Metagenome / Metatranscriptome Family F071457

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F071457
Family Type	Metagenome / Metatranscriptome
Number of Sequences	122
Average Sequence Length	69 residues
Representative Sequence	MAVDHHENLRRLREILRKQRRELVATMVGAKKEPTKFAPLVELQEACDAVEWALEDEAAAAKEGER
Number of Associated Samples	77
Number of Associated Scaffolds	122

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	65.57 %
% of genes near scaffold ends (potentially truncated)	31.97 %
% of genes from short scaffolds (< 2000 bps)	90.16 %
Associated GOLD sequencing projects	70
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.64

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (57.377 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (22.951 % of family members)
Environment Ontology (ENVO)	Unclassified (41.803 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (76.230 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 61.70% β-sheet: 0.00% Coil/Unstructured: 38.30%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.64
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.64
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 122 Family Scaffolds
PF07369	DUF1488	26.23
PF02195	ParBc	8.20
PF00313	CSD	4.10
PF01165	Ribosomal_S21	3.28
PF08401	ArdcN	2.46
PF13767	DUF4168	1.64
PF00589	Phage_integrase	1.64
PF13701	DDE_Tnp_1_4	0.82
PF12696	TraG-D_C	0.82
PF06078	DUF937	0.82
PF01614	IclR	0.82
PF00271	Helicase_C	0.82
PF00140	Sigma70_r1_2	0.82
PF02974	Inh	0.82
PF00198	2-oxoacid_dh	0.82
PF04546	Sigma70_ner	0.82

COG ID	Name	Functional Category	% Frequency in 122 Family Scaffolds
COG0828	Ribosomal protein S21	Translation, ribosomal structure and biogenesis [J]	3.28
COG4227	Antirestriction protein ArdC	Replication, recombination and repair [L]	2.46
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	1.64
COG0508	Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component	Energy production and conversion [C]	0.82
COG1414	DNA-binding transcriptional regulator, IclR family	Transcription [K]	0.82
COG3753	Uncharacterized conserved protein YidB, DUF937 family	Function unknown [S]	0.82

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	57.38 %
Unclassified	root	N/A	42.62 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	57.38 %
Unclassified	root	N/A	42.62 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	57.38 %
Unclassified	root	N/A	42.62 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	55.74 %
Unclassified	root	N/A	42.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.62 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	29.51 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.62 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	14.75 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	3.28 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	1.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.62 %
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	3.28 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3.28 %
Methylocystaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae	2.46 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.64 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.62 %
Rhodospirillales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	3.28 %
Methylocystis	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis	2.46 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.64 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.82 %
unclassified Hyphomicrobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.62 %
Rhodospirillales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	3.28 %
unclassified Methylocystis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis → unclassified Methylocystis	2.46 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.64 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.82 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.62 %
Rhodospirillales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	3.28 %
Methylocystis sp. H4A	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis → unclassified Methylocystis → Methylocystis sp. H4A	2.46 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.64 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.82 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	0.82 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004633\|Ga0066395_10596657	Not Available	647	Open in IMG/M
3300005176\|Ga0066679_10598125	Not Available	719	Open in IMG/M
3300005332\|Ga0066388_102983308	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	865	Open in IMG/M
3300005332\|Ga0066388_103691499	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	781	Open in IMG/M
3300005332\|Ga0066388_104207848	Not Available	734	Open in IMG/M
3300005332\|Ga0066388_104931590	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	678	Open in IMG/M
3300005332\|Ga0066388_105686012	All Organisms → cellular organisms → Bacteria → Proteobacteria	631	Open in IMG/M
3300005332\|Ga0066388_106241097	Not Available	601	Open in IMG/M
3300005538\|Ga0070731_11103084	Not Available	524	Open in IMG/M
3300005542\|Ga0070732_10044993	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2543	Open in IMG/M
3300005542\|Ga0070732_10107820	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1643	Open in IMG/M
3300005764\|Ga0066903_100870216	All Organisms → cellular organisms → Bacteria → Proteobacteria	1625	Open in IMG/M
3300005764\|Ga0066903_100877850	All Organisms → cellular organisms → Bacteria	1619	Open in IMG/M
3300005764\|Ga0066903_101852195	All Organisms → cellular organisms → Bacteria → Proteobacteria	1154	Open in IMG/M
3300005764\|Ga0066903_102601776	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	981	Open in IMG/M
3300005764\|Ga0066903_102647806	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	972	Open in IMG/M
3300005764\|Ga0066903_104559408	All Organisms → cellular organisms → Bacteria → Proteobacteria	738	Open in IMG/M
3300005764\|Ga0066903_105623056	Not Available	660	Open in IMG/M
3300006059\|Ga0075017_101393779	Not Available	551	Open in IMG/M
3300006176\|Ga0070765_100024485	All Organisms → cellular organisms → Bacteria → Proteobacteria	4581	Open in IMG/M
3300009038\|Ga0099829_10052188	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3033	Open in IMG/M
3300009143\|Ga0099792_10043247	Not Available	2160	Open in IMG/M
3300009143\|Ga0099792_10473855	Not Available	779	Open in IMG/M
3300009792\|Ga0126374_10182881	Not Available	1308	Open in IMG/M
3300009792\|Ga0126374_10449071	Not Available	916	Open in IMG/M
3300009792\|Ga0126374_10959221	Not Available	667	Open in IMG/M
3300009826\|Ga0123355_12168380	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	509	Open in IMG/M
3300010047\|Ga0126382_12184998	Not Available	532	Open in IMG/M
3300010048\|Ga0126373_11644768	Not Available	707	Open in IMG/M
3300010048\|Ga0126373_11962164	All Organisms → cellular organisms → Bacteria → Proteobacteria	648	Open in IMG/M
3300010162\|Ga0131853_11044627	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	625	Open in IMG/M
3300010358\|Ga0126370_10833156	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	826	Open in IMG/M
3300010358\|Ga0126370_11129920	All Organisms → cellular organisms → Bacteria → Proteobacteria	724	Open in IMG/M
3300010358\|Ga0126370_11488365	All Organisms → cellular organisms → Bacteria → Proteobacteria	643	Open in IMG/M
3300010359\|Ga0126376_10295639	Not Available	1405	Open in IMG/M
3300010359\|Ga0126376_10694318	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	978	Open in IMG/M
3300010359\|Ga0126376_11113503	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	799	Open in IMG/M
3300010360\|Ga0126372_10250211	All Organisms → cellular organisms → Bacteria	1520	Open in IMG/M
3300010360\|Ga0126372_12334849	Not Available	585	Open in IMG/M
3300010361\|Ga0126378_10377880	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	1528	Open in IMG/M
3300010361\|Ga0126378_11319775	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	816	Open in IMG/M
3300010361\|Ga0126378_13332580	Not Available	510	Open in IMG/M
3300010362\|Ga0126377_12516748	All Organisms → cellular organisms → Bacteria → Proteobacteria	590	Open in IMG/M
3300010366\|Ga0126379_10938647	All Organisms → cellular organisms → Bacteria → Proteobacteria	968	Open in IMG/M
3300010376\|Ga0126381_100281344	Not Available	2269	Open in IMG/M
3300010376\|Ga0126381_104548298	All Organisms → cellular organisms → Bacteria → Proteobacteria	535	Open in IMG/M
3300010376\|Ga0126381_105033734	Not Available	507	Open in IMG/M
3300010398\|Ga0126383_13225696	Not Available	533	Open in IMG/M
3300011120\|Ga0150983_10863318	Not Available	544	Open in IMG/M
3300011120\|Ga0150983_12816366	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2631	Open in IMG/M
3300011269\|Ga0137392_10774615	Not Available	793	Open in IMG/M
3300011271\|Ga0137393_11091156	All Organisms → cellular organisms → Bacteria → Proteobacteria	678	Open in IMG/M
3300012096\|Ga0137389_10072396	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2669	Open in IMG/M
3300012096\|Ga0137389_11424285	Not Available	588	Open in IMG/M
3300012180\|Ga0153974_1041264	All Organisms → cellular organisms → Bacteria → Proteobacteria	1008	Open in IMG/M
3300012189\|Ga0137388_10036180	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	3895	Open in IMG/M
3300012948\|Ga0126375_11487802	All Organisms → cellular organisms → Bacteria → Proteobacteria	578	Open in IMG/M
3300012971\|Ga0126369_10728127	Not Available	1070	Open in IMG/M
3300016270\|Ga0182036_11113518	All Organisms → cellular organisms → Bacteria → Proteobacteria	654	Open in IMG/M
3300016341\|Ga0182035_10484463	Not Available	1054	Open in IMG/M
3300016341\|Ga0182035_11709041	Not Available	569	Open in IMG/M
3300016371\|Ga0182034_11031620	All Organisms → cellular organisms → Bacteria → Proteobacteria	711	Open in IMG/M
3300016371\|Ga0182034_11182768	Not Available	665	Open in IMG/M
3300016387\|Ga0182040_10499084	All Organisms → cellular organisms → Bacteria → Proteobacteria	972	Open in IMG/M
3300016387\|Ga0182040_11321429	Not Available	609	Open in IMG/M
3300016404\|Ga0182037_11141262	Not Available	683	Open in IMG/M
3300016404\|Ga0182037_11733380	Not Available	557	Open in IMG/M
3300017823\|Ga0187818_10117450	Not Available	1152	Open in IMG/M
3300017932\|Ga0187814_10173770	Not Available	806	Open in IMG/M
3300017934\|Ga0187803_10280961	Not Available	662	Open in IMG/M
3300017970\|Ga0187783_10101851	Not Available	2117	Open in IMG/M
3300017970\|Ga0187783_10225680	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1373	Open in IMG/M
3300017972\|Ga0187781_10379988	All Organisms → cellular organisms → Bacteria → Proteobacteria	1007	Open in IMG/M
3300017975\|Ga0187782_10854365	All Organisms → cellular organisms → Bacteria → Proteobacteria	705	Open in IMG/M
3300017993\|Ga0187823_10290579	Not Available	565	Open in IMG/M
3300018062\|Ga0187784_11560897	Not Available	523	Open in IMG/M
3300020581\|Ga0210399_11431651	All Organisms → cellular organisms → Bacteria → Proteobacteria	539	Open in IMG/M
3300020582\|Ga0210395_10840917	Not Available	683	Open in IMG/M
3300020583\|Ga0210401_11111451	Not Available	649	Open in IMG/M
3300021088\|Ga0210404_10107113	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1418	Open in IMG/M
3300021170\|Ga0210400_11566814	Not Available	521	Open in IMG/M
3300021171\|Ga0210405_10207387	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1554	Open in IMG/M
3300021171\|Ga0210405_10448364	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis → unclassified Methylocystis → Methylocystis sp. H4A	1014	Open in IMG/M
3300021178\|Ga0210408_10051701	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3213	Open in IMG/M
3300021178\|Ga0210408_10619923	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	856	Open in IMG/M
3300021178\|Ga0210408_10772422	Not Available	754	Open in IMG/M
3300021401\|Ga0210393_11335972	Not Available	574	Open in IMG/M
3300021404\|Ga0210389_10184902	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1623	Open in IMG/M
3300021420\|Ga0210394_10251491	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis → unclassified Methylocystis → Methylocystis sp. H4A	1547	Open in IMG/M
3300021479\|Ga0210410_10840875	Not Available	804	Open in IMG/M
3300021559\|Ga0210409_10868147	Not Available	776	Open in IMG/M
3300021560\|Ga0126371_10564578	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	1287	Open in IMG/M
3300021560\|Ga0126371_11930844	All Organisms → cellular organisms → Bacteria → Proteobacteria	709	Open in IMG/M
3300021560\|Ga0126371_13449343	Not Available	534	Open in IMG/M
3300026341\|Ga0257151_1000564	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3035	Open in IMG/M
3300027842\|Ga0209580_10150838	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1144	Open in IMG/M
3300027842\|Ga0209580_10482163	Not Available	618	Open in IMG/M
3300027903\|Ga0209488_10003378	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	12818	Open in IMG/M
3300027903\|Ga0209488_10278647	All Organisms → cellular organisms → Bacteria → Proteobacteria	1251	Open in IMG/M
3300028906\|Ga0308309_10415930	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1155	Open in IMG/M
3300029636\|Ga0222749_10080214	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis → unclassified Methylocystis → Methylocystis sp. H4A	1499	Open in IMG/M
3300031543\|Ga0318516_10288341	Not Available	949	Open in IMG/M
3300031545\|Ga0318541_10614025	Not Available	608	Open in IMG/M
3300031573\|Ga0310915_10266316	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1207	Open in IMG/M
3300031715\|Ga0307476_10116428	All Organisms → cellular organisms → Bacteria → Proteobacteria	1900	Open in IMG/M
3300031715\|Ga0307476_10408853	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1003	Open in IMG/M
3300031736\|Ga0318501_10699915	All Organisms → cellular organisms → Bacteria → Proteobacteria	559	Open in IMG/M
3300031879\|Ga0306919_10961677	All Organisms → cellular organisms → Bacteria → Proteobacteria	654	Open in IMG/M
3300031890\|Ga0306925_11376087	All Organisms → cellular organisms → Bacteria → Proteobacteria	697	Open in IMG/M
3300031890\|Ga0306925_11827912	Not Available	581	Open in IMG/M
3300031912\|Ga0306921_10673564	Not Available	1191	Open in IMG/M
3300031912\|Ga0306921_11730704	Not Available	675	Open in IMG/M
3300031945\|Ga0310913_10415231	All Organisms → cellular organisms → Bacteria → Proteobacteria	955	Open in IMG/M
3300031946\|Ga0310910_10795326	All Organisms → cellular organisms → Bacteria → Proteobacteria	745	Open in IMG/M
3300031947\|Ga0310909_10518904	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	998	Open in IMG/M
3300032010\|Ga0318569_10629002	All Organisms → cellular organisms → Bacteria → Proteobacteria	500	Open in IMG/M
3300032076\|Ga0306924_11515397	Not Available	710	Open in IMG/M
3300032076\|Ga0306924_12272490	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	551	Open in IMG/M
3300032076\|Ga0306924_12293355	Not Available	548	Open in IMG/M
3300032261\|Ga0306920_100749111	All Organisms → cellular organisms → Bacteria → Proteobacteria	1437	Open in IMG/M
3300032261\|Ga0306920_104333543	All Organisms → cellular organisms → Bacteria → Proteobacteria	510	Open in IMG/M
3300033289\|Ga0310914_11491576	All Organisms → cellular organisms → Bacteria → Proteobacteria	579	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.54%
Host-Associated	Host-Associated	2.46%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	93.44%
Aquatic	Environmental → Aquatic	4.10%
Arthropoda	Host-Associated → Arthropoda	1.64%
Fungi	Host-Associated → Fungi	0.82%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	93.44%
Freshwater	Environmental → Aquatic → Freshwater	3.28%
Digestive System	Host-Associated → Arthropoda → Digestive System	1.64%
Sediment	Environmental → Aquatic → Sediment	0.82%
Mycelium	Host-Associated → Fungi → Mycelium	0.82%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	74.59%
Loam	Environmental → Terrestrial → Soil → Loam	14.75%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.10%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.28%
Gut	Host-Associated → Arthropoda → Digestive System → Gut	1.64%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.82%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.82%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	38.52%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	35.25%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	14.75%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.10%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	3.28%
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	1.64%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.82%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.82%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.82%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	22.95%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	21.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	15.57%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	11.48%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	8.20%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	4.10%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	4.10%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	3.28%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.64%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.64%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.64%
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	1.64%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.82%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.82%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300009826	Embiratermes neotenicus P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P1	Host-Associated	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010162	Labiotermes labralis P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Lab288 P1 (version 2)	Host-Associated	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012180	Attine ant fungus gardens microbial communities from Georgia, USA - TSGA058 MetaG	Host-Associated	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017934	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300017993	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_3	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300026341	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-17-A	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066395_105966572	3300004633	Tropical Forest Soil	MAVDHLKNLRRLREILRKQRRDLVATMVGAKKELTKFAPLVELQEACDAVEWALEDEAAAAKESERK*
Ga0066679_105981251	3300005176	Soil	MAVDHIKNLRSLREILRKQRRKLVATMLAAKKEPTKFTPLVQLQEACDAVEWALE
Ga0066388_1029833082	3300005332	Tropical Forest Soil	MAVDHLKNLRKLREILRKQRRELVATMVGAKKEPTKFAPLVELQEACDAVEWALEDEAAAAKEDEGE*
Ga0066388_1036914992	3300005332	Tropical Forest Soil	MAVDHHENLRRLREILRKQRRELVATMVGAKKEPKKFAPLVELQGACDAVEWALEDEAAAAKESETP*
Ga0066388_1042078482	3300005332	Tropical Forest Soil	MSVDDVANLRRLREILRDQRRKLVATMVSGKKEPTKFAPLIELQEACDAVEWAIEDETAAKKEGPR*
Ga0066388_1049315902	3300005332	Tropical Forest Soil	SAKKGLQMAVDHLKDLKRLREILRKQRRKLIATMVGAKKEPTKFAPLVELQEACDAVQWALEDEAAAAKEGERE*
Ga0066388_1056860122	3300005332	Tropical Forest Soil	MTADHIKNLRRLRDILRKQRRKLVATMVGAKKEPTKFAPLVQLQEACDAVEWALDDEAAAAKEGER*
Ga0066388_1062410971	3300005332	Tropical Forest Soil	MAVDHLEDLKRLREILRKRRRKLVATMVGAKKEPTKFAPLVELQEACDAVQWALEDEAAA
Ga0070731_111030841	3300005538	Surface Soil	MAVDDVANLRRLREILRDRRRKLVATMVGGKKEPTKFAPLVELQEACDAVEWALEDEAAAVAKDKRR*
Ga0070732_100449935	3300005542	Surface Soil	MAVDHIKNLRALREILRKRRRKLIAAMVGAKKETTKFAPLVQLQEACDAVEWALEDEAAAAKEAEK*
Ga0070732_101078204	3300005542	Surface Soil	MTDDHIKNLRRLREILRKQRRKLVATMIGAKKEPTKFAPLVQLQEACDAVEWALDDEAAAAKEGENEP*
Ga0066903_1008702163	3300005764	Tropical Forest Soil	MAVDHHENLRRLREILRKQRRELVATMVGAKKEPTKFAPLVELQEACDAVEWALEDEAAAAKESERQ*
Ga0066903_1008778504	3300005764	Tropical Forest Soil	MSVDDVANLRRLRQILRDQRRKLVATMVSGKKEPTKFAPLIELQEACDAVEWAIEDETAAKKEGPR*
Ga0066903_1018521952	3300005764	Tropical Forest Soil	MTVDHIENLRRLREILRKQRRKLVATMIGAKKEPTKFAPLVQLQEACDAVEWAIDDETAAVKEGENNEP*
Ga0066903_1026017762	3300005764	Tropical Forest Soil	MAGDHIKNLRRLREILRKQRRKLVATMVGAKKEPTKFAPLVQLQEACDAVEWALDDEAAAAKEGER*
Ga0066903_1026478062	3300005764	Tropical Forest Soil	MAVDHLKDLKRLREILRKQRRKLVATMVGAKREPTKFARLVELQEACDAVQWALEDEAAAAKEGER*
Ga0066903_1045594081	3300005764	Tropical Forest Soil	RLREILRKQRRKLIATMVGAKKEPTKFAPLVELQEACDAVQWALEDEAAAAKEDKRE*
Ga0066903_1056230561	3300005764	Tropical Forest Soil	KESHMAVDDVANLRKLREILRVRRRKLVATMVGGKKEPNKFGPLVELQEACDAVEWALEDEAAAAKKDERR*
Ga0075017_1013937792	3300006059	Watersheds	GSQMIVDHVNNLKKLRELLRKQRRELVVTMLDARKEPTKFAPLVELQEACDAVEWALDDEAAIAKDGEREMNEP*
Ga0070765_1000244851	3300006176	Soil	MAVDEVANLRRLREILRARRRKLVATMVGGKKEPTKFAPLVELQEACDAVEWALEDEAAAAK
Ga0099829_100521885	3300009038	Vadose Zone Soil	MAVDHLKNLRRLREILRKQRRELVATMVGARKEPTKFAPLVELQEACDAVEWALDDEAAAAKKGERE*
Ga0099792_100432471	3300009143	Vadose Zone Soil	MAVDHLKNLRRLREILRKQRRKLVATMVGAKREPTKFAPLVELQAACDAVEWALDDEAAAAKEVERE*
Ga0099792_104738551	3300009143	Vadose Zone Soil	MAVDHLKNLRRLREILRKQRRKLVATMVGAKSEPTKFARLVELQEACDAVEWALDDEAAAAKEGERE*
Ga0126374_101828813	3300009792	Tropical Forest Soil	MAVDHHENLRRLREILRKQRREVVATMVGAKKEPTKFAPLVELQAACDAVEWALEDEAAAAKESETP*
Ga0126374_104490711	3300009792	Tropical Forest Soil	MPLGLDKIPEDRPQRGLQMAVDHLKNLRRLREILRKQRREAVATMVGAKKEPTKFAPLVELQAACDAVEWALDDEAAAAKEGERE*
Ga0126374_109592211	3300009792	Tropical Forest Soil	QILRDQRRKLVATMVSGKKEPTKFAPLIELQEACDAVEWAIEDETAAKKEGPR*
Ga0123355_121683802	3300009826	Termite Gut	EILRKQRRELVAAMVDAKKEPTKFAPLVELQQACDAVEWALDDEDAARKQK*
Ga0126382_121849982	3300010047	Tropical Forest Soil	LSKALLEHSAAGVAVVNHLKNLRRLREILRRQRRELVATTVGAKKEPTKFEQLVELQQACDAVEWTLEDEAAAAKE
Ga0126373_116447682	3300010048	Tropical Forest Soil	MEKGLQMEVDHLENLRKLREILRRQRRELVATMVGAKKEPTKFAPFVELQQACDAVEWALDDEADAAKKGERQ*
Ga0126373_119621641	3300010048	Tropical Forest Soil	MAVDHHENLRRLREILRKQRRELVATMVGAKKEPTKFAPLVELQEACDAVEWALEDEAAAAKEGER*
Ga0131853_110446272	3300010162	Termite Gut	MEGDHLKNLRKLREMLRKRRRDLVAAMVDAKKEPKNFAPLVELQQACDAVEWAIDDEADAAKEGERG*
Ga0126370_108331561	3300010358	Tropical Forest Soil	MEGDHLKNLRKLREILRKQRRELVAAMVDAKKEPKNFAPLVELQQACDAVEWALDDEADAAKEGERE*
Ga0126370_111299201	3300010358	Tropical Forest Soil	MAVDHHENLRRLREILRKQRREVVATMVGAKKEPTKFAPLVALQEACDAVEWALEDEAAAAKESERQ*
Ga0126370_114883652	3300010358	Tropical Forest Soil	MTVEHLKDLKTLREILRKQRRKLIATMVGAKKEPTKFAPLVELQEACDAVQWALEDEAAAAKEDKRE*
Ga0126376_102956392	3300010359	Tropical Forest Soil	MAVDHLKNLRRLREILRKQRRDLVATMVGAKKELTKFAPLVELQEACDAVEWALEDEAAAAKKDEGE*
Ga0126376_106943182	3300010359	Tropical Forest Soil	MSKALLERSAKKGLQMAVNHLKDLKRLREILRKQRRKLIATMVGAKKEPTKFAPLVELQEACDAVQWALEDEAAAAKEDKRE*
Ga0126376_111135032	3300010359	Tropical Forest Soil	MAVDHHENLRRLREILRKQRREVVATMVGAKKEPTKFAPLVELQAACDAVEWALEDEAAAAKESERQ*
Ga0126372_102502111	3300010360	Tropical Forest Soil	ATIVAKGLHMSVDDVANLRRLRQILRDQRRKLVATMVSGKKEPTKFAPLIELQEACDAVEWAIEDETAAKKEGPR*
Ga0126372_123348491	3300010360	Tropical Forest Soil	MTVEHLKDLKTLREILRKQRRKLVATMVGAKKEPTKFAPLVELQEACDAVQWALEDEAAAAKEDKRE*
Ga0126378_103778802	3300010361	Tropical Forest Soil	MAVDHHENLRRLREILRKQRRELVATMVGAKKEPTKFAPLVELQEACDAVAWALEDEAAAAEGKRNTMSLGPSAVL*
Ga0126378_113197751	3300010361	Tropical Forest Soil	MAADDVTNLLRLREILRDRRRKLVATMMGGKKQPTNFAPFVELQEACDAVEWAIEDEAASAAKDERR*
Ga0126378_133325802	3300010361	Tropical Forest Soil	MAVDHLKNLRRLREILRKQRRDLVATMVGAKKELTKFAPLVELQEACDAVEWALED
Ga0126377_125167482	3300010362	Tropical Forest Soil	EQRSVRIFCSEGGQMAVDHLKNLRKLREILRKQRRELVATMVGAKKEPTKFAPLVELQEACDAVEWALEDEAAAAKESERQ*
Ga0126379_109386473	3300010366	Tropical Forest Soil	MSKALLERSAKKGLQMAVNHLKDLKRLREILRKQRRKLVATMVGAKKEPMKFAPLVELQEACDAVQWALEDEAAAAKEDERE*
Ga0126381_1002813441	3300010376	Tropical Forest Soil	MEVDHLENLRKLREILRRQRRELVATMVGAKKEPTKFAPLVELQQACDAVEWALDDEADAAKKGERQ*
Ga0126381_1045482982	3300010376	Tropical Forest Soil	MSKALLEHSAKKGLQMAVDHLKDLKRLREILRKQRRKLVATMAGAKREPTKFARLVVLQEACDAVQWALEDEAAAAKEGER*
Ga0126381_1050337341	3300010376	Tropical Forest Soil	STTPLFERFAGEGTQMAVDDVANLRRLREILRDRRRKLVDKMVGSKKEPKSFALLVELQEACDAVEWALEDEAAAAKKDEPR*
Ga0126383_132256962	3300010398	Tropical Forest Soil	MAVDHIKNLRAIRAILRRQRRKLVAKMIGAKKEPTKFLPLVQLQEACDAVQWALEDEAAAAKEGET*
Ga0150983_108633182	3300011120	Forest Soil	MNERADKTKSPGSVMAIDHITHLNKVREILRKQRRKLIATLATAKREPTKFDRLVELQQACDAVEWALEDEAAAANEHDGDTS*
Ga0150983_128163665	3300011120	Forest Soil	MAVDEVANLRRLREILRARRRKLVATMVGGKKEPTKFAPLVELQEACDAVEWALEDEAAAAKRDERQ*
Ga0137392_107746152	3300011269	Vadose Zone Soil	MAVDHLKNLRRLREILRKQRRELVATMVGARKEPTKFAPLVELQEACDAVEWALEDEAAAANEGERE*
Ga0137393_110911562	3300011271	Vadose Zone Soil	EHSAAKGLQMAVDHLKNLRRLREILRKQRRELVATMVGARKEPTKFAPLVELQEACDAVEWALDDEAAAAKKGERE*
Ga0137389_100723962	3300012096	Vadose Zone Soil	MAVDHLKNLRRLREILRKQRRKLVATMVGAKSEPTKFARLVELQEACDAVEWALDDEAAAAKEDERE*
Ga0137389_114242851	3300012096	Vadose Zone Soil	MAVDHLKNLRRLREILRKQRRKLVATMVGAKSEPTKFAPLVELQEACDAVEWALDDEAAAAKEGERE*
Ga0153974_10412642	3300012180	Attine Ant Fungus Gardens	MMVDHVNNLKRLRELLRKQRRELVIAMLDAKKEPTKFAPLVELQEACDAVEFALDDEAAIAKNGESEVNEL*
Ga0137388_100361802	3300012189	Vadose Zone Soil	MAVDHLKNLRRLREILRKQRRELVATMVGSRKGATKLAARVELQEACDAVEWALDDEAAAAKKGERE*
Ga0126375_114878022	3300012948	Tropical Forest Soil	LSKALLEHSAKMGLQMAVDHLEDLKRLREILRKRRRKLVATMVGAKKEPTKFAPLVELQEACDAVQWALEDEAAVAKEGERE*
Ga0126369_107281272	3300012971	Tropical Forest Soil	MAVDHHENLRRLREILRKQRRELVATMVGAKKEPTKFAPLIELQEACDAVEWALEDEAAAAKEGETP*
Ga0182036_111135182	3300016270	Soil	MTADHIKNLRRLREILRKRRRTLVATMMGAKKEPTKFAPLVELQQACDAVEWALEDEAAAAKADEGE
Ga0182035_104844632	3300016341	Soil	REILRKQRRKLVATMVGAKKEPTKFAPLVELQEACDAVQWALEDKAAAAKEGEGE
Ga0182035_117090412	3300016341	Soil	MEGDHLKNLRKLREILRKQRRELVAAMVDAKKEPKNFAPLVELQQACDAVEWALDDESDVAKEG
Ga0182034_110316203	3300016371	Soil	GLYMTDDHIKNLRRLREILRKRRRTLVATMMGAKKEPTKFAPLVELQQACDAVEWALDDEAAAAKEGENNEP
Ga0182034_111827681	3300016371	Soil	MSKALLEHSAKKGLQMAVDHLKDLKRLREILRKQRRKLVATMVGAKKEPTKFAPLVELQEACDAVQWALEDEAAAAKEGERE
Ga0182040_104990842	3300016387	Soil	MAVDHIKNLRRLREILRKQRRELVATMVGAKKEPTKFAPLVQLQEACDAVEWALVD
Ga0182040_113214292	3300016387	Soil	MAADHIKNLKRLREILRKQRRELVATMVGAKKEPTKFAPLVELQEACDADEWALDDEAAAAKEGENN
Ga0182037_111412621	3300016404	Soil	MAVDDVANLRRLREILRDRRRKLVAKMVGSKKEPKSFAPLVELQEACDAVEWALEDEAAAAKKDHPR
Ga0182037_117333801	3300016404	Soil	MTVDHLKNLKTLREILRKQRRKLVATMVGSKKEPTNFAPFVELQEACDAVEWALDDEATAAKEGK
Ga0187818_101174503	3300017823	Freshwater Sediment	MEGDHLKNLRTLREMLRKQRRQLVAAMVDANKEPENFAPLVELQQACDAVEWALDDETDAVKEGERE
Ga0187814_101737702	3300017932	Freshwater Sediment	MVVDHVNNLKRLRGLLRKQRRELVMAMLDAKKEPTKFAPLVELQEACDAVEFALDDEDAVAKNGEREMNEP
Ga0187803_102809611	3300017934	Freshwater Sediment	MAVDDVANLRRLREILRDRRRKLVATMVGGKKEPTKFAPLVELQEACDAVEWALEDEAAAAKNEGDEP
Ga0187783_101018512	3300017970	Tropical Peatland	MAVDDVANLRRLREILRDRRRKLVAKMVGGKREPTNFAPLVELQEACDAVEWALEDEATAAKKDEP
Ga0187783_102256801	3300017970	Tropical Peatland	MAVDDVANLRRLREILRDRRRKLVAKMVGGKKEPKSFAPLVELQEACDAVEWALEDEATAAKK
Ga0187781_103799882	3300017972	Tropical Peatland	MAVDHLKNLRRLREILRKQRRELVATMVGAKKEPTKFAPLVELQQACDAVEWALEDEAAAAKADEGE
Ga0187782_108543651	3300017975	Tropical Peatland	MAVDHLKNLRRLRELLRKQRRELVATMVGAKKEPTKFVPLVELQQACDAVEWALEDEAAAAKESER
Ga0187823_102905792	3300017993	Freshwater Sediment	MAGDHIKNLRRLREILRKQRRKLVATMVGAKKEPTKFAPLVQLQEACDAVEWALEDEAAAAKEGEG
Ga0187784_115608971	3300018062	Tropical Peatland	MAADDIANLLRLREILRDRRRKLVATMVGGKKRSTPFAPFVELQEACDAVEWALEDEAASAVKDER
Ga0210399_114316512	3300020581	Soil	GLLEHCVAKGSHMAVDEVANLRRLREILRARRRKLVATMVGGKKEPTKFAPLVELQEACDAVEWALEDEAAAAKRDERQ
Ga0210395_108409171	3300020582	Soil	MAVDYREDLDRLRAILRKQRRKLVSTTVGAKKEPTKLALLVELQEACDAVQWALEDEAAAAKEGER
Ga0210401_111114512	3300020583	Soil	MAIDHITNLTKVREILRKRRRKLIATLATAKREPTKFDRLVELQQVCDAVEWALEDEAAAAKEHDSDES
Ga0210404_101071131	3300021088	Soil	RSWFVESPAGVLVAWVSNGLLEQCVAKGSHMAVDDVANLRRLREILRARRRKLVATMVGGKKEPTKFAPLVELQEACDAVEWALEDEAAAAKRDERQ
Ga0210400_115668142	3300021170	Soil	MNERADKTKSPGSVMAIDHITHLNKVREILRKQRRKLIATLATAKREPTKFDRLVELQHACDAVEWALE
Ga0210405_102073874	3300021171	Soil	RADKTRSPGSAMAIDHITNLTKVREILRKRRRKLIATLATAKREPTKFDRLVELQQVCDAVEWALEDEAAAAKEHDSDES
Ga0210405_104483641	3300021171	Soil	MNERADKTKSPGSVMAIDHITNLSKVREILRKQRRKLIATLATAKREPTKFDRLVELQQACDAVEWALEDEAAAAKEHDGDTS
Ga0210408_100517013	3300021178	Soil	MAVDEVANLRRLREILRARRRKLVATMVGGKKEPTKFAPLVELQEACDAVEWALEDEAAAAKRDERQ
Ga0210408_106199232	3300021178	Soil	MAVDHLKNLRRLREILRKQRRKLVATMVGAKKEPTKFASLVELQEACDAVEWALDDEAAAAKEGEGE
Ga0210408_107724221	3300021178	Soil	MNERADKTKSPGSVMAIDHITNLSKVREILRKQRRKLIATLATAKREPTKFDRLVELQQVCDAVEWALEDEAAAAKEHDSDES
Ga0210393_113359721	3300021401	Soil	MATDHIKNLKKVRESLRRQRRKQVATLAAAKREPTKFAKLVELQQACDAVEWALEDEATAVDERDEESK
Ga0210389_101849022	3300021404	Soil	MAVDHLKDLKRLREILRKQRRKLVATMVGAKREPTKFARLVELQEACDAVQWALEDEAAAAKEGER
Ga0210394_102514913	3300021420	Soil	MAIDHITNLSKVREILRKQRRKLIATLATAKREPTKFDRLVELQQACDAVEWALEDEAAAAKEHDGDTS
Ga0210410_108408752	3300021479	Soil	MAIDHITNLTKVREILRKRRRKLIATLATAKREPTNFDRLVELQQACDAVEWALEDEAAAAKEHDSDES
Ga0210409_108681471	3300021559	Soil	MNERADKTKSPGSVMAIDHITNLTKVREILLKQRRKLIATLATAKREPTKFDRLVELQQACDAVEWALEDEAAAAKEHDNDTS
Ga0126371_105645782	3300021560	Tropical Forest Soil	MAVDHHENLRKLREILRKQRRELVATMVGAKKEPTKFAPLVELQGACDAVEWALEDEAAAAKESETP
Ga0126371_119308441	3300021560	Tropical Forest Soil	KDLKRLREILRKQRRKLVATMVGAKREPTKFARLVELQEACDAVQWALEDEAAAAKEGET
Ga0126371_134493431	3300021560	Tropical Forest Soil	MAVDHHENLRRLREILRKQRRELVATMVGAKKEPTKFAPLVELQGACDAVEWALEDEAAAAKESETP
Ga0257151_10005641	3300026341	Soil	MAVDHLKNLRRLREILRKQRRKLVATMVGAKREPTKFASLVELQEACDAVEWALDDEAAAAKEGEGE
Ga0209580_101508381	3300027842	Surface Soil	MAVDHIKNLRALREILRKRRRKLIAAMVGAKKETTKFAPLVQLQEACDAVEWALEDEAAAAKEAEK
Ga0209580_104821632	3300027842	Surface Soil	MTDDHIKNLRRLREILRKQRRKLVATMIGAKKEPTKFAPLVQLQEACDAVEWALDDEAAAAKEGENEP
Ga0209488_1000337810	3300027903	Vadose Zone Soil	MAVDHLKNLRRLREILRKQRRKLVATMVGAKREPTKFAPLVELQAACDAVEWALDDEAAAAKEVERE
Ga0209488_102786472	3300027903	Vadose Zone Soil	MAVDHLKNLRRLREILRKQRRKLVATMVGAKSEPTKFARLVELQEACDAVEWALDDEAAAAKEDERE
Ga0308309_104159304	3300028906	Soil	GLLFTVAMNERADKTKSPGSVMAIDHITNLSKVREILRKQRRKLIATLATAKREPTKFDRLVELQQACDAVEWALEDEAAAAKEHDSDES
Ga0222749_100802143	3300029636	Soil	MNERADKTKSPGSVMAIDHITNLNKVREILRKQRRKLIATLATAKREPTKFDRLVELQQACDAVEWALEDEAAAAK
Ga0318516_102883412	3300031543	Soil	MAADHIKNLKRLREILRKQRRELVATMVGAKKEPTKFAPLVELQEACDAVEWALDDEAAAAKEGENNEP
Ga0318541_106140251	3300031545	Soil	MAADHIKNLKRLREILRKQRRELVATMVGAKKEPTKFAPLVELQEACDAVEWALDDEAAAAKEGENNE
Ga0310915_102663161	3300031573	Soil	LYMAADHIKNLKRLREILRKQRRELVATMVGAKKEPTKFAPLVELQEACDAVEWALDDEAAAAKEGENNEP
Ga0307476_101164283	3300031715	Hardwood Forest Soil	MAVDHLEDLKRLRTILRKQRRKLVATMVGAKKEPTKFALLVELQEACDAVQWALEDEVAAAKEGER
Ga0307476_104088533	3300031715	Hardwood Forest Soil	MAVDHLKDLKRLRDILRKQRRKLVATMLGAKKEPTKFTRLVELQEACDAVQWALEDEAAAAKESER
Ga0318501_106999151	3300031736	Soil	NLKRLREILRKQRRELVATMVGAKKEPTKFAPLVELQEACDAVEWALDDEAAAAKEGENNEP
Ga0306919_109616772	3300031879	Soil	MAVDHIKNLRRLREILRKQRRELVATMVGAKKEPTKFAPLVQLQEACDAVEWALDDEAAAAKEGENNEP
Ga0306925_113760871	3300031890	Soil	MAVDHIKNLRRLREILRKQRRELVATMVGAKKEPTKFAPLVQLQEACDAVEWALDDEATAAKEGEE
Ga0306925_118279121	3300031890	Soil	MEGDHLKNLRTLREILRKQRRELVAAMVYAKKEPTKFAPLVELQQACDAVEWALDDEAAAQEGK
Ga0306921_106735642	3300031912	Soil	MAVDHIKNLRRLREILRKQRRKLVATMIGAKKEPTKYAPLVELQEACDAVEWALDDEATAAKEGEE
Ga0306921_117307041	3300031912	Soil	RSVRTLVAKESHMAVDDVANLRRLREILRARRRKLVATMVGGKKEPNKFGPLVELQEACDAVEWALEDEATEAKKD
Ga0310913_104152312	3300031945	Soil	MAVDHIKNLKRLREILRKQRRELVATMVGAKKEPTKFAPLVELQEACDAVEWALDDEAAAAKEGENNEP
Ga0310910_107953263	3300031946	Soil	LREILRKQRRELVATMVGAKKEPTKFAPLVELQEACDAVEWALDDEAAAAKEGENNEP
Ga0310909_105189043	3300031947	Soil	MTADHIKNLRRLREILRKQRRELVATMIGAKKEPTKFAPLVELQEACDAVEWALDDEAAAAKEGENNEP
Ga0318569_106290021	3300032010	Soil	LREILRKQRRELVATMVGAKKEPTKFAPLVELQEACDAVEWALDDEATAAKEGEE
Ga0306924_115153971	3300032076	Soil	MAVDHIKNLRRLREILRKQRRELVATMVGAKKEPTKFAPLVQLQEACDAVEWALDDEATA
Ga0306924_122724902	3300032076	Soil	MEGDHLKNLRKLREILRKQRRELVAAMVDAKKEPKNFAPLVELQQACDAVEWALDDESDVAKEGERE
Ga0306924_122933551	3300032076	Soil	IQMTVEHLKDLKRLREILRKQRRKLVTTMVGAKKEPTKFAPLVELQEACDAVQWALEDEAAAAKEGEGE
Ga0306920_1007491111	3300032261	Soil	MTVEHLKDLKRLREILRKQRRKLVTTMVGAKKEPTKFAPLVELQEACDAVQWALEDEAAA
Ga0306920_1043335432	3300032261	Soil	KKGLQMAVDHFKDLKRLREILRKQRRKLVATMVGAKKEPTKFASLVELQEACDAVQWALEDEAAAAKEGEE
Ga0310914_114915762	3300033289	Soil	KGLYMAADHIKNLKRLREILRKQRRELVATMVGAKKEPTKFAPLVELQEACDAVEWALDDEAAAAKEGENNEP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F071457

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences