Metagenome / Metatranscriptome Family F072027

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F072027
Family Type	Metagenome / Metatranscriptome
Number of Sequences	121
Average Sequence Length	69 residues
Representative Sequence	MQRAFPSATIEIGKSEASATGLTSIVARVEGVRSDIPPEGPLTRDLAVECQFDNNILTGFRWTAGPLH
Number of Associated Samples	83
Number of Associated Scaffolds	121

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	26.89 %
% of genes near scaffold ends (potentially truncated)	71.90 %
% of genes from short scaffolds (< 2000 bps)	82.64 %
Associated GOLD sequencing projects	75
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.62

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (97.521 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (39.669 % of family members)
Environment Ontology (ENVO)	Unclassified (63.636 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (51.240 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 39.58% Coil/Unstructured: 60.42%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.62
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.62
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 121 Family Scaffolds
PF04377	ATE_C	33.06
PF04376	ATE_N	28.10
PF00206	Lyase_1	3.31
PF00528	BPD_transp_1	1.65
PF08240	ADH_N	0.83
PF10397	ADSL_C	0.83
PF01842	ACT	0.83
PF01547	SBP_bac_1	0.83
PF10282	Lactonase	0.83
PF12556	CobS_N	0.83

COG ID	Name	Functional Category	% Frequency in 121 Family Scaffolds
COG2935	Arginyl-tRNA--protein-N-Asp/Glu arginylyltransferase	Posttranslational modification, protein turnover, chaperones [O]	61.16

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	97.52 %
Unclassified	root	N/A	2.48 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	97.52 %
Unclassified	root	N/A	2.48 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	97.52 %
Unclassified	root	N/A	2.48 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	97.52 %
Unclassified	root	N/A	2.48 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	88.43 %
Unclassified	root	N/A	2.48 %

Name	Rank	Taxonomy	Distribution
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	37.19 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	5.79 %
Unclassified	root	N/A	2.48 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.65 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	37.19 %
Unclassified	root	N/A	2.48 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.83 %
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	0.83 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.83 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	37.19 %
Unclassified	root	N/A	2.48 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.83 %
Rhodospirillales bacterium 69-11	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 69-11	0.83 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.83 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	37.19 %
Unclassified	root	N/A	2.48 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	0.83 %
Rhodospirillales bacterium 69-11	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 69-11	0.83 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004080\|Ga0062385_10736730	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	639	Open in IMG/M
3300004080\|Ga0062385_10739547	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	638	Open in IMG/M
3300004152\|Ga0062386_100031184	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	3956	Open in IMG/M
3300004152\|Ga0062386_100586766	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	910	Open in IMG/M
3300005332\|Ga0066388_107566349	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	545	Open in IMG/M
3300005363\|Ga0008090_15110572	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	530	Open in IMG/M
3300005764\|Ga0066903_102912078	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	928	Open in IMG/M
3300005764\|Ga0066903_105942971	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	640	Open in IMG/M
3300006904\|Ga0075424_101410533	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	740	Open in IMG/M
3300010048\|Ga0126373_10249107	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1747	Open in IMG/M
3300010048\|Ga0126373_11224949	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	817	Open in IMG/M
3300010048\|Ga0126373_13242250	Not Available	506	Open in IMG/M
3300010341\|Ga0074045_10049356	All Organisms → cellular organisms → Bacteria → Proteobacteria	3056	Open in IMG/M
3300010360\|Ga0126372_10366122	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1300	Open in IMG/M
3300010360\|Ga0126372_10643346	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1025	Open in IMG/M
3300010361\|Ga0126378_10065595	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3453	Open in IMG/M
3300010361\|Ga0126378_10539724	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1281	Open in IMG/M
3300010361\|Ga0126378_10558051	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1260	Open in IMG/M
3300010361\|Ga0126378_10738806	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1095	Open in IMG/M
3300010361\|Ga0126378_11798381	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	697	Open in IMG/M
3300010366\|Ga0126379_11609357	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	755	Open in IMG/M
3300010376\|Ga0126381_101297241	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1052	Open in IMG/M
3300010376\|Ga0126381_103023815	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	668	Open in IMG/M
3300016270\|Ga0182036_10097395	All Organisms → cellular organisms → Bacteria → Proteobacteria	1990	Open in IMG/M
3300016270\|Ga0182036_10230392	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1376	Open in IMG/M
3300016270\|Ga0182036_10700674	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	819	Open in IMG/M
3300016319\|Ga0182033_10046254	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2912	Open in IMG/M
3300016357\|Ga0182032_10114236	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1935	Open in IMG/M
3300016357\|Ga0182032_10432811	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1070	Open in IMG/M
3300016387\|Ga0182040_10095818	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2000	Open in IMG/M
3300016404\|Ga0182037_10043254	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2957	Open in IMG/M
3300016404\|Ga0182037_11185516	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	670	Open in IMG/M
3300016404\|Ga0182037_11298686	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	641	Open in IMG/M
3300016422\|Ga0182039_10772746	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	851	Open in IMG/M
3300016445\|Ga0182038_10712645	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	874	Open in IMG/M
3300016445\|Ga0182038_11432618	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	619	Open in IMG/M
3300016445\|Ga0182038_12021018	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	522	Open in IMG/M
3300017924\|Ga0187820_1088271	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	879	Open in IMG/M
3300017970\|Ga0187783_10194805	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1489	Open in IMG/M
3300017970\|Ga0187783_10686244	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	740	Open in IMG/M
3300020579\|Ga0210407_11152178	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	586	Open in IMG/M
3300021086\|Ga0179596_10657821	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	531	Open in IMG/M
3300021372\|Ga0213877_10032039	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1464	Open in IMG/M
3300021439\|Ga0213879_10012835	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1868	Open in IMG/M
3300021444\|Ga0213878_10142188	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	993	Open in IMG/M
3300021560\|Ga0126371_10044135	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	4240	Open in IMG/M
3300021560\|Ga0126371_10319796	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1682	Open in IMG/M
3300021560\|Ga0126371_11693555	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	756	Open in IMG/M
3300021560\|Ga0126371_13506337	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	529	Open in IMG/M
3300027729\|Ga0209248_10106954	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	843	Open in IMG/M
3300027783\|Ga0209448_10087462	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1045	Open in IMG/M
3300027812\|Ga0209656_10000010	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	142386	Open in IMG/M
3300031122\|Ga0170822_13139680	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	593	Open in IMG/M
3300031231\|Ga0170824_105679560	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2216	Open in IMG/M
3300031231\|Ga0170824_113293897	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	953	Open in IMG/M
3300031446\|Ga0170820_10225527	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	767	Open in IMG/M
3300031544\|Ga0318534_10111430	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1570	Open in IMG/M
3300031545\|Ga0318541_10115124	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1455	Open in IMG/M
3300031545\|Ga0318541_10140887	All Organisms → cellular organisms → Bacteria → Proteobacteria	1319	Open in IMG/M
3300031546\|Ga0318538_10000417	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	11575	Open in IMG/M
3300031561\|Ga0318528_10309091	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	848	Open in IMG/M
3300031572\|Ga0318515_10267556	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 69-11	917	Open in IMG/M
3300031572\|Ga0318515_10473222	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	669	Open in IMG/M
3300031668\|Ga0318542_10083908	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1514	Open in IMG/M
3300031713\|Ga0318496_10823862	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	511	Open in IMG/M
3300031719\|Ga0306917_11095456	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	620	Open in IMG/M
3300031719\|Ga0306917_11114521	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	614	Open in IMG/M
3300031724\|Ga0318500_10221151	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	912	Open in IMG/M
3300031744\|Ga0306918_10011482	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5041	Open in IMG/M
3300031744\|Ga0306918_11470946	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	521	Open in IMG/M
3300031747\|Ga0318502_10122811	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1460	Open in IMG/M
3300031747\|Ga0318502_10936941	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	527	Open in IMG/M
3300031751\|Ga0318494_10107179	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1546	Open in IMG/M
3300031763\|Ga0318537_10134350	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	920	Open in IMG/M
3300031765\|Ga0318554_10778689	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	535	Open in IMG/M
3300031771\|Ga0318546_10215644	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1314	Open in IMG/M
3300031771\|Ga0318546_10956594	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	603	Open in IMG/M
3300031777\|Ga0318543_10396439	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	619	Open in IMG/M
3300031778\|Ga0318498_10186741	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	941	Open in IMG/M
3300031782\|Ga0318552_10330187	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	776	Open in IMG/M
3300031792\|Ga0318529_10003685	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	5106	Open in IMG/M
3300031792\|Ga0318529_10121994	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1187	Open in IMG/M
3300031793\|Ga0318548_10126144	All Organisms → cellular organisms → Bacteria → Proteobacteria	1239	Open in IMG/M
3300031821\|Ga0318567_10796959	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	535	Open in IMG/M
3300031831\|Ga0318564_10318887	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	685	Open in IMG/M
3300031833\|Ga0310917_10178242	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1414	Open in IMG/M
3300031833\|Ga0310917_10347046	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1007	Open in IMG/M
3300031846\|Ga0318512_10243076	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	887	Open in IMG/M
3300031846\|Ga0318512_10721305	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	512	Open in IMG/M
3300031860\|Ga0318495_10383129	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	621	Open in IMG/M
3300031879\|Ga0306919_10631214	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	826	Open in IMG/M
3300031880\|Ga0318544_10127523	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	969	Open in IMG/M
3300031890\|Ga0306925_10112837	All Organisms → cellular organisms → Bacteria → Proteobacteria	2902	Open in IMG/M
3300031890\|Ga0306925_10351566	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1583	Open in IMG/M
3300031890\|Ga0306925_11175901	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	770	Open in IMG/M
3300031897\|Ga0318520_10234805	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1090	Open in IMG/M
3300031910\|Ga0306923_10035569	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5403	Open in IMG/M
3300031912\|Ga0306921_10121262	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3046	Open in IMG/M
3300031912\|Ga0306921_10156139	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2670	Open in IMG/M
3300031912\|Ga0306921_10635469	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1232	Open in IMG/M
3300031946\|Ga0310910_10716827	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	790	Open in IMG/M
3300031954\|Ga0306926_10115748	All Organisms → cellular organisms → Bacteria → Proteobacteria	3300	Open in IMG/M
3300031954\|Ga0306926_10149993	All Organisms → cellular organisms → Bacteria → Proteobacteria	2887	Open in IMG/M
3300031959\|Ga0318530_10240069	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	746	Open in IMG/M
3300032001\|Ga0306922_10210893	All Organisms → cellular organisms → Bacteria → Proteobacteria	2084	Open in IMG/M
3300032025\|Ga0318507_10146435	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1008	Open in IMG/M
3300032051\|Ga0318532_10026740	All Organisms → cellular organisms → Bacteria → Proteobacteria	1902	Open in IMG/M
3300032052\|Ga0318506_10303650	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	708	Open in IMG/M
3300032055\|Ga0318575_10339892	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	760	Open in IMG/M
3300032059\|Ga0318533_10926437	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	639	Open in IMG/M
3300032063\|Ga0318504_10160725	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1038	Open in IMG/M
3300032064\|Ga0318510_10128836	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	985	Open in IMG/M
3300032065\|Ga0318513_10044850	All Organisms → cellular organisms → Bacteria → Proteobacteria	1962	Open in IMG/M
3300032090\|Ga0318518_10491804	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	628	Open in IMG/M
3300032091\|Ga0318577_10635598	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	507	Open in IMG/M
3300032180\|Ga0307471_100350773	All Organisms → cellular organisms → Bacteria → Proteobacteria	1586	Open in IMG/M
3300032261\|Ga0306920_101945048	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	825	Open in IMG/M
3300033134\|Ga0335073_11039597	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	842	Open in IMG/M
3300033290\|Ga0318519_10207680	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1119	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.17%
Host-Associated	Host-Associated	0.83%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	92.56%
Aquatic	Environmental → Aquatic	6.61%
Plants	Host-Associated → Plants	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	92.56%
Freshwater	Environmental → Aquatic → Freshwater	6.61%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	86.78%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	6.61%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.31%
Loam	Environmental → Terrestrial → Soil → Loam	2.48%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	68.59%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.36%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	5.79%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.31%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.48%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.83%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	39.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	24.79%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	14.05%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	5.79%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	3.31%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	2.48%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.48%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.65%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.83%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.83%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.83%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.83%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.83%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021372	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R01	Environmental	Open in IMG/M
3300021439	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R03	Environmental	Open in IMG/M
3300021444	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R02	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300027729	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027783	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300031122	Oak Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062385_107367302	3300004080	Bog Forest Soil	CADIMQRAFPSATIEIGKSEAAATGLTTIVARVEGIRSDIPPEGPLRQDLAVECQFDSNILTGFRWTAGPLH*
Ga0062385_107395472	3300004080	Bog Forest Soil	CADIMQRAFPSATIEIGKSEASATGLTAIVARVEGVRSDIPPEGPLTHGLAVECQFDNNILTGFRWTAGPLH*
Ga0062386_1000311842	3300004152	Bog Forest Soil	MERAFPSADIEIGKSEASATSLTTIVARVEGVRSDMPAEGPLTRNLAVECQFDNNVLTGFHWTAGPLH*
Ga0062386_1005867661	3300004152	Bog Forest Soil	ADIMQRAFPSATIEIGKSEASAQGLTTIIARVEGVRSDIPPEGPLTRDLAVECQFDNNILSGFHWTAGPLH*
Ga0066388_1075663491	3300005332	Tropical Forest Soil	MQLAFPSAAIEIGKSEATATSLTTIVARVEGTRSDIPSDGPVMRNLAVECQFDNNILTAFRWTAGPLP*
Ga0008090_151105722	3300005363	Tropical Rainforest Soil	MMQRAFPSADIEIGKSDASATGLTTIVARVEGVRRDMPPDGPLRRDLAVECQFDNNILTGFRWTAGPL
Ga0066903_1029120781	3300005764	Tropical Forest Soil	IMQQAFPRATIEIGKSEATATSLTTIVLHVEGSRSDVPAEGPLTRDLAVECQFDSNVLTGFRWTAGPLH*
Ga0066903_1059429711	3300005764	Tropical Forest Soil	ARCGDIMQLAFPSAAIEIGKSEATATSLTTIVARVEGTRSDIPSDGPVMRNLAVECQFDNNILTAFRWTAGPLP*
Ga0075424_1014105332	3300006904	Populus Rhizosphere	PSAPIEITRSDASATSLTTIMARVDGVRTDMGENAPLRRDLAVECRFDENVLTGFRWTAGPLR*
Ga0126373_102491072	3300010048	Tropical Forest Soil	MQRAFPSASIEVGKSDASATGLTTIVAHVEGTRTDMPAGGPLTRDLAVECRFDDNILTGFRWTAGPEH*
Ga0126373_112249492	3300010048	Tropical Forest Soil	MQRAFPSATIEIGKSEASATGLTTIIARVKGVRSDIPPRGPLRRDLAVECQFDNNILTGFHWTAGPLH*
Ga0126373_132422502	3300010048	Tropical Forest Soil	VRHVGLAERCAEIIQLAFPSAAIEIGKSDAAATSLTTIVAHVEGTRTDMPAGGPLVRDLTVECRFDNN
Ga0074045_100493564	3300010341	Bog Forest Soil	CADIMQRAFPSATIEIGKSEASATGLTTIVARVDGVRSDLPPDAPLLHELAVECRFDDNILTGFRWTAGPLH*
Ga0126372_103661222	3300010360	Tropical Forest Soil	MQRAFPSATIEIGKSEASATGLTTIIARVEGVRSDIPPRGPLRRDLAVECQFDNNILTGFHWTAGPLH*
Ga0126372_106433462	3300010360	Tropical Forest Soil	CSITRNIGLAERCADVMQTAFPGATIDIGKSEASATGLTTIVARVEGVRSDMPPEGPLTRDLAVECQFDNNVLTGFRWTTGPLH*
Ga0126378_100655954	3300010361	Tropical Forest Soil	GVTRDVGLAGRCADIMLRAFPSADIEINKSEASATGLTTIVAHVEGFGTDMPAGGPLTRDLAVECQFDNNILTGFRWTAGPLH*
Ga0126378_105397242	3300010361	Tropical Forest Soil	MQRAFPSASIEVGESDASATGLTTIVAHVEGTRTDMPAGGPLTRDLAVECRFDDNILTGFRWTAGPEH*
Ga0126378_105580512	3300010361	Tropical Forest Soil	MLRAFPSANIEIGKSEAAATGLTTIIAHVEGVRTDMPPEGPLTRDLAVECQFDNNILTGFRWTAGPLH*
Ga0126378_107388061	3300010361	Tropical Forest Soil	MLRAFPSADIEIDKSEASATGLTTIVAHVEGVRTDMPAGGPLTRDLAVECQFDNNILTGFRWTAGPLH*
Ga0126378_117983811	3300010361	Tropical Forest Soil	MQLAFPSAAIEIDKSEATATSLTTIVARVEGTRSDTPSDGPVMRNLAVECQFDNNILTAFRWTAGPLP*
Ga0126379_116093572	3300010366	Tropical Forest Soil	MQRAFPSASIDIGKSEASATGLSTIIARVDGVRSDMPPDGPLAHDLAVECRFDDNILTGFRWTTGPLR*
Ga0126381_1012972412	3300010376	Tropical Forest Soil	MQRAFPSASIDIGKSEASATGLSTIIARVDGVRSDMPPDGPLAHDLAVECRFDDNILTGFRWTTGPLH*
Ga0126381_1030238152	3300010376	Tropical Forest Soil	MQRAFPNASIEVGESDASATGLTTIVAHVEGTRTDMPAGGPLTRDLAVECRFDDNILTGFRWTAGPEH*
Ga0182036_100973951	3300016270	Soil	IEIGKSEASATGLTTIVARVEGTRSDTPPEGPITRDLAVECQFDNSILTGFRWTAGPLH
Ga0182036_102303923	3300016270	Soil	GADIMESAFPSAEIEVGKSEASATGLTTIIAHVEGVRTDLPPEGPLTRDLAVECQFDNNIMTGFRWTAGPLR
Ga0182036_107006741	3300016270	Soil	MQRAFPNATIEIGKSEASATGLTTIVARVEGARSDIPPESPLTRDLAVECQFDNNILTGFRWTAGPLH
Ga0182033_100462542	3300016319	Soil	MQRAFPNATIEIGKSEASATGLTTIVARVDGARSDIPPESPLTRDLAVDCQFDNNILTGFRWTAGPLH
Ga0182032_101142362	3300016357	Soil	MQRAFPSASIEVGKSDASATGLTTIVAHVEGTRTDMPAGGPLTRDLAVECRFDDNILTGFHWTAGPEH
Ga0182032_104328112	3300016357	Soil	PSANIEFGKSEASATGLTTIIAHVEGVRTDMPLEGPLTRDLAVECQFDNNILTGFRWTAGPLH
Ga0182040_100958182	3300016387	Soil	MQRAFPSASIEVGKSDASATGLTTIVAHVEGTRTDMPAGGSLTRDLAVECRFDDNILTGFRWTAGPEH
Ga0182037_100432541	3300016404	Soil	MQRAFPSADIEIGKSDASATGLTTIVARVEGVRADMPPDVPLTRDLAVECQFDNNILTGFRWT
Ga0182037_111855161	3300016404	Soil	QRAFPSATIEIGKSEASATGLTTIIARVEGIRSDIPPEGPLRRDLAVERQFDNNILTGFRWTVGPLH
Ga0182037_112986862	3300016404	Soil	AFPSAEIEVGKSEASATGLTTIIAHVEGVRTDMPLDGPLTRDLAVECQFDNNILTGFRWTAGPLH
Ga0182039_107727462	3300016422	Soil	MQLAYPSATIEIGKSEASATGLTTITARVEGVRNDIPPAAPLTRDLAVECQFDNNILMSFRWTAGPLN
Ga0182038_107126451	3300016445	Soil	IGKSEASATGLTTIVARVVGVRGDMPPDGPLTRELAVECQFDNNILTGFRWTAGPLH
Ga0182038_114326182	3300016445	Soil	MQLAFPSAAIEIGKSEATATSLTTIVARVEGTRSETPSDGPVMRNLAVECQFDNNILTAFRWTAGPLP
Ga0182038_120210182	3300016445	Soil	GITRDVGLAGRCADIMLRAFPSANIEIGKSEASATGLTTIIARVQGVRTDIPPEGPLTRDLAVECQFDNNVLTGFRWTAGPLH
Ga0187820_10882712	3300017924	Freshwater Sediment	QRAFPTATIEIGKSEASATSLTTIVARVEGVRSDLPPDAPLVRELAVECRFDDNILTGFRWTAGPLH
Ga0187783_101948052	3300017970	Tropical Peatland	VRDVGLAERCADIMQRAFPSASIEIGKSEASATSLTTIVAHVEGTRTDMPAGGPLTHDLAVECRFDDSILTQFRWTAGPEH
Ga0187783_106862442	3300017970	Tropical Peatland	VGKSDASATGLTTIVAHVEGTRTDMPAGGPLTRDLAVECRFDDNILTGFRWTAGPEH
Ga0210407_111521782	3300020579	Soil	ADVMRRAYPSATIEITKSEAAATTLTTIIARVEGLRTDMPPDAPLRRDLAVECRFDENVLTAFRWTAGPIR
Ga0179596_106578212	3300021086	Vadose Zone Soil	ATIEITKSEAAATTLTTIIARVEGLRTDMPPDAPLRRDLAVECRFDENVLTAFRWTAGPI
Ga0213877_100320392	3300021372	Bulk Soil	VRNVGLAERCAEIMRLAYPSTAIEVGKSDAAATSLTTIVAHVEGTRTDMPAGGPLARDLAVECRFDNNILTGFRWTAGPEH
Ga0213879_100128351	3300021439	Bulk Soil	VRNVGLAERCAEIMRLAYPSTAIEVGKSDAAATSLTTIVAHVEGTRTDMPAGGPLARDLAVECRFDNNI
Ga0213878_101421882	3300021444	Bulk Soil	LAFPGAAIEIGKSDDAATSLTTIVAHVEGTRTDMPAGGPLVRDLAVECRFDNNILTGFRWTAGPEH
Ga0126371_100441353	3300021560	Tropical Forest Soil	MQLAFPSAAIEIGKSEAAATSLTTIVARVEGTRSDIPSDGPVMRNLAVECQFDNNILTAFRWTAGPLP
Ga0126371_103197962	3300021560	Tropical Forest Soil	MQRAFPSASIEVGESDASATGLTTIVAHVEGTRTDMPAGGPLTRDLAVECRFDDNILTGFRWTAGPEH
Ga0126371_116935552	3300021560	Tropical Forest Soil	MQLAFPSAAIEIGKSEATATSLTTIVARVEGTRSDIPSDGPVMRNLAVECQFDNNILTAFRWTAGPLP
Ga0126371_135063372	3300021560	Tropical Forest Soil	DIEIGKSDASATGLTTIVARVEGVRGDMPPGGPLKRDLGVECQFDNNILTGFRWTAGPLQ
Ga0209248_101069542	3300027729	Bog Forest Soil	IGKSEAAATGLTTIVARVEGIRSDIPPEGPLRQDLAVECQFDSNILTGFRWTAGPLH
Ga0209448_100874622	3300027783	Bog Forest Soil	LAGRCADIMQRAFPSATIEIGKSEASATGLTTIVARVEGARSDIPPEGPLTRDLAVECQFDNNILTGFRWTAGPLH
Ga0209656_1000001038	3300027812	Bog Forest Soil	MQRAFPSATIEIGKSEASATGLTAIVARVEGVRSDIPPEGPLTHGLAVECQFDNNILTGFRWTAGPLH
Ga0170822_131396801	3300031122	Forest Soil	MQLAFPSANIEIGKSEASATSLTTIVARVEGTRSSIPPEGPLMRNLAVECQFDNNILTAFRWTAGPLR
Ga0170824_1056795602	3300031231	Forest Soil	MQRAFPGATIDIGKSEASATGLTTIVARVEGVRSDMPPEGPLTRDLAVECQFDNNVLMGFRWTTGPLH
Ga0170824_1132938971	3300031231	Forest Soil	MQLAFPSANIEIGKSEASATSLTAIVARVEGIRTDTPPEGPLTRDLAVECQFDNNILTGFRWTAGPLH
Ga0170820_102255271	3300031446	Forest Soil	MQLAFPSANIEIGKSEASATSLTAIVARVEGIRTDTPPEGPLTRELAVECQFDNNILTGFRWTAGPLH
Ga0318534_101114302	3300031544	Soil	MQRAFPSAPIEIGKSEASATGLTSIVARVEGVRSDIPPEGPLTRDLAVECQFDNNILTGFRWTAGPLH
Ga0318541_101151242	3300031545	Soil	MQRAFPSATIEIGKSEASATGLTSIVARVEGVRSDIPPEGPLTRDLAVECQFDNNILTGFRWTAGP
Ga0318541_101408871	3300031545	Soil	RCGDIMQLAFPSAVIEIGKSEATATSLTTIVARVEGTRSDIPSDGPVMRNLAVECQFDNNILTAFRWTAGPLP
Ga0318538_100004179	3300031546	Soil	MQRAFPSATIEIGKSEASATGLTSIVARVEGVRSDIPPEGPLTRDLAVECQFDNNILTGFRWTAGPLH
Ga0318528_103090911	3300031561	Soil	MQRAYPSATIEIGKSEASATGLTTITARVEGVRNDIPPAAPLTRDLAVECQFDNNILMNFRWTAGPLH
Ga0318573_101481771	3300031564	Soil	SDASATGLTTIVARVEGVRADMPPDGPLTRDLAVECQFDNNILTGFRWIAGPLH
Ga0318515_102675562	3300031572	Soil	MQRAFPSADIEIGKSDASATGLTTIVARVEGVRADMPPDGPLTRDLAVECQFDNNILTGFRWTAGPLH
Ga0318515_104732222	3300031572	Soil	MQRAYPSATIEIGKSEASATGLTTITARVEGVRNDIPPAAPLTRDLAVECQFDNNILMSFRWTAGPLH
Ga0318542_100839083	3300031668	Soil	FPSADIQIGKSEASATGLTTIVARVEGVRGDIPPDGPLTRELAVECQFDNNILTGFRWTAGPLH
Ga0318496_108238622	3300031713	Soil	TIEIGKSEASATGLTTIIARVEGVRSDIPPQGPLRRDLAVECQFDNNILTGFHWTAGPLH
Ga0306917_110954561	3300031719	Soil	CGVTRDVGLSARCADIMERAFPSAEIKIGKSEASATGLTTITAHVEGVRTDLPPEGPLTRDLAVECQFDNNIMTGFRWTAGPLR
Ga0306917_111145212	3300031719	Soil	HDVGLAGRCADIMLRAFPSADIKIGKSEASATGLTTIIAHVEGVRTDMPLDGPLTRDLAVECQFDNNILTGFRWTAGPLH
Ga0318500_102211512	3300031724	Soil	IEIGKSEASATGLTTITARVEGVRNDIPPAAPLTRDLAVECQFDNNILMNFRWTAGPLH
Ga0306918_100114821	3300031744	Soil	MQRAFPNATIEIGKSEASATGLTTIVARVDGARSDIPPESPLTRDLAVECQFDNNILTGFRWTAGPLH
Ga0306918_114709462	3300031744	Soil	PHDVGLAGRCADIMQRAFPSAMIEIGKSEASATGLTTIVARVEGTRSDTPPEGPITRDLAVECQFDNSILTGFRWTAGPLH
Ga0318502_101228113	3300031747	Soil	IMQRAFPSATIEIGKSEASATGLTSIVARVEGVRSDIPPEGPLTRDLAVECQFDNNILTGFRWTAGPLH
Ga0318502_109369412	3300031747	Soil	IGLAERCADIMQRAFPSASIEVGKSDASATSLTTIMAHVEGTRTDIPAGGPLTLDLAVECRFDDNILTGFRWTAGPEH
Ga0318494_101071793	3300031751	Soil	GVSRDVGLAGRCADIMQRAFPSADIQIGKSEASATGLTTIVARVEGVRGDIPPDGPLTRELAVECQFDNNILTGFRWTAGPLH
Ga0318537_101343502	3300031763	Soil	LPGATIDIGKSEASATGLTTIVARVEGVRSDMPPEGPLTRDLAVECQFDNNVLTGFRWTTGPLH
Ga0318554_107786892	3300031765	Soil	ERCADIMQRAFPNATIEIGKSEASATGLTTIVARVDGARSDIPPESPLTRDLAVECQFDNNILTGFRWTAGPLH
Ga0318546_102156442	3300031771	Soil	DVGLAGRCADIMQRAFPSADIQIGKSEASATGLTTIVARVEGVRGDIPPDGPLTRELAVECQFDNNILTGFRWTAGPLH
Ga0318546_109565941	3300031771	Soil	PSATIEIGKSEASATGLTTITARVEGVRNDIPPAAPLTRDLAVECQFDNNILMNFRWTAGPLH
Ga0318543_103964392	3300031777	Soil	PSADIKIGKSEASATGLTTIIAHVEGVRTDMPLDGPLTRDLVVECQFDNNILTGFRWTAGPLH
Ga0318498_101867412	3300031778	Soil	FPSATIEIGKSEASATGLTSIVARVEGVRSDIPPEGPLTRDLAVECQFDNNILTGFRWTAGPLH
Ga0318498_104023411	3300031778	Soil	ASATGLTTIIAHVEGVRTDMPLDGPLTRDLAVECQFDNNILTGFRWTAGPLH
Ga0318552_103301872	3300031782	Soil	CADIMESAFPSAEIEVGKSEASATGLTTIIAHVEGVRTDLPPEGPLTRDLAVECQFDNNIMTGFRWTAGPLR
Ga0318529_100036856	3300031792	Soil	GRCADIMQRAFPSAPIEIGKSEASATGLTSIVARVEGVRSDIPPEGPLTRDLAVECQFDNNILTGFRWTAGPLH
Ga0318529_101219941	3300031792	Soil	MQRAFPSATIEIGKSEASATGLTTIIARVEGVRSDIPPQGPLRRDLAVECQFDNNILTGFHWTAGPLH
Ga0318548_101261441	3300031793	Soil	VGLAGRCADIMLRAFPSADIKIGKSEASATGLTTIIAHVEGVRTDMPLDGPLTRDLAVECQFDNNILTGFRWTAGPLH
Ga0318567_107969592	3300031821	Soil	VSRGVGLAARCADIMQRAFPSADIEIGKSDASATGLTTIVARVEGVRADMPPDGPLTRDLAVECQFDNNILTGFRWTAGPLH
Ga0318564_103188871	3300031831	Soil	CADIMQRAFPSADIQIGKSEASATGLTTIVARVEGVRGDIPPDGPLTRELAVECQFDNNILTGFRWTAGPLH
Ga0310917_101782423	3300031833	Soil	RDVGLAGRCADIMQRAFPSATIEIGKSEASATGLTTIIARVEGVRSDIPPEGPLRRDLAVECQFDNNILTGFHWTAGPLH
Ga0310917_103470461	3300031833	Soil	RAYPSGKIEIGKSEATATGLTTITARVEGVRNDIPPAAPLTRDLAVECQFDNNILMSFRWTAGPLN
Ga0318512_102430761	3300031846	Soil	TRDVGLAGRCADTMLHAFPSADIEINKSEASATGLTMIVAHVEGVRTDMPAGGPLTRDLAVECQFDNNILTGFRWTAGPLH
Ga0318512_107213051	3300031846	Soil	DIMQLAFPSAAIEIGKSEATATSLTTIVARVEGTRSDIPSDGSVMRNLAVECQFDNNILTAFRWTAGPLP
Ga0318495_103831292	3300031860	Soil	IPHDVGLAERCADIMQRAFPNATIEIGKSEASATGLTTIVARVDGARSDIPPESPLTRDLAVECQFDNNILTGFCWTAGPLH
Ga0306919_106312141	3300031879	Soil	GKSDASATGLTTIIARVQGVRTDIPPEGPLTRDLAVECQFDNNVLTGFRWTAGPLH
Ga0318544_101275231	3300031880	Soil	KIGKSEASATGLTTITAHVEGVRTDLPPEGPLTRDLAVECQFDNNIMTGFRWTAGPLR
Ga0306925_101128374	3300031890	Soil	IQIGKSEASATGLTTIVARVVGVRGDMPPDGPLTRELAVECQFENNILTGFRWTAGPLH
Ga0306925_103515661	3300031890	Soil	MQLAFPSAAIEIGKSEATATSLTTIVARVEGTRSDIPSDGPVMRNLAVECQFDNNILTAFRWTAGP
Ga0306925_111759011	3300031890	Soil	EVGKSDASATSLTTIMAHVEGTRTDIPAGGPLTLDLAVECRFDDNILTGFRWTAGPEH
Ga0318520_102348051	3300031897	Soil	MQRAYPSATIEIGKSEASATGLTTITARVEGVRNDIPPAAPLTRDLAVECQFDNNILMSFRWTAGPLN
Ga0306923_100355691	3300031910	Soil	GKSEASATGLTTIIAHVEGVRTDMPLDGPLTRDLAVECQFDNNILTGFRWTAGPLH
Ga0306921_101212621	3300031912	Soil	MQRAFPSASIEVGKSDASATGLTTIVAHVEGTRTDMPAGGPLTRDLAVECRFDDNILTGFRWTAGPEH
Ga0306921_101561394	3300031912	Soil	ERAFPSAEIKIGKSEASATGLTTITAHVEGVRTDLPPEGPLTRDLAVECQFDNNIMTGFRWTAGPLR
Ga0306921_106354691	3300031912	Soil	MQLAFPSAAIEIGKSEATATSLTTIVARVEGTRSETPSDGPVMRNLAVECQFDNNIL
Ga0310910_107168271	3300031946	Soil	TRDVGLAGRCADIMLRAFPSANIEIGKSEASATGLTTIIARVQGVRTDIPPEGPLTRDLAVECQFDNNVLTGFRWTAGPLH
Ga0306926_101157481	3300031954	Soil	FPSATIEIGKSEASATGLTTIIARVEGVRSDIPPQGPLRRDLAVECQFDNNILTGFHWTAGPLH
Ga0306926_101499931	3300031954	Soil	DVGLSARCADIMESAFPSAEIEVGKSEASATGLTTIIAHVEGVRTDLPPEGPLTRDLAVECQFDNNIMTGFRWTAGPLR
Ga0318530_102400692	3300031959	Soil	VDIMQRAFPSATIEIGKSEASATGLTTIIARVEGIRSDIPPEGPLRRDLAVERQFDNNILTGFRWTVGPLH
Ga0306922_102108933	3300032001	Soil	IEIGKSEASATGLTSIVARVEGVRSDIPPEGPLTRDLAVECQFDNNILTGFRWTAGPLH
Ga0318507_101464351	3300032025	Soil	CADIMQRAFPSADIEIGKSDASATGLTTIVARVEGVRADMPPDGPLTRDLAVECQFDNNILTGFRWTAGPLH
Ga0318532_100267401	3300032051	Soil	NIGLAERCADVMQRALPGATIDIGKSEASATGLTTIVARVEGVRSDMPPEGPLTRDLAVECQFDNNVLTGFRWTTGPLH
Ga0318506_103036501	3300032052	Soil	ACGIPHDVGLAERCADIMQRAFPNATIEIGKSEASATGLTTIVARVDGARSDIPPESPLTRDLAVECQFDNNILTGFRWTAGPLH
Ga0318575_103398921	3300032055	Soil	GATIDIGKSEASATGLTTIVARVEGVRSDMPPEGPLTRDLAVECQFDNNVLTGFRWTTGPLH
Ga0318533_109264372	3300032059	Soil	QLAFPSAAIEIGKSEATATSLTTIVARVEGTRSDIPSDGPVMRNLAVECQFDNNILTAFRWTAGPLP
Ga0318504_101607252	3300032063	Soil	VMQRAFPGATIDIGKSEASATGLTTIVARVEGVRSDMPPEGPLTRDLAVECQFDNNVLTGFRWTTGPLH
Ga0318510_101288361	3300032064	Soil	PHDVGLAERCADIMQRAFPNATIEIGKSEASATGLTTIVARVDGARSDIPPESPLTRDLAVECQFDNNILTGFRWTAGPLH
Ga0318513_100448501	3300032065	Soil	TIEIGKSEASATGLTTIIARVEGIRSDIPPEGPLRRDLAVERQFDNNILTGFRWTVGPLH
Ga0318518_104918041	3300032090	Soil	ERCADVMQRAFPGATIDIGKSEASATGLTTIVARVEGVRSDRPPEGPLTRDLAVECQFDNNVLTGFRWTTGPLH
Ga0318577_106355981	3300032091	Soil	DIMQRAFPSASIEVGKSDASATGLTTIVAHVEGTRTDMPAGGPLTRDLAVECRFDDNILTGFRWTVGPEH
Ga0307471_1003507733	3300032180	Hardwood Forest Soil	ATIEIGKTEASATSLTTIVARVEGTRSDMPAEGPLARNLAVECQFENNIMTGFRWTAGPL
Ga0306920_1019450482	3300032261	Soil	VRRHHAARLPSADIEIGKSEASATGLTTIVARVEGVRGDMPPDGPLTRELAVECQFDNNILTGFRWIAGPLH
Ga0335073_110395972	3300033134	Soil	MADRCADIMQRAFPDADIDITKREATAASLTTIVAHVEGVRSNLPPHGPLTRNLAVECRFDNSILTGFRWTAGPLQAAQRQQ
Ga0318519_102076801	3300033290	Soil	IMQRAYPSATIEIGKSEASATGLTTITARVEGVRNDIPPAAPLTRDLAVECQFDNNILMSFRWTAGPLH

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F072027

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences