Metagenome Family F071616

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F071616
Family Type	Metagenome
Number of Sequences	122
Average Sequence Length	80 residues
Representative Sequence	IVFLNATNDENAPFREAQSLYESTPGTKHLYAVKARGHHFEGGEKEFYQDLDQGLTQIADKSDNKLKEI
Number of Associated Samples	99
Number of Associated Scaffolds	122

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	98.36 %
% of genes from short scaffolds (< 2000 bps)	95.90 %
Associated GOLD sequencing projects	87
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.38

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (89.344 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere (13.934 % of family members)
Environment Ontology (ENVO)	Unclassified (52.459 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (79.508 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 21.65% β-sheet: 9.28% Coil/Unstructured: 69.07%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.38
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.38
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 122 Family Scaffolds
PF13533	Biotin_lipoyl_2	12.30
PF10142	PhoPQ_related	8.20
PF00005	ABC_tran	5.74
PF00664	ABC_membrane	2.46
PF00529	CusB_dom_1	2.46
PF00873	ACR_tran	1.64
PF12847	Methyltransf_18	0.82
PF03544	TonB_C	0.82
PF12695	Abhydrolase_5	0.82
PF00115	COX1	0.82
PF12833	HTH_18	0.82
PF00163	Ribosomal_S4	0.82

COG ID	Name	Functional Category	% Frequency in 122 Family Scaffolds
COG0522	Ribosomal protein S4 or related protein	Translation, ribosomal structure and biogenesis [J]	0.82
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	0.82

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	89.34 %
Unclassified	root	N/A	10.66 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	89.34 %
Unclassified	root	N/A	10.66 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	89.34 %
Unclassified	root	N/A	10.66 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	59.84 %
Unclassified	root	N/A	10.66 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	5.74 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	3.28 %

Name	Rank	Taxonomy	Distribution
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	54.10 %
Unclassified	root	N/A	10.66 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	4.92 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3.28 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.64 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.82 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.82 %

Name	Rank	Taxonomy	Distribution
unclassified Blastocatellia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia	54.10 %
Unclassified	root	N/A	10.66 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	4.92 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	2.46 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	1.64 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	0.82 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	0.82 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.82 %

Name	Rank	Taxonomy	Distribution
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	54.10 %
Unclassified	root	N/A	10.66 %
Pseudanabaenales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales	3.28 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2.46 %
Bryobacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae	1.64 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	0.82 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	0.82 %
Synechococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales	0.82 %
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	0.82 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.82 %

Name	Rank	Taxonomy	Distribution
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	54.10 %
Unclassified	root	N/A	10.66 %
Pseudanabaenaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales → Pseudanabaenaceae	3.28 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2.46 %
Bryobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter	1.64 %
Chamaesiphonaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Chamaesiphonaceae	0.82 %
Rivulariaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Rivulariaceae	0.82 %
Bacillaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae	0.82 %
Verrucomicrobia subdivision 3	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3	0.82 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.82 %

Name	Rank	Taxonomy	Distribution
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	54.10 %
Unclassified	root	N/A	10.66 %
Pseudanabaena	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales → Pseudanabaenaceae → Pseudanabaena	3.28 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2.46 %
Bryobacter aggregatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	1.64 %
Pontibacillus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae → Pontibacillus	0.82 %
Rivularia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Rivulariaceae → Rivularia	0.82 %
Chamaesiphon	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Chamaesiphonaceae → Chamaesiphon	0.82 %
Pedosphaera	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera	0.82 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.82 %

Name	Rank	Taxonomy	Distribution
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	54.10 %
Unclassified	root	N/A	10.66 %
Pseudanabaena biceps	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales → Pseudanabaenaceae → Pseudanabaena → Pseudanabaena biceps	3.28 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2.46 %
Bryobacter aggregatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	1.64 %
unclassified Rivularia (in: Bacteria)	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Rivulariaceae → Rivularia → unclassified Rivularia (in: Bacteria)	0.82 %
Chamaesiphon minutus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Chamaesiphonaceae → Chamaesiphon → Chamaesiphon minutus	0.82 %
Pontibacillus marinus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae → Pontibacillus → Pontibacillus marinus	0.82 %
Pedosphaera parvula	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	0.82 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.82 %

Name	Rank	Taxonomy	Distribution
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	54.10 %
Unclassified	root	N/A	10.66 %
Pseudanabaena biceps	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales → Pseudanabaenaceae → Pseudanabaena → Pseudanabaena biceps	3.28 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2.46 %
Bryobacter aggregatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	1.64 %
Rivularia sp. PCC 7116	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Rivulariaceae → Rivularia → unclassified Rivularia (in: Bacteria) → Rivularia sp. PCC 7116	0.82 %
Chamaesiphon minutus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Chamaesiphonaceae → Chamaesiphon → Chamaesiphon minutus	0.82 %
Pontibacillus marinus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae → Pontibacillus → Pontibacillus marinus	0.82 %
Pedosphaera parvula	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	0.82 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.82 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000956\|JGI10216J12902_100143941	All Organisms → cellular organisms → Bacteria	860	Open in IMG/M
3300003324\|soilH2_10099316	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1814	Open in IMG/M
3300004157\|Ga0062590_101736077	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae → Pontibacillus → Pontibacillus marinus	637	Open in IMG/M
3300004479\|Ga0062595_101615749	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	605	Open in IMG/M
3300004643\|Ga0062591_102540496	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	539	Open in IMG/M
3300005290\|Ga0065712_10048559	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	627	Open in IMG/M
3300005295\|Ga0065707_10026924	All Organisms → cellular organisms → Bacteria	1852	Open in IMG/M
3300005295\|Ga0065707_10927342	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	559	Open in IMG/M
3300005329\|Ga0070683_101780613	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales → Pseudanabaenaceae → Pseudanabaena → Pseudanabaena biceps	592	Open in IMG/M
3300005331\|Ga0070670_100983840	All Organisms → cellular organisms → Bacteria	767	Open in IMG/M
3300005331\|Ga0070670_101936339	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	543	Open in IMG/M
3300005334\|Ga0068869_101489155	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales → Pseudanabaenaceae → Pseudanabaena → Pseudanabaena biceps	601	Open in IMG/M
3300005334\|Ga0068869_102078246	Not Available	510	Open in IMG/M
3300005336\|Ga0070680_101491602	Not Available	586	Open in IMG/M
3300005343\|Ga0070687_100651584	All Organisms → cellular organisms → Bacteria	730	Open in IMG/M
3300005345\|Ga0070692_10182858	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1216	Open in IMG/M
3300005354\|Ga0070675_101829457	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	560	Open in IMG/M
3300005355\|Ga0070671_100628963	Not Available	929	Open in IMG/M
3300005356\|Ga0070674_101883013	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	543	Open in IMG/M
3300005364\|Ga0070673_101618350	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	612	Open in IMG/M
3300005365\|Ga0070688_101710526	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	515	Open in IMG/M
3300005440\|Ga0070705_100422455	Not Available	993	Open in IMG/M
3300005440\|Ga0070705_101810236	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	518	Open in IMG/M
3300005440\|Ga0070705_101828334	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Chamaesiphonaceae → Chamaesiphon → Chamaesiphon minutus	516	Open in IMG/M
3300005441\|Ga0070700_100506696	All Organisms → cellular organisms → Bacteria	929	Open in IMG/M
3300005444\|Ga0070694_101368145	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales → Pseudanabaenaceae → Pseudanabaena → Pseudanabaena biceps	597	Open in IMG/M
3300005445\|Ga0070708_101795751	All Organisms → cellular organisms → Bacteria	569	Open in IMG/M
3300005455\|Ga0070663_101678517	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	568	Open in IMG/M
3300005459\|Ga0068867_101443928	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	639	Open in IMG/M
3300005467\|Ga0070706_102123802	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	508	Open in IMG/M
3300005468\|Ga0070707_101363333	All Organisms → cellular organisms → Bacteria	676	Open in IMG/M
3300005535\|Ga0070684_101459351	All Organisms → cellular organisms → Bacteria	644	Open in IMG/M
3300005535\|Ga0070684_101662025	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales → Pseudanabaenaceae → Pseudanabaena → Pseudanabaena biceps	602	Open in IMG/M
3300005539\|Ga0068853_101373813	All Organisms → cellular organisms → Bacteria	683	Open in IMG/M
3300005545\|Ga0070695_100024721	All Organisms → cellular organisms → Bacteria → Acidobacteria	3703	Open in IMG/M
3300005545\|Ga0070695_101901591	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	500	Open in IMG/M
3300005546\|Ga0070696_101789599	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Rivulariaceae → Rivularia → unclassified Rivularia (in: Bacteria) → Rivularia sp. PCC 7116	531	Open in IMG/M
3300005547\|Ga0070693_101642412	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	506	Open in IMG/M
3300005549\|Ga0070704_101487852	All Organisms → cellular organisms → Bacteria → Acidobacteria	623	Open in IMG/M
3300005549\|Ga0070704_101538366	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	612	Open in IMG/M
3300005563\|Ga0068855_101938502	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	596	Open in IMG/M
3300005577\|Ga0068857_100183995	Not Available	1902	Open in IMG/M
3300005578\|Ga0068854_100804268	All Organisms → cellular organisms → Bacteria	820	Open in IMG/M
3300005578\|Ga0068854_100932145	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	765	Open in IMG/M
3300005615\|Ga0070702_100684519	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	780	Open in IMG/M
3300005616\|Ga0068852_100524907	All Organisms → cellular organisms → Bacteria	1182	Open in IMG/M
3300005617\|Ga0068859_101089486	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	878	Open in IMG/M
3300005618\|Ga0068864_102034813	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	581	Open in IMG/M
3300005840\|Ga0068870_10433225	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	863	Open in IMG/M
3300005840\|Ga0068870_11279603	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	534	Open in IMG/M
3300005841\|Ga0068863_100524899	All Organisms → cellular organisms → Bacteria	1168	Open in IMG/M
3300005841\|Ga0068863_101249547	All Organisms → cellular organisms → Bacteria	749	Open in IMG/M
3300005843\|Ga0068860_101642349	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	664	Open in IMG/M
3300005886\|Ga0075286_1067437	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	521	Open in IMG/M
3300006058\|Ga0075432_10377700	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	607	Open in IMG/M
3300006169\|Ga0082029_1715307	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	529	Open in IMG/M
3300006237\|Ga0097621_100084596	All Organisms → cellular organisms → Bacteria	2645	Open in IMG/M
3300006804\|Ga0079221_10921253	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	644	Open in IMG/M
3300006852\|Ga0075433_10238408	All Organisms → cellular organisms → Bacteria	1615	Open in IMG/M
3300006852\|Ga0075433_10405304	All Organisms → cellular organisms → Bacteria	1203	Open in IMG/M
3300006852\|Ga0075433_11016719	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	722	Open in IMG/M
3300006871\|Ga0075434_100439505	All Organisms → cellular organisms → Bacteria → Acidobacteria	1326	Open in IMG/M
3300006904\|Ga0075424_102000009	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	611	Open in IMG/M
3300006954\|Ga0079219_11880437	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	564	Open in IMG/M
3300009098\|Ga0105245_11222154	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	799	Open in IMG/M
3300009101\|Ga0105247_10265494	Not Available	1178	Open in IMG/M
3300009156\|Ga0111538_12687822	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	624	Open in IMG/M
3300009174\|Ga0105241_10768356	Not Available	885	Open in IMG/M
3300009176\|Ga0105242_11805510	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	650	Open in IMG/M
3300009177\|Ga0105248_10150181	All Organisms → cellular organisms → Bacteria	2628	Open in IMG/M
3300009177\|Ga0105248_11634605	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	730	Open in IMG/M
3300009545\|Ga0105237_11205932	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	763	Open in IMG/M
3300009553\|Ga0105249_12148289	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	631	Open in IMG/M
3300010046\|Ga0126384_11354621	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	662	Open in IMG/M
3300010047\|Ga0126382_11167817	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	687	Open in IMG/M
3300010375\|Ga0105239_12672970	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	582	Open in IMG/M
3300010375\|Ga0105239_12991958	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	551	Open in IMG/M
3300010399\|Ga0134127_11389680	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	773	Open in IMG/M
3300010399\|Ga0134127_11706777	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	705	Open in IMG/M
3300010400\|Ga0134122_10303059	All Organisms → cellular organisms → Bacteria	1372	Open in IMG/M
3300010400\|Ga0134122_10748474	Not Available	925	Open in IMG/M
3300011119\|Ga0105246_11908294	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	570	Open in IMG/M
3300012899\|Ga0157299_10086850	All Organisms → cellular organisms → Bacteria	783	Open in IMG/M
3300012899\|Ga0157299_10305564	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	528	Open in IMG/M
3300012988\|Ga0164306_10866026	All Organisms → cellular organisms → Bacteria	733	Open in IMG/M
3300013100\|Ga0157373_10927898	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	647	Open in IMG/M
3300013307\|Ga0157372_10998672	Not Available	969	Open in IMG/M
3300013307\|Ga0157372_12929690	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	546	Open in IMG/M
3300013308\|Ga0157375_12140465	All Organisms → cellular organisms → Bacteria	666	Open in IMG/M
3300014325\|Ga0163163_12923925	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	533	Open in IMG/M
3300014487\|Ga0182000_10231841	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	728	Open in IMG/M
3300014745\|Ga0157377_11102756	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	608	Open in IMG/M
3300014745\|Ga0157377_11550490	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	529	Open in IMG/M
3300014969\|Ga0157376_10993895	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	861	Open in IMG/M
3300015372\|Ga0132256_102583848	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	608	Open in IMG/M
3300015372\|Ga0132256_103298074	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	543	Open in IMG/M
3300015373\|Ga0132257_102820071	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	633	Open in IMG/M
3300025885\|Ga0207653_10345199	Not Available	581	Open in IMG/M
3300025907\|Ga0207645_10280577	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1106	Open in IMG/M
3300025908\|Ga0207643_10392019	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	877	Open in IMG/M
3300025911\|Ga0207654_10373039	Not Available	987	Open in IMG/M
3300025912\|Ga0207707_10041578	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	4014	Open in IMG/M
3300025918\|Ga0207662_11001095	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	593	Open in IMG/M
3300025931\|Ga0207644_10420645	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1095	Open in IMG/M
3300025937\|Ga0207669_11045259	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	688	Open in IMG/M
3300025938\|Ga0207704_11695155	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	543	Open in IMG/M
3300025940\|Ga0207691_10547147	Not Available	982	Open in IMG/M
3300025944\|Ga0207661_11492370	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	620	Open in IMG/M
3300025949\|Ga0207667_11675179	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	603	Open in IMG/M
3300025960\|Ga0207651_11119700	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	706	Open in IMG/M
3300025981\|Ga0207640_10250401	All Organisms → cellular organisms → Bacteria → Acidobacteria	1375	Open in IMG/M
3300026088\|Ga0207641_11193719	All Organisms → cellular organisms → Bacteria	760	Open in IMG/M
3300026088\|Ga0207641_11573119	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	659	Open in IMG/M
3300026116\|Ga0207674_10190324	Not Available	2002	Open in IMG/M
3300026116\|Ga0207674_10809360	All Organisms → cellular organisms → Bacteria	904	Open in IMG/M
3300026118\|Ga0207675_100413369	All Organisms → cellular organisms → Bacteria	1331	Open in IMG/M
3300027775\|Ga0209177_10086791	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	967	Open in IMG/M
3300031716\|Ga0310813_11456740	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	636	Open in IMG/M
3300031944\|Ga0310884_10730570	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	601	Open in IMG/M
3300032075\|Ga0310890_11377785	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	578	Open in IMG/M
3300032180\|Ga0307471_103949148	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	524	Open in IMG/M
3300032421\|Ga0310812_10040445	All Organisms → cellular organisms → Bacteria	1756	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	56.56%
Environmental	Environmental	43.44%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	56.56%
Terrestrial	Environmental → Terrestrial	43.44%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	43.44%
Rhizosphere	Host-Associated → Plants → Rhizosphere	32.79%
Rhizoplane	Host-Associated → Plants → Rhizoplane	22.13%
Roots	Host-Associated → Plants → Roots	1.64%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	21.31%
Loam	Environmental → Terrestrial → Soil → Loam	21.31%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	21.31%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	20.49%
Soil	Host-Associated → Plants → Rhizosphere → Soil	11.48%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.64%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.64%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.82%

Habitat	Taxonomy	Distribution
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	21.31%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	21.31%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	20.49%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	12.30%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	11.48%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.74%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.64%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.64%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.64%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.82%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.82%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.82%

Habitat	Taxonomy	Distribution
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	13.93%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	8.20%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	6.56%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	5.74%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.74%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	4.92%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	4.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.10%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	4.10%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	4.10%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.28%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	3.28%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.28%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.46%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.46%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.46%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.46%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.46%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.64%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	1.64%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.64%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.64%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.82%
Termite Nest	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest	0.82%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.82%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.82%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.82%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.82%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.82%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.82%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300003324	Sugarcane bulk soil Sample H2	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005886	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_205	Environmental	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006169	Termite nest microbial communities from Madurai, India	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012899	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S058-202B-2	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014487	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG	Environmental	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032421	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10216J12902_1001439412	3300000956	Soil	FTHGTPGEKVFDARQYLKKLKQTPIVFLNATDDKNAPLHEAQSLYEVAPCAKRFYAVKAGGHHFEGGEKEFYEDLDRGLSLSQIADKSDKNLQERGIATS*
soilH2_100993162	3300003324	Sugarcane Root And Bulk Soil	VFLNATDDDTAPFDEAQSLYASTAGAKRLYVVKANGHHFEGGEQEFYRDLDEDLSEQQIADKRDNKLKEATIATR*
Ga0062590_1017360771	3300004157	Soil	GTPSEKLFDAYQYLKKLKQTPIVFLNATSDDTAPLREAQSLYEATPGAKHFYAVKASGHHFEGGEQEFYKDLDLGLALPQIADKDDNKLKETAGAPR*
Ga0062595_1016157491	3300004479	Soil	KLKQTPIVFLNALNDKNAPFREAQSLYEATPATKRIFAVKASGHHFEGGEKEFYQDLDQGLTQIADKTDNKVKEI*
Ga0062591_1025404961	3300004643	Soil	KKLDHTPIVFLNATNDDSAPLREAKSLYETAPGSKHLFAVEARGHHFEGGEQEFYRDLDLGLSSPQIADKSDKKLKET*
Ga0065712_100485591	3300005290	Miscanthus Rhizosphere	DVHQYLKKLKQTPIVFLNATSDKNAPFREAQSLYEATPSAKRLYAVKASGHHFEGGEKEFYQDLDQGLTQIADKSDNKMKEI*
Ga0065707_100269242	3300005295	Switchgrass Rhizosphere	LNATSDKNAPFREAQSLYDVIPGAKHFYAVKASGHHFEGGEKEFYEDLDLGLSLPQIADKSDNKLKETEVGRD*
Ga0065707_109273421	3300005295	Switchgrass Rhizosphere	IFLNATSDKNAPFREAQSLYDVIPGAKHFYAVKASGHHFEGGEKEFYEDLDLGLSLPQIADKSDNKLKESEFARD*
Ga0070683_1017806131	3300005329	Corn Rhizosphere	QYLKKLKQTPIVFLNATSDRNAPFREAQSLYEATPSAKRLYAVKASGHHFEGGEKEFYQDLDQGLTQIADKSDNKVKEI*
Ga0070670_1009838402	3300005331	Switchgrass Rhizosphere	HEKVFDAHQYLKKLKQTPIVFLNATNDGDAPFHEAQSLYDATPGTKQLYAVKARGHHFEGGEKEFYQDLDQGLTQIADKTDKKLKEI*
Ga0070670_1019363391	3300005331	Switchgrass Rhizosphere	HGTPREKVFDIHPFLKSMKQTPIVFLNATSDKNAPFHEAQSLYDAIPGAKHFYAVKAKGHHFEGGEKEFYEDLDLGLSQQQIADKSDNKLKETAVARD*
Ga0068869_1014891551	3300005334	Miscanthus Rhizosphere	YLKKLKQTPIVFLNATNDKNAPFHEAQSLYEATPAAKRLFAVKASGHHFEGGEKEFYQDLDQGLTQIADKTDNKVKEI*
Ga0068869_1020782461	3300005334	Miscanthus Rhizosphere	LRKLGPTPIVFLNAIDDDTAPFSEAQSLYAATPGAKLFYAVKANGHHFEGGQEEFYHDLDQCLSQQQMADKTDNKLKEQNVAAR*
Ga0070680_1014916022	3300005336	Corn Rhizosphere	AQSLYEATPSAKRLYAVKASGHHFEGGEKEFYQDLDQGLTQIADKSDNKVKEI*
Ga0070687_1006515841	3300005343	Switchgrass Rhizosphere	THGTPHEKVFDIHPYLKSLKQTPIVFLNATSDTFAPFHEAQSLYDAIPGAKRFYAVKASGHHFEGGEKEFYEDLDRGISLQQIADKSDNKLKEQGVARD*
Ga0070692_101828581	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	EKLFDAHQYLRKLGQTPIVFLNATDDDNAPFGEAQSLYAATTGSKHLYAVKAHGHHFEGGEKEFYRDLDQGLLDQGVFTQQIADKTDNKLKDRSIAAR*
Ga0070675_1018294571	3300005354	Miscanthus Rhizosphere	HQYLRKLGQTPIVFLNATDDDNAPFSEAQSLYAATTGSKHLYAVKAHGHHFEGGEKEFYRDLDQGLLDQGIFTQQIADKTDNKLKDRSIAAR*
Ga0070671_1006289631	3300005355	Switchgrass Rhizosphere	ATNDKNAPFHEAQSLYEATPAAKRLFAVKASGHHFEGGEKEFYQDLDQGLTQIADKTDNKVKEI*
Ga0070674_1018830131	3300005356	Miscanthus Rhizosphere	PHEKVFDVHQYLKLLKQTPIVFLNAINDKSAPFHEAQSLYEATPAAKRLFAVKASGHHFEGGEKEFYQDLDQGLTQIADKTDNKVKEI*
Ga0070673_1016183501	3300005364	Switchgrass Rhizosphere	KLFDAHQYLRKLGQAPIVFLNATDDDTAPFDEAQSLYAATAGSKHLYAVKARGHHFEGGEKEFYRDLDQGLLDQELFAQQTADKTDNKLKDRTIAAR*
Ga0070688_1017105262	3300005365	Switchgrass Rhizosphere	DVHQYLKKLKQTPIVFLNATNDENAPFREAQSLYESTSGTKRLYAVKARGHHFEGGEKEFYQDLDQGLTQIADKSDNKLKEI*
Ga0070705_1004224552	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	EAQSLYEQAPGAKHFYVVKAKGHHFEGGEKEFYQDLDLGISLPQIAAKDDNKLKETGATPS*
Ga0070705_1018102361	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	PIVFLNATDDDTAPFDEAQSLYAATAGSKHLYAVKARGHHFEGGEKEFYRDLDQGLLDQDLFAQQTADKTDNKLKDRTIAAR*
Ga0070705_1018283341	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	PHEKVFDVNQYLKKLQTPIVFLNATSDTNAPFREAQSLYATAPGTKHLYAVKASGHHFEGGEKEFYQDLDQGLTQIADKSDNKVKERSVAAS*
Ga0070700_1005066962	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	FDAHQYLKKLKQPIVFLNAINDKNAPFREAQSLYEATPAAKRLFAVKASGHHFEGGEKEFYQDLDQGLTQIADKTDNKVKEI*
Ga0070694_1013681451	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	KKLKQTPIVFLNATNDKNAPFHEAQSLYEATPAAKRLFAVKASGHHFEGGEKEFYQDLDQGLTQIADKTDNKVKEI*
Ga0070708_1017957512	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	KKLKQTPIVFLNATNDDTSPFREAQSLYEATPGAKHFYAVKATGHHFEGGEKEFYQDLDLGLSLPQIADKVDKKLKETDAATR*
Ga0070663_1016785171	3300005455	Corn Rhizosphere	PIVFLNATNDENAPFREAQSLNEATPSAKRLYAVKASGHHFEGGEKEFYQDLDQGLTQIADKTDNKVKEI*
Ga0068867_1014439281	3300005459	Miscanthus Rhizosphere	HQYLKKLKQTPIVFLNATNDDTAPLREAQSLYEAVPSMKHLYAVKATGHHFEGGEQEFYHDLDLGLSLQQIADKDDNKLKEPGAASR*
Ga0070706_1021238021	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	SATDDSNAPFREAQSLYEAAASAKHLYAVKASGHHFEGGEKEFYQDLDMGLSLPQIADKSDNKLKETTVAAG*
Ga0070707_1013633331	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	FDAHQYLKRLKQTPIVFLSATDDSNAPFREAQSLYEAAASAKHLYAVKASGHHFEGGEKEFYQDLDMGLSLPQIADKSDNKLKETTVAAG*
Ga0070684_1014593512	3300005535	Corn Rhizosphere	IVFLNATDDDTAPLNEAKSLFAVAPGVKRFFAVKASGHHFEGGEEEFYRDLDLGVSPSQMVDNNNKKMKEIEARA
Ga0070684_1016620251	3300005535	Corn Rhizosphere	NEKVFDVHQYLKKLKQTPIVFLNATSDKNAPFREAQSLYEATPSAKRLYAVKASGHHFEGGEKEFYQDLDQGLTQIADKSDNKVKEI*
Ga0068853_1013738131	3300005539	Corn Rhizosphere	PIVFLNATNDDYAPFREAQSLYDATPGVKHLYAVKARGHHFEGGEQEFYNDLDQGLTQIADKSDNKLKEMQVAQK*
Ga0070695_1000247213	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	NQTPIVFLNATDDDTSPFREAQSLYEQAPGAKHFYVVKAKGHHFEGGEKEFYQDLDLGISLPQIAAKDDNKLKETGATPS*
Ga0070695_1019015911	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	TNDDNAPLREAKSLYETAPGSKHLFAVEARGHHFEGGEQEFYRDLDLGLSSPQIADKSDKKLKET*
Ga0070696_1017895991	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	THGTPHEKVFDINPYLKLLKQTPIVFLNATSDKYAPFREAQSLYDAIPGAKHFYAVNASGHHFEGGEKDFYEDLDQGLSQQQIADKSDNKLKEAEVARD*
Ga0070693_1016424122	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	QALYQATPGAKRFYAVKASGHHFEGGEKEFYDDLDQGLSLPQIADKDDNKLKETGPPAS*
Ga0070704_1014878521	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	NAPFREAQSLYEAAPGSKHLYAVKARGHHFEGGEKEFYQDLDQGLTQMADKSDNKLKEI*
Ga0070704_1015383662	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	DTAPFHEAQTLYEATPGAKHLYAVKATGHHFEGGEKEFYEDLDQGLSLPQIADKSDKKLKEIAGAKS*
Ga0068855_1019385022	3300005563	Corn Rhizosphere	KVFDVNQYLKKLQTPIVFLNATSDTNAPFREAQSLYATAPGTKHLYAVKASGHHFEGGEKEFYQDLDQGLTQIADKSDNKVKERSVAAS*
Ga0068857_1001839952	3300005577	Corn Rhizosphere	GDAPFHEAQSLYDATPGTKQLYAVKARGHHFEGGEKEFYQDLDQGLTQIADKTDKKLKEI
Ga0068854_1008042682	3300005578	Corn Rhizosphere	FLNATNDENAPFREAQSLYESTPGTKHLYAVKARGHHFEGGEKEFYQDLDQGLTQIADKSDNKLKEI*
Ga0068854_1009321452	3300005578	Corn Rhizosphere	KSLKQTPIVFLNATSDSFAPLREAQSLYDVIPGAKHFYAVKATGHHFEGGEKEFYEDLDRGISLQQIADKSDNKLKEPGVARD*
Ga0070702_1006845191	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	KYAPFREAQSLFEATPSAKRLYAVKASGHHFEGGEKEFYQDLDQGLTQIADKSDNKVKEI
Ga0068852_1005249071	3300005616	Corn Rhizosphere	THGTPHEKVFDIHPYLKSLKQTPIVFLNATSDKFAPFHDAQSLYDVIPGAKHFYAVRASGHHFEGGEKEFYEDLDLGISLQQIADKSDNKLKEREVARD*
Ga0068859_1010894861	3300005617	Switchgrass Rhizosphere	YITHGTPHEKVFDIHPYLKSLKQTPIVFLNATSDKFAPFHDAQSLYDVIPGAKHFYAVKASGHHFEGGEKEFYEDLDLGISLQQIADKSDNKLKEREVARD*
Ga0068864_1020348131	3300005618	Switchgrass Rhizosphere	SDKFAPFHDAQSLYDVIPGAKHFYAVKASGHHFEGGEKEFYEDLDLGISLQQIADKSDNKLKEREVARD*
Ga0068870_104332251	3300005840	Miscanthus Rhizosphere	TPREKAFDIHPFLKSLKQTPIVFLNATSDKNAPFHEAQLLYEVIPGAKRFYAVKASGHHFEGGEKEFYEDLDLGLSQQQIADKSDNKLKESEGARD*
Ga0068870_112796031	3300005840	Miscanthus Rhizosphere	NATNDSNAPFREAQSLYAATPGAKRLYAVKASGHHFEGGEKEFYQDLDQGLTQIADKSDNKVKEI*
Ga0068863_1005248992	3300005841	Switchgrass Rhizosphere	EKVFDIHPYLKSLKQTPIVFLNATSDTFAPFHEAQSLYDAIPGAKRFYAVKASGHHFEGGEKEFYEDLDRGISLQQIADKSDNKLKEQGVARD*
Ga0068863_1012495472	3300005841	Switchgrass Rhizosphere	RPFLKKLDQTPIVFLNAINDTNAPFREAQSLYEVTQGAKRLYAVKASGHHFEGGEKEFYQDLNLSLPQIADKDDNKLKETGARGS*
Ga0068860_1016423491	3300005843	Switchgrass Rhizosphere	YFTHGTPHEKVFDIHPYLKSLKQTPIVFLNATSDKFAPFHDAQSLYDVIPGAKHFYAVRASGHHFEGGEKEFYEDLDLGISLQQIADKSDNKLKEREVARD*
Ga0075286_10674371	3300005886	Rice Paddy Soil	MRFVYERVNLNYFDAHQYLKKLNKTPIVFLNATNDENAPFREAQSLYEAAPGSKHLYAVKARGHHFEGGEKEFYQDLDQGLTQMADKSDNKLKEI*
Ga0075432_103777001	3300006058	Populus Rhizosphere	QTPIIFLNATSDKNAPFREAQSLYDVIPGAKHFYAVKASGHHFEGGEKEFYEDLDLGLSLPQIADKSDNKLKETEVGRD*
Ga0082029_17153072	3300006169	Termite Nest	FLNATDDDNAPFSEAQSLYAATTGAKRLYAVKARGHHFEGGEKEFYRDLDQALLGHSVFTEQIADKTDNKLKDRSIAAR*
Ga0097621_1000845961	3300006237	Miscanthus Rhizosphere	FTHGTPHEKVFDIHPYLKSLKQTPIVFLNATSDTFAPFHEAQSLYDAIPGAKRFYAVKASGHHFEGGEKEFYEDLDRGISLQQIADKSDNKLKEQGVARD*
Ga0079221_109212531	3300006804	Agricultural Soil	TNDDTAPLREAQSLYEAVPGAKHLYTVKATGHHFEGGEQEFYQDLDHELSLQQMADKDDNKLKEAAAASR*
Ga0075433_102384081	3300006852	Populus Rhizosphere	FDVRQYLKQLNRTPVVFVNATKDDTAPFSEAQSLYATATGAKHLYAVKASGHHFEGAEKEFYEALDQGLSLPQIADKSDNKLKEDNAPAG*
Ga0075433_104053041	3300006852	Populus Rhizosphere	IVFVNATSDKFAPFSEAESLYDVIPGAKHFYAVKASGHHFEGGEKEFYEDLDHGISLQQIADKSDNKLKEPEVARD*
Ga0075433_110167192	3300006852	Populus Rhizosphere	FTHGTPHEKVFDIHPFLKSLKQTPIVFLNATSDSFAPLREAQSLYDVIPGAKHFYAVKASGHHFEGGEKEFYEDLDLGLSLPQIADKSDNKLKESEFARD*
Ga0075434_1004395052	3300006871	Populus Rhizosphere	QYLKKLNHPPIVFLNATDDDTAPLREARSLFDATAGAKRFYAVTANGHHFEGGEKEFYQDLDAGLSLPEIAGNGSSSRNWIS*
Ga0075424_1020000091	3300006904	Populus Rhizosphere	APFHEGQALYQATPGAKRFYAVKASGHHFEGGEKEFYQDLDQGLSLPQIADKDDKKLKETGPPAS*
Ga0079219_118804372	3300006954	Agricultural Soil	PIVFLNAINDTYAPFHEGQALYQATPGAKRFYAVRASGHHFEGGEKEFYEDLDRGLSLPQIADKDDNKLKETGPPAS*
Ga0105245_112221541	3300009098	Miscanthus Rhizosphere	TPHEKVFDAHQYLKKLKQTPIVFLNATNDKNAPLHEAQSLYEATPATKRLFAVKASGHHFEGGEKEFYQDLDQGLTQIADKTDNKVKEI*
Ga0105247_102654942	3300009101	Switchgrass Rhizosphere	PFRDAQSLYDVIPGAKHFYAVKASGHHFEGGEKEFYEDLDLGISLQQIADKSDNKLKEPEVARD*
Ga0111538_126878221	3300009156	Populus Rhizosphere	THGTPHEKVFDVHQYLKKLKQTPIVFLNATSDKNAPFHEAQSLYEATPAAKRLFAVKASGHHFEGGEKEFYQDLDQGLTQIVDKTDNKVKEI*
Ga0105241_107683562	3300009174	Corn Rhizosphere	FREAQSLYDATLGAKSFYAVKATGHHFEGGEKEFYDDLDHGISLQQIADKSDNKLKEREVARD*
Ga0105242_118055102	3300009176	Miscanthus Rhizosphere	NATNDKNAPFHEAQSLYEATPAAKRLFAVKASGHHFEGGEKEFYEDLDQGLTQISDKTDNKVKEI*
Ga0105248_101501811	3300009177	Switchgrass Rhizosphere	LKKLKQTPIVFLNATSDKNAPFHEAQSLYEATPAAKRLFAVKASGHHFEGGEKEFYQDLDQGLTQIVDKTDNKVKEI*
Ga0105248_116346051	3300009177	Switchgrass Rhizosphere	LFDAHQYLKKLKQTPIVFLNATNDDTAPLREAQSLYEAVPSMKHLYAVKATGHHFEGGEQEFYHDLDLGLSQQQIADKDDNKLKEPGAASR*
Ga0105237_112059322	3300009545	Corn Rhizosphere	FLNATNDDNAPFREAQSLYEAAPGSKHLYAVKARGHHFEGGEKEFYQDLDQGLTQMADKSDNKLKEI*
Ga0105249_121482891	3300009553	Switchgrass Rhizosphere	NATDDDNAPFGDAQSLYAATTGSKHLYAVKAHGHHFEGGEKEFYRDLDQGLLDQGIFTQQIADKTDNKLKDRSIAAR*
Ga0126384_113546211	3300010046	Tropical Forest Soil	KVFDARQYLKKLNQIPIVFLNATDDDTSPFREAQSLYDEASGAKHLYAVKASGHHFEGGEKEFYQDLDLGLSLQQIADKGDNKLKENRSDTELGLRTL*
Ga0126382_111678171	3300010047	Tropical Forest Soil	PIVFLNAINDTYAPFHEGQALYQATPGAKRFYAVKASGHHFEGGEKEFYQDLDLGLSLPQIADKDDNKLKETGPPAS*
Ga0105239_126729701	3300010375	Corn Rhizosphere	VFLNATNDENAPFREAQSLYESTPGTKHLYAVKARGHHFEGGEKEFYQDLDQGLTQIADKSDNKLKEI*
Ga0105239_129919582	3300010375	Corn Rhizosphere	ARQYLKQLQTPIVFLNATSDSYAPFREAQSLYATALGTKHLYAVKASGHHFEGGEKEFYQDLDQGLTQIADKSDNKVKERSVAAS*
Ga0134127_113896801	3300010399	Terrestrial Soil	YFTHGTPHEKVFDIHPYLKSLKQTPIVFLNATSDTFAPFHEAQSLYDAIPGAKRFYAVKASGHHFEGGEKEFYEDLDRGISLQQIADKSDNKLKEQGVARD*
Ga0134127_117067771	3300010399	Terrestrial Soil	APFHEGQALYQATPGAKRFYAVKASGHHFEGGEKEFYEDLDLGLSLPQIADKDDNKLKETGPPAS*
Ga0134122_103030591	3300010400	Terrestrial Soil	YLKKLNETPIVFLNAINDTNAPFREAQALFEATPGAKRLYAVKASGHHFEGGEKEFYQDLDLSLPQIADKDDNKLKEPRAATS*
Ga0134122_107484741	3300010400	Terrestrial Soil	PIVFLNATSDKYAPFREAQSLYDAIPGAKHFYAVNASGHHFEGGEKEFYEDLDLGISQQQIADKSDNKLKEAEVARD*
Ga0105246_119082941	3300011119	Miscanthus Rhizosphere	DFLKRLKQTPIIFVNATSDKNAPLREAQTLYEAAAGAKLFYAVKASGHHFEGGEQEFYQDLDRGLSLPQIADKSDKNLKEQKVATD*
Ga0157299_100868502	3300012899	Soil	ARQYLKKLNETPIVFLNATDDDTAPFREAQSLYEATPGAKRLYAVKASGHHFEGGEREFYQDLDLGLSTPQIADKTDKKLQEREVAAR*
Ga0157299_103055641	3300012899	Soil	KVFDVHQYLKKLKQTPIVFLNATSDKNAPFHEAQSLYEATPAAKRLFAVKASGHHFEGGEKEFYQDLDQGLTQIVDKTDNKVKEI*
Ga0164306_108660261	3300012988	Soil	TAPFREAQSLYEATPATKHLYPVKASGHHFEGGEKEFYQDLDQGLKQIADKSDNKLKET*
Ga0157373_109278981	3300013100	Corn Rhizosphere	LKKLQTPIVFLNATSDTNAPFREAQSLYATAPGTKHLYAVKASGHHFEGGEKEFYQDLDQGLTQIADKSDNKVKERSVAAS*
Ga0157372_109986721	3300013307	Corn Rhizosphere	IVFLNATSDTNAPFREAQSLYATAPGTKHLYAVKASGHHFEGGEKEFYQDLDQGLTQIADKSDNKVKERSFAAS*
Ga0157372_129296902	3300013307	Corn Rhizosphere	IHPFLKSLKQTPIIFLNATSDKNAPFREAQSLYDVIPGAKHFYAVKASGHHFEGGEKEFYEDLDLGLSLPQIADKSDNKLKESEFARD*
Ga0157375_121404652	3300013308	Miscanthus Rhizosphere	QTPIVFLNATNDGDAPFHEAQSLYDATPGTKQLYAVKARGHHFEGGEKEFYQDLDQGLTQIADKTDKKLKEI*
Ga0163163_129239251	3300014325	Switchgrass Rhizosphere	ATNDENAPFREAQSLYESTPGTKHLYAVKARGHHFEGGEKEFYQDLDQGLTQIADKSDNKLKEI*
Ga0182000_102318412	3300014487	Soil	PFREAQSLYEATPSAKRLYAVKASGHHFEGGEKEFYQDLDQGLTQIADKGGNKVKEI*
Ga0157377_111027561	3300014745	Miscanthus Rhizosphere	IVFLNATNDENAPFREAQSLYESTPGTKHLYAVKARGHHFEGGEKEFYQDLDQGLTQIADKSDNKLKEI*
Ga0157377_115504902	3300014745	Miscanthus Rhizosphere	LYQATPGAKRFYAVKASGHHFEGGEKEFYEDLDLGLSLPQIADKDDNKLKETGPPAS*
Ga0157376_109938951	3300014969	Miscanthus Rhizosphere	VFLNATSDTFAPFHEAQSLYDAIPGAKRFYAVKASGHHFEGGEKEFYEDLDRGISLQQIADKSDNKLKEQGVARD*
Ga0132256_1025838482	3300015372	Arabidopsis Rhizosphere	TPIIFLAATSDKNAPFREAQSLYDATPGAKYFFAVKATGHHFEGGEKEFYEDLDHGISLPQIADKSDNKLKEREVARD*
Ga0132256_1032980741	3300015372	Arabidopsis Rhizosphere	LDQTPIVFLNATNDDNAPLREAKSLYETAPGSKHLFAVEARGHHFEGGEQEFYRDLDLGLSSPQIADKSDKKLKET*
Ga0132257_1028200711	3300015373	Arabidopsis Rhizosphere	KPHEKTFDVQPYLKQLTQTPIVFVTATRDDDAPFREAQSLFQAAPGVKHFYAVKANGHHFEGGEKEFYDDLDLGLSLPQIAEKGDKKLKEISSAAN*
Ga0207653_103451991	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	QEAQSLYEQAPGTKHFYVVNAKGHHFEGGEKEFYQDLDMGISLPQIAAKDDNKLKETGAKPS
Ga0207645_102805772	3300025907	Miscanthus Rhizosphere	HQYLRKLGQTPIVFLNATDDDNAPFGDAQSLYAATTGSKHLYAVKAHGHHFEGGEKEFYRDLDQGLLDQGIFTQQIADKTDNKLKDRSIAAR
Ga0207643_103920192	3300025908	Miscanthus Rhizosphere	KAFDIHPFLKSLKQTPIVFLNATSDKNAPFHEAQLLYEVIPGAKRFYAVKASGHHFEGGEKEFYEDLDLGLSQQQIADKSDNKLKESEGARD
Ga0207654_103730392	3300025911	Corn Rhizosphere	QTPIVFLNAINDTSAPFHEGQVLYQATPGAKRFYAVKASGHHFEGGEKEFYQDLDQGLSVPQIADKDDNKLKETGPPAS
Ga0207707_100415783	3300025912	Corn Rhizosphere	KKLNQIPIVFLNATDDDTSPFREAQSLYEQAPGAKHFYVVKAKGHHFEGGEKEFYQDLDLGISLPQIAAKDDNKLKETGATPS
Ga0207662_110010952	3300025918	Switchgrass Rhizosphere	IHPYLKSLKQTPIVFLNATSDSFAPLREAQSLYDVIPGAKHFYAVKATGHHFEGGEKEFYEDLDRGISLQQIADKSDNKLKEQGVARD
Ga0207644_104206452	3300025931	Switchgrass Rhizosphere	TPHEKVFDAHQYLKKLNHTPIVFLNATNDKNAPFHEAQSLYEATPAAKRLFAVKASGHHFEGGEKEFYQDLDQGLTQIADKTDNKVKEI
Ga0207669_110452592	3300025937	Miscanthus Rhizosphere	IYFTHGTPHEKVFDVHQYLKLLKQTPIVFLNAINDKSAPFHEAQSLYEATPAAKRLFAVKASGHHFEGGEKEFYQDLDQGLTQIADKTDNKVKEI
Ga0207704_116951551	3300025938	Miscanthus Rhizosphere	ATNDKNAPFHEAQSLYEATPATKRLFAVKASGHHFEGGEKEFYEDLDQGLTQIADKTDNKVKEI
Ga0207691_105471471	3300025940	Miscanthus Rhizosphere	HPYLQSLKQTPIIFLNAMSDKNTPLREAQSLYDATPGAKHFYAVKASGHHFEGGEKEFYEDLDHGISLQQIADKSDNKLKETEVARD
Ga0207661_114923701	3300025944	Corn Rhizosphere	QYLKKLKQTPIVFLNATSDRNAPFREAQSLYEATPSAKRLYAVKASGHHFEGGEKEFYQDLDQGLTQIADKSDNKVKEI
Ga0207667_116751792	3300025949	Corn Rhizosphere	HEKVFDVNQYLKKLQTPIVFLNATSDTNAPFREAQSLYATAPGTKHLYAVKASGHHFEGGEKEFYQDLDQGLTQIADKSDNKVKERSVAAS
Ga0207651_111197001	3300025960	Switchgrass Rhizosphere	FDIHPFLKLLKQTPIVFLNATSDSFAPLREAQSLYEVIPGAKHFYAVKASGHHFEGGEKEFYEDLDRGISLQQIADKSDNKLKEQGVARD
Ga0207640_102504011	3300025981	Corn Rhizosphere	FLNATNDENAPFREAQSLYESAPGTKHLYAVKARGHHFEGGEKEFYQDLDQGLTQMADKSDNKVKEI
Ga0207641_111937192	3300026088	Switchgrass Rhizosphere	LKKLNEVPIVFLNAINDTNAPFREAQSLYEVTQGAKRLYAVKASGHHFEGGEKEFYQDLNLSLPQIADKDDNKLKETGARGS
Ga0207641_115731192	3300026088	Switchgrass Rhizosphere	NAPFHEAQSLYEATPAAKRLFAVKASGHHFEGGEKEFYQDLDQGLTQIADKTDNKVKEI
Ga0207674_101903242	3300026116	Corn Rhizosphere	VFLNATNDGDAPFHEAQSLYDATPGTKQLYAVKARGHHFEGGEKEFYQDLDQGLTQIADKTDKKLKEI
Ga0207674_108093601	3300026116	Corn Rhizosphere	ATNDDNAPLREAKSLYETAPGSKHLFAVEARGHHFEGGEQEFYRDLDLGLSSPQIADKSDKKLKET
Ga0207675_1004133691	3300026118	Switchgrass Rhizosphere	QYLKKLKQTPMVFLNATNDKNAPFHEAQSLYEATPAAKRLFAVKASGHHFEGGEKEFYQDLDQGLTQIADKTDNKVKEI
Ga0209177_100867911	3300027775	Agricultural Soil	PFREAQSLYEEAPGAKHLYAVKAKGHHFEGGEKEFYQDLDLGISVPQIAAKDDNKVKETGAAPN
Ga0310813_114567401	3300031716	Soil	SDKNAPFREAQSLYDVIPGAKHFYAVKASGQHFEGGEKEFYEDLDLGLSLPQIADKDDNKLKETGPPAS
Ga0310884_107305701	3300031944	Soil	QTPIVFLNATDDDNAPFSEAQSLYAATTGSKHLYAVKAHGHHFEGGEKEFYRDLDQGLLDQGIFTQQIADKTDNKLKDRSIAAR
Ga0310890_113777851	3300032075	Soil	QTPIVFLNATDDDNAPFGDAQSLYAATTGSKHLYAVKAHGHHFEGGEKEFYRDLDQGLLDQGVFTQQIADKTDNKLKDRSIAAR
Ga0307471_1039491482	3300032180	Hardwood Forest Soil	RPGEKAFDVHQYLKKLNQTPIIFLNATDDDTSPFREAQSMYEATPGAKRFYAVKASGHHFEGGEKEFYQDLDQGLSLPQIADKTGNEMKETGVVSS
Ga0310812_100404451	3300032421	Soil	DDDTSPFREAQSLYAEAAGAKHFYAVKAKGHHFEGGEKEFYEDLDLGISLPQIAAKDDNKLKETGALTS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F071616

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences