Metagenome Family F071617

Basic Information
Family ID	F071617
Family Type	Metagenome
Number of Sequences	122
Average Sequence Length	80 residues
Representative Sequence	KSATLLEGEKLRGLEYVFDENGMWVRYHPSQYQESSSNKLKEYKVENGIVRGFDDNKGDLSDGKYARSVKFVAAIAK
Number of Associated Samples	98
Number of Associated Scaffolds	122

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	21.31 %
% of genes from short scaffolds (< 2000 bps)	22.13 %
Associated GOLD sequencing projects	85
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.47

Most Common Taxonomy
Group	Unclassified (86.885 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere (12.295 % of family members)
Environment Ontology (ENVO)	Unclassified (57.377 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (73.770 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 39.05% Coil/Unstructured: 60.95%
Feature Viewer

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Pfam ID	Name	% Frequency in 122 Family Scaffolds
PF05195	AMP_N	2.46
PF12867	DinB_2	2.46
PF13407	Peripla_BP_4	2.46
PF07099	DUF1361	1.64
PF03160	Calx-beta	1.64
PF03588	Leu_Phe_trans	1.64
PF13191	AAA_16	0.82
PF06296	RelE	0.82
PF00557	Peptidase_M24	0.82
PF13279	4HBT_2	0.82
PF04972	BON	0.82
PF14559	TPR_19	0.82
PF11453	DUF2950	0.82
PF07995	GSDH	0.82
PF01594	AI-2E_transport	0.82
PF01381	HTH_3	0.82
PF14413	Thg1C	0.82
PF02617	ClpS	0.82
PF05960	DUF885	0.82
PF12281	NTP_transf_8	0.82

COG ID	Name	Functional Category	% Frequency in 122 Family Scaffolds
COG0006	Xaa-Pro aminopeptidase	Amino acid transport and metabolism [E]	2.46
COG2360	Leu/Phe-tRNA-protein transferase	Posttranslational modification, protein turnover, chaperones [O]	1.64
COG4330	Uncharacterized membrane protein, DUF1361 domain	Function unknown [S]	1.64
COG0628	Predicted PurR-regulated permease PerM	General function prediction only [R]	0.82
COG2127	ATP-dependent Clp protease adapter protein ClpS	Posttranslational modification, protein turnover, chaperones [O]	0.82
COG2133	Glucose/arabinose dehydrogenase, beta-propeller fold	Carbohydrate transport and metabolism [G]	0.82
COG4737	Uncharacterized conserved protein	Function unknown [S]	0.82
COG4805	Uncharacterized conserved protein, DUF885 family	Function unknown [S]	0.82

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.89 %
All Organisms	root	All Organisms	13.11 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.89 %
cellular organisms	root	All Organisms → cellular organisms	13.11 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.89 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	13.11 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.89 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	7.38 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.82 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.89 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	4.10 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	2.46 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.82 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.89 %
Blastocatellales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales	2.46 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.46 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.82 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.89 %
Pyrinomonadaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae	2.46 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.46 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.82 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.89 %
unclassified Pyrinomonadaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae	2.46 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.46 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.82 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.89 %
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	2.46 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.46 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.82 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.82 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004081\|Ga0063454_100911543	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	695	Open in IMG/M
3300004480\|Ga0062592_102261006	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300005289\|Ga0065704_10312945	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	865	Open in IMG/M
3300005289\|Ga0065704_10833706	Not Available	514	Open in IMG/M
3300005330\|Ga0070690_101504958	Not Available	544	Open in IMG/M
3300005344\|Ga0070661_100947761	All Organisms → cellular organisms → Bacteria	712	Open in IMG/M
3300005364\|Ga0070673_100663552	Not Available	955	Open in IMG/M
3300005844\|Ga0068862_100535496	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	1116	Open in IMG/M
3300009094\|Ga0111539_12181591	All Organisms → cellular organisms → Bacteria	643	Open in IMG/M
3300009162\|Ga0075423_11372769	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	756	Open in IMG/M
3300009177\|Ga0105248_10348902	All Organisms → cellular organisms → Bacteria → Acidobacteria	1666	Open in IMG/M
3300011003\|Ga0138514_100041033	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	910	Open in IMG/M
3300011119\|Ga0105246_12263022	Not Available	530	Open in IMG/M
3300011993\|Ga0120182_1009278	Not Available	708	Open in IMG/M
3300012482\|Ga0157318_1006372	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	777	Open in IMG/M
3300012912\|Ga0157306_10114848	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	802	Open in IMG/M
3300012957\|Ga0164303_10485545	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	787	Open in IMG/M
3300013296\|Ga0157374_12904052	Not Available	506	Open in IMG/M
3300013307\|Ga0157372_11883531	Not Available	687	Open in IMG/M
3300015372\|Ga0132256_100217085	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1967	Open in IMG/M
3300025904\|Ga0207647_10745863	Not Available	530	Open in IMG/M
3300025917\|Ga0207660_11707435	Not Available	506	Open in IMG/M
3300025933\|Ga0207706_11607653	Not Available	526	Open in IMG/M
3300025960\|Ga0207651_10578781	Not Available	979	Open in IMG/M
3300026116\|Ga0207674_10837244	All Organisms → cellular organisms → Bacteria	887	Open in IMG/M
3300026121\|Ga0207683_10822556	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	862	Open in IMG/M
3300031716\|Ga0310813_10435911	All Organisms → cellular organisms → Bacteria	1134	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	61.48%
Environmental	Environmental	38.52%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	61.48%
Terrestrial	Environmental → Terrestrial	36.89%
Aquatic	Environmental → Aquatic	1.64%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	36.07%
Rhizoplane	Host-Associated → Plants → Rhizoplane	30.33%
Rhizosphere	Host-Associated → Plants → Rhizosphere	30.33%
Marine	Environmental → Aquatic → Marine	1.64%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.82%
Roots	Host-Associated → Plants → Roots	0.82%

Habitat	Taxonomy	Distribution
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	25.41%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	22.95%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	18.03%
Loam	Environmental → Terrestrial → Soil → Loam	13.11%
Soil	Host-Associated → Plants → Rhizosphere → Soil	12.30%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	4.10%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.64%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.82%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.82%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.82%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	25.41%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	18.03%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	13.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	12.30%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.02%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.10%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	4.10%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.28%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.46%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.64%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.64%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.82%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.82%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.82%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.82%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.82%

Habitat	Taxonomy	Distribution
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	12.30%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	7.38%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	6.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.92%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	4.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	4.10%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.28%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.28%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.28%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.28%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	3.28%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.28%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	3.28%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.46%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.46%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.46%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.46%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.46%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.64%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.64%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.64%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	1.64%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.64%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.64%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.64%
Terrestrial	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial	0.82%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	0.82%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.82%
Termite Nest	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest	0.82%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.82%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.82%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.82%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.82%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.82%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.82%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.82%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.82%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.82%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000596	Amended soil microbial communities from Kansas Great Prairies, USA - Total DNA no BrdU F1.4TC	Environmental	Open in IMG/M
3300000787	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004019	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleB_D2	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004268	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006169	Termite nest microbial communities from Madurai, India	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300011003	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t9i015	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011993	Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - C1.rep1	Environmental	Open in IMG/M
3300012482	Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.2.old.130510	Host-Associated	Open in IMG/M
3300012517	Unplanted soil (control) microbial communities from North Carolina - M.Soil.6.yng.070610	Environmental	Open in IMG/M
3300012912	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025796	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D2 (SPAdes)	Environmental	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027654	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio (SPAdes)	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F14TC_1029659511	3300000559	Soil	EEIKSTPMLEGEKLRGLEYVIDENSMWVRFHPGQYQESTSNKLKDYKIENDVVRGIDENDGSLTDGKYSRSVKFVAAISK*
KanNP_Total_noBrdU_T14TCDRAFT_10229961	3300000596	Soil	PLLEGDKIRGLEYVIDENGMWVRYHPSQYQESGSMKIKDYKVENDIVRGTDENDGSLSDGKYARSVKFVASIVK*
JGI11643J11755_106187482	3300000787	Soil	PADQLAEEIKLATLLEGNKLRGLEYVIDDNGMWVRFHPSQYQESSSNKLKTYRVEGDIVRGEDDGSGLSDNYSRSVKFVAAIVK*
JGI10214J12806_116409402	3300000891	Soil	ATLLEGEKLRGLEYVIDDNGMWVRFHPSQYQESSSNKIKNYSVAGDIVRGEDEGSGLSDKYSRSVKFVAAIIK*
JGI10216J12902_1111680292	3300000956	Soil	KPIPPEAVAEEIKSTPLLEGNKIRGLEYAIDENSMWVRYHPSQYQESSSNKLKEYKVENDIVHGVDENEGNLSGGKYDRKVKFVAAIIK*
JGI10216J12902_1220058051	3300000956	Soil	LKDATMLVNEKVRGLEYVIDENSMWVRYHPGQYQESSSNKLKEYKVENGIVRGVDDNAGDLSDGRYARSVKFVAAIAK*
Ga0055439_101876501	3300004019	Natural And Restored Wetlands	VAEEIKSQTLLLGEKIRGLEYVIDKEGMWIRYHPGQYQESSGRNLKEYIVEGDVVRGTDEDDGHLSDGRYARSVKFVAAVAK*
Ga0063454_1009115431	3300004081	Soil	YVLDEKSMWVRFHPGQYQESTSNKLKDYKTENGIVKGTDENDGSLTDGKYSRSVKFVAAIK*
Ga0066398_102303971	3300004268	Tropical Forest Soil	EEIKSTPLLEGEKIRGLEYSIEENNLWVRYHPSQYQESGTNNLKEYKVENNIVRGVDENSGSLSNGKYSRSVKFVATIMK*
Ga0062595_1017439761	3300004479	Soil	EKLRGLEYVIDENSMWVRFHPSQYQESSSNKLKEYKVENGIVRGVDENTGDLNDGKYARSVKFVAAIAK*
Ga0062592_1022610062	3300004480	Soil	YVIDENSMWVRYHPSQYQESSSNKLKEYKVENGIVRGIDDNEGDLSNGKYARKVKFVATISK*
Ga0062591_1015325542	3300004643	Soil	LEGEKIRGLEYVIDENSMWVRYHPSQYQESSSNKLKDYKVENGVVRAVDDNEGDLSNGKYARSVKFVATIVK*
Ga0062594_1017398512	3300005093	Soil	ETIRGLEYAIDENGMWVRYHPGQYQESTSKNLKEYSVNGDVVRGVDENDGSLSDGKYARSVKFVAAVVK*
Ga0065704_103129452	3300005289	Switchgrass Rhizosphere	EYVIDKDGMWVRFHPSQYQESTSNKLKDYSVDGNVVRGTDDGGGNLSDGKYGRTVKFVAAFVN*
Ga0065704_108337062	3300005289	Switchgrass Rhizosphere	ILVTEKPIPAEAVAEEIKSTPLLEGEKIRGLEYVIDENSMWVRYHPSQYQESSSNKLKDYKVENGVVRAVDDNEGDLSNGKYARSVKFVATIVK*
Ga0065715_100249843	3300005293	Miscanthus Rhizosphere	SQTLLQSEQLRGLEYVIDKDGMWVRFHPSQYQESTSNKLKDYSVEGNIVRGTDDGGGNLSDGKYGRTVKFVAAFVN*
Ga0065705_101293411	3300005294	Switchgrass Rhizosphere	SEEIKSQTLLQSEQLRGLEYVIDKDGMWVRFHPSQYQESTSNKLKDYSVDGNVVRGTDDGGGNLSDGKYGRTVKFVAAFVN*
Ga0070690_1003874211	3300005330	Switchgrass Rhizosphere	KHVFKSATLLEGEKLRGLEYVFDENGMWVRYHPSQYQESSSNKLKEYKVENGIVRGFDDNKGDLSDGKYARSVKFVAAIAK*
Ga0070690_1015049582	3300005330	Switchgrass Rhizosphere	EYVFDDNGMWVRYHPSQYQESSSNKLKEYKVENGIVRGIDDNAGNLSDGKYARSVKFVATIAK*
Ga0070670_1014978692	3300005331	Switchgrass Rhizosphere	VAEELKSQTLFQSEQIKGLEYVIDKDGMWVRFHPSQYQESSRNQLKDYSVEGDVVRGIDDGSAQLDAEHSRSVKFVAAIVK*
Ga0070670_1016782371	3300005331	Switchgrass Rhizosphere	IPPEALAEEIKSATLLEAEKIRGLEYVIDENSMWVRYHPSQYQESSSNKLKDYKVENGIVRGVDDNEGDLSNGKYARKVKFVATILK*
Ga0068869_1003249751	3300005334	Miscanthus Rhizosphere	GERFSEESIIILVTDKPIPSEALTEEIKDQTLLLGEKIKGLEYVISENGMWVRFHPGQYQESTSNKLKDYSVEGDIVRGTDEGSDLSDGKYNRNVKFVAAIVK*
Ga0068869_1011391081	3300005334	Miscanthus Rhizosphere	DQPIPPEALAEEIKSATLLEGEKLRGLEYVVDENSMWVRFHPGQYQESSSNKLKEYKVENGIVRGVDENTGDLNDGKYARSVKFVATIAKATDEADFNSPV
Ga0070680_1006504181	3300005336	Corn Rhizosphere	KSQTLLQSEQLRGLEYVIDKDGMWVRFHPSQYQESSSNKLKDYSVDGNIVRGTDDGGGNLSDGKYGRTVKFVAAFVN*
Ga0070680_1006971283	3300005336	Corn Rhizosphere	RGLEYVIDENSMWVRFHPGQYQESTSNKLKDYKVESDVVRGFDDNDGSLTDGKYSRSVKFVATIGK*
Ga0070691_108448681	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	DKPIPPEALAEEIKSATLLEGEKIRGLEYVFDDNGMWVRYHPSQYQESSSNKLKEYKVENGIVRGIDDNAGNLSDGKYARSVKFVATIAK*
Ga0070687_1015184701	3300005343	Switchgrass Rhizosphere	TLLEGEKLRGLEYVFDENGMWVRYHPSQYQESSSNKLKEYKVENGIVRGFDDNKGDLSDGKYARSVKFVAAIAK*
Ga0070661_1009477612	3300005344	Corn Rhizosphere	EYVLDENSMWVRYHPSQYQESSSNKLKEYKVENGIVRGLDDNSGDLSEGKYARNVKFVAAIAK*
Ga0070692_109849942	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	EIKSTPLLEGEKIRGLEYVMMDENSMWVRFHPSQYQESSSNKLKDYKVENDIVRGTDTDESNLSSGKYARSVKFVAAIAK*
Ga0070669_1007744732	3300005353	Switchgrass Rhizosphere	SQKLLLGETIRGLEYAIDENGMWVRYHPGQYQESTSKNLKEYSVNGDVVRGVDENDGSLSDGKYARSVKFVAAVVK*
Ga0070675_1009208351	3300005354	Miscanthus Rhizosphere	IKSQTLLQSEQLRGLEYVIDKDGMWVRFHPSQYQESTSNKLKDYSVEGNIVRGTDDGGGNLSDGKYGRTVKFVAAFVN*
Ga0070671_1007371362	3300005355	Switchgrass Rhizosphere	VPPDAVAEEIKSQKLLLAETIRGLEYAIDENGMWVRYHPGQYQESTSKNLKEYSVNGDVVRGVDENDGKLSDGKYARSVKFVAAVVK*
Ga0070673_1006635522	3300005364	Switchgrass Rhizosphere	DNGMWVRFHPSQYQESSSNKIKNYSVAGDIVRGEDEGSGLSDKYSRSVKFVAAIIK*
Ga0070700_1015613911	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	ILLTDNPIPSEAVAEEIKSTPLLEGDKIRGLEYVIEENGMWVRFHPSQYQESGSNKLKDYKVENEIVRGFDDGGSLSDGKYARSVKFVAAITK*
Ga0070694_1010577721	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	TPIPPDAVAEEIKSTPLLEGEKLRGLEYVIDENSMWVRFHPGQYQESTSNKLKDYKVESDVVRGFDDNDGSLTDGKYSRSVKFVATIGK*
Ga0070662_1008041632	3300005457	Corn Rhizosphere	EEIRSATLLEGEKLRGLEYVIDDNGMWVRFHPSQYQESSSNKIKNYSVAGDIVRGEDEGSGLSDKYSRSVKFVAAIIK*
Ga0070662_1014460332	3300005457	Corn Rhizosphere	TPLLEGEKLRGLEYVIDENSMWVRFHPGQYQESTSNKLKDYKVESDVVRGFDDNDGSLTDGKYSRSVKFVATIGK*
Ga0068867_1009658351	3300005459	Miscanthus Rhizosphere	IPSEALTEEIKDQTLLLGEKIKGLEYVISENGMWVRFHPGQYQESTSNKLKDYSVEGDIVRGTDEGSDLSDGKYNRNVKFVAAIVK*
Ga0068852_1020100182	3300005616	Corn Rhizosphere	VLVTDKPIPPDALAEEIKSATLLEGEKLRGLEYVFDENGMWVRYHPSQYQESSSNKLKEYKVENGMVRGFDDNKGDLSDGKYARSVKFVAAIAK*
Ga0068859_1031328631	3300005617	Switchgrass Rhizosphere	TLLEGEKIRGLEYVIDGNGMWVRYHPGQYQESSSNKLKEFKEENGIVRGIDDNDGDLSNGKYPRSVKFVAVVGK*
Ga0068864_1003953843	3300005618	Switchgrass Rhizosphere	DKPVPPDAVAEEIKSQKLLLAETIRGLEYAIDENGMWVRYHPGQYQESTSKNLKEYSVNGDVVRGVDENDGKLSDGKYARSVKFVAAVVK*
Ga0068861_1010947062	3300005719	Switchgrass Rhizosphere	QTLLQSEQLRGLEYVIDKDGMWVRFHPSQYQESTSNKLKDYSVEGNIVRGTDDGGGNLSDGKYGRTVKFVAAFVN*
Ga0068861_1016503472	3300005719	Switchgrass Rhizosphere	PIPPDALAEEIKSATLLEGEKLRGLEYVIDENSMWVRFHPSQYQESSSNKLKEYKVENGIVRGVDENTGDLNDGKYARSVKFVATIAK*
Ga0068861_1023057751	3300005719	Switchgrass Rhizosphere	IPPEALSEEIKSQTMLLDEKIRGLEYAIDNDGMWVRYHPGQYQESTSNQLKDYVVEGDVVRGFDDNDGHLSDGKYSRKVKFVAAITK*
Ga0068858_1002567991	3300005842	Switchgrass Rhizosphere	EALAEEIKSATLLEGEKIRGLEYVFDDNGMWVRYHPSQYQESSSNKLKEYKVENGIVRGIDDNAGNLSDGKYARSVKFVATIAK*
Ga0068862_1005354963	3300005844	Switchgrass Rhizosphere	LEYVISENGMWVRFHPGQYQESTSNKLKDYSVEGDIVRGTDEGSDLSDGKYNRNVKFVAAIVK*
Ga0068862_1010038321	3300005844	Switchgrass Rhizosphere	AIPPDAISEEIKSQTLLQSEQLRGLEYVIDKDGMWVRFHPSQYQESSSNKLKDYSVDGNIVRGTDDGGGNLSDGKYGRTVKFVAAFVN*
Ga0082029_16254432	3300006169	Termite Nest	AEEIKSTPLLEGEKIRGLEYVMMDENSMWVRFHPSQYQESSSNKLKDYKVENDVVRGTDDDENNLSSGKYARSVKFVATIAK*
Ga0075428_1026166561	3300006844	Populus Rhizosphere	LLTDQPIPAEAVAEEIKSTPLLEGEKIRGLEYVIDENSMWVRFHPSQYQESGSNKLKEYKVENGIVRGVDENTSEFSDSRYARSVKFVAAIAK*
Ga0111539_121522362	3300009094	Populus Rhizosphere	KSQTLLQSEQLRGLEYVIDKDGMWVRFHPSQYQESTSNKLKDYSVEGNIVRGTDDGGGNLSDGKYGRTVKFVAAFVN*
Ga0111539_121815912	3300009094	Populus Rhizosphere	EYAIDENGMWVRYHPSQYQESSSNKIKDYKVENDIVRGFDDDAGSSLSDGKYARSVKFVAAITR*
Ga0105247_114686881	3300009101	Switchgrass Rhizosphere	LVILLTDQPIPADQLAEEIKSATLLEGSKLRGLEYVIDDNGMWVRFHPSQYQESSSNKLKNYRVEGDIVRGEDDGSGLSENYSRSVKFAAAIVK*
Ga0105243_125828181	3300009148	Miscanthus Rhizosphere	ILLTDKPIPPDAVAEEIKSTPLLEGDKIRGLEYVIDENGMWVRFHPSQYQESGSNKLKEYKVENDIVRGVDDNSGDLSSGKYARSVRFVAAIAK*
Ga0075423_113727691	3300009162	Populus Rhizosphere	AIDENGMWVRYHPSQYQESSSNKLKDYKVENDIVSGVDENEGNLSGGKYDRKVRFVASILK*
Ga0105241_108365271	3300009174	Corn Rhizosphere	EIKSATLLEGEKIRGLEYVFDDNGMWVRYHPSQYQESSSNKLKEYKVENGIVRGIDDNAGNLSDGKYARSVKFVATIAK*
Ga0105241_117619362	3300009174	Corn Rhizosphere	AEEIKSATLLEAEKIRGLEYVIDENSMWVRYHPSQYQESSSNKLKDYKVENGIVRGVDDNEGDLSNGKYARKVKFVATILK*
Ga0105248_103489021	3300009177	Switchgrass Rhizosphere	GLEYVFDDNGMWVRYHPSQYQESSSNKLKEYKVENGIVRGIDDNAGNLSDGKYARSVKFVATIAK*
Ga0105248_115668441	3300009177	Switchgrass Rhizosphere	TPLLEGEKIRGLEYVIDENSMWVRYHPSQYQESSSNKLKDYKVENDVVSAFDDNDGDLSNGKYARKVKFAAAIVK*
Ga0105248_123439742	3300009177	Switchgrass Rhizosphere	EALAEEIKSATLLEGEKLRGLEYVFDENGMWVRYHPSQYQESSSNKLKEYKVENGIVRGFDDNKGDLSDGKYARSVKFVAAIAK*
Ga0105249_122612591	3300009553	Switchgrass Rhizosphere	IIILVTDKPIPSEALTEEIKDQTLLLGEKIKGLEYVISENGMWVRFHPGQYQESTSNKLKDYSVEGDIVRGTDEGSDLSDGKYNRNVKFVAAIVK*
Ga0126380_118617181	3300010043	Tropical Forest Soil	PIPPEAVAEEIKSTPLMEGDKIRGLEYVIDETSMWVRFHPGQYQESGSNKLKDYKVENDIVRGVDENDGSLSDGRYARSVKFAATIIK*
Ga0126384_117327542	3300010046	Tropical Forest Soil	QPIPPDAVAEEIKSTPLLESEKIRGLEYSFEKQGHWVRYHPGQYQESLTSPIKEYIVENGVVRGFDDDNGDLTNGKYSRSVRFAAALNKR*
Ga0126377_106561732	3300010362	Tropical Forest Soil	AEEIKSATLLEGEKLRGLEYVFDDNGMWVRYHPSQYQESSSNKLKEYKVENGIVRGIDDNSGNLSDGKYARSVKFVAAIAK*
Ga0134128_131275191	3300010373	Terrestrial Soil	TPLLEGNKIRGLEYAIDENGMWVRYHPSQYQESGTNKLKDYKVENDTVRGVDENESSFSDAKYSRSVKFVAAIIK*
Ga0134124_103458291	3300010397	Terrestrial Soil	KSATLLEGEKLRGLEYVFDENGMWVRYHPSQYQESSSNKLKEYKVENGIVRGFDDNKGDLSDGKYARSVKFVAAIAK*
Ga0134124_108013182	3300010397	Terrestrial Soil	LVVLVTDKPIPPEALAEEIKEATLLEGEKIRGLEYVFDDNGMWVRYHPSQYQESSSNKLKEYKVENGIVRGFDDNVSNLSDGKYTRSVKFVAAIAK*
Ga0134127_104567613	3300010399	Terrestrial Soil	LVTDKPIPSEALTEEIKDQTLLLGEKIKGLEYVISENGMWVRFHPGQYQESTSNKLKDYSVEGDIVRGTDEGSDLSDGKYNRNVKFVAAIVK*
Ga0138514_1000410331	3300011003	Soil	RGLEYAMMDENSMWVRFHPGQYQESSSNKIKDYKVENDIVRGMDDDESNLSSGKYARSVKFVAAIAK*
Ga0105246_122630221	3300011119	Miscanthus Rhizosphere	SMVILLTDKPIPPDAVAEEIKSQKLLLGETIRGLEYAIDENGMWVRYHPGQYQESTSKNLKEYSVNGDVVRGVDENDGSLSDGKYARSVKFVAAVVK*
Ga0120182_10092782	3300011993	Terrestrial	MMDENSMWVRYHPGQYQESSSNKLKDYKVENDVVRGTDDNDGDLSNGKYPRSVKFVATIAK*
Ga0157318_10063722	3300012482	Arabidopsis Rhizosphere	EYVIDENGMWVRYHPGQYQESTSKNLKEYSVNGDVVRGVDENDGKLSDGRYARSVKFVAAVVK*
Ga0157354_10030871	3300012517	Unplanted Soil	MVILLTDKPIPPDAVAEEIKSQKLLLAETIRGLEYAIDENGMWVRYHPGQYQESTSKNLKEYSVNGDVVRGVDENDGSLSDGKYARSVKFVAAVVK*
Ga0157306_101148481	3300012912	Soil	EYVIEENGMWVRFHPSQYQESGSNKLKDYKVENEIVRGFDDGGSLTDGKYARSVKFVAAITK*
Ga0164303_104855452	3300012957	Soil	YPIDENGMWVRYHPSQYQESSSNKLKDYKVENDIVSGVDENEGNLSGGKYDRKVRFVASILK*
Ga0164303_106581151	3300012957	Soil	GNESIVILLTDKPIPPDAISEEIKSQTLLQSEQLRGLEYVIDKDGMWVRFHPSQYQESSSNKLKDYSVDGNIVRGTDDGGGNLSDGKYGRTVKFVAAFVN*
Ga0157374_129040522	3300013296	Miscanthus Rhizosphere	RGLEYAIDNDGMWVRYHPGQYQESTSNQLKDYVVEGDVVRGFDDNDGHLSDGKYSRKVKFVAAITK*
Ga0163162_111425842	3300013306	Switchgrass Rhizosphere	AISEEIKSQTLLQSEQLRGLEYVIDKDGMWVRFHPSQYQESSSNKLKDYSVDGNIVRGTDDGGGNLSDGKYGRTVKFVAAFVN*
Ga0163162_111440052	3300013306	Switchgrass Rhizosphere	AISEEIKSQTLLQSEQLRGLEYVIDKDGMWVRFHPSQYQESTSNKLKDYSVEGNIVRGTDDGGGNLSDGKYGRTVKFVAAFVN*
Ga0163162_130754811	3300013306	Switchgrass Rhizosphere	KPIPPEALAEEIKSATLLEGEKIRGLEYVFDDNGMWVRYHPSQYQESSSNKLKEYKVENGIVRGIDDNAGNLSDGKYARSVKFVATIAK*
Ga0157372_118835312	3300013307	Corn Rhizosphere	IDDNGMWVRFHPSQYQESSGNKLKNYRVEGDIVRGEDDGSGLSENYSRSVKFVAAIVK*
Ga0157375_117117261	3300013308	Miscanthus Rhizosphere	KPIPPDAISEEIKSQTLLQSEQLRGLEYVIDKDGMWVRFHPSQYQESTSNKLKDYSVEGNIVRGTDDGGGNLSDGKYGRTVKFVAAFVN*
Ga0163163_114891112	3300014325	Switchgrass Rhizosphere	LEGEKIRGLEYVFDDNGMWVRYHPNQYQESSSNKLKEYKVENGIVRGIDDNAGNLSDGKYARSVKFVATIAK*
Ga0157380_131726621	3300014326	Switchgrass Rhizosphere	VAEEIKNSSLLEGNKLRGLEYVIEDNGMWVRFHPGQYQESGTMKLKEYKVENDIVRGVDENDGSLTDGKYVRSVKFAAAITK*
Ga0132256_1002170851	3300015372	Arabidopsis Rhizosphere	LEYVIDENGMWVRYHPGQYQESTSKNLKEYSVNGDVVRGVDENDGKLSDGRYARSVKFVAAVVK*
Ga0132257_1012595202	3300015373	Arabidopsis Rhizosphere	AVAEEIKSQKLLLAETIRGLEYAIDENGMWVRYHPGQYQESTSKNLKEYSVNGDVVRGVDENDGKLSDGKYARSVKFVAAVVK*
Ga0132255_1040814732	3300015374	Arabidopsis Rhizosphere	QTMLLDEKIRGLEYAIDNDGMWVRYHPGQYQESTSNQLKDYVVEGDVVRGFDDNDGHLSDGKYSRKVKFVAAITK*
Ga0173479_104536392	3300019362	Soil	PAEAVAEEIKSTPLLEGDKIRGLEYVIEENGMWVRFHPSQYQESGSNKLKEYKVENEIVRGVDDDGAGSLSDGKYSRSVKFVAAITK
Ga0190264_114100031	3300019377	Soil	IPLLEGEKIRGLEYVLDENSMWVRFHPGQYQESTSNKLKEYKVENNVVSGIDDNDGNLTDGKYARSVKFVAALTK
Ga0207697_102416522	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	KPIPPEALAEEIKEATLLEGEKIRGLEYVFDDNGMWVRYHPSQYQESSSNKLKEYKVENGIVRGFDDNVSNLSDGKYTRSVKFVAAIAK
Ga0210113_10479552	3300025796	Natural And Restored Wetlands	PIPADAVAEELKSTPMLDGEKIRGLEYVLDESSMWVRFHPGQYQESTSNKLKDYKLENDVVRGFDDNDGSLTDGKYKRNVKFVAALTK
Ga0207680_103865352	3300025903	Switchgrass Rhizosphere	IKSQKLLLGETIRGLEYAIDENGMWVRYHPGQYQESTSKNLKEYSVNGDVVRGVDENDGSLSDGKYARSVKFVAAVVK
Ga0207647_104852341	3300025904	Corn Rhizosphere	DKPIPPDAISEEIKSQTLLQSEQLRGLEYVIDKDGMWVRFHPSQYQESSSNKLKDYSVDGNIVRGTDDGGGNLSDGKYGRTVKFVAAFVN
Ga0207647_107458631	3300025904	Corn Rhizosphere	KLRGLEYVIDDNGMWVRFHPSQYQESSSNKIKNYSVAGDIVRGEDEGSGLSDKYSRSVKFVAAIIK
Ga0207654_109526491	3300025911	Corn Rhizosphere	ESIVILLTDKPIPPDAISEEIKSQTLLQSEQLRGLEYVIDKDGMWVRFHPSQYQESSSNKLKDYSVDGNIVRGTDDGGGNLSDGKYGRTVKFVAAFVN
Ga0207660_117074351	3300025917	Corn Rhizosphere	EYVIDDNGMWVRFHPSQYQESSSNKIKNYSVAGDIVRGEDEGSGLSDKYSRSVKFVAAII
Ga0207662_111774491	3300025918	Switchgrass Rhizosphere	LIILLTDNPIPSEAVAEEIKSTPLLEGDKIRGLEYVIEENGMWVRFHPSQYQESGSNKLKDYKVENEIVRGFDDGGSLSDGKYARSVKFVAAITK
Ga0207701_109593632	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	GLEYVIDKDGMWVRFHPSQYQESTSNKLKDYSVEGNIVRGTDDGGGNLSDGKYGRTVKFVAAFVN
Ga0207706_116076532	3300025933	Corn Rhizosphere	NGMWVRFHPSQYQESSSNKIKNYSVAGDIVRGEDEGSGLSDKYSRSVKFVAAIIK
Ga0207669_111054971	3300025937	Miscanthus Rhizosphere	FGTESIIVLITDKPIPADAISEEIKSQKLLLDEQIRGLEYVLDKESMWVRFHPGQYQESTSNKLKEYSVEGDVVRGVDDNDGNLTDGKYSRKVKFVAAIVK
Ga0207711_103103143	3300025941	Switchgrass Rhizosphere	DAISEEIKSQTLLQSEQLRGLEYVIDKDGMWVRFHPSQYQESTSNKLKDYSVDGNIVRGTDDGGGNLSDGKYGRTVKFVAAFVN
Ga0207711_115883712	3300025941	Switchgrass Rhizosphere	EEIKSATMLEGEKIRGLEYVFDDNGMWVRYHPGQYQESSSNKLKEYKVENGIVRGFDDNKGDLSDGKYARSVKFVAAIAK
Ga0207689_103432711	3300025942	Miscanthus Rhizosphere	GRGERFSEESIIILVTDKPIPSEALTEEIKDQTLLLGEKIKGLEYVISENGMWVRFHPGQYQESTSNKLKDYSVEGDIVRGTDEGSDLSDGKYNRNVKFVAAIVK
Ga0207651_105787811	3300025960	Switchgrass Rhizosphere	GLEYVIDDNGMWVRFHPSQYQESSSNKIKNYSVAGDIVRGEDEGSGLSDKYSRSVKFVAAIIK
Ga0207651_106348431	3300025960	Switchgrass Rhizosphere	SMVILLTDKPVPPDAVAEEIKSQKLLLAETIRGLEYAIDENGMWVRYHPGQYQESTSKNLKEYSVNGDVVRGVDENDGKLSDGKYARSVKFVAAVVK
Ga0207712_103525983	3300025961	Switchgrass Rhizosphere	QTLLQSEQLRGLEYVIDKDGMWVRFHPSQYQESSSNKLKDYSVDGNIVRGTDDGGGNLSDGKYGRTVKFVAAFVN
Ga0207712_114303312	3300025961	Switchgrass Rhizosphere	KSQTLLQSEQLRGLEYVIDKDGMWVRFHPSQYQESTSNKLKDYSVEGNIVRGTDDGGGNLSDGKYGRTVKFVAAFVN
Ga0207640_105169741	3300025981	Corn Rhizosphere	IKSQKLLLGETIRGLEYAIDENGMWVRYHPGQYQESTSKNLKAYSVNGDVVRGVDENDGSLSDGKYARSVKFVAAVVK
Ga0207703_104867681	3300026035	Switchgrass Rhizosphere	VILLTDKPIPPDAISEEIKSQTLLQSEQLRGLEYVIDKDGMWVRFHPSQYQESSSNKLKDYSVDGNIVRGTDDGGGNLSDGKYGRTVKFVAAFVN
Ga0207639_118568961	3300026041	Corn Rhizosphere	SQTMLLDEKIRGLEYAIDNDGMWVRYHPGQYQESTSNQLKDYVVEGDVVRGFDDNDGHLSDGKYSRKVKFVAAITK
Ga0207641_100425381	3300026088	Switchgrass Rhizosphere	LLEAEKLRGLEYVIDENSMWVRYHPSQYQESSSNKLKDYKVENGIVRGVDDNEGDLSNGKYARKVKFVATILK
Ga0207648_108928531	3300026089	Miscanthus Rhizosphere	SEESIIILVTDKPIPSEALTEEIKDQTLLLGEKIKGLEYVISENGMWVRFHPGQYQESTSNKLKDYSVEGDIVRGTDEGSDLSDGKYNRNVKFVAAIVK
Ga0207676_101515861	3300026095	Switchgrass Rhizosphere	AVAEEIKSTPLLEGEKLRGLEYVIDENSMWVRFHPGQYQESTSNKLKDYKVESDVVRGFDDNDGSLTDGKYSRSVKFVATIGK
Ga0207674_108372441	3300026116	Corn Rhizosphere	EYVIDENSMWVRYHPSQYQESSSNKLKDYKVENDVVSAFDDNDGDLSNGKYARKVKFAAAIVK
Ga0207683_108225561	3300026121	Miscanthus Rhizosphere	FGQESMVILLTDKPIPPDAVAEEIKSQKLLLGETIRGLEYAIDENGMWVRYHPGQYQESTSKNLKEYSVNGDVVRGVDENDGSLSDGKYARSVKFVAAVVK
Ga0209799_10402781	3300027654	Tropical Forest Soil	LLEGEKIRGLEYSIEENNLWVRYHPSQYQESGTNNLKEYKVENNIVRGVDENSGSLSNGKYSRSVKFVATIMK
Ga0268265_110511502	3300028380	Switchgrass Rhizosphere	SEEIKSQTLLQSEQLRGLEYVIDKDGMWVRFHPSQYQESSSNKLKDYSVDGNIVRGTDDGGGNLSDGKYGRTVKFVAAFVN
Ga0268265_110765492	3300028380	Switchgrass Rhizosphere	DAISEEIKSQTLLQSEQLRGLEYVIDKDGMWVRFHPSQYQESTSNKLKDYSVEGNIVRGTDDGGGNLSDGKYGRTVKFVAAFVN
Ga0268264_100411661	3300028381	Switchgrass Rhizosphere	QTMLLEKIRGLEYAIDNDGMWVRYHPGQYQESTSNQLKDYVVEGDVVRGFDDNDGHLSDGKYSRKVKFVAAITK
Ga0268264_118295721	3300028381	Switchgrass Rhizosphere	QPDAVAEEIKSQKLLLGETIRGLEYAIDENGMWVRYHPGQYQESTSKNLKEYSVNGDVVRGVDENDGSLSDGKYARSVKFVAAVVK
Ga0310813_104359111	3300031716	Soil	EYAIDENGMWVRYHPSQYQESSSNKLKDYKVENDIVRGVDDNETNLSDGRYDRKVRFVAAIIK
Ga0307473_107507341	3300031820	Hardwood Forest Soil	LLEGEKIRGLEYAIDENGMWVRYHPSQYQESGTNKLKEYKVENEIVRGVDENDGSLSNGKYARSVKFVAAIVK
Ga0310892_109647932	3300031858	Soil	EIKSTPLLEGDKIRGLEYVIDENGMWVRFHPSQYQESGSNKLKEYKVENDIVRGVDDEGGGSLSDGKYARSVKFVAAITK

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.47
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.47
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F071617

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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