Metagenome Family F071705

Basic Information
Family ID	F071705
Family Type	Metagenome
Number of Sequences	122
Average Sequence Length	46 residues
Representative Sequence	GMDYWRTPTIGYGTGGNNHEAGASNWYFPSDQWQEAVFTDIGGPQF
Number of Associated Samples	108
Number of Associated Scaffolds	122

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	11.48 %
% of genes near scaffold ends (potentially truncated)	74.59 %
% of genes from short scaffolds (< 2000 bps)	85.25 %
Associated GOLD sequencing projects	105
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.20

Most Common Taxonomy
Group	Bacteria (95.902 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (18.852 % of family members)
Environment Ontology (ENVO)	Unclassified (33.607 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (49.180 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 0.00% Coil/Unstructured: 100.00%
Feature Viewer

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Pfam ID	Name	% Frequency in 122 Family Scaffolds
PF01134	GIDA	41.80
PF13932	GIDA_C	5.74
PF03331	LpxC	4.10
PF00106	adh_short	3.28
PF00535	Glycos_transf_2	2.46
PF03070	TENA_THI-4	2.46
PF13462	Thioredoxin_4	1.64
PF02870	Methyltransf_1N	1.64
PF14518	Haem_oxygenas_2	1.64
PF02897	Peptidase_S9_N	1.64
PF02812	ELFV_dehydrog_N	0.82
PF02742	Fe_dep_repr_C	0.82
PF04023	FeoA	0.82
PF00664	ABC_membrane	0.82
PF07884	VKOR	0.82
PF07676	PD40	0.82
PF09723	Zn-ribbon_8	0.82
PF02678	Pirin	0.82
PF00291	PALP	0.82
PF12663	DUF3788	0.82
PF13506	Glyco_transf_21	0.82

COG ID	Name	Functional Category	% Frequency in 122 Family Scaffolds
COG0774	UDP-3-O-acyl-N-acetylglucosamine deacetylase	Cell wall/membrane/envelope biogenesis [M]	4.10
COG0350	DNA repair enzyme Ada (O6-methylguanine-DNA--protein-cysteine methyltransferase)	Replication, recombination and repair [L]	1.64
COG1505	Prolyl endopeptidase PreP, S9A serine peptidase family	Amino acid transport and metabolism [E]	1.64
COG1770	Protease II	Amino acid transport and metabolism [E]	1.64
COG0334	Glutamate dehydrogenase/leucine dehydrogenase	Amino acid transport and metabolism [E]	0.82
COG1321	Mn-dependent transcriptional regulator MntR, DtxR family	Transcription [K]	0.82
COG1741	Redox-sensitive bicupin YhaK, pirin superfamily	General function prediction only [R]	0.82
COG1918	Fe2+ transport protein FeoA	Inorganic ion transport and metabolism [P]	0.82
COG4243	Vitamin K epoxide reductase (VKOR) family protein, predicted involvement in disulfide bond formation	General function prediction only [R]	0.82

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.36 %
Unclassified	root	N/A	1.64 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.36 %
Unclassified	root	N/A	1.64 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	95.90 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	2.46 %
Unclassified	root	N/A	1.64 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	41.80 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	2.46 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.64 %
Unclassified	root	N/A	1.64 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.82 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	20.49 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	3.28 %
Metazoa	kingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa	2.46 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	1.64 %
Unclassified	root	N/A	1.64 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.82 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	20.49 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	2.46 %
Eumetazoa	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa	2.46 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1.64 %
Unclassified	root	N/A	1.64 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.82 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.82 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	20.49 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2.46 %
Bilateria	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria	2.46 %
Unclassified	root	N/A	1.64 %
Verrucomicrobia bacterium ADurb.Bin063	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium ADurb.Bin063	0.82 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	0.82 %
Gloeobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Gloeobacteria	0.82 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	20.49 %
Protostomia	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia	2.46 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1.64 %
Unclassified	root	N/A	1.64 %
Gloeobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Gloeobacteria → Gloeobacterales	0.82 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	0.82 %
Verrucomicrobia bacterium ADurb.Bin063	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium ADurb.Bin063	0.82 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	20.49 %
Ecdysozoa	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa	2.46 %
Unclassified	root	N/A	1.64 %
Gloeobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Gloeobacteria → Gloeobacterales → Gloeobacteraceae	0.82 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.82 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	0.82 %
Verrucomicrobia bacterium ADurb.Bin063	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium ADurb.Bin063	0.82 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	20.49 %
Nematoda	phylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda	2.46 %
Unclassified	root	N/A	1.64 %
Gloeobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Gloeobacteria → Gloeobacterales → Gloeobacteraceae → Gloeobacter	0.82 %
Candidatus Solibacter usitatus Ellin6076	isolate	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus → Candidatus Solibacter usitatus Ellin6076	0.82 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.82 %
Verrucomicrobia bacterium ADurb.Bin063	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium ADurb.Bin063	0.82 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	20.49 %
Enoplea	class	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Enoplea	2.46 %
Unclassified	root	N/A	1.64 %
Gloeobacter kilaueensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Gloeobacteria → Gloeobacterales → Gloeobacteraceae → Gloeobacter → Gloeobacter kilaueensis	0.82 %
Candidatus Solibacter usitatus Ellin6076	isolate	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus → Candidatus Solibacter usitatus Ellin6076	0.82 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.82 %
Verrucomicrobia bacterium ADurb.Bin063	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium ADurb.Bin063	0.82 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	20.49 %
Dorylaimia	subclass	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Enoplea → Dorylaimia	2.46 %
Unclassified	root	N/A	1.64 %
Gloeobacter kilaueensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Gloeobacteria → Gloeobacterales → Gloeobacteraceae → Gloeobacter → Gloeobacter kilaueensis	0.82 %
Candidatus Solibacter usitatus Ellin6076	isolate	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus → Candidatus Solibacter usitatus Ellin6076	0.82 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.82 %
Verrucomicrobia bacterium ADurb.Bin063	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium ADurb.Bin063	0.82 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	20.49 %
Trichinellida	order	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Enoplea → Dorylaimia → Trichinellida	2.46 %
Unclassified	root	N/A	1.64 %
Gloeobacter kilaueensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Gloeobacteria → Gloeobacterales → Gloeobacteraceae → Gloeobacter → Gloeobacter kilaueensis	0.82 %
Candidatus Solibacter usitatus Ellin6076	isolate	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus → Candidatus Solibacter usitatus Ellin6076	0.82 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.82 %
Verrucomicrobia bacterium ADurb.Bin063	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium ADurb.Bin063	0.82 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	20.49 %
Trichuridae	family	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Enoplea → Dorylaimia → Trichinellida → Trichuridae	2.46 %
Unclassified	root	N/A	1.64 %
Gloeobacter kilaueensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Gloeobacteria → Gloeobacterales → Gloeobacteraceae → Gloeobacter → Gloeobacter kilaueensis	0.82 %
Candidatus Solibacter usitatus Ellin6076	isolate	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus → Candidatus Solibacter usitatus Ellin6076	0.82 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.82 %
Verrucomicrobia bacterium ADurb.Bin063	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium ADurb.Bin063	0.82 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	20.49 %
Trichuris	genus	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Enoplea → Dorylaimia → Trichinellida → Trichuridae → Trichuris	2.46 %
Unclassified	root	N/A	1.64 %
Gloeobacter kilaueensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Gloeobacteria → Gloeobacterales → Gloeobacteraceae → Gloeobacter → Gloeobacter kilaueensis	0.82 %
Candidatus Solibacter usitatus Ellin6076	isolate	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus → Candidatus Solibacter usitatus Ellin6076	0.82 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.82 %
Verrucomicrobia bacterium ADurb.Bin063	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium ADurb.Bin063	0.82 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	20.49 %
Trichuris trichiura	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Enoplea → Dorylaimia → Trichinellida → Trichuridae → Trichuris → Trichuris trichiura	2.46 %
Unclassified	root	N/A	1.64 %
Gloeobacter kilaueensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Gloeobacteria → Gloeobacterales → Gloeobacteraceae → Gloeobacter → Gloeobacter kilaueensis	0.82 %
Candidatus Solibacter usitatus Ellin6076	isolate	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus → Candidatus Solibacter usitatus Ellin6076	0.82 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.82 %
Verrucomicrobia bacterium ADurb.Bin063	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium ADurb.Bin063	0.82 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001356\|JGI12269J14319_10078417	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1770	Open in IMG/M
3300001593\|JGI12635J15846_10155543	All Organisms → cellular organisms → Bacteria	1562	Open in IMG/M
3300003321\|soilH1_10058273	All Organisms → cellular organisms → Bacteria	1578	Open in IMG/M
3300003321\|soilH1_10247086	Not Available	1749	Open in IMG/M
3300003505\|JGIcombinedJ51221_10020817	All Organisms → cellular organisms → Bacteria	2298	Open in IMG/M
3300004153\|Ga0063455_100200897	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	986	Open in IMG/M
3300005162\|Ga0066814_10069587	All Organisms → cellular organisms → Bacteria	614	Open in IMG/M
3300005175\|Ga0066673_10488958	All Organisms → cellular organisms → Bacteria	725	Open in IMG/M
3300005328\|Ga0070676_11204255	All Organisms → cellular organisms → Bacteria	576	Open in IMG/M
3300005332\|Ga0066388_100718659	All Organisms → cellular organisms → Bacteria	1603	Open in IMG/M
3300005337\|Ga0070682_100516425	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	928	Open in IMG/M
3300005434\|Ga0070709_10914877	All Organisms → cellular organisms → Bacteria	694	Open in IMG/M
3300005435\|Ga0070714_100203191	All Organisms → cellular organisms → Bacteria	1813	Open in IMG/M
3300005445\|Ga0070708_100014227	All Organisms → cellular organisms → Bacteria	6538	Open in IMG/M
3300005537\|Ga0070730_10784021	All Organisms → cellular organisms → Bacteria	601	Open in IMG/M
3300005547\|Ga0070693_100220305	All Organisms → cellular organisms → Bacteria	1243	Open in IMG/M
3300005560\|Ga0066670_10487917	All Organisms → cellular organisms → Bacteria	758	Open in IMG/M
3300005598\|Ga0066706_11332060	All Organisms → cellular organisms → Bacteria	542	Open in IMG/M
3300005610\|Ga0070763_10347230	All Organisms → cellular organisms → Bacteria	825	Open in IMG/M
3300005614\|Ga0068856_100330398	All Organisms → cellular organisms → Bacteria	1542	Open in IMG/M
3300005712\|Ga0070764_10424886	All Organisms → cellular organisms → Bacteria	788	Open in IMG/M
3300005841\|Ga0068863_100600446	All Organisms → cellular organisms → Bacteria	1089	Open in IMG/M
3300005921\|Ga0070766_10623428	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Gloeobacteria → Gloeobacterales → Gloeobacteraceae → Gloeobacter → Gloeobacter kilaueensis	726	Open in IMG/M
3300005993\|Ga0080027_10092225	All Organisms → cellular organisms → Bacteria	1129	Open in IMG/M
3300006028\|Ga0070717_10555781	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1039	Open in IMG/M
3300006028\|Ga0070717_10830799	All Organisms → cellular organisms → Bacteria	841	Open in IMG/M
3300006046\|Ga0066652_100335305	All Organisms → cellular organisms → Bacteria	1356	Open in IMG/M
3300006046\|Ga0066652_101868456	All Organisms → cellular organisms → Bacteria → Acidobacteria	540	Open in IMG/M
3300006059\|Ga0075017_101086046	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	625	Open in IMG/M
3300006163\|Ga0070715_10209295	All Organisms → cellular organisms → Bacteria	996	Open in IMG/M
3300006176\|Ga0070765_101283867	All Organisms → cellular organisms → Bacteria	691	Open in IMG/M
3300006237\|Ga0097621_100027984	All Organisms → cellular organisms → Bacteria	4438	Open in IMG/M
3300006354\|Ga0075021_10113423	All Organisms → cellular organisms → Bacteria	1617	Open in IMG/M
3300006794\|Ga0066658_10445864	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	704	Open in IMG/M
3300006954\|Ga0079219_11538162	All Organisms → cellular organisms → Bacteria	605	Open in IMG/M
3300009012\|Ga0066710_103824796	All Organisms → cellular organisms → Bacteria	565	Open in IMG/M
3300009038\|Ga0099829_10030842	All Organisms → cellular organisms → Bacteria	3818	Open in IMG/M
3300009038\|Ga0099829_10056807	All Organisms → cellular organisms → Bacteria	2920	Open in IMG/M
3300009088\|Ga0099830_10954868	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	709	Open in IMG/M
3300009176\|Ga0105242_10119498	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Enoplea → Dorylaimia → Trichinellida → Trichuridae → Trichuris → Trichuris trichiura	2259	Open in IMG/M
3300009524\|Ga0116225_1084814	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1480	Open in IMG/M
3300009551\|Ga0105238_11911514	Not Available	626	Open in IMG/M
3300010321\|Ga0134067_10480861	All Organisms → cellular organisms → Bacteria	511	Open in IMG/M
3300010336\|Ga0134071_10188583	All Organisms → cellular organisms → Bacteria → Acidobacteria	1014	Open in IMG/M
3300010397\|Ga0134124_12057301	All Organisms → cellular organisms → Bacteria	609	Open in IMG/M
3300011269\|Ga0137392_10039268	All Organisms → cellular organisms → Bacteria → Acidobacteria	3495	Open in IMG/M
3300011269\|Ga0137392_10917826	All Organisms → cellular organisms → Bacteria → Acidobacteria	721	Open in IMG/M
3300011270\|Ga0137391_10023093	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	5149	Open in IMG/M
3300012019\|Ga0120139_1037199	All Organisms → cellular organisms → Bacteria	1139	Open in IMG/M
3300012096\|Ga0137389_10619543	All Organisms → cellular organisms → Bacteria	930	Open in IMG/M
3300012096\|Ga0137389_11391598	All Organisms → cellular organisms → Bacteria → Acidobacteria	597	Open in IMG/M
3300012199\|Ga0137383_10094278	All Organisms → cellular organisms → Bacteria	2171	Open in IMG/M
3300012199\|Ga0137383_10876131	All Organisms → cellular organisms → Bacteria	655	Open in IMG/M
3300012199\|Ga0137383_11009322	All Organisms → cellular organisms → Bacteria → Acidobacteria	606	Open in IMG/M
3300012206\|Ga0137380_10597558	All Organisms → cellular organisms → Bacteria → Acidobacteria	965	Open in IMG/M
3300012209\|Ga0137379_10298120	All Organisms → cellular organisms → Bacteria	1523	Open in IMG/M
3300012209\|Ga0137379_11571456	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	557	Open in IMG/M
3300012210\|Ga0137378_10614246	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	997	Open in IMG/M
3300012211\|Ga0137377_10219924	All Organisms → cellular organisms → Bacteria	1824	Open in IMG/M
3300012349\|Ga0137387_10787276	All Organisms → cellular organisms → Bacteria	688	Open in IMG/M
3300012351\|Ga0137386_10271334	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1220	Open in IMG/M
3300012362\|Ga0137361_10735683	All Organisms → cellular organisms → Bacteria	900	Open in IMG/M
3300012363\|Ga0137390_10925921	All Organisms → cellular organisms → Bacteria	826	Open in IMG/M
3300012917\|Ga0137395_10851330	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	660	Open in IMG/M
3300012957\|Ga0164303_10790049	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus → Candidatus Solibacter usitatus Ellin6076	651	Open in IMG/M
3300012975\|Ga0134110_10439092	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	585	Open in IMG/M
3300012989\|Ga0164305_11375131	All Organisms → cellular organisms → Bacteria → Acidobacteria	620	Open in IMG/M
3300013100\|Ga0157373_10626540	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	784	Open in IMG/M
3300015193\|Ga0167668_1029581	All Organisms → cellular organisms → Bacteria → Acidobacteria	1210	Open in IMG/M
3300015358\|Ga0134089_10079289	All Organisms → cellular organisms → Bacteria → Acidobacteria	1235	Open in IMG/M
3300017654\|Ga0134069_1029832	All Organisms → cellular organisms → Bacteria → Acidobacteria	1669	Open in IMG/M
3300017924\|Ga0187820_1079296	All Organisms → cellular organisms → Bacteria	922	Open in IMG/M
3300017943\|Ga0187819_10075634	All Organisms → cellular organisms → Bacteria → Acidobacteria	2007	Open in IMG/M
3300017943\|Ga0187819_10277571	All Organisms → cellular organisms → Bacteria	977	Open in IMG/M
3300018006\|Ga0187804_10379113	All Organisms → cellular organisms → Bacteria	624	Open in IMG/M
3300018043\|Ga0187887_10456286	All Organisms → cellular organisms → Bacteria	754	Open in IMG/M
3300018062\|Ga0187784_10019915	All Organisms → cellular organisms → Bacteria	5418	Open in IMG/M
3300018085\|Ga0187772_10720599	All Organisms → cellular organisms → Bacteria → Acidobacteria	716	Open in IMG/M
3300018431\|Ga0066655_10414546	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	889	Open in IMG/M
3300018431\|Ga0066655_10468096	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	833	Open in IMG/M
3300018433\|Ga0066667_11855453	All Organisms → cellular organisms → Bacteria	548	Open in IMG/M
3300019361\|Ga0173482_10274420	All Organisms → cellular organisms → Bacteria	729	Open in IMG/M
3300019888\|Ga0193751_1071533	All Organisms → cellular organisms → Bacteria	1415	Open in IMG/M
3300019890\|Ga0193728_1039496	All Organisms → cellular organisms → Bacteria	2324	Open in IMG/M
3300020580\|Ga0210403_10123565	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Enoplea → Dorylaimia → Trichinellida → Trichuridae → Trichuris → Trichuris trichiura	2108	Open in IMG/M
3300020580\|Ga0210403_11031792	All Organisms → cellular organisms → Bacteria	642	Open in IMG/M
3300020583\|Ga0210401_10100393	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Enoplea → Dorylaimia → Trichinellida → Trichuridae → Trichuris → Trichuris trichiura	2719	Open in IMG/M
3300020583\|Ga0210401_10858083	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	767	Open in IMG/M
3300021170\|Ga0210400_11677537	All Organisms → cellular organisms → Bacteria	500	Open in IMG/M
3300021178\|Ga0210408_10306069	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1267	Open in IMG/M
3300021180\|Ga0210396_10043537	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4126	Open in IMG/M
3300021181\|Ga0210388_10968951	All Organisms → cellular organisms → Bacteria	730	Open in IMG/M
3300021401\|Ga0210393_10386021	All Organisms → cellular organisms → Bacteria → Acidobacteria	1141	Open in IMG/M
3300021402\|Ga0210385_10463676	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	958	Open in IMG/M
3300021404\|Ga0210389_11052015	All Organisms → cellular organisms → Bacteria → Acidobacteria	630	Open in IMG/M
3300021432\|Ga0210384_10963943	All Organisms → cellular organisms → Bacteria	754	Open in IMG/M
3300021474\|Ga0210390_11103060	All Organisms → cellular organisms → Bacteria	644	Open in IMG/M
3300021478\|Ga0210402_10239128	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium ADurb.Bin063	1675	Open in IMG/M
3300021479\|Ga0210410_10080220	All Organisms → cellular organisms → Bacteria	2868	Open in IMG/M
3300025898\|Ga0207692_10078043	All Organisms → cellular organisms → Bacteria → Acidobacteria	1763	Open in IMG/M
3300025900\|Ga0207710_10011495	All Organisms → cellular organisms → Bacteria	3726	Open in IMG/M
3300025905\|Ga0207685_10560275	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	609	Open in IMG/M
3300025910\|Ga0207684_10803934	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	795	Open in IMG/M
3300025913\|Ga0207695_11129189	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	664	Open in IMG/M
3300026088\|Ga0207641_10564769	All Organisms → cellular organisms → Bacteria	1111	Open in IMG/M
3300026490\|Ga0257153_1092690	All Organisms → cellular organisms → Bacteria → Acidobacteria	602	Open in IMG/M
3300027110\|Ga0208488_1086952	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	501	Open in IMG/M
3300027641\|Ga0208827_1209566	All Organisms → cellular organisms → Bacteria → Acidobacteria	515	Open in IMG/M
3300027674\|Ga0209118_1095373	All Organisms → cellular organisms → Bacteria	843	Open in IMG/M
3300027842\|Ga0209580_10596427	All Organisms → cellular organisms → Bacteria → Acidobacteria	548	Open in IMG/M
3300027862\|Ga0209701_10221761	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1118	Open in IMG/M
3300027862\|Ga0209701_10228576	All Organisms → cellular organisms → Bacteria → Acidobacteria	1097	Open in IMG/M
3300028047\|Ga0209526_10554454	All Organisms → cellular organisms → Bacteria → Acidobacteria	742	Open in IMG/M
3300028379\|Ga0268266_12011308	All Organisms → cellular organisms → Bacteria	551	Open in IMG/M
3300030494\|Ga0310037_10012445	All Organisms → cellular organisms → Bacteria	4138	Open in IMG/M
3300031446\|Ga0170820_11164896	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	532	Open in IMG/M
3300031823\|Ga0307478_10715945	All Organisms → cellular organisms → Bacteria → Acidobacteria	838	Open in IMG/M
3300032074\|Ga0308173_10804307	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	865	Open in IMG/M
3300032205\|Ga0307472_102673113	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	510	Open in IMG/M
3300032805\|Ga0335078_10829323	All Organisms → cellular organisms → Bacteria	1122	Open in IMG/M
3300032955\|Ga0335076_11039426	All Organisms → cellular organisms → Bacteria	702	Open in IMG/M
3300033475\|Ga0310811_10671991	All Organisms → cellular organisms → Bacteria	1012	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	90.98%
Host-Associated	Host-Associated	9.02%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	85.25%
Plants	Host-Associated → Plants	9.02%
Aquatic	Environmental → Aquatic	5.74%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	85.25%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.74%
Freshwater	Environmental → Aquatic → Freshwater	4.10%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.46%
Sediment	Environmental → Aquatic → Sediment	1.64%
Roots	Host-Associated → Plants → Roots	0.82%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	62.30%
Loam	Environmental → Terrestrial → Soil → Loam	18.85%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.10%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.10%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.10%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.46%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.64%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.64%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.82%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	35.25%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	15.57%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.02%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.20%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.38%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.10%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	3.28%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.28%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.46%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.46%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.64%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.64%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.64%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.82%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.82%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.82%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.82%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.82%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	18.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	13.11%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.92%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	4.10%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.10%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.10%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	3.28%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	3.28%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.28%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.28%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.64%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.64%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	1.64%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.64%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.64%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.64%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.64%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.64%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.64%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.82%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.82%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.82%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.82%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.82%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.82%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.82%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.82%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.82%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.82%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.82%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.82%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.82%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.82%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001356	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300003321	Sugarcane bulk soil Sample H1	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300005162	Soil and rhizosphere microbial communities from Laval, Canada - mgLAB	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300005993	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012019	Permafrost microbial communities from Nunavut, Canada - A7_5cm_12M	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300015193	Arctic soil microbial communities from a glacier forefield, Rabots glacier, Tarfala, Sweden (Sample Rb6, proglacial stream)	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300019890	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026490	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-A	Environmental	Open in IMG/M
3300027110	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF001 (SPAdes)	Environmental	Open in IMG/M
3300027641	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG (SPAdes)	Environmental	Open in IMG/M
3300027674	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300030494	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300032074	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.20
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.20
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F071705

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12269J14319_100784173	3300001356	Peatlands Soil	PTIAYGPGGNNHEAGASNWYFPSDQWQEATFTDIGGPQF*
JGI12635J15846_101555432	3300001593	Forest Soil	SPTIPYGTGGNNHEAGASNWYFPSPDWQEASFTDVGGPQF*
soilH1_100582731	3300003321	Sugarcane Root And Bulk Soil	FDYWRDAHAQYGSGGNNHEAGASDWYFPSAEWQTAEFTDIPDGH*
soilH1_102470864	3300003321	Sugarcane Root And Bulk Soil	AGALLQVGFDYWRDAHSGYGSGGNNQEAGASDWYLPSDEWQTAEFTDSSARTDF*
JGIcombinedJ51221_100208173	3300003505	Forest Soil	MGMDYWRSSTVLYGPGGNNQEAGASNWYFPSAEWQEAIFTDFGGPQF*
Ga0063455_1002008973	3300004153	Soil	PPGRLAGCTAKARVKIGPGALLQMGFDYWRSASEPYGRGGNNHEAGASDWFFSSYGWQEAIFSDIGGSRF*
Ga0066814_100695871	3300005162	Soil	VRARVMISPGALLQMGMDYWRSPAIPYGSGGNNHEAGASHWYFPSPQWQEATFTDVGGPQF*
Ga0066673_104889582	3300005175	Soil	GMDYWRNPTVGYGSGGNNHEAGASDWYFPSSEWQDAVFSDIKP*
Ga0070676_112042552	3300005328	Miscanthus Rhizosphere	MDYWRSPTIAYGTGGNNREAGASNWYFPSPEWQEATFTDIGGPQF*
Ga0066388_1007186593	3300005332	Tropical Forest Soil	VKIGQGALLQMGSDYWRSTKATYGAGGNHHEAGASHWYFPSEAWQEAVFSGIGGPRF*
Ga0070682_1005164251	3300005337	Corn Rhizosphere	DYWRDAHTQYGSGGNNHEAGASDWYLPSDEWQTAEFTDIPDRR*
Ga0070709_109148771	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	LQMGMDYWRSPTVPYGSGGNNHEAGASDWYFPSPQWQEVSFTDVGGPQF*
Ga0070714_1002031911	3300005435	Agricultural Soil	VIVRARIASGALLQVGMDYWRNSAVGYGSGGNNHEAGASDWYFSSPDWQEA
Ga0070708_1000142274	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MDYWRHPTIGYGSGGNNHEAGASDWYFPSNEWQEAIFTEVGHH*
Ga0070730_107840212	3300005537	Surface Soil	VGFDYWRNSTIEYGPGGNNHEAGASDWYFPSPGWQEAKFSDIKR*
Ga0070693_1002203051	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	RARVMISPGALLQMGMDYWRSPTIPYGSGGNNHEAGASHWYFSSPQWQEVTFTDIGGPQF
Ga0066670_104879172	3300005560	Soil	LLQVGMDYWRNSTVGYGAGGNNHEAGASDWYFPSSDWQEATFTDVHPR*
Ga0066706_113320602	3300005598	Soil	VGYGSGGNNHEAGVSNWYFPSSQWQEAAFTDIGGPQF*
Ga0070763_103472302	3300005610	Soil	DYWRSPTIAYGPGGNNHEAGASNWYFPSEQWQEAVFTDIGGPQF*
Ga0068856_1003303981	3300005614	Corn Rhizosphere	IGFDYWRDRTVAYGSGGNNHEAGASDWYFPAPEWQEATFSDIKSSDIKR*
Ga0070764_104248861	3300005712	Soil	DYWRLPTIPYGLGGNNHEAGARNWYFPSGQWQEAVFTDIGGPQF*
Ga0068863_1006004461	3300005841	Switchgrass Rhizosphere	DYWRSASEPYGRGGNNHEAGASDWFFSSDGWQEAIFSDIGGLRF*
Ga0070766_106234281	3300005921	Soil	VRVSAGAWLQVGMDYWRSPTTYGNGGNNHEAGVSDWYFPSPDWQEASFTDVGGPQF*
Ga0080027_100922251	3300005993	Prmafrost Soil	SPGAMVQIGMDYWRSPTVPYGPGGNNHEAGASDWYFPSPEWQEATFTDIPETH*
Ga0070717_105557811	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MDYWRHPTIGYSSGGNNHEAGASDWYFPSNEWQEAIFTEVGHH*
Ga0070717_108307991	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	LQIGMDYWRNPKIGYGAGGNNHEAGASDWYFPSDQWQEAVFTDTK*
Ga0066652_1003353051	3300006046	Soil	AKARVKIGPGALLQVGFDYWRSASEPYGRGGNNHEAGASDWFFSSDGWQEAIFSDIGGSRF*
Ga0066652_1018684562	3300006046	Soil	TTGYGSGGNNHEAGASDWYFPSDQWQEAMFTDIKKN*
Ga0075017_1010860461	3300006059	Watersheds	DYWRSPTIPYGSGGNNHEAGASDWYLPSPQWQEVSFTDIGGPQF*
Ga0070715_102092951	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	LQIGFDYWRDPTVAYGSGGNNHEAGASDWYFPATDWQEATFSDIKRGSVR*
Ga0070765_1012838671	3300006176	Soil	LQVGMDYWRSPTTYGNGGNNHEAGVSDWYFPSPDWQEASFTDVGGPQF*
Ga0097621_1000279841	3300006237	Miscanthus Rhizosphere	FDYWRDPTIDYGSGGNNHEAGASNWYFPSDKWQEATFSDIKK*
Ga0075021_101134233	3300006354	Watersheds	LQMGMDYWRSPTIPYGSGGNNHEAGASDWYLPSPQWQEVSFTDIGGPQF*
Ga0066658_104458641	3300006794	Soil	LAGCTAKARVKIGPGALLQMGFDYWRSASEPYGRGGNNHEAGASDWFFSSYGWQEAIFSDIGGSRF*
Ga0079219_115381622	3300006954	Agricultural Soil	MQLSGALLQIGMDYWRNSAVGYVSGGNNHEAGASDWYSPSPHWQDATFTDAPA*
Ga0066710_1038247961	3300009012	Grasslands Soil	YWRNPTAGYGSGENNHEAGVSNWYFPSSQWQEATSTDIGGPQF
Ga0099829_100308424	3300009038	Vadose Zone Soil	MDYWRHPTIGYGSGGNNHEAGASDWYFPSNDWQEAIFTDVGHH*
Ga0099829_100568073	3300009038	Vadose Zone Soil	MGMDYCRNPTIGFGSGGNNHEAGASQWYFLSDDWQEAIFTDINP*
Ga0099830_109548682	3300009088	Vadose Zone Soil	MDYWRNPTIGYGSGGNNHEAGASDWYFPSNDWQEAIFTDVGHH*
Ga0105242_101194982	3300009176	Miscanthus Rhizosphere	PAIPYGSGGNNHEAGASHWYFPSPQWQEATFTDVGGPQF*
Ga0116225_10848142	3300009524	Peatlands Soil	MGMDYWRTPTIGYGPGGNNHEAGASNWYFPSDQWQEATFTDIGGPQF*
Ga0105238_119115141	3300009551	Corn Rhizosphere	QVGFDYWRDANADYGSGGNNHEAGASEWYLPSEEWQTAEFTDIRDPN*
Ga0134067_104808612	3300010321	Grasslands Soil	ALLQIGLDYWRNSTVGYGTGGNNHEAGASDWYFPSPDWQEATFTDVPKVK*
Ga0134071_101885831	3300010336	Grasslands Soil	PTAGYGSGENNHEAGASNWYFPSSQWQEAAFTDIGGPQF*
Ga0134124_120573012	3300010397	Terrestrial Soil	AYGTGGNNREAGASNWYFPSPEWQYATFTDIGGPQF*
Ga0137392_100392683	3300011269	Vadose Zone Soil	MGMDYCRNPTIGFGSGGNNHEAGASQWYFLSDDWEEAIFTDINP*
Ga0137392_109178262	3300011269	Vadose Zone Soil	MGMDYWRNPTIGFGSGGNNHEAGASEWYFPSDDWQEAIFTHIKP*
Ga0137391_100230935	3300011270	Vadose Zone Soil	RHPTIGYGSGGNNHEAGASDWYFPSNDWQEAIFTDVGHH*
Ga0120139_10371992	3300012019	Permafrost	MGMDYWRNPTIGYGSGAGASDWYFPSNDWQDAVFTDIRYH*
Ga0137389_106195431	3300012096	Vadose Zone Soil	RVRISAGALLQVGMDYWRSPTVPYGSGGNNHEAGASDWYFPSPQWQEVSFTDIGGPQF*
Ga0137389_113915981	3300012096	Vadose Zone Soil	MGMDYWRNPTIGFGSGGNNHEAGASNWYLPSKDWQEAVFTDVHH*
Ga0137383_100942783	3300012199	Vadose Zone Soil	MGMDYWRNPTIGFGSGGNNHEAGASQWYFPSDDWQEAIFTDINP*
Ga0137383_108761311	3300012199	Vadose Zone Soil	TAGYGSGENNHEAGASNWYFPSSQWQEATFTDIGGQKF*
Ga0137383_110093221	3300012199	Vadose Zone Soil	VGIDYWRHPPIGYGSGGNNHEAGASDWYFPSHEWQEAVFTDAPKRP*
Ga0137380_105975581	3300012206	Vadose Zone Soil	MGMDYWRNPTIGYGSGGNNHEAGASDWYFPSGEWQEAVFTDIK*
Ga0137379_102981201	3300012209	Vadose Zone Soil	MDYWRNPTIGYGSGGNNHEAGASDWYFPSGEWQEAVFTDIK*
Ga0137379_115714561	3300012209	Vadose Zone Soil	MDYWRHPTIGYGSGGNNHQAGASDWYFPSNDWQEAIFTDVGHH*
Ga0137378_106142462	3300012210	Vadose Zone Soil	VGIDYWRHPTIGYGSGGNNHQAGASDWYFPSNDWQEAIFTDVGHH*
Ga0137377_102199241	3300012211	Vadose Zone Soil	MGMDYCRNPTIGFGSGGNNHEAGASQWYFPSDDWQEAIFTDINP*
Ga0137387_107872762	3300012349	Vadose Zone Soil	PTATYGTGGNNHEAGASDWYFPSDQWQDAVFTDAPKEP*
Ga0137386_102713343	3300012351	Vadose Zone Soil	LLQVGMDYWRNPTATYGTGGNNHEAGASDWYFPSDQWQDAVFTDAPKEP*
Ga0137361_107356831	3300012362	Vadose Zone Soil	VGIDYWRHPTIGYGSGGNNHEAGASDWYFPSNDWQEAIFTDVGHH*
Ga0137390_109259212	3300012363	Vadose Zone Soil	MGMDYWRNPTIGFGSGGNNHEAGASEWYFPSDDWQEAIFTDIKP*
Ga0137395_108513301	3300012917	Vadose Zone Soil	LLQIGFDYWRDPTVAYGSGGNNHEAGASDWYFPAPEWQEATFSDIKR*
Ga0164303_107900491	3300012957	Soil	WRNATIGYGTGGNNHEAGASDWYVASGRWQEAEFSDVRR*
Ga0134110_104390922	3300012975	Grasslands Soil	SSGALLQVGMDYWRNSSVGYGAGGNNHEAGASDWYFPSSSWQEAMFTDVREAK*
Ga0164305_113751311	3300012989	Soil	GLLQLGFDYWRSPSVPYGPGGNNQEAGASDWYLPSGQWQEAVFTDIGGPQF*
Ga0157373_106265402	3300013100	Corn Rhizosphere	SSAAMLQVGMDYWRNSTVGYGSGGNNHEAGASDWYFPSSDWQEATFTDIPRIN*
Ga0167668_10295811	3300015193	Glacier Forefield Soil	WRSSTVPYGAGGNNHEAGASNWYFPSPQWQDAVFTDLPGLQF*
Ga0134089_100792893	3300015358	Grasslands Soil	VGYGSGGNNHEAGVSNWYFPSSQWQEATFTGIGGPQF*
Ga0134069_10298321	3300017654	Grasslands Soil	PTAGYGSGENNHEAGASNWYFPSSQWQEAAFTDIGGPQF
Ga0187820_10792962	3300017924	Freshwater Sediment	LLQVGMDYWRSPTVPFGAGGNNHEAGASDWYFSSPRWQEVSFTDMGGPQF
Ga0187819_100756341	3300017943	Freshwater Sediment	ALLQMGMDYWRNTTVEYGSGGNNHEAGASNWYLPSERWQEAIFTDIGGPRF
Ga0187819_102775711	3300017943	Freshwater Sediment	ALLQMGMDYWRNTTVEYGSGGNNHEAGASNWYLPSERWQEAMFTDIGGPQF
Ga0187804_103791132	3300018006	Freshwater Sediment	YWRNATLPYARGNNHEAGASNWYFPSERWQEGVFTDIGGVRF
Ga0187887_104562861	3300018043	Peatland	GMDYWRTPTIGYGTGGNNHEAGASNWYFPSDQWQEAVFTDIGGPQF
Ga0187784_100199151	3300018062	Tropical Peatland	GALLQVGMDYWRDPTAPFGHGGNNHEAGASDWYFPSDQWQEAVFSDIRDFKF
Ga0187772_107205991	3300018085	Tropical Peatland	LLQMGMDDWRNATVEYGSGGNNHEAGASNWYFPSERWQEAWFTDVGGPRF
Ga0066655_104145461	3300018431	Grasslands Soil	LQVGFDYWRNPTVGYGSGGNNHEAGASRWYFPSAKWQEVEFTDVHH
Ga0066655_104680961	3300018431	Grasslands Soil	ARISKGALLQIGFDYWRDPTTGYGSGGNNHEAGASDWYFPSDQWQEAMFTDIKQN
Ga0066667_118554531	3300018433	Grasslands Soil	TVGYGSGGNNHEAGVSNWYFPSSQWQEAAFTDIGGPQF
Ga0173482_102744201	3300019361	Soil	LLQMGMDYWRSPTIPYGSGGNNHEAGASRWYFPSPQWQEVTFTDIGGSQF
Ga0193751_10715332	3300019888	Soil	MGMDYCNPTIGAGASDWYFPSNDWQDAVFTDIGYH
Ga0193728_10394963	3300019890	Soil	VGNPTIGYGSGGNDHEAGASDWYFPSTDCQDAVFTDVGHH
Ga0210403_101235651	3300020580	Soil	PTVPFGSGGNNHEAGASNWYFPSDKWQDAVFSDIGGPQL
Ga0210403_110317922	3300020580	Soil	VDYWRSPTIAYGPGGNNHEAGASNWYFASDQWQEAVFTDIGGPQF
Ga0210401_101003931	3300020583	Soil	TIPYRLGGNNHEAGARNWYFPSAQCQEVVFTDIGGPQS
Ga0210401_108580831	3300020583	Soil	DYWRSPTIAYGPGGNNHEAGASNWYFASDQWQEAVFTDIGGQQF
Ga0210400_116775371	3300021170	Soil	MGMDYWRSATVPHGAGGNNHETGAGNWCFPSSEWQEARFTDVGGVQF
Ga0210408_103060691	3300021178	Soil	STIPYGSGGNNHEAGASDWYFSSPQWQEVSFTDIGGSQF
Ga0210396_100435375	3300021180	Soil	DYWRTPTIAYGRGGNNHEAGASNWYFPSDQWQEATFTDIGGPQF
Ga0210388_109689511	3300021181	Soil	ALLQMGMDYWRNPTIEYRPGDSHEAGASNWYFPSERWQEAEFTDIGGVRF
Ga0210393_103860212	3300021401	Soil	TAKVKISRGALLQMGMDYWRNPTIGYGPGGNNYEAGASSWYFPSKNWQQAVFTDMKTH
Ga0210385_104636761	3300021402	Soil	WRNPTIGYGPGGNNHEAGASNWYFPSNQWQEATFTDIGGPQF
Ga0210389_110520152	3300021404	Soil	TIAYGLGGNNHEAGASNWYFASPQWQEAIFTDIGGPQF
Ga0210384_109639431	3300021432	Soil	YWRNPTIAYGVGDSHEAGASNWYFPSERWQEAEFTDIGGVKF
Ga0210390_111030602	3300021474	Soil	SPTIPYRLGGNNHEAGARNWYFPSAQCQEAVFTDIGGPQS
Ga0210402_102391282	3300021478	Soil	RSATVPYGKGGNNHEAGASNWYFPSPVWQEATFTDIGGPQF
Ga0210410_100802202	3300021479	Soil	MDYWRSSTIPYGSGGNNHEAGASDWYFSSPQWQEVSFTDIGGSQF
Ga0207692_100780431	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	TIVYESGGNNHEAGASDWYFPSHQWQEAVFTDIKQN
Ga0207710_100114954	3300025900	Switchgrass Rhizosphere	VMISPGALLQMGMDYWRSPTIPYGSGGNNHEAGASRWYFPSPKWQEVTFTDIGGSQF
Ga0207685_105602751	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	PTIPYGSGGNNREAGASNWYFPSPEWQEATFTDIGGRQF
Ga0207684_108039342	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MDYWRNPSIGYGSGGNNHEAGASDWYFPSDRWQEAIFTDTPNAH
Ga0207695_111291891	3300025913	Corn Rhizosphere	IAYGTGGNNREAGASNWYFPSPEWQDATFTDIGGPQF
Ga0207641_105647691	3300026088	Switchgrass Rhizosphere	DYWRSASEPYGRGGNNHEAGASDWFFSSDGWQEAIFSDIGGLRF
Ga0257153_10926901	3300026490	Soil	GALLQMGMDYWRNPTIGFGSGGNNHEAGVSRWYFPSDEWQEAMFTDINP
Ga0208488_10869522	3300027110	Forest Soil	PTIAYGPGGNNHEAGASNWYFPSEQWQEAVFTDIGGPQF
Ga0208827_12095662	3300027641	Peatlands Soil	GMDYWRTPTVAYASGGNNHEAGASNWYFPSDQWQEATFTDIGGPQF
Ga0209118_10953732	3300027674	Forest Soil	SQAGIDYWRCPAVPYGSGGNNPEAGASDWYFPSPQWQEASFTGAGGPQF
Ga0209580_105964272	3300027842	Surface Soil	IGYGPGGNNHEAGASNWYFASGQWQEAAFTDIGGPQF
Ga0209701_102217612	3300027862	Vadose Zone Soil	MDYWRNPTIGYGSGGNNHEAGASDWYFPSNDWQEAIFTDVGHH
Ga0209701_102285763	3300027862	Vadose Zone Soil	MGMDYCRNPTIGFGSGGNNHEAGASQWYFLSDDWQEAIFTDINP
Ga0209526_105544542	3300028047	Forest Soil	MDYWRSSTIPYGSGGNNHEAGASDWYFSSLQWQEVSFTDIGGSQF
Ga0268266_120113082	3300028379	Switchgrass Rhizosphere	MDYWRSPTIAYGTGGNNREAGASNWYFPSPEWQDATFTDIGGPQ
Ga0310037_100124451	3300030494	Peatlands Soil	RTPTIAYGPGGNNHEAGASNWYFPSDQWQEATFTDIGGPQF
Ga0170820_111648962	3300031446	Forest Soil	KISPGALLQVGMDYWRNPTVGYGPGGNNHEAGASRWYFASDEWQTAEFTDIKP
Ga0307478_107159452	3300031823	Hardwood Forest Soil	TIPYGPGGNNHEAGASNWYFPSDQWQEAIFTDIGGPQF
Ga0308173_108043071	3300032074	Soil	QMGFDYWRSASEPYGRGGNNHEAGASDWFFSSDGWQEAIFSDIGGSRF
Ga0307472_1026731132	3300032205	Hardwood Forest Soil	TVAYSSGGNNHEAGASDWYFPAPEWQEATFSDIKFSDIKR
Ga0335078_108293233	3300032805	Soil	KVHLRISQGALVQIGMDYWKNPSVEYAPGNSHEAGASDWYFPFENWQEAVFTDIGGPQF
Ga0335076_110394262	3300032955	Soil	IGMDYWKNPIVDYAPGNSHEAGASNWYFPSKGWQEAVFTDIGRPQF
Ga0310811_106719912	3300033475	Soil	VMISPGALLQMGMDYWRSPTIPYGSGGNNHEAGASRWYFPSPQWQEVTFTDIGGSQF

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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