Metagenome Family F071624

Basic Information
Family ID	F071624
Family Type	Metagenome
Number of Sequences	122
Average Sequence Length	48 residues
Representative Sequence	MSPLDPLEILQVIGYSIGALLPLWMLFQLVTHRSKLTNIERLLALLALT
Number of Associated Samples	98
Number of Associated Scaffolds	122

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	31.15 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	92.62 %
Associated GOLD sequencing projects	86
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.58

Most Common Taxonomy
Group	Bacteria (69.672 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere (12.295 % of family members)
Environment Ontology (ENVO)	Unclassified (54.918 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (73.770 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 51.95% β-sheet: 0.00% Coil/Unstructured: 48.05%
Feature Viewer

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Pfam ID	Name	% Frequency in 122 Family Scaffolds
PF00691	OmpA	88.52
PF00486	Trans_reg_C	1.64
PF14464	Prok-JAB	0.82
PF13360	PQQ_2	0.82
PF13533	Biotin_lipoyl_2	0.82

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	69.67 %
Unclassified	root	N/A	30.33 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	69.67 %
Unclassified	root	N/A	30.33 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	69.67 %
Unclassified	root	N/A	30.33 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	69.67 %
Unclassified	root	N/A	30.33 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.33 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	25.41 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	4.10 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.33 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	25.41 %
Blastocatellales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales	4.10 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.33 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	25.41 %
Pyrinomonadaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae	4.10 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.33 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	25.41 %
Pyrinomonas	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas	2.46 %
unclassified Pyrinomonadaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae	1.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.33 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	25.41 %
Pyrinomonas methylaliphatogenes	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	2.46 %
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	1.64 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000787\|JGI11643J11755_11314631	All Organisms → cellular organisms → Bacteria → Acidobacteria	567	Open in IMG/M
3300000953\|JGI11615J12901_10228736	Not Available	549	Open in IMG/M
3300003319\|soilL2_10030933	All Organisms → cellular organisms → Bacteria → Acidobacteria	5960	Open in IMG/M
3300003321\|soilH1_10077770	All Organisms → cellular organisms → Bacteria → Acidobacteria	2000	Open in IMG/M
3300003322\|rootL2_10168308	All Organisms → cellular organisms → Bacteria → Acidobacteria	1428	Open in IMG/M
3300003324\|soilH2_10074444	Not Available	1099	Open in IMG/M
3300004052\|Ga0055490_10173391	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	643	Open in IMG/M
3300004479\|Ga0062595_102017027	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	558	Open in IMG/M
3300004480\|Ga0062592_102653408	All Organisms → cellular organisms → Bacteria → Acidobacteria	506	Open in IMG/M
3300004643\|Ga0062591_102942277	Not Available	505	Open in IMG/M
3300005294\|Ga0065705_10407481	All Organisms → cellular organisms → Bacteria → Acidobacteria	871	Open in IMG/M
3300005332\|Ga0066388_102589363	All Organisms → cellular organisms → Bacteria → Acidobacteria	924	Open in IMG/M
3300005335\|Ga0070666_11061896	All Organisms → cellular organisms → Bacteria → Acidobacteria	601	Open in IMG/M
3300005406\|Ga0070703_10354323	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	627	Open in IMG/M
3300005406\|Ga0070703_10553427	All Organisms → cellular organisms → Bacteria → Acidobacteria	525	Open in IMG/M
3300005441\|Ga0070700_100830350	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	747	Open in IMG/M
3300005441\|Ga0070700_101930076	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	511	Open in IMG/M
3300005457\|Ga0070662_101418222	All Organisms → cellular organisms → Bacteria → Acidobacteria	598	Open in IMG/M
3300005458\|Ga0070681_11721295	Not Available	553	Open in IMG/M
3300005467\|Ga0070706_101083156	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	738	Open in IMG/M
3300005518\|Ga0070699_100239552	All Organisms → cellular organisms → Bacteria → Acidobacteria	1619	Open in IMG/M
3300005518\|Ga0070699_100328470	All Organisms → cellular organisms → Bacteria → Acidobacteria	1375	Open in IMG/M
3300005546\|Ga0070696_100133008	All Organisms → cellular organisms → Bacteria → Acidobacteria	1812	Open in IMG/M
3300005546\|Ga0070696_101884752	Not Available	518	Open in IMG/M
3300005547\|Ga0070693_100323593	Not Available	1047	Open in IMG/M
3300005548\|Ga0070665_102493242	All Organisms → cellular organisms → Bacteria → Acidobacteria	519	Open in IMG/M
3300005577\|Ga0068857_102054098	Not Available	561	Open in IMG/M
3300005578\|Ga0068854_102080789	Not Available	524	Open in IMG/M
3300005615\|Ga0070702_100069533	All Organisms → cellular organisms → Bacteria → Acidobacteria	2075	Open in IMG/M
3300005615\|Ga0070702_100784852	All Organisms → cellular organisms → Bacteria → Acidobacteria	735	Open in IMG/M
3300005617\|Ga0068859_101120468	All Organisms → cellular organisms → Bacteria → Acidobacteria	866	Open in IMG/M
3300005617\|Ga0068859_101351540	Not Available	785	Open in IMG/M
3300005617\|Ga0068859_102111238	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	622	Open in IMG/M
3300005719\|Ga0068861_102160874	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	557	Open in IMG/M
3300005842\|Ga0068858_101075446	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	789	Open in IMG/M
3300005842\|Ga0068858_101109189	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	777	Open in IMG/M
3300006169\|Ga0082029_1137861	All Organisms → cellular organisms → Bacteria → Acidobacteria	1138	Open in IMG/M
3300006755\|Ga0079222_12471659	All Organisms → cellular organisms → Bacteria → Acidobacteria	521	Open in IMG/M
3300006852\|Ga0075433_11173937	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	667	Open in IMG/M
3300006854\|Ga0075425_103086356	All Organisms → cellular organisms → Bacteria → Acidobacteria	508	Open in IMG/M
3300006871\|Ga0075434_102475543	Not Available	520	Open in IMG/M
3300006880\|Ga0075429_100447470	Not Available	1132	Open in IMG/M
3300006894\|Ga0079215_11190333	Not Available	579	Open in IMG/M
3300009093\|Ga0105240_11837268	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	631	Open in IMG/M
3300009093\|Ga0105240_12040171	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	596	Open in IMG/M
3300009101\|Ga0105247_10162128	All Organisms → cellular organisms → Bacteria → Acidobacteria	1481	Open in IMG/M
3300009101\|Ga0105247_11493306	Not Available	551	Open in IMG/M
3300009148\|Ga0105243_10407131	All Organisms → cellular organisms → Bacteria → Acidobacteria	1265	Open in IMG/M
3300009148\|Ga0105243_12114291	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	599	Open in IMG/M
3300009177\|Ga0105248_13308255	Not Available	512	Open in IMG/M
3300009545\|Ga0105237_12027909	Not Available	584	Open in IMG/M
3300009553\|Ga0105249_12283350	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	614	Open in IMG/M
3300009553\|Ga0105249_12897069	All Organisms → cellular organisms → Bacteria → Acidobacteria	551	Open in IMG/M
3300010166\|Ga0126306_10655100	Not Available	840	Open in IMG/M
3300010166\|Ga0126306_10713137	Not Available	805	Open in IMG/M
3300010359\|Ga0126376_12189451	Not Available	598	Open in IMG/M
3300010397\|Ga0134124_10269488	All Organisms → cellular organisms → Bacteria → Acidobacteria	1574	Open in IMG/M
3300010397\|Ga0134124_12619953	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	547	Open in IMG/M
3300010400\|Ga0134122_12325390	Not Available	582	Open in IMG/M
3300010403\|Ga0134123_11357369	Not Available	749	Open in IMG/M
3300012212\|Ga0150985_120868994	All Organisms → cellular organisms → Bacteria → Acidobacteria	1000	Open in IMG/M
3300012960\|Ga0164301_10739914	Not Available	745	Open in IMG/M
3300013100\|Ga0157373_10693260	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	746	Open in IMG/M
3300013102\|Ga0157371_10198177	All Organisms → cellular organisms → Bacteria → Acidobacteria	1439	Open in IMG/M
3300013296\|Ga0157374_10233311	All Organisms → cellular organisms → Bacteria → Acidobacteria	1808	Open in IMG/M
3300013297\|Ga0157378_12452708	All Organisms → cellular organisms → Bacteria → Acidobacteria	573	Open in IMG/M
3300013306\|Ga0163162_10010186	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	9131	Open in IMG/M
3300013306\|Ga0163162_11701294	All Organisms → cellular organisms → Bacteria → Acidobacteria	720	Open in IMG/M
3300013308\|Ga0157375_13420597	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	528	Open in IMG/M
3300013308\|Ga0157375_13811489	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	500	Open in IMG/M
3300014268\|Ga0075309_1114076	All Organisms → cellular organisms → Bacteria → Acidobacteria	667	Open in IMG/M
3300015372\|Ga0132256_102067471	Not Available	675	Open in IMG/M
3300015374\|Ga0132255_105156917	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	553	Open in IMG/M
3300018429\|Ga0190272_11905647	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	625	Open in IMG/M
3300018429\|Ga0190272_13093312	Not Available	517	Open in IMG/M
3300018476\|Ga0190274_10592012	All Organisms → cellular organisms → Bacteria → Acidobacteria	1133	Open in IMG/M
3300021184\|Ga0196959_10044269	All Organisms → cellular organisms → Bacteria → Acidobacteria	907	Open in IMG/M
3300024251\|Ga0247679_1081327	All Organisms → cellular organisms → Bacteria → Acidobacteria	545	Open in IMG/M
3300024330\|Ga0137417_1495815	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	3420	Open in IMG/M
3300025885\|Ga0207653_10197589	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	757	Open in IMG/M
3300025900\|Ga0207710_10366089	Not Available	736	Open in IMG/M
3300025900\|Ga0207710_10678158	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	540	Open in IMG/M
3300025901\|Ga0207688_10392499	All Organisms → cellular organisms → Bacteria → Acidobacteria	860	Open in IMG/M
3300025907\|Ga0207645_10439105	Not Available	880	Open in IMG/M
3300025911\|Ga0207654_11391325	Not Available	512	Open in IMG/M
3300025914\|Ga0207671_10116401	All Organisms → cellular organisms → Bacteria → Acidobacteria	2039	Open in IMG/M
3300025920\|Ga0207649_11023603	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	650	Open in IMG/M
3300025920\|Ga0207649_11609058	Not Available	514	Open in IMG/M
3300025922\|Ga0207646_10885010	All Organisms → cellular organisms → Bacteria → Acidobacteria	793	Open in IMG/M
3300025924\|Ga0207694_11324293	Not Available	609	Open in IMG/M
3300025933\|Ga0207706_11129769	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	654	Open in IMG/M
3300025935\|Ga0207709_11079512	Not Available	659	Open in IMG/M
3300025940\|Ga0207691_10653252	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	888	Open in IMG/M
3300025941\|Ga0207711_12051735	All Organisms → cellular organisms → Bacteria → Acidobacteria	514	Open in IMG/M
3300025944\|Ga0207661_11658409	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	584	Open in IMG/M
3300025945\|Ga0207679_10660605	All Organisms → cellular organisms → Bacteria → Acidobacteria	946	Open in IMG/M
3300025949\|Ga0207667_11044217	All Organisms → cellular organisms → Bacteria → Acidobacteria	803	Open in IMG/M
3300025960\|Ga0207651_11201211	Not Available	681	Open in IMG/M
3300025961\|Ga0207712_10034115	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3446	Open in IMG/M
3300025961\|Ga0207712_11117618	All Organisms → cellular organisms → Bacteria → Acidobacteria	702	Open in IMG/M
3300025981\|Ga0207640_11457853	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	614	Open in IMG/M
3300026035\|Ga0207703_11057833	Not Available	779	Open in IMG/M
3300026035\|Ga0207703_11070361	Not Available	774	Open in IMG/M
3300026075\|Ga0207708_11870494	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	526	Open in IMG/M
3300026078\|Ga0207702_11647907	All Organisms → cellular organisms → Bacteria → Acidobacteria	634	Open in IMG/M
3300026088\|Ga0207641_10275705	All Organisms → cellular organisms → Bacteria → Acidobacteria	1580	Open in IMG/M
3300026089\|Ga0207648_10128729	All Organisms → cellular organisms → Bacteria → Acidobacteria	2228	Open in IMG/M
3300026089\|Ga0207648_11363703	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	666	Open in IMG/M
3300026089\|Ga0207648_12036603	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	535	Open in IMG/M
3300026095\|Ga0207676_10939853	All Organisms → cellular organisms → Bacteria → Acidobacteria	850	Open in IMG/M
3300026118\|Ga0207675_100891603	Not Available	905	Open in IMG/M
3300026142\|Ga0207698_11755621	Not Available	636	Open in IMG/M
3300026142\|Ga0207698_12208734	Not Available	563	Open in IMG/M
3300027266\|Ga0209215_1005737	All Organisms → cellular organisms → Bacteria → Acidobacteria	1437	Open in IMG/M
3300027886\|Ga0209486_10636196	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	681	Open in IMG/M
3300027909\|Ga0209382_10362067	All Organisms → cellular organisms → Bacteria → Acidobacteria	1622	Open in IMG/M
3300028379\|Ga0268266_10547304	All Organisms → cellular organisms → Bacteria → Acidobacteria	1109	Open in IMG/M
3300031226\|Ga0307497_10178476	All Organisms → cellular organisms → Bacteria → Acidobacteria	904	Open in IMG/M
3300031547\|Ga0310887_10466189	All Organisms → cellular organisms → Bacteria → Acidobacteria	755	Open in IMG/M
3300031824\|Ga0307413_10060025	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2339	Open in IMG/M
3300032012\|Ga0310902_11090207	Not Available	558	Open in IMG/M
3300033179\|Ga0307507_10556356	Not Available	603	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	58.20%
Environmental	Environmental	41.80%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	58.20%
Terrestrial	Environmental → Terrestrial	40.98%
Aquatic	Environmental → Aquatic	0.82%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	40.98%
Rhizosphere	Host-Associated → Plants → Rhizosphere	35.25%
Rhizoplane	Host-Associated → Plants → Rhizoplane	21.31%
Marine	Environmental → Aquatic → Marine	0.82%
Roots	Host-Associated → Plants → Roots	0.82%
Rhizome	Host-Associated → Plants → Rhizome	0.82%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	25.41%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	23.77%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	19.67%
Loam	Environmental → Terrestrial → Soil → Loam	15.57%
Soil	Host-Associated → Plants → Rhizosphere → Soil	9.84%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.64%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.82%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.82%
Sand	Environmental → Terrestrial → Soil → Sand	0.82%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.82%
Unclassified	Host-Associated → Plants → Rhizome → Unclassified	0.82%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	25.41%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	19.67%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	13.93%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	12.30%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	9.84%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	7.38%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.64%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.64%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.64%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.64%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.82%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.82%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.82%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	0.82%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.82%
Unclassified	Host-Associated → Plants → Rhizome → Unclassified → Unclassified	0.82%

Habitat	Taxonomy	Distribution
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	12.30%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	9.02%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	8.20%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	5.74%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	4.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.10%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.10%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	4.10%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.28%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.28%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.28%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.46%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.46%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	2.46%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.46%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.46%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	1.64%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.64%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.64%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.64%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.64%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.64%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.64%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.82%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.82%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.82%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.82%
Termite Nest	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest	0.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.82%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.82%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.82%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.82%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	0.82%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.82%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.82%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.82%
Ectomycorrhiza	Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza	0.82%
Sugarcane Root And Bulk Soil	Host-Associated → Plants → Rhizome → Unclassified → Unclassified → Sugarcane Root And Bulk Soil	0.82%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.82%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.82%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000787	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000953	Soil microbial communities from Great Prairies - Kansas Corn soil	Environmental	Open in IMG/M
3300003319	Sugarcane bulk soil Sample L2	Environmental	Open in IMG/M
3300003321	Sugarcane bulk soil Sample H1	Environmental	Open in IMG/M
3300003322	Sugarcane root Sample L2	Host-Associated	Open in IMG/M
3300003324	Sugarcane bulk soil Sample H2	Environmental	Open in IMG/M
3300004052	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqC_D2	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006169	Termite nest microbial communities from Madurai, India	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014268	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailA_D1	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300021184	Soil microbial communities from Anza Borrego desert, Southern California, United States - S1+v_20	Environmental	Open in IMG/M
3300024251	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK20	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027266	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM2H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027886	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300033179	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI11643J11755_113146311	3300000787	Soil	MFPLDPLEILQVVGYGVGALLPLWLAVQLVSHREKLSSLERLLALLAVTMGGWHT
JGI11615J12901_102287362	3300000953	Soil	MSPLDPLEILQVIGYSIGALLPLWMLFQLVTHRSKLTNI
soilL2_100309337	3300003319	Sugarcane Root And Bulk Soil	MSPLDPLEILQVIGYSIGALLPLWMLFQLITHRSKLTNIERLLAL
soilH1_100777701	3300003321	Sugarcane Root And Bulk Soil	MSPLDPLEILQVIGYSIGALLPLWMLFQLITHRSKLTNIERLLALL
rootL2_101683082	3300003322	Sugarcane Root And Bulk Soil	LIAMSPLDPLEILQVIGYSIGAMLPLWMLFQLVTHRSKLTNIE
soilH2_100744441	3300003324	Sugarcane Root And Bulk Soil	MSPLDPLEILQVIGYSIGAMLPLWMLFQLVTHRSKLTNIERLLALLALT
Ga0055490_101733911	3300004052	Natural And Restored Wetlands	MSPLDPLQILQLVGYSIGALLPLWMAVQLVRNRSHLAPHERMLA
Ga0062595_1020170272	3300004479	Soil	MSPLDPLQILQIVGYSIGALLPTWMAIQLVSHRAKLTSLERMLALLALTMAGWHTSN
Ga0062592_1026534081	3300004480	Soil	MFPLDPLEILQVIGYSVGALLPLWMAVQLVLHRSKLSSLERLLAALALTMGGWHTS
Ga0062591_1029422771	3300004643	Soil	MSPLDPLEILQVIGYSIGALLPLWMLFQLVTHRSNLSNIERILALLALT
Ga0065705_104074811	3300005294	Switchgrass Rhizosphere	MSPLDPLQILQLVGYSVGALLPLWMAIQLVSHRNRLTSLERMLALLALTMGG
Ga0066388_1025893631	3300005332	Tropical Forest Soil	MFPLDPLEILQVIGYSIGALLPLWMAVQLVRRRTKLTSLERLLAALAL
Ga0070666_110618961	3300005335	Switchgrass Rhizosphere	MSPLDPLEILQVIGYSIGALLPLWMLFQLVTHRSKLTNIERLLALLALTMGGWHT
Ga0070703_103543231	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	MSPLDPLEILQVIGYSIGALLPLWMLFQLVTHRDKLTSIERILAALALTMGGWHT
Ga0070703_105534272	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	MSPLDPLEILQVIGYSIGALLPLWLLFQLVTHRNKLTNIERILAALALTMGGWHTSNL
Ga0070700_1008303501	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MSPLEPLEILQVIGYSIGALLPLWMLFQLVTHRSKLSNIER
Ga0070700_1019300762	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MSPLDPLEILQVIGYSIGALLPLWLLFQLVTHRNKLTNIERILAALAL
Ga0070662_1014182221	3300005457	Corn Rhizosphere	MSPLEILQLVGYSVGALLPMWMAYQLVSNRNRLTSLERMLFALALTMGG
Ga0070681_117212952	3300005458	Corn Rhizosphere	LFPLDPLEILQVIGYSVGALLPLWMAVQLVLTRRKLSSLERLLAALALTMGGWH
Ga0070706_1010831562	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MSPLDPLQILQLVGYSVGALLPLWMAVQLVTHRNRLTSLERMLA
Ga0070699_1002395522	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MSPLDPLQILQLVGYSIGALLPLWMAVQLVSHRSKLTSLERMLALLALTMGG
Ga0070699_1003284702	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MSPLDPLEILQVIGYSIGALLPLWMLFQLITHRSKLSNIERLLALLALTMGGWHT
Ga0070696_1001330081	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MSPLDPLQILQIVGYSIGALLPTWMAIQLVSHRAKLTSLERMLALLAITMGG
Ga0070696_1018847521	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MSPLDPLQILQIVGYSIGALLPTWMAIQLVSNRAKLTSLERMLALLALTMGGWHTSNLV
Ga0070693_1003235931	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MFPLDPLEILQVIGYSVGALLPLWMAVQLVLTKRKLSSLERLLAALALTMGGWHTSNL
Ga0070665_1024932421	3300005548	Switchgrass Rhizosphere	MFPLDPLEILQVVGYGVGALLPLWLAVQLVSHREKLSSLERL
Ga0068857_1020540982	3300005577	Corn Rhizosphere	MSPLDPLEILQVIGYSIGALLPLWMLFQLVTHRSSLTNIERLLALLALTMGGWHTSNLV
Ga0068854_1020807892	3300005578	Corn Rhizosphere	MSPLDPLQILQIIGYSIGALLPTWMAIQLVSHRAKLTSLERMLALLALTMGGWHT
Ga0070702_1000695333	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MSPLDPLEILQVIGYSIGALLPLWLLFQLVTHRNKLTNIERIL
Ga0070702_1007848521	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MSPLDPLEILQVIGYSVGALLPLWMAVQLVLTRRKLTTLERLLAALALTM
Ga0068859_1011204681	3300005617	Switchgrass Rhizosphere	MSPLDPLEILQVIGYSVGALLPLWMAVQLVLHRSKLSPLERLLAALALTMGGWH
Ga0068859_1013515402	3300005617	Switchgrass Rhizosphere	MSPLDPLEILQVIGYSIGALLPLWMLFQLITHRSKLSNIERLL
Ga0068859_1021112381	3300005617	Switchgrass Rhizosphere	MSPLDPLEILQVIGYGIGASLPLWMLFQLITHRSKLTNIERIL
Ga0068861_1021608742	3300005719	Switchgrass Rhizosphere	MSPLEPLEILQVIGYSIGALLPLWMLFQLVTHRSKL
Ga0068858_1010754461	3300005842	Switchgrass Rhizosphere	MSPLDPLEILQLVGYSVGALLPVWMAIQLVAHRSKLTSLERMLALLALTMG
Ga0068858_1011091891	3300005842	Switchgrass Rhizosphere	MSPLEPLEILQVIGYSIGALLPLWMLFQLVTHRSKLSNIERLLALL
Ga0082029_11378612	3300006169	Termite Nest	MSPLHLLEILHVFGYSIGALLPLWMLFQLVTHRSKLSDIERLLALLAATMGGWH
Ga0079222_124716592	3300006755	Agricultural Soil	MSPLDPLEILQVIGYSIGALLPLWMLFQLVTHRSKLSSIER
Ga0075433_111739372	3300006852	Populus Rhizosphere	MSPLDPLQILQIVGYSIGALLPTWMAIQLVSHRAKLTSLERMLA
Ga0075425_1030863561	3300006854	Populus Rhizosphere	MSPLDPLEILQVIGYSIGALLPLWMLFQLISHRSRLSNIERLLAAL
Ga0075434_1024755432	3300006871	Populus Rhizosphere	MSPLDPLQILQIVGYSIGALLPTWMAIQLVSHRAKLTSLERMLALLAITMGGWHTSNLII
Ga0075429_1004474701	3300006880	Populus Rhizosphere	MSPLEPLEILQVIGYSIGALLPLWMLFQLVTHRSK
Ga0079215_111903332	3300006894	Agricultural Soil	MSPLDPHEILQVIGYSIGALLPLWMLFQLVTHRSKLTSI
Ga0105240_118372681	3300009093	Corn Rhizosphere	MSPLDPLEILQVIGYSIGALLPLWMLFQLITHRSKLSDIERLLALLALTMGGWHTSNL
Ga0105240_120401711	3300009093	Corn Rhizosphere	MSPLEPLEILQVIGYSIGALLPLWMLSQLVTHRSKLSNIERLLALLA
Ga0105247_101621282	3300009101	Switchgrass Rhizosphere	MSPLDPLQILQIVGYSIGALLPTWMAIQLVSHRAKLTSLERMLALLA
Ga0105247_114933061	3300009101	Switchgrass Rhizosphere	MSPLDPLEILQVIGYSIGALLPLWMLFQLVTHRSKLTNIERLLALLALTMG
Ga0105243_104071311	3300009148	Miscanthus Rhizosphere	MSPLDPLQILQLVGYSVGALLPLWMAVQLVTHRNRLTSLERMLALLAL
Ga0105243_121142912	3300009148	Miscanthus Rhizosphere	MSPLDPLQILQIVGYSIGALLPTWMAIQLVTHRAKLT
Ga0105248_133082552	3300009177	Switchgrass Rhizosphere	MSPLDPLEILQVIGYSIGALLPLWMLFQLVTHRSKLTNIERLLALLALTMGGWHTSNLV
Ga0105237_120279092	3300009545	Corn Rhizosphere	MSPLDPLEILQVIGYSIGALLPLWMLFQLVTHRSKLTNIE
Ga0105249_122833502	3300009553	Switchgrass Rhizosphere	MSPLDPLQILQLVGYSVGALLPLWMAIQLVKHRAKLTSLERMLALLALTMGGWHT
Ga0105249_128970692	3300009553	Switchgrass Rhizosphere	MFPLDPLEILQVVGYSVGALLPLWLAVQLVSHRKTLSSLERLLALLAVTMGGWHTSN
Ga0126306_106551002	3300010166	Serpentine Soil	MSPLDPLEILQVIGYSIGALLPLWMVFQLVSHRSKLTSIERLLAALALTMGGWHTSNLA
Ga0126306_107131372	3300010166	Serpentine Soil	MSPLDPHEILQVIGYSIGALLPLWMLLQLVTHRNNLTSIERILALLALTMGGWH
Ga0126376_121894512	3300010359	Tropical Forest Soil	MSPLDPLEILQVIGYSIGALLPLWMLFQLVTHRSKLS
Ga0134124_102694882	3300010397	Terrestrial Soil	MFPLDPLEILQVVGYGVGALLPLWLAVQLVSHREKLSSLERLLALLAVTMGGW
Ga0134124_126199532	3300010397	Terrestrial Soil	MSPLDPLQILQIVGYSIGALLPTWMAIQLVSHRARLTSLERMLALL
Ga0134122_123253901	3300010400	Terrestrial Soil	MSPLEPLEILQVIGYSIGAMLPLWMLFQLVTHRSKLTDIERLLALL
Ga0134123_113573691	3300010403	Terrestrial Soil	MSPLEILQLVGYSVGALLPLWMAFQLVSHRTTLTPTERLLACLALTMG
Ga0150985_1208689941	3300012212	Avena Fatua Rhizosphere	MSPLDPLQILQLVGYSVGALLPLWMAIQLVNHRSKLPPLE
Ga0164301_107399141	3300012960	Soil	MSPLDPLQILQIIGYSIGALLPTWMAIQLVRHRTNLTSLERMLALLALT
Ga0157373_106932602	3300013100	Corn Rhizosphere	LFPLDPLEILQVIGYSVGALLPLWMAVQLVLTRRKLSSLERLLAALALTMGGWHTSNLVI
Ga0157371_101981771	3300013102	Corn Rhizosphere	MFPLDPLEILQVVGYSVGALLPLWLAVQLVSHRKTLSSLERLLALLAVTMGGWHTSNL
Ga0157374_102333112	3300013296	Miscanthus Rhizosphere	MSPLDPLEILQLVGYSVGALLPLWMAIQLVSHRSKLTSLERMLALLAL
Ga0157378_124527081	3300013297	Miscanthus Rhizosphere	MFPLDPLEILQVVGYSVGALLPLWLAVQLVSHRKT
Ga0163162_1001018610	3300013306	Switchgrass Rhizosphere	MFLASMSPLDPLQILQLVGYSVGAILPIFMAVQLVRNR
Ga0163162_117012941	3300013306	Switchgrass Rhizosphere	MSPLDPLEILQVIGYSIGALLPLWMLFQLVRHRSKLTSIEQLLA
Ga0157375_134205971	3300013308	Miscanthus Rhizosphere	MSPLDPLEILQVIGYSIGALLPLWMLFQLVTHRSKLTNIERLLALLALT
Ga0157375_138114891	3300013308	Miscanthus Rhizosphere	MSPLDPLEILQVIGYSIGALLPLWMAVQLVRHRDKLTNVERILAALALT
Ga0075309_11140761	3300014268	Natural And Restored Wetlands	MSPLDPLEILQVIGYSIGALLPLWMLVQLVTHRSKLTNIE
Ga0132256_1020674711	3300015372	Arabidopsis Rhizosphere	MSALEILQLVGYSVGALLPLWMAFQLVSHRTTLTPTERLLACLALTM
Ga0132255_1051569172	3300015374	Arabidopsis Rhizosphere	MSPLEILQLVGYSVGALLPLWMAFQLVSHRTTLTPTERLLACLALTMGGWHM
Ga0190272_119056471	3300018429	Soil	MSPLDPLEILQVIGYSVGALLPLWMAVQLVLHRSKLTTLERLLAALALTMAGWHTSNLA
Ga0190272_130933121	3300018429	Soil	MSPLDPLEILQVIGYSIGAVLPLWMVVQLVTHRRKLTIIER
Ga0190274_105920122	3300018476	Soil	MSPLDPLEILQVIGYSIGALLPLWMLFQLVTHRSKLTDIERLLALLA
Ga0196959_100442692	3300021184	Soil	MSPLDPLEILQVIGYSIGALLPLWMLFQLVTHRSKLTSIERILAALALTMGGWHTSNL
Ga0247679_10813271	3300024251	Soil	MFPLEPLEILQVIGYSIGALLPLWLAVQLVLHRSRLSNLERLLAALALTMGGW
Ga0137417_14958151	3300024330	Vadose Zone Soil	MSPLDILQLVGYSIAALLPLWMAVQLVSHRARLTSLERMLFALALTM
Ga0207653_101975891	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	MSPLDPLEILQVIGYSIGALLPLWMLFQLVTHRDKLTSIERILAALALTMG
Ga0207710_103660892	3300025900	Switchgrass Rhizosphere	MSPLEPLEILQVIGYSIGALLPLWMLFQLVTHRSKLTNI
Ga0207710_106781582	3300025900	Switchgrass Rhizosphere	MSPLDPLQILQIVGYSIGALLPTWMAIQLVSHRAKLTSLERMLAL
Ga0207688_103924991	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MSPLDPLEILQVIGYTIGALLPLWMAVQLVRRRTKLTNIERMLAAL
Ga0207645_104391051	3300025907	Miscanthus Rhizosphere	MSPLDPLEILQVIGYSIGAVLPLWMLFQLVTHRSKLTNIERLLALLALT
Ga0207654_113913252	3300025911	Corn Rhizosphere	MSPLDPLEILQVIGYSIGALLPLWMLFQLITHRSKLSNIERL
Ga0207671_101164013	3300025914	Corn Rhizosphere	MSPLEPLEILQVIGYSIGALLPLWMLYQLVTHRSKL
Ga0207649_110236032	3300025920	Corn Rhizosphere	MSPLDPLQILQLVGYSVGALLPLWMAVQLVTHRNRLTSLERMLALLALT
Ga0207649_116090581	3300025920	Corn Rhizosphere	MSPLDPLEILQVIGYSIGALLPLWMLFQLVTHRSKLTNIERLLALLAL
Ga0207646_108850102	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MFPLDPLEILQVIGYSVGALLPLWMAVQLVLHRSKLSRLETLLAALALTMG
Ga0207694_113242932	3300025924	Corn Rhizosphere	MSPLDPLEILQVIGYSIGALLPLWMLFQLITHRSKLSNIERLLALLALTMGGW
Ga0207706_111297691	3300025933	Corn Rhizosphere	MSPLDPLEILQVIGYSIGATLPLWMLFQLITHRSKLTDIERLLALLALTMGGWHTS
Ga0207709_110795121	3300025935	Miscanthus Rhizosphere	MSALEILQLVGYSVGALLPLWMAFQLVSHRTTLSSTERLLACLA
Ga0207691_106532522	3300025940	Miscanthus Rhizosphere	MFLASMSPLDPLQILQLVGYSVGAILPIFMAVQLVRNRGRLTSLERMLALLAL
Ga0207711_120517352	3300025941	Switchgrass Rhizosphere	MSPLDPLEILQVIGYSIGALLPLWMLFQLVRHRSKLSNIERLLAL
Ga0207661_116584091	3300025944	Corn Rhizosphere	MSPLDPLEILQLVGYSVGALLPLWMAIQLVSHRSKLTA
Ga0207679_106606052	3300025945	Corn Rhizosphere	MSPLDPLEILQVIGYSIGALLPLWMAVQLVRHRAKLTSVERLLAALA
Ga0207667_110442172	3300025949	Corn Rhizosphere	MSPLDPLQILQIVGYSIGALLPTWMAIQLVSHRAKLTSLERMLALLALTMAG
Ga0207651_112012112	3300025960	Switchgrass Rhizosphere	MSPLDPLEILQVIGYSIGALLPLWMLFQLVTHRSKLTNIERLLALLALTMGGW
Ga0207712_100341151	3300025961	Switchgrass Rhizosphere	MSPLDPLQILQLVGYSVGALLPLWMAVQLVTHRNRLTSLERMLALLALTMGG
Ga0207712_111176182	3300025961	Switchgrass Rhizosphere	MSPLDPLEILQVIGYTIGALLPLWMAVQLVRRRTKLTNIERMLAALALTMGGWHTSN
Ga0207640_114578532	3300025981	Corn Rhizosphere	MSPLDPLEILQVIGYTIGALLPLWMLFQLVTHRSKLTSMERILALLALTMGGWHTSN
Ga0207703_110578331	3300026035	Switchgrass Rhizosphere	MSALEILQLVGYSVGALLPLWMAFQLVSHRTTLSSTERLLACLALTMGGW
Ga0207703_110703612	3300026035	Switchgrass Rhizosphere	MSPLDPLEILQVIGYSIGALLPLWMFFQLVTHRTKLTSIER
Ga0207708_118704942	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MSPLEPLEILQVIGYSIGALLPLWMLFQLVTHRDKLSNMERLLALLALTMGG
Ga0207702_116479071	3300026078	Corn Rhizosphere	MSPLDPLEILQVIGYSIGAVLPLWMLFQLVTHRSKLTNIERLLALLALTMGGWHTS
Ga0207641_102757052	3300026088	Switchgrass Rhizosphere	MSPLDPLEILQLVGYSVGALLPLWMAIQLVSHRSKLTALERMLALL
Ga0207648_101287293	3300026089	Miscanthus Rhizosphere	MSPLDPLEILQVIGYSIGAMLPLWMLFQLVTHRSKLTDIERLLALLALTMGG
Ga0207648_113637031	3300026089	Miscanthus Rhizosphere	MSPLDPLEILQLVGYSVGALLPLWMAIQLVSHRSKLTALERMLALLA
Ga0207648_120366032	3300026089	Miscanthus Rhizosphere	MSPLDPLEILQLVGYSVGALLPVWMAIQLVAHRSKLTSLERMLALLA
Ga0207676_109398532	3300026095	Switchgrass Rhizosphere	MSPLDPHEILQVIGYSIGALLPLWMLFQLVTHRSKLTNIERLLALLALTMGGWH
Ga0207675_1008916033	3300026118	Switchgrass Rhizosphere	MSALEILQLVGYSVGALLPLWMAFQLVSHRTTLSSTERLLACLALTMG
Ga0207698_117556211	3300026142	Corn Rhizosphere	MSPLDPLEILQVIGYTIGALLPLWMAVQLVRRRTKLTNIERMLAALALTMG
Ga0207698_122087341	3300026142	Corn Rhizosphere	LFISMSPLDPLEILQVIGYSIGALLPLWMLFQLITHRSKLSNIERLLALLALTMG
Ga0209215_10057371	3300027266	Forest Soil	MPMFPLNPLEILQVIGYSVGALLPLWMAVQLVLHRSKLSSLERLLAALALTMGGWH
Ga0209486_106361962	3300027886	Agricultural Soil	MSPLDPHEILQVIGYSIGALLPLWMAVQLVRHRKKL
Ga0209382_103620671	3300027909	Populus Rhizosphere	MSPLEPLEILQVIGYSIGALLPLWMLFQLVTHRSKLTSI
Ga0268266_105473041	3300028379	Switchgrass Rhizosphere	MFPLDPLEILQVVGYGVGALLPLWLAVQLVSHREKLSSLERVLALLAVTMGGWHTSNLLI
Ga0307497_101784761	3300031226	Soil	MSPLDPLQILQLVGYSVGALIPLWMAVQLVTHRNRL
Ga0310887_104661892	3300031547	Soil	VSPLEILQVVGYSIGAVLPLWMAFQLVTHRTKLTAHERLLAALALTMGG
Ga0307413_100600251	3300031824	Rhizosphere	MSPLEPLEILQVIGYSIGALLPLWMLFQLITHRSKLSNIER
Ga0310902_110902071	3300032012	Soil	MSPLDPLEILQVIGYSIGALLPLWMLFQLITHRSKLSNIERLLALLALTMGGWHTS
Ga0307507_105563562	3300033179	Ectomycorrhiza	MSPLEPLEILQVIGYGIGALLPLWMLFQLVTHRSKLSNIERLLALLA

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.58
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.58
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F071624

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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