Metagenome / Metatranscriptome Family F071474

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F071474
Family Type	Metagenome / Metatranscriptome
Number of Sequences	122
Average Sequence Length	69 residues
Representative Sequence	MTLKGAALLAFIGTILIMAFLTWTFAFHVLDVLRGAEPPVVLFASFVYAFGCFTLAVFFFVFHRAQS
Number of Associated Samples	106
Number of Associated Scaffolds	122

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	19.67 %
% of genes near scaffold ends (potentially truncated)	24.59 %
% of genes from short scaffolds (< 2000 bps)	75.41 %
Associated GOLD sequencing projects	95
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.50

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (64.754 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (9.016 % of family members)
Environment Ontology (ENVO)	Unclassified (27.049 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (49.180 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 64.21% β-sheet: 0.00% Coil/Unstructured: 35.79%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.50
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.50
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 122 Family Scaffolds
PF07238	PilZ	3.28
PF02371	Transposase_20	2.46
PF02417	Chromate_transp	2.46
PF08245	Mur_ligase_M	2.46
PF00873	ACR_tran	1.64
PF00578	AhpC-TSA	1.64
PF02875	Mur_ligase_C	1.64
PF01548	DEDD_Tnp_IS110	1.64
PF14437	MafB19-deam	0.82
PF01523	PmbA_TldD	0.82
PF02381	MraZ	0.82
PF07992	Pyr_redox_2	0.82
PF11127	DUF2892	0.82
PF03544	TonB_C	0.82
PF15780	ASH	0.82
PF08388	GIIM	0.82
PF07485	DUF1529	0.82
PF01740	STAS	0.82
PF08308	PEGA	0.82
PF08327	AHSA1	0.82
PF09335	SNARE_assoc	0.82
PF00115	COX1	0.82
PF00589	Phage_integrase	0.82
PF02518	HATPase_c	0.82
PF08240	ADH_N	0.82
PF04366	Ysc84	0.82
PF10592	AIPR	0.82
PF00882	Zn_dep_PLPC	0.82
PF01098	FTSW_RODA_SPOVE	0.82
PF12867	DinB_2	0.82
PF02739	5_3_exonuc_N	0.82
PF13411	MerR_1	0.82
PF10417	1-cysPrx_C	0.82
PF00106	adh_short	0.82
PF08238	Sel1	0.82
PF05532	CsbD	0.82
PF00149	Metallophos	0.82

COG ID	Name	Functional Category	% Frequency in 122 Family Scaffolds
COG3547	Transposase	Mobilome: prophages, transposons [X]	4.10
COG2059	Chromate transport protein ChrA	Inorganic ion transport and metabolism [P]	2.46
COG0258	5'-3' exonuclease Xni/ExoIX (flap endonuclease)	Replication, recombination and repair [L]	0.82
COG0312	Zn-dependent protease PmbA/TldA or its inactivated homolog	General function prediction only [R]	0.82
COG0398	Uncharacterized membrane protein YdjX, related to fungal oxalate transporter, TVP38/TMEM64 family	Function unknown [S]	0.82
COG0586	Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family	Cell wall/membrane/envelope biogenesis [M]	0.82
COG0772	Peptodoglycan polymerase FtsW/RodA/SpoVE	Cell cycle control, cell division, chromosome partitioning [D]	0.82
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	0.82
COG1238	Uncharacterized membrane protein YqaA, VTT domain	Function unknown [S]	0.82
COG2001	MraZ, DNA-binding transcriptional regulator and inhibitor of RsmH methyltransferase activity	Translation, ribosomal structure and biogenesis [J]	0.82
COG2930	Lipid-binding SYLF domain, Ysc84/FYVE family	Lipid transport and metabolism [I]	0.82
COG3237	Uncharacterized conserved protein YjbJ, UPF0337 family	Function unknown [S]	0.82

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	64.75 %
Unclassified	root	N/A	35.25 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	64.75 %
Unclassified	root	N/A	35.25 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	64.75 %
Unclassified	root	N/A	35.25 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	44.26 %
Unclassified	root	N/A	35.25 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.25 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	23.77 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	10.66 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.25 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	23.77 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	9.84 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.82 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.25 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	23.77 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	9.84 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	0.82 %
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.25 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	23.77 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	2.46 %
Candidatus Sulfotelmatobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter	1.64 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	0.82 %
Tolypothrichaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Tolypothrichaceae	0.82 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.25 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	23.77 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	1.64 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1.64 %
Tolypothrix	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Tolypothrichaceae → Tolypothrix	0.82 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	0.82 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.25 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	23.77 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	1.64 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1.64 %
Tolypothrix bouteillei	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Tolypothrichaceae → Tolypothrix → Tolypothrix bouteillei	0.82 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	0.82 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.25 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	23.77 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	1.64 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1.64 %
Tolypothrix bouteillei VB521301	strain	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Tolypothrichaceae → Tolypothrix → Tolypothrix bouteillei → Tolypothrix bouteillei VB521301	0.82 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	0.82 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	0.82 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000955\|JGI1027J12803_108678659	Not Available	1465	Open in IMG/M
3300002245\|JGIcombinedJ26739_100037754	All Organisms → cellular organisms → Bacteria → Acidobacteria	4328	Open in IMG/M
3300004092\|Ga0062389_100061536	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3081	Open in IMG/M
3300004092\|Ga0062389_100379200	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1523	Open in IMG/M
3300004479\|Ga0062595_102382928	Not Available	524	Open in IMG/M
3300004480\|Ga0062592_100757113	Not Available	854	Open in IMG/M
3300004633\|Ga0066395_10005310	All Organisms → cellular organisms → Bacteria	4508	Open in IMG/M
3300004635\|Ga0062388_100268911	All Organisms → cellular organisms → Bacteria	1400	Open in IMG/M
3300005093\|Ga0062594_101934624	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	627	Open in IMG/M
3300005293\|Ga0065715_10599353	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	708	Open in IMG/M
3300005329\|Ga0070683_101172227	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	738	Open in IMG/M
3300005332\|Ga0066388_100529586	Not Available	1811	Open in IMG/M
3300005332\|Ga0066388_101452105	All Organisms → cellular organisms → Bacteria	1196	Open in IMG/M
3300005332\|Ga0066388_104272467	Not Available	728	Open in IMG/M
3300005332\|Ga0066388_107575751	Not Available	544	Open in IMG/M
3300005338\|Ga0068868_101687365	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	597	Open in IMG/M
3300005339\|Ga0070660_100465650	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1049	Open in IMG/M
3300005343\|Ga0070687_100585980	Not Available	764	Open in IMG/M
3300005354\|Ga0070675_101321669	Not Available	664	Open in IMG/M
3300005434\|Ga0070709_11132954	Not Available	627	Open in IMG/M
3300005435\|Ga0070714_100949776	Not Available	836	Open in IMG/M
3300005439\|Ga0070711_101308231	Not Available	629	Open in IMG/M
3300005445\|Ga0070708_100392931	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1308	Open in IMG/M
3300005526\|Ga0073909_10606726	Not Available	541	Open in IMG/M
3300005544\|Ga0070686_101130953	Not Available	648	Open in IMG/M
3300005564\|Ga0070664_100159074	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1997	Open in IMG/M
3300005577\|Ga0068857_100675546	Not Available	980	Open in IMG/M
3300005578\|Ga0068854_100141865	All Organisms → cellular organisms → Bacteria → Acidobacteria	1844	Open in IMG/M
3300005591\|Ga0070761_10002300	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	11724	Open in IMG/M
3300005591\|Ga0070761_10175060	Not Available	1264	Open in IMG/M
3300005591\|Ga0070761_10267041	All Organisms → cellular organisms → Bacteria	1025	Open in IMG/M
3300005602\|Ga0070762_10033273	All Organisms → cellular organisms → Bacteria	2771	Open in IMG/M
3300005618\|Ga0068864_102495626	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	523	Open in IMG/M
3300005921\|Ga0070766_10158273	All Organisms → cellular organisms → Bacteria	1392	Open in IMG/M
3300006055\|Ga0097691_1035638	Not Available	1892	Open in IMG/M
3300006175\|Ga0070712_101601544	Not Available	570	Open in IMG/M
3300006176\|Ga0070765_100008291	All Organisms → cellular organisms → Bacteria	7090	Open in IMG/M
3300006237\|Ga0097621_102264389	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	520	Open in IMG/M
3300006954\|Ga0079219_12234573	Not Available	527	Open in IMG/M
3300009143\|Ga0099792_10878584	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	592	Open in IMG/M
3300009174\|Ga0105241_10378969	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1235	Open in IMG/M
3300009177\|Ga0105248_12840990	Not Available	552	Open in IMG/M
3300009545\|Ga0105237_10395861	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1386	Open in IMG/M
3300009630\|Ga0116114_1020439	All Organisms → cellular organisms → Bacteria → Acidobacteria	2002	Open in IMG/M
3300009839\|Ga0116223_10302030	Not Available	955	Open in IMG/M
3300010043\|Ga0126380_10898077	Not Available	736	Open in IMG/M
3300010046\|Ga0126384_11451800	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	641	Open in IMG/M
3300010048\|Ga0126373_10189434	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1985	Open in IMG/M
3300010339\|Ga0074046_10673392	Not Available	609	Open in IMG/M
3300010371\|Ga0134125_12096486	Not Available	615	Open in IMG/M
3300010373\|Ga0134128_10791873	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1051	Open in IMG/M
3300010375\|Ga0105239_10102893	All Organisms → cellular organisms → Bacteria → Acidobacteria	3161	Open in IMG/M
3300010379\|Ga0136449_100599643	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1878	Open in IMG/M
3300010379\|Ga0136449_100744816	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1632	Open in IMG/M
3300010401\|Ga0134121_10746128	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	934	Open in IMG/M
3300012198\|Ga0137364_10376316	All Organisms → cellular organisms → Bacteria	1061	Open in IMG/M
3300012927\|Ga0137416_10491316	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1056	Open in IMG/M
3300012971\|Ga0126369_10588109	Not Available	1182	Open in IMG/M
3300012971\|Ga0126369_11243706	Not Available	834	Open in IMG/M
3300012987\|Ga0164307_11067558	Not Available	661	Open in IMG/M
3300013296\|Ga0157374_10291795	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	1612	Open in IMG/M
3300013296\|Ga0157374_11848553	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	629	Open in IMG/M
3300014152\|Ga0181533_1109076	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1213	Open in IMG/M
3300014156\|Ga0181518_10284396	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	828	Open in IMG/M
3300014162\|Ga0181538_10066891	Not Available	2187	Open in IMG/M
3300014164\|Ga0181532_10031493	All Organisms → cellular organisms → Bacteria	3674	Open in IMG/M
3300014199\|Ga0181535_10481339	All Organisms → cellular organisms → Bacteria	720	Open in IMG/M
3300014325\|Ga0163163_11867192	Not Available	661	Open in IMG/M
3300014489\|Ga0182018_10004129	All Organisms → cellular organisms → Bacteria	12471	Open in IMG/M
3300015193\|Ga0167668_1006436	All Organisms → cellular organisms → Bacteria	2636	Open in IMG/M
3300015261\|Ga0182006_1252283	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	579	Open in IMG/M
3300015371\|Ga0132258_12601194	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1264	Open in IMG/M
3300015373\|Ga0132257_102858969	Not Available	629	Open in IMG/M
3300016750\|Ga0181505_10323705	Not Available	1205	Open in IMG/M
3300018020\|Ga0187861_10034149	All Organisms → cellular organisms → Bacteria	2826	Open in IMG/M
3300018022\|Ga0187864_10003704	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	12337	Open in IMG/M
3300021170\|Ga0210400_11048315	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Tolypothrichaceae → Tolypothrix → Tolypothrix bouteillei → Tolypothrix bouteillei VB521301	661	Open in IMG/M
3300021181\|Ga0210388_10007972	All Organisms → cellular organisms → Bacteria	8373	Open in IMG/M
3300021181\|Ga0210388_10105482	All Organisms → cellular organisms → Bacteria	2417	Open in IMG/M
3300021402\|Ga0210385_10000345	All Organisms → cellular organisms → Bacteria	37220	Open in IMG/M
3300021407\|Ga0210383_10067522	All Organisms → cellular organisms → Bacteria → Acidobacteria	2985	Open in IMG/M
3300021433\|Ga0210391_10061832	All Organisms → cellular organisms → Bacteria → Acidobacteria	2970	Open in IMG/M
3300021433\|Ga0210391_10271732	All Organisms → cellular organisms → Bacteria	1330	Open in IMG/M
3300021445\|Ga0182009_10009630	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	3300	Open in IMG/M
3300021478\|Ga0210402_10001069	All Organisms → cellular organisms → Bacteria → Acidobacteria	29003	Open in IMG/M
3300021560\|Ga0126371_10026166	All Organisms → cellular organisms → Bacteria	5428	Open in IMG/M
3300021560\|Ga0126371_13380664	Not Available	539	Open in IMG/M
3300022521\|Ga0224541_1008479	All Organisms → cellular organisms → Bacteria → Acidobacteria	1105	Open in IMG/M
3300025321\|Ga0207656_10323988	Not Available	766	Open in IMG/M
3300025444\|Ga0208189_1022180	All Organisms → cellular organisms → Bacteria → Acidobacteria	1351	Open in IMG/M
3300025619\|Ga0207926_1047420	All Organisms → cellular organisms → Bacteria	1201	Open in IMG/M
3300025898\|Ga0207692_10432732	Not Available	825	Open in IMG/M
3300025911\|Ga0207654_10783722	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	688	Open in IMG/M
3300025914\|Ga0207671_10415158	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1071	Open in IMG/M
3300025916\|Ga0207663_10635877	Not Available	841	Open in IMG/M
3300025945\|Ga0207679_12028191	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	523	Open in IMG/M
3300025949\|Ga0207667_10617174	Not Available	1092	Open in IMG/M
3300026142\|Ga0207698_10172139	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1908	Open in IMG/M
3300027583\|Ga0209527_1085412	Not Available	709	Open in IMG/M
3300027667\|Ga0209009_1044449	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1106	Open in IMG/M
3300027821\|Ga0209811_10318913	Not Available	600	Open in IMG/M
3300027853\|Ga0209274_10004258	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	6703	Open in IMG/M
3300027879\|Ga0209169_10001862	All Organisms → cellular organisms → Bacteria → Acidobacteria	12828	Open in IMG/M
3300027889\|Ga0209380_10357201	All Organisms → cellular organisms → Bacteria	858	Open in IMG/M
3300027889\|Ga0209380_10479690	All Organisms → cellular organisms → Bacteria	726	Open in IMG/M
3300027915\|Ga0209069_10807744	Not Available	561	Open in IMG/M
3300028047\|Ga0209526_10163314	Not Available	1556	Open in IMG/M
3300029910\|Ga0311369_10561842	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	959	Open in IMG/M
3300030058\|Ga0302179_10254630	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	774	Open in IMG/M
3300030991\|Ga0073994_10909872	Not Available	886	Open in IMG/M
3300031236\|Ga0302324_100663864	All Organisms → cellular organisms → Bacteria → Acidobacteria	1480	Open in IMG/M
3300031890\|Ga0306925_11558409	Not Available	644	Open in IMG/M
3300031947\|Ga0310909_10324892	All Organisms → cellular organisms → Bacteria	1291	Open in IMG/M
3300032008\|Ga0318562_10021960	All Organisms → cellular organisms → Bacteria	3325	Open in IMG/M
3300032160\|Ga0311301_10413474	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2057	Open in IMG/M
3300032160\|Ga0311301_10457326	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1919	Open in IMG/M
3300032205\|Ga0307472_102195844	Not Available	557	Open in IMG/M
3300032782\|Ga0335082_10000016	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	175799	Open in IMG/M
3300032782\|Ga0335082_11574762	Not Available	529	Open in IMG/M
3300033158\|Ga0335077_10048278	All Organisms → cellular organisms → Bacteria → Acidobacteria	5193	Open in IMG/M
3300033433\|Ga0326726_10002134	All Organisms → cellular organisms → Bacteria	18276	Open in IMG/M
3300033433\|Ga0326726_10140524	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2195	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	79.51%
Host-Associated	Host-Associated	20.49%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	68.03%
Plants	Host-Associated → Plants	20.49%
Aquatic	Environmental → Aquatic	11.48%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	63.11%
Freshwater	Environmental → Aquatic → Freshwater	10.66%
Rhizosphere	Host-Associated → Plants → Rhizosphere	10.66%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.20%
Peat	Environmental → Terrestrial → Peat	4.92%
Roots	Host-Associated → Plants → Roots	1.64%
Sediment	Environmental → Aquatic → Sediment	0.82%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	35.25%
Loam	Environmental → Terrestrial → Soil → Loam	23.77%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	10.66%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.38%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.74%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	4.92%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.10%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.28%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.46%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.64%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.82%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.85%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	15.57%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	10.66%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	9.02%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.20%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.38%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.74%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	4.92%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.28%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.28%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.28%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.46%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.64%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.64%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.64%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.82%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.82%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.82%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.02%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	8.20%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.74%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.92%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	4.10%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	4.10%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.10%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	4.10%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	4.10%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.28%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	2.46%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.46%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.46%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.46%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.46%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.46%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	2.46%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.46%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.64%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.64%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	1.64%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.64%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.64%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.64%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.64%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.82%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.82%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.82%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.82%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.82%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.82%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.82%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.82%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.82%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.82%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.82%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.82%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.82%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006055	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 deep-072012	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009630	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_40	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300014152	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_60_metaG	Environmental	Open in IMG/M
3300014156	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_60_metaG	Environmental	Open in IMG/M
3300014162	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaG	Environmental	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300014199	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaG	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300015193	Arctic soil microbial communities from a glacier forefield, Rabots glacier, Tarfala, Sweden (Sample Rb6, proglacial stream)	Environmental	Open in IMG/M
3300015261	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016750	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300018020	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_100	Environmental	Open in IMG/M
3300018022	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_40	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022521	Peat soil microbial communities from Stordalen Mire, Sweden - 717 E3 20-24	Environmental	Open in IMG/M
3300025321	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025444	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_40 (SPAdes)	Environmental	Open in IMG/M
3300025619	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027583	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027667	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300029910	III_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030058	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_1	Environmental	Open in IMG/M
3300030991	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J12803_1086786593	3300000955	Soil	MTLKGAALLAFIGTVLITAFLTWTFVLKVLNVLQGVEPPVVLFSSFIYAFGCFTLALFLFVFHRAQT*
JGIcombinedJ26739_1000377543	3300002245	Forest Soil	MTLRGAALLAFIGTLLITAFLTWTLVLNVLNVLRGVEAPVVLFSSLIYAFGSFTLAVFFYTFHRAQS*
Ga0062389_1000615363	3300004092	Bog Forest Soil	MTIKSAAFLALIGTVLITALLMWAFVFHVVNVVRSVEAPVVLFASFVYAFGSLTLAIFFFVFHRAQL*
Ga0062389_1003792001	3300004092	Bog Forest Soil	MTLKGAAFLAFIGTVLVTACMVWTFVFNVLNVLRGVLPPVMLISSFVYAFACFTLVVFFYVFH
Ga0062595_1023829281	3300004479	Soil	MTLKSAALLAFIGMVVITAYLTWTFVVKVLHVLQGTEPPVVLFSSLIYAFGCFTLALFLFKFHKAER*
Ga0062592_1007571131	3300004480	Soil	RLSVHTPTMTLKGAALLAFIGTILMMAFLTWTFAFHVLDVLRGAEPPVVLFASFVYAFGCFTLAVFFFVFHRAQR*
Ga0066395_100053106	3300004633	Tropical Forest Soil	MTLKGAALLAFVGTVLITAFLTWTFVLKVFNVLQGTKPPVVLFSSFIYAFGCFTLSLFLFMFHKAQT*
Ga0062388_1002689111	3300004635	Bog Forest Soil	MTLKGAAFLAFIGTVLVTACVVWTFVFNVLNVLRGALPPVVLVSSFIYAFACLTLAVFFYVFHRAQS*
Ga0062594_1019346242	3300005093	Soil	LRAQRLSVHTPTMTLKGAALLAFIGTILMMAFLTWTFAFHVLDVLRGAEPPVVLFASFVYAFGCFTLAVFFFVFHRAQR*
Ga0065715_105993532	3300005293	Miscanthus Rhizosphere	MTLKGAALLAFIGTILMMAFLTWTFAFHVLDVLRGAEPPVVLFASFVYAFGCFTLAVFFFLFHRAQR*
Ga0070683_1011722272	3300005329	Corn Rhizosphere	LRAQRLSVHTPTMTLKGAALLAFIGTILMMAFLTWNFAFHVLDVLRGAEPPVVLFASFVYAFGCFTLAVFFFVFHRAQR*
Ga0066388_1005295861	3300005332	Tropical Forest Soil	MTLKGAALLAFIGTVLITAFLTWTFVLKVLNVLQGAEPAVVLFSSFIYAFGCFTLALFLFTFHKAQM*
Ga0066388_1014521052	3300005332	Tropical Forest Soil	MTLKGATLLAFIGTILITAFLTWTVVLHVINVLRSAEPPVVLFASFVYAFGCSTLAVFFFMFHRGQ*
Ga0066388_1042724672	3300005332	Tropical Forest Soil	MTLKGAALLAFVGTVLITAFLTWTFVLKVFNVLQGTKPPVVLFSSFIYAFGCFTLS
Ga0066388_1075757511	3300005332	Tropical Forest Soil	MTLKGAALLAFIGTIMITAFLTWTFVLHVINVLRDAEPPVVLFASFVYAFGCFTLAVFFFKVNRV*
Ga0068868_1016873651	3300005338	Miscanthus Rhizosphere	MTLKGAALLAFIGTILMMAFLTWTFAFHVLDVLRGAEPPVVLFASFVYAFGCFTLVVFFFVFHRAQR*
Ga0070660_1004656501	3300005339	Corn Rhizosphere	MTLKGAALLAFIGTILMMAFLTWTFAFHVLDVLRGAEPPVVLFASFVYAFGCFTLAVFFFVFHRAQR*
Ga0070687_1005859801	3300005343	Switchgrass Rhizosphere	LLAFIGTILMMAFLTWNFAFHVLDVLRGAEPPVVLFASFVYAFGCFTLVVFFFVFHRAQR
Ga0070675_1013216691	3300005354	Miscanthus Rhizosphere	LSVHTPTMTLKGAALLAFIGTILMMAFLTWTFAFHVLDVLRGAEAPVVLFASFVYAFGCFTLAVFFFVFHRAQR*
Ga0070709_111329541	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MTLKGAALLAFIGTVLITAFLTWTFVLKVLNVLQGAEPPVVLFSSFIYAFGCFTLALFLFVFHRAQT*
Ga0070714_1009497761	3300005435	Agricultural Soil	LRTRLASVHTPSMTLKGAALLAFIGTVLITAFLTWTFVLKVLNVLQGAEPPVVLFSSFIYAFGCFTLALFLFVFHRAQT*
Ga0070711_1013082311	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	SVHTPSMTLKGAALLAFIGTVLITAFLTWTFVLKVLNVLQGAEPPVVLFSSFIYAFGCFTLALFLFVFHRAQT*
Ga0070708_1003929311	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MTLKGAALLAFIGTVLITAFLIWTFVFRVLNVLRGVDAPVVLFSSFIYAFGCFTLAVFFFVFHRAQS*
Ga0073909_106067261	3300005526	Surface Soil	LASVHTPSMTLKGAALLAFIGTVLITAFLTWTFVLKVLNVLQGAEPPVVLFSSFIYAFGCFTLALFLFVFHRAQT*
Ga0070686_1011309531	3300005544	Switchgrass Rhizosphere	HWLRAQRLSVHTPTMTLKGAALLAFIGTILMMAFLTWTFAFHVLDVLRGAEPPVVLFASFVYAFGCFTLAVFFFVFHRAQS*
Ga0070664_1001590743	3300005564	Corn Rhizosphere	LRAQRLSVHTPTMTLKGAALLAFIGTILMMAFLTWTFAFHVLDVLRGGEPPVVLFASFVYAFGCFTLAVFFFVFHRAQR*
Ga0068857_1006755462	3300005577	Corn Rhizosphere	LLAFIGTILMMAFLTWTFAFHVLDVLRGAEAPVVLFASFVYAFGCFTLAVFFFVFHRAQR
Ga0068854_1001418652	3300005578	Corn Rhizosphere	MTLKGAALLAFIGTILMMAFLTWTFAFHVLDVLRGAEPPVVLFASFVYAFGCFTLAVFFFVFHRGQR*
Ga0070761_100023007	3300005591	Soil	MTLKGAAFLALVGTVLITAFLVWTFVFNVLNVVRGAQAPVVLFSSFVYAFACLSVAVFFFVFHRSQP*
Ga0070761_101750601	3300005591	Soil	MTLKGAALLAFIGTLLITVFLTLTFIFNFVNVLRDVAAPVVLISSFIYAFGCLTLAIFFFVFHRAQS*
Ga0070761_102670411	3300005591	Soil	MTTKGAAFLAFIGTLLITAFLTWTFIFHFLNVLRNVEAVVVLFPSFIYAFGAFTLTVFFFIFHRAQP*
Ga0070762_100332733	3300005602	Soil	MGADVHTPNMTLKGAAFLAFIGTVLVTVCMVWTFVFNVLNVLRGVLAPVVLISSFTYAFACLTLAVFFYVFHRRSRE*
Ga0068864_1024956262	3300005618	Switchgrass Rhizosphere	LLAFIGTILMMAFLTWTFAFHVLDVLRGAEPPVVLFASFVYAFGCFTLAVFFFVFHRAQR
Ga0070766_101582732	3300005921	Soil	LRALRINLATIILPTMTLKAAALLAFIGTLLITALLTWTFVFHFLNVLRDVEPAIVLFSSFIYAFGAFTLALFCYVFHRAQR*
Ga0097691_10356383	3300006055	Arctic Peat Soil	MTLKGAALLAFLGTVLITALLVWTFVFHVLNVLRGVDPPVVLFSSFIYAFGCFTLAVFFFVFHRTQS*
Ga0070712_1016015441	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MTLKGAALLAFIGTALITAVLTWIFVLKVLHVLQGAEPPVVLISSFIYAFGCFTLALFLFMFHRTQP*
Ga0070765_1000082913	3300006176	Soil	MGADVHTPNMTLKGAAFLAFIGTVLVTVCMVWTFVFNVLNVLRGVLAPVVLISSFTYAFACLTLAVFFYVFHRTQS*
Ga0097621_1022643892	3300006237	Miscanthus Rhizosphere	LRAQRLSVHTPTMTLKGAALLAFIGTILMMAFLTWTFAFHVLDVLRGAEAPVVLFASFVYAFGCFTLAVFFFVFHRAQR*
Ga0079219_122345732	3300006954	Agricultural Soil	MTLKGAALLAFIGTALITAVLTWIFVLKVLHVLQGAEPPVVLISSFIYAFGCFTLALFLFMFHRT
Ga0099792_108785842	3300009143	Vadose Zone Soil	MTLKGSALLAFIGTVLITAFLTWMFISNVVNVLRGVDAPVVLFASFIYAFGCFCVAVFFFVFHRAQS*
Ga0105241_103789692	3300009174	Corn Rhizosphere	MTLKGAALLAFIGTILMMAFLTWTFAFHVLDVLRSAEPPVVLFASFVYVFGCFTLAVFFFVFHRAQR*
Ga0105248_128409901	3300009177	Switchgrass Rhizosphere	MTLKGAALLAFIGTILMMAFLTWTFAFHVLDALRGAEPPVVLFASFVYAFGCFTLAV
Ga0105237_103958612	3300009545	Corn Rhizosphere	MTLKGAALLAFIGTILMMAFLTWTFAFHVLDVLRGAEAPVVLFASFVYAFGCFTLAVFFFVFHRAQR*
Ga0116114_10204392	3300009630	Peatland	MTLKGAALLAFIGTVLITAFLTWTFVFNVLNVLRGLAPPVVLFSSFIYAFACFALAVFFFVFHRAQP*
Ga0116223_103020302	3300009839	Peatlands Soil	TMTLKGAALLAFIGTVLITAFLVWTFIFNVLNVLRGVAPPAVLFSSFIYAFGCFTVGVFFLVFHRAQS*
Ga0126380_108980771	3300010043	Tropical Forest Soil	MTLKGAALLAFIGTVLITAFLTWTFVLKVLNVLQGAEPLVVLLSSFIYAFGCFTLALFLFMFHKAQT*
Ga0126384_114518001	3300010046	Tropical Forest Soil	MILNGAALLAFIGTVLITAFLTWTFVLKVLNVLQGTEPPVVLFASFINAFGCFTVALFLFVFHKAQT*
Ga0126373_101894342	3300010048	Tropical Forest Soil	MTLKGAALLAFIGTILITALLTWTFVSHLLNVLRGAEPPVVLFASFVYPFGCFTLAVFFFMFHRAQ*
Ga0074046_106733922	3300010339	Bog Forest Soil	MTLKGAALLAFIGTVLITASLVWTFIFNLLNVLRGVTAPVVLFLSFIYAFGCFTVGVFFLVFHRAQP*
Ga0134125_120964861	3300010371	Terrestrial Soil	MTLKGAALLAFIGTILIMAFLTWTFAFHVLDVLRGAEPPVVLFASFVYAFGCFTLAVFFFVFHRAQS*
Ga0134128_107918731	3300010373	Terrestrial Soil	MTLKGAALLAFIGTILMMAYLTWTFAFHVLDVLRGAEPPVVLFASFVYAFGCFTLAVFFFVFHRAQR*
Ga0105239_101028932	3300010375	Corn Rhizosphere	MTLKGAALLAFIGTILMMAFLTWNFAFHVLDVLRGAEPPVVLFASFVYAFGCFTLVVFFFVFHRAQR*
Ga0136449_1005996432	3300010379	Peatlands Soil	MTLKGAALLAFIGTVLITAFLVWTFIFNVLNVLRGVAPPAVLFSSFIYAFGCFTVGVFFLVFHRAQS*
Ga0136449_1007448163	3300010379	Peatlands Soil	MTLKGAALLAFIGTVLITAFLVWTFVFNVLNVLRGVASPVVLFSSFLYAFGCFTVGVFFLVFHRAQS*
Ga0134121_107461282	3300010401	Terrestrial Soil	MTLKGAALLAFIGTILMMAFLTWNFAFHVLDVLRGAEPPVVLFASFVYAFGCFTLAVFFFVFHRAQR*
Ga0137364_103763162	3300012198	Vadose Zone Soil	MTLKGAALLAFIGTVLITAFLTWRFVFNVVNVLQGAEPPAVLFSSFIYAFGCFTLALFLFMFHRAQT*
Ga0137416_104913162	3300012927	Vadose Zone Soil	ADVHNPTMTLKGSALLAFVGTVLMTAFLTWMFISNVVNVLRGVDAPVVLFASFIYAFGCFCVAVFFFVFHRAQS*
Ga0126369_105881091	3300012971	Tropical Forest Soil	MTLKRAALLAFVGTALIAAYLTWTFIHQVLNVLQGAEPPVVLFSSFIYAFGCFTLALFLFMFHKAQT*
Ga0126369_112437062	3300012971	Tropical Forest Soil	AFPAASVHTPTMTLKGAALLAFIGTILITAFLTWTFVLHVINVLRDAEPPVVLFASFVYAFGCFTLSLFFFMFHRGQ*
Ga0164307_110675582	3300012987	Soil	MTLKGAALLAFIGTVLITAFLTWTFVLKVLNVLQGAEPPVVLFSSFIYAFGCFTLALFLFMFHRAQT*
Ga0157374_102917951	3300013296	Miscanthus Rhizosphere	PEEGQHWLRAQRLSVHTPTMTLKGAALLAFIGTILMMAFLTWTFAFHVLDVLRGAEPPVVLFASFVYAFGCFTLAVFFFVFHRAQS*
Ga0157374_118485531	3300013296	Miscanthus Rhizosphere	MTLKGAALLAFICTILMMSFLTWTFAFHVLDVLRSAEPPVVLFASFVYVFGCFTLAVFFFVFH
Ga0181533_11090762	3300014152	Bog	MTPANVHTPTMTLKGAALLALIGTVLITAFLPWTFIFNVLNVLRGLAPPVVLFSSFIYAFACFALAVFFFVFHRAQP*
Ga0181518_102843961	3300014156	Bog	NVHTPTMTLKGAALLAFIGTVLITAFLTWTFVFNVLNVLRGLAPPVVLFSSFIYAFACFALAVFFFVFHRAQP*
Ga0181538_100668911	3300014162	Bog	VVEAEMGRSRELRMTLANVHTPTMTLKNAALLALIGTILMTALLVWNFVSNVLNVLRGVEAPIVLFASFIYAFGC
Ga0181532_100314934	3300014164	Bog	MTLKGAALLAFIGTVLITAFLVVTFIFNVLNVLRGVAPPVVLISSFIYAFGCFTVGVFFFVFHRAQS*
Ga0181535_104813392	3300014199	Bog	FLTWMFILHFFTVSRGAEALVVLLSSFIYAFASLTLTVFFFVFHRSQS*
Ga0163163_118671921	3300014325	Switchgrass Rhizosphere	MTLKGAALLAFIGTILMMAFLTWTFAFHVLDVLRGAEPPVVLFASFVYAFGCFTL
Ga0182018_100041294	3300014489	Palsa	MTTKGAAFLAFIGTLLITAFLTWTFVFHLLNVLRNVEAVVVLFSSFIYAFGSFTLTVFFFVFHRSQA*
Ga0167668_10064364	3300015193	Glacier Forefield Soil	MTLRGAALLAFIGTLLITAFLTWTMVLNVLNVLRGVEAPVVLFSSLIYAFGSFTLAIFFYTFRRAQS*
Ga0182006_12522832	3300015261	Rhizosphere	MAVEMDDELRGNAGSVHTPTMTLKGAALLAFIGTILMMAFLTWTFAFHVLDVLRGAEPPVVLFASFVYAFGCFTLAVFFFVFHRAQR*
Ga0132258_126011942	3300015371	Arabidopsis Rhizosphere	MTLKGAALLAFIGTVLITAFLTWTFVLKVLNVLQGAEPPVVLFSSFIYAFGCFTMALFLFMFHRAQT*
Ga0132257_1028589691	3300015373	Arabidopsis Rhizosphere	MTLKGAALLAFIGTILMMAFLTWTFAFHVLDVLRGAEPPVVLFASLVYAFGCFTLAVFFFVFHRAQR*
Ga0181505_103237052	3300016750	Peatland	MTLKGAALLAFIGTVLITAFLVVTFIFNVLNVLRGVAPPVVLISSFIYAFGCFTVGVFFFVFHRAQS
Ga0187861_100341492	3300018020	Peatland	MTLKGAALLAFIGTVLITAFLTWTFVFNVLNVLRGVAPPVVLFSSFIYAFACFALAVFFFVFHRAQP
Ga0187864_1000370410	3300018022	Peatland	MTLKGAALLAFIGTVLITAFLTWTFVFNVLNVLRGLAPPVVLFSSFIYAFACFALAVFFFVFHRAQP
Ga0210400_110483152	3300021170	Soil	LRIGPLNVHTPAMTTKGAAFLAFIGTLLITAFLTWTFIFHFLNVLRNVEAVVVLFPSFIYAFGAFTLTVFFFIFHRAQS
Ga0210388_100079723	3300021181	Soil	MGADVHTPNMTLKGAAFLAFIGTVLVTVCMVWTFIFNALNVLRGVLAPVVLISSFTYAFACLTLAVFFYVFHRAQS
Ga0210388_101054821	3300021181	Soil	MTLKGAALLAFIGTLLITVFLTLTFIFNFVNVLRDVAAPVVLISSFIYAFGCLTLAIFFFVFHRAQS
Ga0210385_1000034514	3300021402	Soil	MTTKGAAFLAFIGTLLITAFLTWTFIFHFLNVLRNVEAVVVLFPSFIYAFGAFTLTVFFFIFHRAQS
Ga0210383_100675225	3300021407	Soil	MGADVHTPNMTLKGAAFLAFIGTVLVTVCMVWTFVFNVLNVLRGVLAPVVLISSFTYAFACLTLAVFFYVFHRAQS
Ga0210391_100618323	3300021433	Soil	MTTKGAAFLAFIGTLLITAFLTWTFIFHFLNVLRNVEAVVVLFPSFIYAFGAFTLTVFFFIFHRAQP
Ga0210391_102717323	3300021433	Soil	MGADVHTPNMTLKGAAFLAFIGTVLVTVCMVWTFVFNVLNVLRGVLAPVVLISSFTYAFACLTLAVFFYVFHRTQS
Ga0182009_100096304	3300021445	Soil	MTLKSAALLAFIGMVVITAYLTWTFVVKVLHVLQGTEPPVVLFSSLIYAFGCFTLALFLFKFHKAER
Ga0210402_1000106914	3300021478	Soil	MSLKGAALLAFIGTGLITAFLMWTLVSNVVNVLRGAEPPVVLFSSFIYAFGCFTLALFLFKFHREQT
Ga0126371_100261665	3300021560	Tropical Forest Soil	MTLKGAALLAFIGTILITALLTWTFVSHLLNVLRGAEPPVVLFASFVYPFGCFTLAVFFFMFHRAQ
Ga0126371_133806641	3300021560	Tropical Forest Soil	MTLKGAALLAFVGTVLITAFLTWTFVLKVFNVLQGTKPPVVLFSSFIYAFGCFTLSLFLFMFHKAQT
Ga0224541_10084791	3300022521	Soil	MTTKGAAFLAFIGTLLITAFLTWTFVFHLLNVLRNVEAVVVLFSSFIYAFGSFTLTVFFFVFHRSQA
Ga0207656_103239881	3300025321	Corn Rhizosphere	MTLKGAALLAFIGTILMMAFLTWNFAFHVLDVLRGAEPPVVLFASFVYAFGCFTLVVFFFVFHRAQR
Ga0208189_10221802	3300025444	Peatland	MTPANVHTPTMTLKGAALLAFIGTVLITAFLTWTFVFNVLNVLRGLAPPVVLFSSFIYAFACFALAVFFFVFHRAQP
Ga0207926_10474203	3300025619	Arctic Peat Soil	MTLKGAALLAFLGTVLITALLVWTFVFHVLNVLRGVDPPVVLFSSFIYAFGCFTLAVFFFVFHRTQS
Ga0207692_104327321	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	LLAFIGTVLITAFLTWTFVLKVLNVLQGAEPPVVLFSSFIYAFGCFTLALFLFVFHRAQT
Ga0207654_107837222	3300025911	Corn Rhizosphere	LRAQRLSVHTPTMTLKGAALLAFIGTILMMAFLTWNFAFHVLDVLRGAEPPVVLFASFVYAFGCFTLAVFFFVFHRAQR
Ga0207671_104151582	3300025914	Corn Rhizosphere	EEGQHWLRAQRLSVHTPTMTLKGAALLAFIGTILMMAFLTWNFAFHVLDVLRGAEPPVVLFASFVYAFGCFTLAVFFFVFHRAQR
Ga0207663_106358772	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	VTLKGAALLAFIGTVLITAFLTWTFVLKVLNVLQGAEPPVVLISSFIYAFGCFTLALFLFVFHRAQT
Ga0207679_120281911	3300025945	Corn Rhizosphere	LRAQRLSVHTPTMTLKGAALLAFIGTILMMAFLTWTFAFHVLDVLRGAEPPVVLFASLVYAFGCFTLAVFFFVFHRAQR
Ga0207667_106171741	3300025949	Corn Rhizosphere	LRAQRLSVHTPTMTLKGAALLAFIGTILMMAFLTWTFAFHVLDVLRGAEPPVVLFASFVYAFGCFTLAVFFFVFHRGQR
Ga0207698_101721392	3300026142	Corn Rhizosphere	MTLKGAALLAFIGTILMMAFLTWNFAFHVLDVLRGAEPPVVLFASLVYAFGCFTLAVFFFVFHRAQR
Ga0209527_10854122	3300027583	Forest Soil	LAFIGTLLITAFLTWTMVLNVLNVLRGVEAPVVLFSSLIYAFGSFTLAIFFYTFRRAQS
Ga0209009_10444493	3300027667	Forest Soil	MTLKNAALLALIGTILMTALLLWTFVSNMINVLRGVDAPVVLFSSFIYAFGCFTLMVSFFVFHRAQR
Ga0209811_103189131	3300027821	Surface Soil	LASVHTPSMTLKGAALLAFIGTVLITAFLTWTFVLKVLNVLQGAEPPVVLFSSFIYAFGCFTLALFLFVFHRAQT
Ga0209274_100042586	3300027853	Soil	MTLKGAAFLALVGTVLITAFLVWTFVFNVLNVVRGAQAPVVLFSSFVYAFACLSVAVFFFVFHRSQP
Ga0209169_1000186210	3300027879	Soil	MGADVHTPNMTLKGAAFLAFIGTVLVTVCMVWTFVFNVLNVLRGVLAPVVLISSFTYAFACLTLAVFFYVFHRRSRE
Ga0209380_103572012	3300027889	Soil	LRALRINLATIILPTMTLKAAALLAFIGTLLITALLTWTFVFHFLNVLRDVEPAIVLFSSFIYAFGAFTLALFCYVFHRAQR
Ga0209380_104796901	3300027889	Soil	MTTKGAAFLAFIGTLLITAFLTWTFIFHFLNVLRNVEAVVVLFPSFIYAFGAFTLTVFFF
Ga0209069_108077441	3300027915	Watersheds	TLKGSALLAFIGTVLMTVFLTWTFVLKVLNVLQGAEPPVVLVSSFIYAFGCFTLALFLFMFHRAQT
Ga0209526_101633141	3300028047	Forest Soil	MTLRGAALLAFIGTLLITAFLTWTLVLNVLNVLRGVEAPVVLFSSLIYAFGSFTLAVFFYTFHRAQS
Ga0311369_105618423	3300029910	Palsa	MTLKGAAFLAFVATLLTTILLTWTFIVHFLNVLRGVEPMLVLFSSFLYAFASFAITLFFFLFHQSQR
Ga0302179_102546303	3300030058	Palsa	AFIGTLLITAFLTWTFVFHLLNVLRNVEAVVVLFSSFIYAFGSFTLTVFFFVFHRSQA
Ga0073994_109098722	3300030991	Soil	TATMTLRGAARLAFIGTLPITALLTWTLVLNVLHVLRGVEAPVVLFSTLIYAFGSFTLAVFFYTFHRAQS
Ga0302324_1006638642	3300031236	Palsa	MTTKGAAFLAFIGTLLITAFLTWTFVFHLLNVLRNVEAVVVLFPSFIYAFGSFTLTVFFFVFHRSQP
Ga0306925_115584092	3300031890	Soil	LVAYPTLSVHTPTMTLKGAAFLAFIGTILITVLLAWTFVSHVLNFLHGAEPPVVLFSSFVYAFGCFTLAVFFFIFHRSQS
Ga0310909_103248921	3300031947	Soil	MTLKGAAFLAFIGTILITVLLAWTFVSHVLNFLHGAEPPVVLFSSFVYAFGCFTLAVFFFIFHRSQS
Ga0318562_100219601	3300032008	Soil	AGLVAYPTLSVHTPTMTLKGAAFLAFIGTILITVLLAWTFVSHVLNFLHGAEPPVVLFSSFVYAFGCFTLAVFFFIFHRSQS
Ga0311301_104134745	3300032160	Peatlands Soil	MTLKGAALLALIGMVLITAFLIWTFVFHFLNVLRGVEPLLVLFSAFIYAFACFTLVVFFFVFHGSQR
Ga0311301_104573262	3300032160	Peatlands Soil	MTLANVHTPTMTLKGAALLAFIGTVLITAFLVWTFIFNVLNVLRGVAPPAVLFSSFIYAFGCFTVGVFFLVFHRAQS
Ga0307472_1021958442	3300032205	Hardwood Forest Soil	MTLKGAALLAFIGTVLITAFLTWTFVVNVLNVLRGAEPPVVLFSSFIYAFGCFTLALFLFMFHRAQT
Ga0335082_1000001692	3300032782	Soil	MTLKGAALLAFIGTVLITAFLTWTFILKVLNVLQGTEPPVVLFSSFIYAFGCFTLALFLFIFHKAQT
Ga0335082_115747621	3300032782	Soil	MTLKGAALLAFIGTVLITAFLTWTFVLNVLNVLRGAEPPVVLFSSFIYAFGCFTLALFLFMFHRAQT
Ga0335077_100482783	3300033158	Soil	MTLEGAALLAFIGTVLITAFLTWTFVLNVLNVLRGAEPPVVLFSSFIYAFGCFTLALFLFMFHRAQT
Ga0326726_100021349	3300033433	Peat Soil	MTLKGAALLAFIGTVLITAFLTWRFVFNVVNVLRGAEPPVVLFSSFIYAFGCFTLALFLFMFHRAQT
Ga0326726_101405243	3300033433	Peat Soil	MTLKGAALLAFIGTALITAFLTWTFVFKVLNVLRGAEPPVVLFSSFIYAFGCFTLALFLFMFHRAQT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F071474

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences