Metagenome Family F071316

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F071316
Family Type	Metagenome
Number of Sequences	122
Average Sequence Length	49 residues
Representative Sequence	MKIFRRNFIKTFFLSLPVLFLMKFDLLSFRSKKTKLKKNKNFIWYLRHDD
Number of Associated Samples	77
Number of Associated Scaffolds	122

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	41.80 %
% of genes from short scaffolds (< 2000 bps)	72.13 %
Associated GOLD sequencing projects	62
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.36

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (75.410 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (45.902 % of family members)
Environment Ontology (ENVO)	Unclassified (90.984 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (89.344 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 61.54% β-sheet: 0.00% Coil/Unstructured: 38.46%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.36
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.36
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 122 Family Scaffolds
PF08241	Methyltransf_11	22.95
PF13489	Methyltransf_23	9.02
PF00106	adh_short	4.92
PF07992	Pyr_redox_2	4.92
PF04055	Radical_SAM	4.10
PF01494	FAD_binding_3	4.10
PF05199	GMC_oxred_C	4.10
PF00535	Glycos_transf_2	2.46
PF01370	Epimerase	2.46
PF01041	DegT_DnrJ_EryC1	1.64
PF02310	B12-binding	1.64
PF00501	AMP-binding	0.82
PF00953	Glycos_transf_4	0.82
PF00583	Acetyltransf_1	0.82
PF01040	UbiA	0.82
PF00890	FAD_binding_2	0.82
PF01467	CTP_transf_like	0.82
PF00551	Formyl_trans_N	0.82
PF01266	DAO	0.82
PF01583	APS_kinase	0.82
PF01230	HIT	0.82

COG ID	Name	Functional Category	% Frequency in 122 Family Scaffolds
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	8.20
COG0578	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	4.10
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	4.10
COG0665	Glycine/D-amino acid oxidase (deaminating)	Amino acid transport and metabolism [E]	4.10
COG2303	Choline dehydrogenase or related flavoprotein	Lipid transport and metabolism [I]	4.10
COG0399	dTDP-4-amino-4,6-dideoxygalactose transaminase	Cell wall/membrane/envelope biogenesis [M]	1.64
COG0436	Aspartate/methionine/tyrosine aminotransferase	Amino acid transport and metabolism [E]	1.64
COG0520	Selenocysteine lyase/Cysteine desulfurase	Amino acid transport and metabolism [E]	1.64
COG0626	Cystathionine beta-lyase/cystathionine gamma-synthase	Amino acid transport and metabolism [E]	1.64
COG1104	Cysteine desulfurase/Cysteine sulfinate desulfinase IscS or related enzyme, NifS family	Amino acid transport and metabolism [E]	1.64
COG2873	O-acetylhomoserine/O-acetylserine sulfhydrylase, pyridoxal phosphate-dependent	Amino acid transport and metabolism [E]	1.64
COG0472	UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase	Cell wall/membrane/envelope biogenesis [M]	0.82
COG0529	Adenylylsulfate kinase or related kinase	Inorganic ion transport and metabolism [P]	0.82

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	76.23 %
Unclassified	root	N/A	23.77 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	76.23 %
Unclassified	root	N/A	23.77 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	75.41 %
Unclassified	root	N/A	23.77 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.82 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	58.20 %
Unclassified	root	N/A	23.77 %
TACK group	clade	All Organisms → cellular organisms → Archaea → TACK group	0.82 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.82 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	37.70 %
Unclassified	root	N/A	23.77 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	4.10 %
Thaumarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	0.82 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.82 %

Name	Rank	Taxonomy	Distribution
Rickettsiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales	27.05 %
Unclassified	root	N/A	23.77 %
Pelagibacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales	4.10 %
Pseudomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales	1.64 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.82 %
Thaumarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	0.82 %

Name	Rank	Taxonomy	Distribution
unclassified Rickettsiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales	27.05 %
Unclassified	root	N/A	23.77 %
Pelagibacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae	4.10 %
Pseudomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae	1.64 %
Cytophagia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia	0.82 %
Thaumarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	0.82 %

Name	Rank	Taxonomy	Distribution
Rickettsiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	27.05 %
Unclassified	root	N/A	23.77 %
Candidatus Pelagibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	4.10 %
Pseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	1.64 %
Cytophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales	0.82 %
Thaumarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	0.82 %

Name	Rank	Taxonomy	Distribution
Rickettsiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	27.05 %
Unclassified	root	N/A	23.77 %
unclassified Candidatus Pelagibacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter	1.64 %
Pseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	1.64 %
Flammeovirgaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Flammeovirgaceae	0.82 %
Thaumarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	0.82 %

Name	Rank	Taxonomy	Distribution
Rickettsiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	27.05 %
Unclassified	root	N/A	23.77 %
Pseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	1.64 %
Candidatus Pelagibacter sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp.	0.82 %
Candidatus Pelagibacter sp. RS39	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. RS39	0.82 %
unclassified Flammeovirgaceae	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Flammeovirgaceae → unclassified Flammeovirgaceae	0.82 %
Thaumarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	0.82 %

Name	Rank	Taxonomy	Distribution
Rickettsiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	27.05 %
Unclassified	root	N/A	23.77 %
Pseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	1.64 %
Flammeovirgaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Flammeovirgaceae → unclassified Flammeovirgaceae → Flammeovirgaceae bacterium	0.82 %
Candidatus Pelagibacter sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp.	0.82 %
Candidatus Pelagibacter sp. RS39	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. RS39	0.82 %
Thaumarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	0.82 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001584\|JGI12074J15755_1007019	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	766	Open in IMG/M
3300001845\|shallow_1023249	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	835	Open in IMG/M
3300003702\|PicMicro_10003197	All Organisms → cellular organisms → Bacteria → Proteobacteria	15261	Open in IMG/M
3300005398\|Ga0066858_10001322	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	8373	Open in IMG/M
3300005398\|Ga0066858_10004980	All Organisms → cellular organisms → Bacteria → Proteobacteria	4177	Open in IMG/M
3300005398\|Ga0066858_10084873	All Organisms → cellular organisms → Bacteria	927	Open in IMG/M
3300005398\|Ga0066858_10106620	All Organisms → cellular organisms → Bacteria → Proteobacteria	817	Open in IMG/M
3300005398\|Ga0066858_10109435	Not Available	805	Open in IMG/M
3300005399\|Ga0066860_10275402	All Organisms → cellular organisms → Bacteria → Proteobacteria	560	Open in IMG/M
3300005400\|Ga0066867_10081714	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1237	Open in IMG/M
3300005408\|Ga0066848_10009697	All Organisms → cellular organisms → Bacteria → Proteobacteria	2866	Open in IMG/M
3300005408\|Ga0066848_10038603	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	1334	Open in IMG/M
3300005423\|Ga0066828_10011489	All Organisms → cellular organisms → Bacteria	3403	Open in IMG/M
3300005424\|Ga0066826_10205958	Not Available	678	Open in IMG/M
3300005425\|Ga0066859_10047156	All Organisms → cellular organisms → Bacteria	1317	Open in IMG/M
3300005425\|Ga0066859_10050211	All Organisms → cellular organisms → Bacteria	1274	Open in IMG/M
3300005426\|Ga0066847_10008578	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3384	Open in IMG/M
3300005426\|Ga0066847_10016140	All Organisms → cellular organisms → Bacteria	2427	Open in IMG/M
3300005426\|Ga0066847_10048732	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	1354	Open in IMG/M
3300005426\|Ga0066847_10127505	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	790	Open in IMG/M
3300005426\|Ga0066847_10207221	Not Available	598	Open in IMG/M
3300005426\|Ga0066847_10215283	Not Available	585	Open in IMG/M
3300005427\|Ga0066851_10135100	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	791	Open in IMG/M
3300005431\|Ga0066854_10021129	All Organisms → cellular organisms → Bacteria	2150	Open in IMG/M
3300005508\|Ga0066868_10126748	All Organisms → cellular organisms → Bacteria → Proteobacteria	796	Open in IMG/M
3300005508\|Ga0066868_10154354	Not Available	712	Open in IMG/M
3300005509\|Ga0066827_10333935	Not Available	511	Open in IMG/M
3300005520\|Ga0066864_10003966	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5142	Open in IMG/M
3300005551\|Ga0066843_10009185	All Organisms → cellular organisms → Bacteria	3194	Open in IMG/M
3300005592\|Ga0066838_10083656	All Organisms → cellular organisms → Bacteria → Proteobacteria	904	Open in IMG/M
3300005604\|Ga0066852_10029060	All Organisms → cellular organisms → Bacteria → Proteobacteria	2123	Open in IMG/M
3300005945\|Ga0066381_10112967	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	771	Open in IMG/M
3300005945\|Ga0066381_10176378	All Organisms → cellular organisms → Bacteria	613	Open in IMG/M
3300006013\|Ga0066382_10031428	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	1903	Open in IMG/M
3300006308\|Ga0068470_1530847	All Organisms → cellular organisms → Bacteria → Proteobacteria	666	Open in IMG/M
3300006310\|Ga0068471_1451783	Not Available	1387	Open in IMG/M
3300006310\|Ga0068471_1610979	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	825	Open in IMG/M
3300006323\|Ga0068497_1396256	Not Available	1008	Open in IMG/M
3300006330\|Ga0068483_1340522	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	502	Open in IMG/M
3300006331\|Ga0068488_1215356	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp.	504	Open in IMG/M
3300006335\|Ga0068480_1545320	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	518	Open in IMG/M
3300006336\|Ga0068502_1375471	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	2364	Open in IMG/M
3300006339\|Ga0068481_1157589	All Organisms → cellular organisms → Bacteria	2754	Open in IMG/M
3300006339\|Ga0068481_1257009	All Organisms → cellular organisms → Bacteria	2564	Open in IMG/M
3300006339\|Ga0068481_1298654	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	1134	Open in IMG/M
3300006339\|Ga0068481_1455829	All Organisms → cellular organisms → Bacteria	1294	Open in IMG/M
3300006900\|Ga0066376_10142420	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1467	Open in IMG/M
3300006902\|Ga0066372_10290539	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	921	Open in IMG/M
3300007283\|Ga0066366_10244440	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	749	Open in IMG/M
3300007291\|Ga0066367_1092293	Not Available	1108	Open in IMG/M
3300012950\|Ga0163108_10710081	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	650	Open in IMG/M
3300012950\|Ga0163108_10758621	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	627	Open in IMG/M
3300020262\|Ga0211537_1000530	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	21630	Open in IMG/M
3300020272\|Ga0211566_1004587	All Organisms → cellular organisms → Bacteria → Proteobacteria	4170	Open in IMG/M
3300020272\|Ga0211566_1008360	All Organisms → cellular organisms → Bacteria → Proteobacteria	2831	Open in IMG/M
3300020275\|Ga0211562_1006271	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3476	Open in IMG/M
3300020322\|Ga0211563_1008752	All Organisms → cellular organisms → Bacteria → Proteobacteria	2779	Open in IMG/M
3300020327\|Ga0211573_1002605	All Organisms → cellular organisms → Bacteria → Proteobacteria	7616	Open in IMG/M
3300020327\|Ga0211573_1023469	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	1740	Open in IMG/M
3300020327\|Ga0211573_1043811	All Organisms → cellular organisms → Bacteria → Proteobacteria	1163	Open in IMG/M
3300020327\|Ga0211573_1052273	Not Available	1036	Open in IMG/M
3300020327\|Ga0211573_1057038	Not Available	979	Open in IMG/M
3300020328\|Ga0211567_1016640	Not Available	1815	Open in IMG/M
3300020330\|Ga0211572_1002326	All Organisms → cellular organisms → Bacteria → Proteobacteria	8184	Open in IMG/M
3300020330\|Ga0211572_1011559	All Organisms → cellular organisms → Bacteria	2765	Open in IMG/M
3300020330\|Ga0211572_1065662	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	887	Open in IMG/M
3300020330\|Ga0211572_1121514	All Organisms → cellular organisms → Bacteria → Proteobacteria	588	Open in IMG/M
3300020338\|Ga0211571_1008940	All Organisms → cellular organisms → Bacteria → Proteobacteria	3336	Open in IMG/M
3300020338\|Ga0211571_1106812	Not Available	646	Open in IMG/M
3300020344\|Ga0211570_1044682	Not Available	1115	Open in IMG/M
3300020344\|Ga0211570_1073176	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	789	Open in IMG/M
3300020354\|Ga0211608_10034799	All Organisms → cellular organisms → Bacteria → Proteobacteria	1224	Open in IMG/M
3300020373\|Ga0211660_10068577	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	1439	Open in IMG/M
3300020373\|Ga0211660_10165449	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	784	Open in IMG/M
3300020425\|Ga0211549_10345442	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	606	Open in IMG/M
3300020425\|Ga0211549_10380056	Not Available	578	Open in IMG/M
3300020434\|Ga0211670_10483826	Not Available	527	Open in IMG/M
3300020447\|Ga0211691_10142470	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	904	Open in IMG/M
3300022225\|Ga0187833_10023773	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	4714	Open in IMG/M
3300022225\|Ga0187833_10046644	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3046	Open in IMG/M
3300022225\|Ga0187833_10084885	All Organisms → cellular organisms → Bacteria	2069	Open in IMG/M
3300022225\|Ga0187833_10096207	All Organisms → cellular organisms → Bacteria → Proteobacteria	1908	Open in IMG/M
3300022225\|Ga0187833_10235895	Not Available	1051	Open in IMG/M
3300022227\|Ga0187827_10037095	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. RS39	4115	Open in IMG/M
3300022227\|Ga0187827_10045800	All Organisms → cellular organisms → Bacteria	3573	Open in IMG/M
3300022227\|Ga0187827_10081982	All Organisms → cellular organisms → Bacteria	2445	Open in IMG/M
3300022227\|Ga0187827_10375377	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	890	Open in IMG/M
3300022227\|Ga0187827_10604242	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	639	Open in IMG/M
3300025265\|Ga0208467_1005480	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	2852	Open in IMG/M
3300026074\|Ga0208747_1014250	Not Available	2017	Open in IMG/M
3300026087\|Ga0208113_1036528	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	1370	Open in IMG/M
3300026188\|Ga0208274_1011590	All Organisms → cellular organisms → Bacteria	2817	Open in IMG/M
3300026199\|Ga0208638_1122438	Not Available	724	Open in IMG/M
3300026200\|Ga0208894_1036523	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Flammeovirgaceae → unclassified Flammeovirgaceae → Flammeovirgaceae bacterium	1635	Open in IMG/M
3300026205\|Ga0208406_1096543	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	684	Open in IMG/M
3300026206\|Ga0207988_1006846	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3840	Open in IMG/M
3300026208\|Ga0208640_1047480	Not Available	1037	Open in IMG/M
3300026210\|Ga0208642_1021185	All Organisms → cellular organisms → Bacteria	1758	Open in IMG/M
3300026210\|Ga0208642_1040027	All Organisms → cellular organisms → Bacteria	1152	Open in IMG/M
3300026211\|Ga0208132_1010748	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2575	Open in IMG/M
3300026211\|Ga0208132_1058079	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	928	Open in IMG/M
3300026212\|Ga0208409_1045784	Not Available	1110	Open in IMG/M
3300026256\|Ga0208639_1076083	Not Available	866	Open in IMG/M
3300026256\|Ga0208639_1085789	All Organisms → cellular organisms → Bacteria	797	Open in IMG/M
3300026261\|Ga0208524_1054391	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	1151	Open in IMG/M
3300026265\|Ga0208765_1102771	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	734	Open in IMG/M
3300026267\|Ga0208278_1145248	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	515	Open in IMG/M
3300026269\|Ga0208766_1164332	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	562	Open in IMG/M
3300027700\|Ga0209445_1200392	Not Available	544	Open in IMG/M
3300027827\|Ga0209035_10183669	Not Available	1044	Open in IMG/M
3300028488\|Ga0257113_1073173	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1080	Open in IMG/M
3300031800\|Ga0310122_10287776	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	729	Open in IMG/M
3300031801\|Ga0310121_10396505	Not Available	785	Open in IMG/M
3300031801\|Ga0310121_10596553	Not Available	599	Open in IMG/M
3300031804\|Ga0310124_10359856	All Organisms → cellular organisms → Bacteria → Proteobacteria	872	Open in IMG/M
3300031804\|Ga0310124_10834120	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	513	Open in IMG/M
3300031861\|Ga0315319_10535633	Not Available	583	Open in IMG/M
3300032132\|Ga0315336_1103285	Not Available	1229	Open in IMG/M
3300032278\|Ga0310345_10730666	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	960	Open in IMG/M
3300032278\|Ga0310345_11215720	Not Available	737	Open in IMG/M
3300032820\|Ga0310342_101268875	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	872	Open in IMG/M
3300032820\|Ga0310342_103254818	All Organisms → cellular organisms → Bacteria	538	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	75.41%
Unclassified	Environmental → Aquatic → Marine → Unclassified	21.31%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	1.64%
Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents	1.64%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	63.93%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	21.31%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	5.74%
Aphotic Zone	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone	5.74%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	1.64%
Unclassified	Environmental → Aquatic → Marine → Hydrothermal Vents → Unclassified	1.64%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	45.90%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	21.31%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	11.48%
Marine	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone → Marine	5.74%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	4.92%
Marine	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Marine	4.10%
Deep Ocean	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean	1.64%
Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Seawater	1.64%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	1.64%
Hydrothermal Vent Plume	Environmental → Aquatic → Marine → Hydrothermal Vents → Unclassified → Hydrothermal Vent Plume	0.82%
Marine, Hydrothermal Vent Plume	Environmental → Aquatic → Marine → Hydrothermal Vents → Unclassified → Marine, Hydrothermal Vent Plume	0.82%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001584	Marine microbial communities from the Deep Pacific Ocean - MP2097	Environmental	Open in IMG/M
3300001845	Hydrothermal vent plume microbial communities from the Mid Cayman Rise - Shallow Sites - lt1kb	Environmental	Open in IMG/M
3300003702	Hydrothermal vent plume microbial communities from the Mid Cayman Rise - Piccard2013-Plume - Microbial Assembly	Environmental	Open in IMG/M
3300005398	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV201	Environmental	Open in IMG/M
3300005399	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F14-07SV275	Environmental	Open in IMG/M
3300005400	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F12-01SV261	Environmental	Open in IMG/M
3300005408	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201310SV72	Environmental	Open in IMG/M
3300005423	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306SV47	Environmental	Open in IMG/M
3300005424	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306SV49	Environmental	Open in IMG/M
3300005425	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV199	Environmental	Open in IMG/M
3300005426	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201310SV74	Environmental	Open in IMG/M
3300005427	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV65	Environmental	Open in IMG/M
3300005431	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV75	Environmental	Open in IMG/M
3300005508	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F12-01SV259	Environmental	Open in IMG/M
3300005509	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306SV51	Environmental	Open in IMG/M
3300005520	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F10-02SV251	Environmental	Open in IMG/M
3300005551	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302PF89A	Environmental	Open in IMG/M
3300005592	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV89	Environmental	Open in IMG/M
3300005604	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV63	Environmental	Open in IMG/M
3300005945	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S23_td_AAIW_ad_876m_LV_B	Environmental	Open in IMG/M
3300006013	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S23_td_NADW_ad_2500m_LV_B	Environmental	Open in IMG/M
3300006308	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_2_0500m	Environmental	Open in IMG/M
3300006310	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_3_0500m	Environmental	Open in IMG/M
3300006323	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT237_3_0500m	Environmental	Open in IMG/M
3300006330	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT232_1_1000m	Environmental	Open in IMG/M
3300006331	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT233_1_1000m	Environmental	Open in IMG/M
3300006335	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT232_2_0500m	Environmental	Open in IMG/M
3300006336	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_2_0500m	Environmental	Open in IMG/M
3300006339	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT232_3_0500m	Environmental	Open in IMG/M
3300006900	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_Bottom_ad_5009_LV_A	Environmental	Open in IMG/M
3300006902	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_250_ad_251m_LV_A	Environmental	Open in IMG/M
3300007283	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S7_td_250_ad_252m_LV_B	Environmental	Open in IMG/M
3300007291	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S7_td_AAIW_ad_750m_LV_A	Environmental	Open in IMG/M
3300012950	Marine microbial communities from the Central Pacific Ocean - Fk160115 155m metaG	Environmental	Open in IMG/M
3300020262	Marine microbial communities from Tara Oceans - TARA_B100000097 (ERX556100-ERR599172)	Environmental	Open in IMG/M
3300020272	Marine microbial communities from Tara Oceans - TARA_B100001971 (ERX556120-ERR599127)	Environmental	Open in IMG/M
3300020275	Marine microbial communities from Tara Oceans - TARA_B100002003 (ERX555991-ERR599175)	Environmental	Open in IMG/M
3300020322	Marine microbial communities from Tara Oceans - TARA_B100002003 (ERX556138-ERR599051)	Environmental	Open in IMG/M
3300020327	Marine microbial communities from Tara Oceans - TARA_B100001964 (ERX556115-ERR599070)	Environmental	Open in IMG/M
3300020328	Marine microbial communities from Tara Oceans - TARA_B100001971 (ERX555937-ERR599015)	Environmental	Open in IMG/M
3300020330	Marine microbial communities from Tara Oceans - TARA_B100001964 (ERX556097-ERR599147)	Environmental	Open in IMG/M
3300020338	Marine microbial communities from Tara Oceans - TARA_B100001964 (ERX555920-ERR599099)	Environmental	Open in IMG/M
3300020344	Marine microbial communities from Tara Oceans - TARA_B100001964 (ERX556104-ERR598987)	Environmental	Open in IMG/M
3300020354	Marine microbial communities from Tara Oceans - TARA_B100000408 (ERX555905-ERR599164)	Environmental	Open in IMG/M
3300020373	Marine microbial communities from Tara Oceans - TARA_B100000959 (ERX555949-ERR598946)	Environmental	Open in IMG/M
3300020425	Marine microbial communities from Tara Oceans - TARA_B100001765 (ERX556083-ERR598964)	Environmental	Open in IMG/M
3300020434	Marine microbial communities from Tara Oceans - TARA_B100001013 (ERX555944-ERR599071)	Environmental	Open in IMG/M
3300020447	Marine microbial communities from Tara Oceans - TARA_B100000745 (ERX556090-ERR599159)	Environmental	Open in IMG/M
3300022225	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014_SV_400_PacBio MetaG (Illumina Assembly)	Environmental	Open in IMG/M
3300022227	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014_SV_150_PacBio MetaG (Illumina Assembly)	Environmental	Open in IMG/M
3300025265	Marine microbial communities from the Deep Pacific Ocean - MP2098 (SPAdes)	Environmental	Open in IMG/M
3300026074	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S7_td_AAIW_ad_750m_LV_A (SPAdes)	Environmental	Open in IMG/M
3300026087	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S7_td_NADW_ad_2505m_LV_A (SPAdes)	Environmental	Open in IMG/M
3300026188	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306SV43 (SPAdes)	Environmental	Open in IMG/M
3300026199	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306SV51 (SPAdes)	Environmental	Open in IMG/M
3300026200	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306SV49 (SPAdes)	Environmental	Open in IMG/M
3300026205	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302PF89A (SPAdes)	Environmental	Open in IMG/M
3300026206	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201310SV74 (SPAdes)	Environmental	Open in IMG/M
3300026208	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201310SV72 (SPAdes)	Environmental	Open in IMG/M
3300026210	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F10-02SV251 (SPAdes)	Environmental	Open in IMG/M
3300026211	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV199 (SPAdes)	Environmental	Open in IMG/M
3300026212	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV201 (SPAdes)	Environmental	Open in IMG/M
3300026256	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201310SV76 (SPAdes)	Environmental	Open in IMG/M
3300026261	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV61 (SPAdes)	Environmental	Open in IMG/M
3300026265	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV203 (SPAdes)	Environmental	Open in IMG/M
3300026267	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F12-01SV259 (SPAdes)	Environmental	Open in IMG/M
3300026269	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F12-01SV263 (SPAdes)	Environmental	Open in IMG/M
3300027700	Marine microbial communities from the Southern Atlantic Ocean, analyzing organic carbon cycling - NADW_A/KNORR_S2/LV (SPAdes)	Environmental	Open in IMG/M
3300027827	Marine microbial communities from the Southern Atlantic Ocean, analyzing organic carbon cycling - AAIW_A/KNORR_S2/LV (SPAdes)	Environmental	Open in IMG/M
3300028488	Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2015_P26_1320m	Environmental	Open in IMG/M
3300031800	Marine microbial communities from Western Arctic Ocean, Canada - CB6_Bottom_1051	Environmental	Open in IMG/M
3300031801	Marine microbial communities from Western Arctic Ocean, Canada - CB27_Tmax_986	Environmental	Open in IMG/M
3300031804	Marine microbial communities from Western Arctic Ocean, Canada - CB11b_AW_Bot5	Environmental	Open in IMG/M
3300031861	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 3416	Environmental	Open in IMG/M
3300032132	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - ASW #5	Environmental	Open in IMG/M
3300032278	Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-500_MG	Environmental	Open in IMG/M
3300032820	Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - S1503-DNA-20-500_MG	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12074J15755_10070192	3300001584	Deep Ocean	NFIKTFFLSLPVLFLMKFDLLSFRSKKTKLKKNKNFIWYLRHDD*
shallow_10232491	3300001845	Hydrothermal Vent Plume	MKIFRRNFIKTFFLSLPVLLLMKFDLLSSRSKKTKLKKNKNFIWYLRHDD*
PicMicro_1000319718	3300003702	Marine, Hydrothermal Vent Plume	MKIFRRNFIKTFFLSLPVLFLMKFDLLSSRSKKTKLKKNKNFIWYLRHDD*
Ga0066858_100013224	3300005398	Marine	MKIFRRNFIKIFFLSFPVLFLMKFDLLSFRSKKTKLKKYKNFVWYLNNND*
Ga0066858_100049804	3300005398	Marine	MKIFRRNFIKIFFLSLPVLFLMKFDLFSYRSKKTKLKKNKNFIWYLRYDD*
Ga0066858_100848732	3300005398	Marine	MKIFRRNFIKTFFLPLPFLLLMKFDLLSFRSKKTKLKKNKNFIWYLRHDD*
Ga0066858_101066202	3300005398	Marine	MKTFRRNFLKIVFLSLPVLYLMKFNLFPFHLKKTKLKKNKNFIWFLRYDD*
Ga0066858_101094351	3300005398	Marine	MKIFRRNFIKTFFLSLPVLFLMKFDLLSFRSKKTKLKKNKNF
Ga0066860_102754022	3300005399	Marine	MKKFRRNFIKTFFLSLPVLFLMKFDLLSFRSKKTKLKKNKNFIWYLRHDD*
Ga0066867_100817141	3300005400	Marine	MKIFRRNFIKTFFLPLPFLLLMKFDLLSFRSKKTKLKKNKNFIWYLRH
Ga0066848_100096972	3300005408	Marine	MKIFRRNFIKTFFLSLPVLFLMKFDLLYFRSKKTKLKKNKNFIWYLRHDD*
Ga0066848_100386031	3300005408	Marine	MKIFRRNFIKTFFLSLPVLFLMKFDLLSSRSKKNKLKKNKNFIWYLRHDD*
Ga0066828_100114894	3300005423	Marine	MKMLRRNFLKIFFSSLPILFLIKFDLFSFPSRKTKLKKNKNFVWYLNNGD*
Ga0066826_102059582	3300005424	Marine	MKKFRRNFIKTFFLSLPVLFLMKFDLLSFRSKKTKLKKNKNFIWY
Ga0066859_100471561	3300005425	Marine	MKIFRRNFIKTFFLPLPVLFLMKFDLLSFRSKKTKLKKNKNFVWYLRHDD*
Ga0066859_100502113	3300005425	Marine	MKKFRRNFIKTFFLSLPVLFLMKFDLLSFRSKKTKLKKNKNFI
Ga0066847_100085785	3300005426	Marine	FIKTFFLSLPVLFLMKFDLLYFRSKKTKLKKNKNFIWYLRHDD*
Ga0066847_100161403	3300005426	Marine	MKTFRRNFIKTFFLSLPVIFLMKFDLLSFRSKKTKLKKNKNFIWFLRYDD*
Ga0066847_100487321	3300005426	Marine	IHRRSFLKTFFSSLPILFLMKFDLFPSHFTKTKLKKNKNFVWYLNNGD*
Ga0066847_101275052	3300005426	Marine	FIKTFFLSLPVLFLMKFDLLYFRSKKTKLKKNKNFIWYLNSDD*
Ga0066847_102072212	3300005426	Marine	MKIFRRNFIKTFFLSLPVLFLMKFDLLSSRSKKTKLKKNKNFIWYLKYDD*
Ga0066847_102152832	3300005426	Marine	MKIFRRNFIKTFFLPLPFLFLMKFDLLSFRSKKTKLKKNKNFIWYLRHDD*
Ga0066851_101351001	3300005427	Marine	MKIFRRNFIKTFFLSLPVLFLMKFDLLSFRSKKTKLKKNKNFIWYLRHDD*
Ga0066854_100211291	3300005431	Marine	MKIFRRNFIKTFFLPLPVLFLMKFDLLSFRSKKTKLKKNKNFIWYLRHDD*
Ga0066868_101267482	3300005508	Marine	MKIFRRNFIKTFFLPLPFLLLMKFDLLYFRSKKTKLKKNKNFIWYLRHDD*
Ga0066868_101543542	3300005508	Marine	MKKFRRNFIKTFFLSLPVLFLMKFDLLSFRSKKTKLKKNKNFIWYL
Ga0066827_103339352	3300005509	Marine	MKIFRRNFIKTFFLPLPVLFLMKFDLLSFRSKKTKLKKNKNF
Ga0066864_100039666	3300005520	Marine	MKIHRRSFLKTFFSSLPILFLMKFDLFPSHFTKTKLKKNKNFVWYLNNGD*
Ga0066843_100091851	3300005551	Marine	MKKFRRNFIKTFFSSLPVLLLMKFDLLSFRSKKTKLKKNKNF
Ga0066838_100836562	3300005592	Marine	MKKFRRNFLKIFFLSLPVLFLMKLDLLSFRYKKIKLKKNKNFIWYLNDDD*
Ga0066852_100290603	3300005604	Marine	MKIFRRNFIKTFFLSLPVLFLMKFDLLSFRSKKTKLKKNKNFIWYLNESD*
Ga0066381_101129672	3300005945	Marine	MKIKIKVNKFRRNFLKTFFSSLPILFLMKFDLFFSKHNKLKLKKNKNFIWYLNSDD*
Ga0066381_101763782	3300005945	Marine	MKKFRRNFIKTFFLSLPVLFLMKFDLLSFRSKKTKLKKNKNFIWYLRYDD*
Ga0066382_100314282	3300006013	Marine	MKIFRRNFIKTFFLSLPVLFLMKFDLLSFRSKKTKLKKNKNFIWYLNSDD*
Ga0068470_15308472	3300006308	Marine	MKKFRRNFIKTFFLSLPVLFLMKFDLLSFHSKKNKLKKNKNFIWYLRHDD*
Ga0068471_14517831	3300006310	Marine	MKMLRRNFLKTFFSLPPILFFMKFGLFSFHSRKTKLKKNKNFVWYLNNGD*
Ga0068471_16109792	3300006310	Marine	MKIFRRNFIKTFFLSLPVLFLMKFDLLSFHSKKNKLKKNKNFIWYLRHDD*
Ga0068497_13962563	3300006323	Marine	MKIKVKVNKFRRNFLKTFFSSLPILFLMKFDLFFSKHNKLKLKKNKNFIWYLNSDD*
Ga0068483_13405222	3300006330	Marine	MKIEIKVNKFRRNFLKTFFSSLPILFLMKFDLFFSKHNKLKLKKNKNFIWYLNSDD*
Ga0068488_12153562	3300006331	Marine	VNKVRRNFLKTFFSSLPILFLKKFDLFFSKHNKLKLKKNKNFIWYLNEND*
Ga0068480_15453202	3300006335	Marine	MKIKIKVNKFRRNFLKTFFSSLPILFLMKFDLFFFKHNKLKLKKNKNFIWYLNNDD*
Ga0068502_13754712	3300006336	Marine	MKIFRRNFIKTFFLSLPVLFLMKFDLLSYHSKKNKLKKNKNFIWYLRHDD*
Ga0068481_11575892	3300006339	Marine	MRMLRRNFLKIFFSSLPILFLIKFDLFSFPSRKTKLKKNKNFVWYLNNGD*
Ga0068481_12570092	3300006339	Marine	MKIKIKVNKFRRNFVKTFFSSLPILFLMKFDLFFSKHNKLKLKKNKNFIWYLNSDD*
Ga0068481_12986542	3300006339	Marine	MKVFRRNFLKIFFSSLPILFLIKFDLFSFHSKKKKLKKNKNFVWYLNDDD*
Ga0068481_14558292	3300006339	Marine	MKIFRRNFIKTFFLSLPVLFLMKFDLLSFRSKKNKLKKNNNFIWYLKHDD*
Ga0066376_101424202	3300006900	Marine	MKMFRRNFLKTFFSSLPILFLIKFDLFSFHSKKTKLKKNKNFIWYLNHDD*
Ga0066372_102905391	3300006902	Marine	MKTFRRNFIKTFFLSLPVLFLMKFDLLSFHSKKTKLKKNKNFIWYLRHDD*
Ga0066366_102444401	3300007283	Marine	RRNFLKIIFSSLPVLFIIKFNLFPFHLKKIRLKKNKNLIWYLNNDD*
Ga0066367_10922933	3300007291	Marine	MKKFRRNFIKTFFLSLPVLFLMKFDLLSFRSKKTKLKKNKNFIWYLNNGD*
Ga0163108_107100811	3300012950	Seawater	ILHCAYYQMKIHRRSFLKTFFSSLPILFLMKFDLFPSHFTKTKLKKNKNFIWYLNIDD*
Ga0163108_107586212	3300012950	Seawater	FRRNFIKTFFLSLPVLFLMKFDLLSFRSKKTKLKKNKNFIWYLKYDD*
Ga0211537_10005308	3300020262	Marine	MKIFRRNFIKTFFLSLPVLFLMKFDLLSFHSKKNKLKKNKNFIWYLRHDD
Ga0211566_10045873	3300020272	Marine	MKMLRRNFLKIFFSSLPILFLIKFDLFSFPSRKTKLKKNKNFVWYLNNGD
Ga0211566_10083604	3300020272	Marine	MKIFRRNFIKTFFLPLPVLFLMKFDLLSFRSKKTKLKKNKNFVWYLRHDD
Ga0211562_10062715	3300020275	Marine	MKIFRRNFIKTFFLPLPFLLLMKFDLLSFRSKKTKLKKNKNFIWYLRHDD
Ga0211563_10087522	3300020322	Marine	MKIFRRNFIKTFFLPLPVLFLMKFDLLSFRSKKTKLKKNKNFIWYLRHDD
Ga0211573_10026054	3300020327	Marine	MKIFRRNFIKIFFLSFPVLFLMKFDLLSFRSKKTKLKKYKNFVWYLNNND
Ga0211573_10234691	3300020327	Marine	SRLKFILHCAYYQMKIHRRSFLKTFFSSLPILFLMKFDLFPSHFTKTKLKKNKNFVWYLNNGD
Ga0211573_10438113	3300020327	Marine	MKKFRRNFIKTFFLSLPVLFLMKFDLLSFRSKKTKLKKNK
Ga0211573_10522732	3300020327	Marine	MKIFRRNFIKTFFLSLPVLFLMKFDLLYFRSKKTKLKKNKNFIWYLRHDD
Ga0211573_10570382	3300020327	Marine	MKTFRRNFIKTFFLSLPVIFLMKFDLLSFRSKKTKLKKNKNFIWFLRYDD
Ga0211567_10166403	3300020328	Marine	MKKFRRNFIKTFFLSLPVLFLMKFDLLSFRSKKTKLKKNKNFIWYLRHDD
Ga0211572_10023263	3300020330	Marine	MKIHRRSFLKTFFSSLPILFLMKFDLFPSHFTKTKLKKNKNFVWYLNNGD
Ga0211572_10115594	3300020330	Marine	MKKFRRNFIKTFFLSLPVLFLMKFDLLSFRSKKTKLK
Ga0211572_10656621	3300020330	Marine	MKTFRRNFLKIVFLSLPVLYLMKFNLFPFHLKKTKLKKNKNFIWFLRYDD
Ga0211572_11215141	3300020330	Marine	MFRRKFLKTLFLSLAILPYMKLNLFFFGYRKIKLKKNKNFIWY
Ga0211571_10089402	3300020338	Marine	MKIFRRNFIKIFFLSLPVLFLMKFDLFSYRSKKTKLKKNKNFIWYLRYDD
Ga0211571_11068122	3300020338	Marine	MKKFRRNFIKTFFLLLPVLFLMKFDLLSFRSKKTKLKKNK
Ga0211570_10446821	3300020344	Marine	MKTFRRNFIKTFFLSLPVIFLMKFDLLSFRSKKTKL
Ga0211570_10731762	3300020344	Marine	AYYQMKIFRRNFIKIFFLSFPVLFLMKFDLLSFRSKKTKLKKYKNFVWYLNNND
Ga0211608_100347992	3300020354	Marine	MKIFRRNFIKTFFLSLPVLFLMKFDLLSSRSKKTKLKKNKNFIWYLRHDD
Ga0211660_100685771	3300020373	Marine	FRRNFLKMFFLSLPISFLMKFDLFSFHSKKTKLKKNKNFVWYLNYND
Ga0211660_101654492	3300020373	Marine	QMKKFRRNFIKTFFLSLPVLFLMKFDLLSFRSKKTKLKKNKNFIWYLRHDD
Ga0211549_103454422	3300020425	Marine	MKIFRRNFIKTFFLSLPVLFLMKFDLLSFRSKKTKLKKNKNFIWYLRHDD
Ga0211549_103800562	3300020425	Marine	MKIKIKVNKFRRNFLKTFFSSLPILFLMKFDLFFSKHNKLKLKKNKNFIW
Ga0211670_104838261	3300020434	Marine	MKIFRRNFIKTFFLSLPVLFLMKFDLLSFRSKKTKLKKNKNFVWYLNIDD
Ga0211691_101424702	3300020447	Marine	ISRLKFILHCAYYQMKKFRRNFIKTFFLSLPVLFLMKFDLLSFRSKKTKLKKNKNFIWYLRHDD
Ga0187833_100237733	3300022225	Seawater	MKMLRRNFLKIFFSSLPILFLMKFGLFSSYSRKIKLKKNKNFVWYLNNGD
Ga0187833_100466443	3300022225	Seawater	MKIFRRNFIKTFFLSLPVLFLMKFDLLSSRSKKNKLKKNKNFIWYLRHDD
Ga0187833_100848853	3300022225	Seawater	MKTFRRNFLKMIFSSLPVLFIIKFNLFSFHLKKIRLKKNKNLIWYLNNDD
Ga0187833_100962073	3300022225	Seawater	MKKFRRNFLKIFFLSLPVLFLMKLDLLSFRYKKIKLKKNKNFIWYLNDDD
Ga0187833_102358951	3300022225	Seawater	MKIFRRNFIKTFFLSLPVLFLMKFDLLSFRSKKTKLKKNK
Ga0187827_100370951	3300022227	Seawater	MKIFRRNFLKMFFLSLPISFLMKFDLFSFHSKKTKLKKNKNFVWYL
Ga0187827_100458004	3300022227	Seawater	MKKFRRNFIKTFFLSLPVLFLMKFDLLSFRSKKTKLKKNKNFVWYLRHDD
Ga0187827_100819821	3300022227	Seawater	MKIFRRNFIKTFFLSLPVIFLMKFDLLSFRSKKTKLKKNKNFI
Ga0187827_103753772	3300022227	Seawater	MKKFRRNFIKTFFLSLPILFLMKFDLLSFRSKKTKLKKNKNFIWYLRHDD
Ga0187827_106042421	3300022227	Seawater	MFRRNFIKTFFLSLPVLFLMKFDLLSLSSKKTKLKKNKNFIWYLRHDD
Ga0208467_10054803	3300025265	Deep Ocean	MKKFRRNFIKTFFLSLPVLFLMKFDLLSFRSKKTK
Ga0208747_10142502	3300026074	Marine	MKIKIKVNKFRRNFLKTFFSSLPILFLMKFDLFFSKHNKLKLKKNKNFIWYLNSDD
Ga0208113_10365282	3300026087	Marine	MKIFRRNFIKTFFLSLPVLFFMKFDLLSSRSKKTKLKKNKNFIWYLRHDD
Ga0208274_10115904	3300026188	Marine	MKKFRRNFIKTFFLSLPVLFLMKFDLLSFRSKKTKLKKNKNF
Ga0208638_11224381	3300026199	Marine	MKKFRRNFIKTFFLLLPVLFLMKFDLLSFRSKKTKLKKNKNFIWYLR
Ga0208894_10365231	3300026200	Marine	MKKFRRNFIKTFFLLLPVLFLMKFDLLSFRSKKTKLKKNKNFIWYLRHDD
Ga0208406_10965431	3300026205	Marine	MKKFRRNFIKTFFSSLPVLLLMKFDLLSFRSKKTKLKKNKNFIWYLRHDD
Ga0207988_10068461	3300026206	Marine	CAYYQMKIFRRNFIKTFFLSLPVLFLMKFDLLYFRSKKTKLKKNKNFIWYLRHDD
Ga0208640_10474802	3300026208	Marine	MKIFRRNFIKTFFLSLPVLFLMKFDLLSFRSKKTKLKKN
Ga0208642_10211851	3300026210	Marine	MKKFRRNFIKTFFLSLPVLFLMKFDLLSFRSKKTKL
Ga0208642_10400273	3300026210	Marine	FRRNFIKTFFLSLPVLFLMKFDLLSFRSKKTKLKKNKNFVWYLRHDD
Ga0208132_10107482	3300026211	Marine	MKIFRRNFIKTFFLSLPVLFLMKFDLLSSRSKKTKLKKNKNFIWYLKYDD
Ga0208132_10580792	3300026211	Marine	KMLRRNFLKTFFSSLPILFLMKFDLFSFHSRKTKLKKNKNFIWYLNSDD
Ga0208409_10457843	3300026212	Marine	MKTFRRNFIKTFFLSLPVIFLMKFDLLSFRSKKTKLKKNKNF
Ga0208639_10760831	3300026256	Marine	MKIFRRNFLKIFFLSLPISFLMKFDLFSFHLKKSKLKKNKNFVWYL
Ga0208639_10857893	3300026256	Marine	KFRRNFIKTFFLSLPVLFLMKFDLLSFRSKKTKLKKNKNFVWYLRHDD
Ga0208524_10543912	3300026261	Marine	FRRNFIKTFFLSLPVLFLMKFDLLSFRSKKTKLKKNKNFIWYLRHDD
Ga0208765_11027711	3300026265	Marine	MKTFFLSLPVLFLMKFDLLSFRSKKTKLKKNKNFIWYLRHDD
Ga0208278_11452482	3300026267	Marine	RRNFIKTFFLSLPVLFLMKFDLLYFRSKKTKLKKNKNFIWYLRHDD
Ga0208766_11643322	3300026269	Marine	KFRRNFIKTFFLSLPVLFLMKFDLLSFRSKKTKLKKNKNFIWYLRHDD
Ga0209445_12003922	3300027700	Marine	MLRRSFLKTIFSSLPILFLMKFDLFSFHSRKTKLKKNKNFVWYLNNGD
Ga0209035_101836693	3300027827	Marine	MKIFRRNFIKTFFLSLPVLFLMKFDLLSSRSKKTKLKKNKNFIWYL
Ga0257113_10731732	3300028488	Marine	MKKFRRNFIKTFFLSLPVLFLMKFDLLSFRSKKTKLKKNKNFIWYLRYDD
Ga0310122_102877762	3300031800	Marine	MKIFRRNFIKTFFLLLPVLFLMKFDLLSSRSKKTKLKKNKNFIWYLRHDD
Ga0310121_103965052	3300031801	Marine	MKIKIKVNKFRRNFLKTFFSSLPILFLMKFDLFFSKHNKLKLKKNKNFIWYLNSDV
Ga0310121_105965531	3300031801	Marine	MKIFRRNFIKTFFLSLPVLFLMKFDLLSSRSKKTKLKKNKNFIWYLR
Ga0310124_103598562	3300031804	Marine	MFRRKFLKTLFLSLPILSYMKFNLFFFGHKKIKLKKNKNFIWYLNIE
Ga0310124_108341201	3300031804	Marine	MKIKIKVNKFRRNFLKTFFSSLPILFLMKFDLFFSKQNKLKLKKNKNFIWYLNSDD
Ga0315319_105356332	3300031861	Seawater	MKIPRRSFLKILFSSLPILFLMKFDLFSFYSRKTKLK
Ga0315336_11032852	3300032132	Seawater	MKIKIKVNKFRRNFLKTFFSSLPILFLMKVDLFFFKHNKLKLKKNKNFIWYLNSDD
Ga0310345_107306661	3300032278	Seawater	MKKFRRNFLKIVFSSLPIIFFMKFNLFSFHPKKTKLKKNKNFIWYLNSDD
Ga0310345_112157202	3300032278	Seawater	MKKFRRNFIKTFFLSLPVLFLMKFDLLSFRSKKTKLKKNKNFIWYLKHDD
Ga0310342_1012688751	3300032820	Seawater	IFRRNFIKTFFLLLPVLFLMKFDLLSFRSKKTKLKKNKNFIWYLRHDD
Ga0310342_1032548182	3300032820	Seawater	KMLRRNFLKTFFSLLPILFFMKFGLFSFHSKKTKLKKNKNFVWYLNNGD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F071316

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences