Metagenome Family F071109

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F071109
Family Type	Metagenome
Number of Sequences	122
Average Sequence Length	71 residues
Representative Sequence	MTEAQILQCAPAPAAHAGTSTVPGGRGRRGRRLGTRLWSLLHAPALLAGGVGGPGDVTHIEDDRVRLARRQAR
Number of Associated Samples	84
Number of Associated Scaffolds	122

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	80.33 %
% of genes near scaffold ends (potentially truncated)	38.52 %
% of genes from short scaffolds (< 2000 bps)	86.89 %
Associated GOLD sequencing projects	78
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.24

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (53.279 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (39.344 % of family members)
Environment Ontology (ENVO)	Unclassified (44.262 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (49.180 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 35.64% β-sheet: 0.00% Coil/Unstructured: 64.36%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.24
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.24
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 122 Family Scaffolds
PF13424	TPR_12	36.89
PF07681	DoxX	25.41
PF00248	Aldo_ket_red	1.64
PF12681	Glyoxalase_2	1.64
PF00561	Abhydrolase_1	1.64
PF12697	Abhydrolase_6	0.82
PF00196	GerE	0.82
PF14016	DUF4232	0.82
PF13560	HTH_31	0.82
PF02518	HATPase_c	0.82

COG ID	Name	Functional Category	% Frequency in 122 Family Scaffolds
COG2259	Uncharacterized membrane protein YphA, DoxX/SURF4 family	Function unknown [S]	25.41
COG4270	Uncharacterized membrane protein	Function unknown [S]	25.41

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.28 %
All Organisms	root	All Organisms	46.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.28 %
cellular organisms	root	All Organisms → cellular organisms	46.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.28 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	46.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.28 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	45.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.28 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	45.08 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.28 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	34.43 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.28 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	5.74 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	1.64 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.28 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	5.74 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1.64 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.28 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	5.74 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1.64 %
Nocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia	0.82 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000956\|JGI10216J12902_101781611	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1216	Open in IMG/M
3300000956\|JGI10216J12902_104681978	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1367	Open in IMG/M
3300004268\|Ga0066398_10009846	All Organisms → cellular organisms → Bacteria	1373	Open in IMG/M
3300004633\|Ga0066395_10014621	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2994	Open in IMG/M
3300004633\|Ga0066395_10086204	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1483	Open in IMG/M
3300005332\|Ga0066388_100039346	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4640	Open in IMG/M
3300005332\|Ga0066388_100135336	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	3018	Open in IMG/M
3300005332\|Ga0066388_100442316	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1942	Open in IMG/M
3300005332\|Ga0066388_100466065	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1903	Open in IMG/M
3300005332\|Ga0066388_100521003	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1822	Open in IMG/M
3300005332\|Ga0066388_100587114	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1739	Open in IMG/M
3300005332\|Ga0066388_101291237	Not Available	1257	Open in IMG/M
3300005332\|Ga0066388_103006984	Not Available	862	Open in IMG/M
3300005332\|Ga0066388_103484174	Not Available	803	Open in IMG/M
3300005332\|Ga0066388_105305687	Not Available	654	Open in IMG/M
3300005332\|Ga0066388_108821487	Not Available	500	Open in IMG/M
3300005435\|Ga0070714_100477479	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1187	Open in IMG/M
3300005436\|Ga0070713_101587440	Not Available	635	Open in IMG/M
3300005436\|Ga0070713_102194850	Not Available	535	Open in IMG/M
3300005439\|Ga0070711_100239128	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1419	Open in IMG/M
3300005445\|Ga0070708_100349340	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1394	Open in IMG/M
3300005467\|Ga0070706_100002448	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	18717	Open in IMG/M
3300005468\|Ga0070707_101552285	Not Available	629	Open in IMG/M
3300005764\|Ga0066903_100053202	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4960	Open in IMG/M
3300005764\|Ga0066903_100130302	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3534	Open in IMG/M
3300005764\|Ga0066903_100459027	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2134	Open in IMG/M
3300005764\|Ga0066903_102170650	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1070	Open in IMG/M
3300005764\|Ga0066903_102424618	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1015	Open in IMG/M
3300005764\|Ga0066903_102555917	Not Available	989	Open in IMG/M
3300005764\|Ga0066903_108181928	Not Available	535	Open in IMG/M
3300006755\|Ga0079222_10333119	Not Available	1013	Open in IMG/M
3300006755\|Ga0079222_11950050	Not Available	575	Open in IMG/M
3300006804\|Ga0079221_10238303	Not Available	1025	Open in IMG/M
3300006806\|Ga0079220_10933116	Not Available	678	Open in IMG/M
3300006904\|Ga0075424_101469364	Not Available	724	Open in IMG/M
3300006914\|Ga0075436_100086297	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2180	Open in IMG/M
3300009792\|Ga0126374_11289993	Not Available	589	Open in IMG/M
3300010046\|Ga0126384_10015721	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4800	Open in IMG/M
3300010048\|Ga0126373_10556329	Not Available	1195	Open in IMG/M
3300010048\|Ga0126373_10993971	Not Available	904	Open in IMG/M
3300010358\|Ga0126370_10086649	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2123	Open in IMG/M
3300010358\|Ga0126370_10502457	Not Available	1025	Open in IMG/M
3300010358\|Ga0126370_11587944	Not Available	625	Open in IMG/M
3300010360\|Ga0126372_10831634	Not Available	918	Open in IMG/M
3300010361\|Ga0126378_10557595	Not Available	1260	Open in IMG/M
3300010366\|Ga0126379_10242031	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1770	Open in IMG/M
3300010366\|Ga0126379_10482034	Not Available	1308	Open in IMG/M
3300010366\|Ga0126379_10497377	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1290	Open in IMG/M
3300010376\|Ga0126381_104559447	Not Available	534	Open in IMG/M
3300010398\|Ga0126383_10261695	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia	1704	Open in IMG/M
3300010398\|Ga0126383_11872227	Not Available	688	Open in IMG/M
3300012199\|Ga0137383_10230198	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1358	Open in IMG/M
3300012948\|Ga0126375_10487927	Not Available	915	Open in IMG/M
3300012971\|Ga0126369_11015413	Not Available	917	Open in IMG/M
3300015372\|Ga0132256_102969315	Not Available	570	Open in IMG/M
3300015374\|Ga0132255_105577375	Not Available	532	Open in IMG/M
3300016294\|Ga0182041_10737903	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	876	Open in IMG/M
3300016319\|Ga0182033_11009783	Not Available	740	Open in IMG/M
3300016341\|Ga0182035_11160686	Not Available	689	Open in IMG/M
3300016357\|Ga0182032_10946553	Not Available	734	Open in IMG/M
3300016371\|Ga0182034_11132226	Not Available	679	Open in IMG/M
3300017974\|Ga0187777_11254388	Not Available	543	Open in IMG/M
3300021478\|Ga0210402_10214570	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1771	Open in IMG/M
3300021560\|Ga0126371_11177102	Not Available	904	Open in IMG/M
3300021560\|Ga0126371_11770253	Not Available	740	Open in IMG/M
3300021560\|Ga0126371_13305225	Not Available	545	Open in IMG/M
3300025910\|Ga0207684_10033903	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4342	Open in IMG/M
3300025915\|Ga0207693_10893623	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	682	Open in IMG/M
3300025916\|Ga0207663_10625583	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	848	Open in IMG/M
3300026498\|Ga0257156_1031735	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1070	Open in IMG/M
3300027787\|Ga0209074_10073633	Not Available	1100	Open in IMG/M
3300027874\|Ga0209465_10004784	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5889	Open in IMG/M
3300031543\|Ga0318516_10238170	Not Available	1052	Open in IMG/M
3300031543\|Ga0318516_10264385	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	995	Open in IMG/M
3300031543\|Ga0318516_10415216	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	775	Open in IMG/M
3300031544\|Ga0318534_10021136	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	3458	Open in IMG/M
3300031544\|Ga0318534_10128629	Not Available	1457	Open in IMG/M
3300031545\|Ga0318541_10264729	Not Available	956	Open in IMG/M
3300031549\|Ga0318571_10244506	Not Available	657	Open in IMG/M
3300031561\|Ga0318528_10643389	Not Available	568	Open in IMG/M
3300031564\|Ga0318573_10041516	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2207	Open in IMG/M
3300031572\|Ga0318515_10715714	Not Available	529	Open in IMG/M
3300031640\|Ga0318555_10091373	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1596	Open in IMG/M
3300031640\|Ga0318555_10756208	Not Available	525	Open in IMG/M
3300031679\|Ga0318561_10369094	Not Available	787	Open in IMG/M
3300031681\|Ga0318572_10394797	Not Available	822	Open in IMG/M
3300031682\|Ga0318560_10776339	Not Available	517	Open in IMG/M
3300031723\|Ga0318493_10150083	Not Available	1205	Open in IMG/M
3300031724\|Ga0318500_10248805	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	862	Open in IMG/M
3300031744\|Ga0306918_10730322	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	775	Open in IMG/M
3300031751\|Ga0318494_10166415	Not Available	1247	Open in IMG/M
3300031751\|Ga0318494_10225131	Not Available	1072	Open in IMG/M
3300031751\|Ga0318494_10284144	Not Available	952	Open in IMG/M
3300031764\|Ga0318535_10277399	Not Available	750	Open in IMG/M
3300031765\|Ga0318554_10201072	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1134	Open in IMG/M
3300031770\|Ga0318521_10115608	Not Available	1494	Open in IMG/M
3300031778\|Ga0318498_10156290	Not Available	1038	Open in IMG/M
3300031779\|Ga0318566_10136645	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1213	Open in IMG/M
3300031793\|Ga0318548_10361683	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	712	Open in IMG/M
3300031795\|Ga0318557_10043162	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1876	Open in IMG/M
3300031797\|Ga0318550_10244548	Not Available	870	Open in IMG/M
3300031799\|Ga0318565_10144914	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1151	Open in IMG/M
3300031821\|Ga0318567_10168035	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1217	Open in IMG/M
3300031831\|Ga0318564_10466576	Not Available	549	Open in IMG/M
3300031846\|Ga0318512_10102865	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1344	Open in IMG/M
3300031879\|Ga0306919_10293006	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1233	Open in IMG/M
3300031894\|Ga0318522_10272947	Not Available	641	Open in IMG/M
3300031896\|Ga0318551_10672919	Not Available	599	Open in IMG/M
3300031910\|Ga0306923_11301658	Not Available	771	Open in IMG/M
3300032008\|Ga0318562_10019756	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3483	Open in IMG/M
3300032008\|Ga0318562_10181014	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1219	Open in IMG/M
3300032008\|Ga0318562_10232924	Not Available	1068	Open in IMG/M
3300032009\|Ga0318563_10436684	Not Available	708	Open in IMG/M
3300032043\|Ga0318556_10024540	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2739	Open in IMG/M
3300032052\|Ga0318506_10369493	Not Available	636	Open in IMG/M
3300032054\|Ga0318570_10222516	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	854	Open in IMG/M
3300032054\|Ga0318570_10453102	Not Available	585	Open in IMG/M
3300032064\|Ga0318510_10403626	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	582	Open in IMG/M
3300032066\|Ga0318514_10165630	Not Available	1150	Open in IMG/M
3300032205\|Ga0307472_100423255	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1122	Open in IMG/M
3300033289\|Ga0310914_10300192	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1448	Open in IMG/M
3300033289\|Ga0310914_11082834	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	702	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.72%
Host-Associated	Host-Associated	3.28%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	96.72%
Plants	Host-Associated → Plants	3.28%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	96.72%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.46%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.82%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	69.67%
Loam	Environmental → Terrestrial → Soil → Loam	26.23%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.64%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.82%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.82%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.82%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	46.72%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	18.03%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.21%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.20%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.10%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.64%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.64%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.82%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.82%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.82%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	39.34%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	18.03%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	16.39%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.56%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	4.10%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.64%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.64%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.82%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.82%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.82%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.82%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.82%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.82%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004268	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026498	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-49-A	Environmental	Open in IMG/M
3300027787	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10216J12902_1017816113	3300000956	Soil	MTEAQILQCTPVRAAHAQASPPAGRGRRLGTRLWSLWHAPALLAGGMGGSGDVTLIEDDRGR
JGI10216J12902_1046819782	3300000956	Soil	MTETQILQCAPAPTAHAGTSTVPGGRGRRSRRLGTRLWSLLHAPALLAGSVGGPGDVAQIEDDRMRLAHRQAR*
Ga0066398_100098461	3300004268	Tropical Forest Soil	MTETPILECAPVREAPAPTSTPRGRARRGRPSRRLGTRLWTLLRAPALLDGGVGVPGDVALIEDDRGRLAGRQAR*
Ga0066395_100146212	3300004633	Tropical Forest Soil	MTEAQILQCAPAPAAQARTSTVPGGRGRRGRRLGTRLWTLLHAPALLAGGVGGPGDVARIEDDRVRLAHRQAR*
Ga0066395_100862043	3300004633	Tropical Forest Soil	MTETPILECAPVREAPAPTSTPRGRVRRVRPSRRLGTRLWTLLRAPALLDGGVGVPGDVALIEDDRGRLAGRQAR*
Ga0066388_1000393465	3300005332	Tropical Forest Soil	MTEAQILPCAPACTAHAQASTPNGRGRRGHRLGTRLWSLLHAPALLAGGVGGPGDVAFIEDDRGRLAHRQAR*
Ga0066388_1001353363	3300005332	Tropical Forest Soil	MTEAQILQCTPVRTTHAQASPPAGRGRRLGTRLWSLLHAPALLAGSVGGPGDVALIEDDRRRLAHRQAR*
Ga0066388_1004423163	3300005332	Tropical Forest Soil	MTEAQILQCAPAPAAHAGTSTVPGGRGRRGRRLGTRLWSLLHAPALLAGGVGGPGDVTHIEDDRVRLARRQAR*
Ga0066388_1004660652	3300005332	Tropical Forest Soil	MTEAQLLQCAPVPAAHAQASAPGHRGRRALRLGTRLWTLLHAPALLAGSVRGPGDVALIEDDRGRLAHRQQR*
Ga0066388_1005210033	3300005332	Tropical Forest Soil	MTETPILECAPVREAPAPTSTPRGRVRRGRPSRRLGTRLWTLLRAPALLDGGVGVPGDVALIEDDRGRLAGRQAR*
Ga0066388_1005871142	3300005332	Tropical Forest Soil	MTEAQILQCAPVQAAHAQAPAPGDRSRRSRRLGTRLWSLLHAPALLTGNVGGPGDVALIEDDRGRLAHRQAR*
Ga0066388_1012912371	3300005332	Tropical Forest Soil	MTQAQILQCAPAPAHAGTSTVPGDRGRRSRRLGTRLWSLLHAPALLAGGVGSPGAVTHIEDDRARLAHRQAR*
Ga0066388_1030069841	3300005332	Tropical Forest Soil	MTETQILECAPVRAAYAQASAPGGRGRRGRRLGTRLWSLLHAPALLDGAVGGPCDVALIEDDRGRLAGRQAR*
Ga0066388_1034841742	3300005332	Tropical Forest Soil	MTEAQVWQCAPVPAAHAQASTPGHRGGRGRRLGTRLWSLLHAPALLTGGVSGPGDVALIEDDRGRLAGRRAR*
Ga0066388_1053056871	3300005332	Tropical Forest Soil	MTETQILECAPARAAYAQASAPGHRGRRGRRLGTRLWSLLHARALLDGAVGGPCDVALIEDDR
Ga0066388_1088214871	3300005332	Tropical Forest Soil	MTEVQIVQCAPSPAAHAGTSTVPGGRGRRSRRLGTRLWSLLHAPALLAGSVGGPGDAAFIEDDRARLAHRQER*
Ga0070714_1004774791	3300005435	Agricultural Soil	MTEAQILQCAPAPAAHAGKSTAPGGRGRRLGTRLWSLLHAPALLAGGVGGPGDVALIEDDRRRLAHRQAR*
Ga0070713_1015874402	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	VRAAHAQASTPSDRGRRGRRLGTRLWSLLHAQALLNGGAGGPGHVALIEDDRVRLAHRQAR*
Ga0070713_1021948501	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	RRKARTMTEAQILQCAPAPAAHAGTSRVPRGRGRRSRRLGTRLWSLLHAPALLAGGVSGPGDVTYMEDDRVRLAHRQAR*
Ga0070711_1002391282	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MTEAQILQCAPAPAAHAGKSTAPGGRGRRLGTRLWSLLHAPALLAGGVGAPGDVALIEDDRRRLAHRQAR*
Ga0070708_1003493402	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MTEAQILQCAPAPAAHAGTSTVPRGRGRRSRRLGTRLWSLLHAPALLAGGVSGPGDVTYMEDDRVRLAHRQAR*
Ga0070706_1000024483	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MTEAQILQCTTVPAAHAQASTPSDRGRRGRRLGTRLWSLLHAQALLNGGAGGPGHVALIEDDRVRLAHRQAR*
Ga0070707_1015522851	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MTEAQILQCAPAPAAHAGTSTVPRGRGRRSRRLGTRLWSLLHAPALLAGGVSGPGDVTYVEDDRVRLAHRQAR*
Ga0066903_1000532026	3300005764	Tropical Forest Soil	MTEAQILQCAPAPTAHAGTSTVPRGRGRRSRRLGTRLWSLLHAPALLAGGVGGPGDVAHIEDDRVRLARRQAR*
Ga0066903_1001303022	3300005764	Tropical Forest Soil	MTEAQILQCAPAPAAQAGTSTVPGRRGRRSRRLGTRLWSLLHAPALLAGAVGGPGDVTRIEDDRARLAHRQAR*
Ga0066903_1004590272	3300005764	Tropical Forest Soil	MTEAQILQCAPVQAAHAQAPAPGDRSRRSRRLGTRLWSLLHAPALLAGNVGGPGDVALIEDDRGRLAHRQAR*
Ga0066903_1021706503	3300005764	Tropical Forest Soil	MTETQILECAPVRAAYAQASAPGHRGRRGRRLGTRLWSLLHAPALLAGAVGGPCDVALIEDDRGRLAGRQAR*
Ga0066903_1024246182	3300005764	Tropical Forest Soil	MTEAQILQCTPVRTTHAQASPPAGRGRRLGTRLWSLLHAPALLAGGVGGPGDVALIEDDRGRLAHRQAR*
Ga0066903_1025559171	3300005764	Tropical Forest Soil	MTEAQILQCAPAPATQARTSTVPGGRGRRGRRLGTRLWTLLHAPALLAGGVGGPGDVAGIEDDRVRLAHRPAR*
Ga0066903_1081819281	3300005764	Tropical Forest Soil	MTEAQIWQCPPAPAAQARTSAVPGGRGRRGRRLGTRLWTLLHAPALLAGGVGGPGDVARIEDDRVRLAR
Ga0079222_103331192	3300006755	Agricultural Soil	MTEAQILQCAPAPAAHAGKSTAPGGRGRRLGTRLWSLLHAPALLAGSVGGPGDIAYIEDDRVRLAHRQAQ*
Ga0079222_119500501	3300006755	Agricultural Soil	MTEAQILQCAPAPAADARTSMVPGGRGRRSRRLGTRLWSLLHASALLAGSVGGPGDVAHIEDDRVRLARRQAR*
Ga0079221_102383032	3300006804	Agricultural Soil	MTEAQILQCAPAPAADATTSMVPGGRGRRSRRLGTRLWSLLHASALLAGSVGGPGDVAHIEDDRVRLARRQAR*
Ga0079220_109331161	3300006806	Agricultural Soil	MTEAQILQCAPAAAADVRTSTVPGGRARRSRRLGTRLWSLLHAPALLAGSVGGPGDVAHVEDDR
Ga0075424_1014693641	3300006904	Populus Rhizosphere	AAHAGTSTVPRGRGRRSRRLGTRLWSLLHAPALLAGGVSGPGDVTYMEDDRVRLAHRQAR
Ga0075436_1000862972	3300006914	Populus Rhizosphere	MTEAQILQCTPAPAADARTSMVPGGRGRRSRRLGTRLWSLLHASALLAGSVGGPGDVAHIEDDRVRLARRQAR*
Ga0126374_112899931	3300009792	Tropical Forest Soil	MTEAHISQYPSMRLAHDYASTATSGRGGRGRRLGARLWTLLHAPALLAGGVGGPGDVALIEDDRTRLAGRQAR*
Ga0126384_100157212	3300010046	Tropical Forest Soil	MTEAQVLQCAPVPAAHAQASTPGHCGGRGRRLGTRLWSLLHAPALLTGGVSGPGDVALIEDDRGRLAGRQAR*
Ga0126373_105563291	3300010048	Tropical Forest Soil	MTETQILQPAPAPAAHAGASTVPGGRGRRSRRLGTRLWSLLHAPALLAGGVGGPGDVTHIEDDRVRLARRQAR*
Ga0126373_109939712	3300010048	Tropical Forest Soil	PAPAAHAGTSTAPGGRGRRSRRLGTRLWSLLHAPALLAGGVGGPGDVTHIEDDRVRLARRQAR*
Ga0126370_100866494	3300010358	Tropical Forest Soil	MTEAQILQCAPAPTAHAGTSTVPRGRGRRSRRLGTRLWSLLHAPALLAGGVGGPGDVAHTAGQQGR
Ga0126370_105024572	3300010358	Tropical Forest Soil	MTQAQILQCAPAPAHAGTSTVPGDRGRRSRRLGTRLWSLLHAPALLAGGVGGPGDVTHIEDDRVRLARRQAR*
Ga0126370_115879442	3300010358	Tropical Forest Soil	MTETQILECAPVRAAYAQASAPGGRGRRGRRLGTRLWSLLHAPALLAGAVGGPCDVALIEDDRGRLAGRQAR*
Ga0126372_108316341	3300010360	Tropical Forest Soil	MTEAQILQCAPVQAAHAQAPAPGDRSRRSRRLGTRLWSLLHAPALLTGGVSGPGDVALIEDDRGRLAGRRAR*
Ga0126378_105575952	3300010361	Tropical Forest Soil	VLLATLESAEKRRKARTMTEVQILQSAPAPAAHAETSTVPGGRGRRSRRLGTRLWTLLHAPALLAGGVSGPSDVTHIEDDRVRLARRQAR*
Ga0126379_102420312	3300010366	Tropical Forest Soil	AQILQCTPVRTTHAQASPPTGRGRRLGTRLWSLLHAPALLAGGVGGPGDVAHIEDDRVRLARRQAR*
Ga0126379_104820341	3300010366	Tropical Forest Soil	MTETQILECAPVRAAHAQAPALGHRGRRGRRLGTRLWSLLHARALLAGTVGGPCDVVLIEDDRGRLAGRQAR*
Ga0126379_104973772	3300010366	Tropical Forest Soil	MTEAQILQCAPAPAAQARTSTVPGGRGRRGHRLGTRLWTLLHAPALLAGGVGGPGDVARIEDDRMRLAHRQAR*
Ga0126381_1045594472	3300010376	Tropical Forest Soil	MTETQILQCAPAPAAHAGASTVPGGRGRRSRRLGTRLWSLLHAPALLAGGVGGPGDVTHIEDDRVRLARRQAR*
Ga0126383_102616952	3300010398	Tropical Forest Soil	MTEAQVLQCAPVPAGHAQASTPGHRGGRGRRLGTRLWSLLHAPALLTGGVSGPDDVTLIEDDRGRLAGRQAR*
Ga0126383_118722272	3300010398	Tropical Forest Soil	MTETQILECAPVRAAHAQAPALGHRGRRGRRLGTRLWSLLHARALLAGTVGGPCDVALIEDDRSRLAGRQAR*
Ga0137383_102301982	3300012199	Vadose Zone Soil	MTEAQILQCTTVRAAHAQASTPSDRGRRGRRLGTRLWSLLHAQALLNGGAGGPGHVALIEDDRVRLAHRQAR*
Ga0126375_104879272	3300012948	Tropical Forest Soil	MTEAQVLQCAPVPAAHAQASTPGHRSGRGRRLGTRLWSLLHAPALLTGGVSGPDDCALIEDDRGRLAGRQAR*
Ga0126369_110154131	3300012971	Tropical Forest Soil	TMTEAQILQCAPAPATQARTSTVPGGRGRRGRRLGTRLWTLLHAPALLAGGVGGPGDVAGIEDDRVRLAHRPAR*
Ga0132256_1029693152	3300015372	Arabidopsis Rhizosphere	MTEAQVLECVPTPAAHAGTSTAPGAHGRRGRRLGTRLWSLLHAPALLAGAAAGPGDVTHIEDDRVRLGRRQAR*
Ga0132255_1055773751	3300015374	Arabidopsis Rhizosphere	MTEAQILECVPTPAAHAGTSTAPGAHGRRGRRLGTRLWSLLHAPALLAGAAAGPGDVTHIEDDRVRLGRRQAR*
Ga0182041_107379032	3300016294	Soil	MTEAQILQRAPAPAAQAGTSTVPGGRGRRSRRLGTRLWSLLHAPALLAGGVSGPGDVTYIEDDRVRLARRQAR
Ga0182033_110097832	3300016319	Soil	MTEILECAPAPKAHAGTSTVPGGRGRRSRRLGTRLWTLLHAPALLAGGVGGPGDVAHLEDDRVRLAHRQVR
Ga0182035_111606862	3300016341	Soil	MTEVQIVQCAPAPAAHSGTSTVPGGRGRRSRRLGTRLWSLLHAPALLAGGVSGAGDVTYIEDDRVRLAHRQAR
Ga0182032_109465532	3300016357	Soil	MTEVEILQCAPARAAHVETSTVPGGRGRRGRRLGTRLWSLLHAPALLAGGVSGPGDVTYIEDDRVRLAHRQAR
Ga0182034_111322261	3300016371	Soil	MTEAQILQCAPAPAAQARTSTVPGGGGRRGRRLGTRLWALLHAPALLAGGVGGPGDVARIEDDRVRLAHRQAR
Ga0187777_112543882	3300017974	Tropical Peatland	MTEAQILQCTPVQAAHAQASPRSGRGRRLGTRLWSLLHAQALLAGRVGGPGDVALIEDDRVRLAHRQAQ
Ga0210402_102145702	3300021478	Soil	MTEAQILQCTTVRAAHAQASTPSDRGRRGRRLGTRLWSLLHAQALLNGGAGGPGHVALIEDDRVRLAHRQAR
Ga0126371_111771021	3300021560	Tropical Forest Soil	EAQILQCAPAPTAHAGTSTVPRGRGRRSRRLGTRLWSLLHAPALLAGGVGGPGDVAHIEDDRVRLARRQAR
Ga0126371_117702531	3300021560	Tropical Forest Soil	MTEAQILQCAPAPAAQARTSTVPGGRGRRGHRLGTRLWTLLHAPALLAGGVGGPGDVARIEDDRVRLAHRQAR
Ga0126371_133052251	3300021560	Tropical Forest Soil	MTEVQILQCAPSPAAHAGTSTVPGGRGRRSRRLGTRLWSLLHAPALLAGSVGGPGDAAFIEDD
Ga0207684_100339036	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MTEAQILQCTTVPAAHAQASTPSDRGRRGRRLGTRLWSLLHAQALLNGGAGGPGHVALIEDDRVRLAHRQAR
Ga0207693_108936231	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MTEAQILQCAPAPAAHAGKSTAPGGRGRRLGTRLWSLLHAPALLAGGVGAPGDVALIEDDRR
Ga0207663_106255832	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	VGRYVWSWPVLLATLESAEKRRKARTMTEAQILQCAPAPAAHAGKSTAPGGRGRRLGTRLWSLLHAPALLAGGVGAPGDVALIEDDRRRLAHRQAR
Ga0257156_10317352	3300026498	Soil	MTEAQILQCTTVRAAHAQASTPSDRGRRGRRLGIRLWSLLHAQALLNGGAGGPGHVALIEDDRVRLAHRQAR
Ga0209074_100736331	3300027787	Agricultural Soil	LATLESAEKRRKARTMTEAQILQCAPAPAAHAGKSTAPGGRGRRLGTRLWSLLHAPALLAGSVGGPGDIAYIEDDRVRLAHRQAQ
Ga0209465_100047842	3300027874	Tropical Forest Soil	MTEAQILQCAPAPTAHAGTSTVPRGRGRRSRRLGTRLWSLLHAPALLAGGVGGPGDVAHIEDDRVRLAHRQAR
Ga0318516_102381702	3300031543	Soil	MTEAQIVQRAPAPAAQAGTSTVPGGRGRRSRRLGTRLWSLLHAPALLAGGVSGPGDVTYIEDDRVRLAHRQAR
Ga0318516_102643852	3300031543	Soil	MTEAQTLQCAPAPAAHAGTSTVPGGRGRRGRRLGTRLWTLLHAPALLAGGVGGPGDVAHLEDDRVRLAHRQVR
Ga0318516_104152162	3300031543	Soil	MTEVEILQCAPARAAHVETSTVPGGRGRRGRRLGTRLWTLLHAPALLAGDVGGPGDVAFIEDD
Ga0318534_100211363	3300031544	Soil	MTEAQILQRAPAPAAQAGTSTVPGGRGRRSRRLGTRLWSLLHAPALLAGGVSGPGDVTYIEDDRVRLAHRQAR
Ga0318534_101286291	3300031544	Soil	MTETQILQCAPAPAAHAGASTVPSGRGRRSRRLGTRLWSLLHAPALLAGGVGGPGDVTHIEDDRVRLARRQAR
Ga0318541_102647291	3300031545	Soil	TMTEAQILQCAPAPAAQARTSTVPGGGGRRGRRLGTRLWALLHAPALLAGGVGGPGDVARIEDDRVRLAHRQAR
Ga0318571_102445062	3300031549	Soil	MTEVEILQCAPARAAHVETSTVPGGRGRRGRRLGTRLWTLLHAPALLAGDVGGPGDVAFIEDDRVRLARRRAR
Ga0318528_106433891	3300031561	Soil	MTEAQILQCAPAPAAQARTSTVPGGGGRRGRRLGTRLWALLHAPALLAGGVGGPGDVARIEDDRVRLAHRQVR
Ga0318573_100415162	3300031564	Soil	MTEAQTLQCAPAPAAHAGTSTVPGGRGRRGRRLGTRLWTLLHAPALLAGGVGGPGVVAHLEDDRVRLAHRQVR
Ga0318515_107157142	3300031572	Soil	MTEAQILQCAPAPAAQARTSTVPGGRGRRGRRLGTRLWTLLHAPALLAGGVGGPGDVARIEDDRVRLAHRQAR
Ga0318555_100913732	3300031640	Soil	MTEAQTLQCAPAPAAHAGTSTVPGGRGRRGRRLGTRLWTLLHAPALLAGGVGGPGDVAHLEDDRVRLAHRQAR
Ga0318555_107562082	3300031640	Soil	MTEVEILQCAPARAAHVETSTVPGGRGRRGRRLGTRLWTLLHAPALLAGGMGGPGDVAFIDDDRVRLARRR
Ga0318561_103690942	3300031679	Soil	ILQRAPAPAAQAGTSTVPGGRGRRSRRLGTRLWSLLHAPALLAGGVSGPGDVTYIEDDRVRLAHRQAR
Ga0318572_103947972	3300031681	Soil	MTEVEILQCAPARAAHVETSTVPGGRGRRGRRLGTRLWTLLHAPALLAGGMGGPGDVAFIEDDRVRLARRRAR
Ga0318560_107763391	3300031682	Soil	MTEAQILQCAPAPADHAGTSTVPGGRGRRSRRLGTRLWSLLHAPALLAGGVSGPGDVTYIEDDRVRLAHRQA
Ga0318493_101500831	3300031723	Soil	ILQCAPAPAAHAGASTVPSGRGRRSRRLGTRLWSLLHAPALLAGGVGGPGDVTHIEDDRVRLARRQAR
Ga0318500_102488052	3300031724	Soil	MTEAQTLQCAPAPAAHAGTSTVPGGRGRRGRRLGTRLWTLLHAPALLAGGVGGPGDVAHREDDRVRLAHRQVR
Ga0306918_107303222	3300031744	Soil	MTEVEILQCAPARAAHVETSTVPGGRGRRGRRLGTRLWTLLHAPALLAGGMGGPGDVAFIED
Ga0318494_101664152	3300031751	Soil	DILQCAPARAAHVETSTVPGGRGRRGRRLGTRLWTLLHAPALLAGDVGGPGDVAFIEDDRVRLARRRAR
Ga0318494_102251312	3300031751	Soil	PAAHAGTSTVPGGRGRRGRRLGTRLWTLLHAPALLAGGVGGPGDVAHFEDDRVRLAHRQA
Ga0318494_102841441	3300031751	Soil	TMTEAQILQCAPAPAAQARTSTVPGGGGRRGRRLGTRLWALLHAPALLAGGVGGPGDVARIEDDRVRLARRQAR
Ga0318535_102773992	3300031764	Soil	MTEAQILQCAPAAADHAGTSTVPGGRGRRSRRLGTRLWSLLHAPALLAGGVSGPGDVTYIEDDRVRLARRQAR
Ga0318554_102010722	3300031765	Soil	MTEAQILQCAPAPATHAGTSRVPGGRGRRSHRLGTRLWSLLHAPALLAGGVGGPGDVARIEDDRVRLARR
Ga0318521_101156082	3300031770	Soil	TITEAQTLQCAPAPAAHAGTSTVPGGRGRRGRRLGTRLWTLLHAPALLAGGVGGPGDVAHLEDDRVRLAHRQAR
Ga0318498_101562902	3300031778	Soil	MTETQILQCAPAPAAHAGASTVPSGRGRRSRRLGTRLWSLRHAPALLAGGVGGPGDVTHIEDDRVRLARRQAR
Ga0318566_101366453	3300031779	Soil	MTEAQTLQCAPAPAAHAGTSTVPGGRGRRGRRLGTRLWTLLHAPALLAGGVGGPGDVAHFEDD
Ga0318548_103616831	3300031793	Soil	MTEAQILQCAPAPAAQARTSTVPGGRGRRGRRLGTRLWTLLHAPALLAGGVGGPGDVARIED
Ga0318557_100431622	3300031795	Soil	MTEAQILQCAPAPAAQARTSTVPGGRGRRGRRLGTRLWTLLHAPALLAGGVGGPGDVAHLEDDRVRLAHRQAR
Ga0318550_102445482	3300031797	Soil	LQCAPAPAAHAGTSTVPGGRGRRGRRLGTRLWTLLHAPALLAGGVGGPGDVAHFEDDRVRLAHRQAR
Ga0318565_101449141	3300031799	Soil	MTEVEILQCAPARAAHVETSTVPGGRGRRGRRLGTRLWTLLHAPALLAGDVGGPGDVAFIEDDRVRLA
Ga0318567_101680353	3300031821	Soil	MTEAQTLQCAPAPAAHAGTSTVPGGRGRRGRRLGTRLWTLLHAPALLAGGVGGPGDVAHLEDDRV
Ga0318564_104665761	3300031831	Soil	MTEVEILQCAPARAAHVETSTVPGGRGRRGRRLGTRLWTLLHAPALLAGDVGGPGDVAFIEDDRVRLARR
Ga0318512_101028651	3300031846	Soil	MTETQILQCAPAPAAHAGASTVPSGRGRRSRRLGTRLWSLLHAPALLAGGVGGPGDVTHIEDDRVRLA
Ga0306919_102930063	3300031879	Soil	MTEAQILQCAPAPAAQARTSTVPGGGGRRGRRLGTRLWALLHAPALLAGGVGGPGDVARIED
Ga0318522_102729471	3300031894	Soil	MTEAQILQCAPAPADHAGTSTVPGGRGRRSRRLGTRLWSLLHAPALLAGGVSGPGDVTYIEDDRV
Ga0318551_106729191	3300031896	Soil	MTEAQILQCAPAPADHAGTSTVPGGRGRRSRRLGTRLWSLLHAPALLAGGVSGPGDVTYVEDDRVRLAHRQAR
Ga0306923_113016582	3300031910	Soil	MTEAQTLQCAPAPAAHAGTSTVPGGRGRRGRRLGTRLWTLLHAPALLAGRVGGPGDVAHFEDDRVRLAHRQAR
Ga0318562_100197561	3300032008	Soil	MTEAQILQCAPAPAAQARTSTVPGGRGRRGHRLGTRLWTLLHAPALLAGGVGGPGDVARIEDDRVRLAHRISG
Ga0318562_101810141	3300032008	Soil	TEAQTLQCAPAPAAHAGTSTVPGGRGRRGRRLGTRLWTLLHAPALLAGGVGGPGDVAHFEDDRVRLAHRQAR
Ga0318562_102329241	3300032008	Soil	TMTEAQIVQRAPAPAAQAGTSTVPGGRGRRSRRLGTRLWSLLHAPALLAGGVSGPGDVTYIEDDRVRLAHRQAR
Ga0318563_104366842	3300032009	Soil	MTEAQTLQCAPAPAAHAGTSTVPGGRGRRGRRLGTRLWTLLHAPALLAGGVGGPGDVAHFEDDRVRLAHRQAR
Ga0318556_100245401	3300032043	Soil	MTEAQILQCASAPAAQARTSTVPGGRGRRGRRLGTRLWTLLHAPALLAGGVGGPGDVARIEDDRVRL
Ga0318506_103694932	3300032052	Soil	APAAQARTSTVPGGRGRRGRRLGTRLWTLLHAPALLAGGVGGPGDVARIEDDRVRLAHRQAR
Ga0318570_102225161	3300032054	Soil	MTEAQILQCAPAPAAQARTSTVPGGRGRRGHRLGTRLWTLLHAPALLAGGVGGPGDVARIEDDRVRLAHRQ
Ga0318570_104531022	3300032054	Soil	MTEAQILPCAPAPAAQAGTSTAPGGRSRRGRRLGTRLWTLLHAPALLAGGVGGPGDVARIEDDRVRLA
Ga0318510_104036262	3300032064	Soil	MTEAQILQCPPAPAAHAGTSTAPGGRGRRSRRLGTRLWSLLHAPALLAGGVSGPGDVTYFEDDRV
Ga0318514_101656302	3300032066	Soil	QRAPAPAAQAGTSTVPGGRGRRSRRLGTRLWSLLHAPALLAGGVSGPGDVTYIEDDRVRLAHRQAR
Ga0307472_1004232553	3300032205	Hardwood Forest Soil	MTEAQILQCAPAPAAHAGTSTVPRGRGRRSRRLGTRLWSLLHAPALLAGGVSGQGDVTYMEDDRVRLAHRQAR
Ga0310914_103001923	3300033289	Soil	MTEAQILQCAPAPAAQARTSTVPGGRGRRGHRLGTRLWTLLHAPALLAGGVGGPGDVARIEDDRV
Ga0310914_110828341	3300033289	Soil	MTEAQTLQCAPAPAAHAGTSTVPGGRGRRGRRLGTRLWTLLHAPALLAGGVGGPGDVAHLEDDRVRLA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F071109

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences