 3300015052 | Vadose Zone Soil | MPAGGHTTVIQRILERRAARATVDETTATIAVMLRVVPPPRALLVCQDAVVRQQL |
Ga0182036_110748831 | 3300016270 | Soil | VPSGGQTTVIQRILERRAQRPLDTNGETTATLAVMLRVVPPPKAL |
Ga0182035_107055911 | 3300016341 | Soil | VPSGGGQTTVIQRILERRAQRPPTAQEETTATIAVMLRVVPLPKALLVCHDS |
Ga0187781_100813954 | 3300017972 | Tropical Peatland | MPSGGQTTVIQRILERRTQRSRATREETTATIAVMLRVIAPPKALLVFHDPVV |
Ga0187781_101328581 | 3300017972 | Tropical Peatland | MASGGQTTVIQRILERRAQRPESSHEETTATIAVML |
Ga0187780_111198531 | 3300017973 | Tropical Peatland | MAHGGQTTVIQRILERRAERPAEAHEGTTATVAVML |
Ga0187784_106061222 | 3300018062 | Tropical Peatland | MPSGGQTTVIQRILERRTQRSRATREETTATIAVMLRVIAPP |
Ga0210408_107911331 | 3300021178 | Soil | MAAGGQTTVIQRILERRAERPPQNTEETTASIAVMLRVVPPPKALLVILDPVLRQQ |
Ga0210397_109650802 | 3300021403 | Soil | MPAGGHTTVIQRILERRAARATVDETTATIAVMLRVVPPPRALL |
Ga0210384_102588941 | 3300021432 | Soil | MAAGGQTTVIQRILERRAERPPQNTEETTASIAVMLRVVPPPKALLV |
Ga0210384_103839432 | 3300021432 | Soil | MRTGGQTTVIQRVLERRAQQPPTIEDDTSSTIAVM |
Ga0210391_113580021 | 3300021433 | Soil | MPIGGQTTVIQRILERRAERPAEANEGTTATVAVMLRVLPPPK |
Ga0210402_113532952 | 3300021478 | Soil | MAAGGQTTVIQRILERRAERPPQNTEETTASIAVMLRVVPP |
Ga0210409_101988444 | 3300021559 | Soil | MPTGGGHTTVIQRILERRAERLPASPTDTTGTIAVMLRVV |
Ga0210409_116226491 | 3300021559 | Soil | MAAGGQTTVIQRILERRAEGATPEETTATLAVMLRVVPPARA |
Ga0126371_121069972 | 3300021560 | Tropical Forest Soil | VPSGGQTTVIQRILERRAQQLPATHEETTATIAVMLRVVP |
Ga0207680_104032901 | 3300025903 | Switchgrass Rhizosphere | MRSGGQTTVIQRILEKRAQKPPEIQEDTSATIAVMLRVLPPPRAML |
Ga0207680_112060462 | 3300025903 | Switchgrass Rhizosphere | MRSGGQTTVIQRILERRAEKPPEIQEDTSATIAVML |
Ga0207684_107866211 | 3300025910 | Corn, Switchgrass And Miscanthus Rhizosphere | VPTGGQTTVIQRILERRAQQLPATHEETTATIAVMLRVVPPPKTLL |
Ga0207654_100391841 | 3300025911 | Corn Rhizosphere | MRSGGQTTVIQRILERRAEKPPEIQEDTSATIAVMLRVVP |
Ga0207707_111823821 | 3300025912 | Corn Rhizosphere | MRSGGQTTVIQRILERRAEKPPEIQEDTSATIAVM |
Ga0207671_102053681 | 3300025914 | Corn Rhizosphere | MRSGGQTTVIQRILEKRAHTPPQLQEDTSATISVMLRVLP |
Ga0207671_106527611 | 3300025914 | Corn Rhizosphere | VPTGGQTTVIQRILERRAERPPANSEETTASIAVMLRLVP |
Ga0207664_100933771 | 3300025929 | Agricultural Soil | VPSGGHTTVIQRILERRAQQLPTTHEETTATLAVMLRVVPPAKA |
Ga0207702_106086583 | 3300026078 | Corn Rhizosphere | VPSGGHTTVIQRILERRAQQLPTTHEETTATLAVML |
Ga0209239_13643661 | 3300026310 | Grasslands Soil | MPAGGHTTVIQRILERRAARASVEETTATIAVMLRVVPPPRALLVCQDAA |
Ga0209056_105682272 | 3300026538 | Soil | MPAGGHTTVIQRILERRAARATVEETTATIAVMLRVLPPPRALLVCQDAVVREQL |
Ga0208981_11506691 | 3300027669 | Forest Soil | MRSGGQTTVIQRILEKRAQKPPEIQEDTSATIAVMLRVLP |
Ga0209060_103327501 | 3300027826 | Surface Soil | MRTGGGQTTMVQRVLERRAAEPPVPHEGTTAATIAVMT |
Ga0209579_102903882 | 3300027869 | Surface Soil | MPTGGGHTTVIQRILERRAERLPAGTTETTGTIAVMLRVMPPPKALLICRDQ |
Ga0209168_106143142 | 3300027986 | Surface Soil | MPTGGGHTTVIQRILERRAERLPAGTTETTGTIAVMLRVMPPPKALLICRDQR |
Ga0268265_104184492 | 3300028380 | Switchgrass Rhizosphere | MRAGGQTTVIQRILERRAQKPPEIQEDTSATIAVMLRVLPPPRALVLVEN |
Ga0137415_107529922 | 3300028536 | Vadose Zone Soil | MRSGGQTTVIQRILEKRAQKPPEIQEDTSATIAVMLRVLPPP |
Ga0302229_100178716 | 3300028879 | Palsa | MAGGHTTMIQRVLERRAEKPPSSDEGTSATIAVMVRVLAP |
Ga0170823_130193571 | 3300031128 | Forest Soil | MAAGGQTTVIQRILERRAERPPQNTEETTASIAVM |
Ga0170824_1055792071 | 3300031231 | Forest Soil | MAAGGQTTVIQRILERRAERPPQNTEETTASIAVMLRVVPPPKAL |
Ga0302323_1007940452 | 3300031232 | Fen | MRSGGQTTVIQRILERRAEKPPEIHEDTSATIAVMLRVLPPPHALLVFADE |
Ga0302325_119323312 | 3300031234 | Palsa | MSPGGQTTVIQRILERRAERPPTTHEETTATIAVMLRVVPPPQALLVCHDAQLR |
Ga0318516_105708112 | 3300031543 | Soil | VPPGGQTTVIRRILERRSQQLPGTHEETTATIAVMLRVVAPPKALLVCQDPTLRR |
Ga0318534_100270055 | 3300031544 | Soil | VPQAGQTTVIRRILERRSQQLAGTHEETTATIAVML |
Ga0318534_101099115 | 3300031544 | Soil | VPSGGGQTTVIQRILERRAQRPPTAQEETTATIAVMLRVVPLPKAL |
Ga0318538_106620741 | 3300031546 | Soil | VPSGGGQTTVIQRILERRAQRPPTAQEETTATIAV |
Ga0318555_104705382 | 3300031640 | Soil | VPSGGQTTVIQRILERRAQQLPTTHEETTATIAVMLR |
Ga0306917_100912861 | 3300031719 | Soil | VPSGGQTTVIQRILERRAQQLPNTHEETTATIAVMLRV |
Ga0307469_104229643 | 3300031720 | Hardwood Forest Soil | MASGGHTTVIQRILERRAERPPTQEGTTATVAVMLRVV |
Ga0306918_104867823 | 3300031744 | Soil | VPSGGQTTVIQRILERRAQQLPNTHEETTATIAVMLR |
Ga0318492_107019581 | 3300031748 | Soil | VPSSGQTTVIQRILERRAQRLPSTHEETTATLAVMLRVVPPQ |
Ga0318494_100633481 | 3300031751 | Soil | VPSGGQTTVIQRILERRAQQLPNTHEETTATIAVML |
Ga0318537_102660832 | 3300031763 | Soil | VPSGGGQTTVIQRILERRAQRPPTAQEETTATIAVMLRV |
Ga0318535_102622881 | 3300031764 | Soil | VPQAGQTTVIRRILERRSQQLAGTHEETTATIAVMLRVVPPPKALLVCQD |
Ga0318535_103971191 | 3300031764 | Soil | VPSSGQTTVIQRILERRAQRLPSTHEETTATLAVMLRVVPPQKALLVCQDP |
Ga0318554_103080531 | 3300031765 | Soil | VPSGGQTTVIQRILERRAEHLRATPEETTASIAVMLRVVPPAKALLVCRDGELRGQ |
Ga0318526_103180582 | 3300031769 | Soil | VPSGGGQTTVIQRILERRAQRPPTAQEETTATIAVMLRVVPL |
Ga0318498_104589042 | 3300031778 | Soil | VPSSGQTTVIQRILERRAQRLPSTHEETTATLAVMLRVVPPQKALLVCQDPAL |
Ga0318547_101603343 | 3300031781 | Soil | VPQGGQTTVIQRILERRAQRLAVSHEETTASIGVMLRVVPPPKAMLM |
Ga0318529_102616112 | 3300031792 | Soil | VPSGGGQTTVIQRILERRAQRPPTAQEETTATIAVMLRVVPLPK |
Ga0318529_103726131 | 3300031792 | Soil | VPSGGQTTVIQRILERRAQQLPTTHEETTATIAVMLRVVPP |
Ga0318557_100958993 | 3300031795 | Soil | VPSGGQTTVIQRILERRAQQLPTTHEETTATIAVMLRVVPPPKALLVCQD |
Ga0318557_101289801 | 3300031795 | Soil | VPQAGQTTVIRRILERRSQQLAGTHEETTAAIAVM |
Ga0318576_100046087 | 3300031796 | Soil | VPSGGQTTVIQRILERRAQQLPTTHEETTATIAVML |
Ga0318550_102772691 | 3300031797 | Soil | VPSGGQTTVIQRILERRAQRLPSTHEETTATIAVMLRVVPPPTALLVCQDPPLRRQL |
Ga0318523_103362692 | 3300031798 | Soil | VPQAGQTTVIRRILERRSQQLAGTHEETTATIAVMLRVVPPPKALLE |
Ga0318565_101377683 | 3300031799 | Soil | VPSGGQTTVIQRILERRAQQLPTTHEETTATIAVM |
Ga0318565_104298931 | 3300031799 | Soil | VPSSGQTTVIQRILERRAQRLPSTHEETTATLAVMLRVVPPQKAL |
Ga0318567_103775882 | 3300031821 | Soil | VPSGGGQTTVIQRILERRAQRPPTAQEETTATIAVMLRVVPLPKALL |
Ga0318517_100139495 | 3300031835 | Soil | VPQAEQTTVIRRILERRSQQLAGTHEETTAAIAVMLRVLPPPKALLVC |
Ga0306919_101931504 | 3300031879 | Soil | VPQAGQTTVIRRILERRSQQLAGTHEETTATIAVMLRVLPPPKAL |
Ga0306919_112334652 | 3300031879 | Soil | VPSGGQTTVIQRILERRAQQLPNTHEETTATIAVMLRVVPPPKALL |
Ga0306921_122275532 | 3300031912 | Soil | VPPGGQTTVIRRILERRSQQLPGTHEETTATIAVMLRVVAP |
Ga0310912_101630391 | 3300031941 | Soil | VPSGGQTTVIQRILERRAQRLPSTHEETTATIAVMLRVVPPPTAL |
Ga0310910_101317515 | 3300031946 | Soil | VPSGGQTTVIQRILERRAQQLPNTHEETTATIAVMLRVVPPPKALLVCQ |
Ga0307479_105950411 | 3300031962 | Hardwood Forest Soil | MPTGGHTTVIQRILERRAERLPAGSTETTGTIAVML |
Ga0310911_105207432 | 3300032035 | Soil | VPQAGQTTVIRRILERRSQQLAGTHEETTATIAVMLR |
Ga0318545_101434312 | 3300032042 | Soil | VPQAGQTTVIRRILERRSQQLAGTHEETTAAIAVMLRVLP |
Ga0318506_102334422 | 3300032052 | Soil | VPSGGQTTVIQRILERRAEHLRATPEETTASIAVMLRVVPPAKALLVCRDGELRGQL |
Ga0318506_102757861 | 3300032052 | Soil | VPSGGQTTVIQRILERRAQQLPNTHEETTATIAVMLRVVPPPKALLVC |
Ga0318575_102247701 | 3300032055 | Soil | MSTRGGSVPQGGQTTVIQRILERRAQRLAVSHEETTASIGVML |
Ga0318575_103311442 | 3300032055 | Soil | VPPSGQTTVIQRILERRSQRLPSTHEETTATIAVMLRVVPPPKALLACQD |
Ga0318504_102560951 | 3300032063 | Soil | VPSGGQTTVIQRILERRAQQLPTTHEETTATIAVMLRVVPPPKALLVCQDPSL |
Ga0318504_104567152 | 3300032063 | Soil | VPPSGQTTVIQRILERRAQRPPTTHEETTATIAVMLRVVPPPKALLVCQD |
Ga0318514_105315812 | 3300032066 | Soil | VPQGGQTTVIQRILERRAQRLAVSHEETTASIGVMLRVVPPPKAMLMCERA |
Ga0318524_107966102 | 3300032067 | Soil | LTRTGGQTTVIQRILEKRAHKPPQVQEDTSSTIAVML |
Ga0318518_105825251 | 3300032090 | Soil | VPSGGQTTVIQRILERRAQRPLDTNGETTATLAVML |
Ga0335079_119379391 | 3300032783 | Soil | VAAGGQTTVIQRILERRAERPPANTEETTASIAVM |
Ga0335080_101591825 | 3300032828 | Soil | MPLGGQTTVIQRLLERRAERPAEAHEGTTATVAVMLRVLPA |
Ga0335080_106235823 | 3300032828 | Soil | VPSGGHTTVIQRILERRAHQLPTTHEETTATLAVMLRVVPP |
Ga0335081_102200737 | 3300032892 | Soil | MPSGGHTTVIQRILERRAERPAASQEGTTATVAVMLRVVPPPKALLVCADPNVRRLIEE |
Ga0335074_102972961 | 3300032895 | Soil | MRTGGQTTVIKRVLERRAQQPSAIQEDTTATIAVMLRVLPPPRALVA |
Ga0335074_104844501 | 3300032895 | Soil | MRTGGQTTVIKRVLERRAQQPSAIQEDTTATIAVMLRVLPPPRALVAI |
⦗Top⦘ |