Metagenome Family F071055

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F071055
Family Type	Metagenome
Number of Sequences	122
Average Sequence Length	110 residues
Representative Sequence	MAVNLFIKDDTDTAENWDACWNALESLPGRDLPTVVMRAEAARIINSCRAVTEGRGIEHIEERALAAYRLAEDRLAAGSDEHLNRFMVALDGALSVLRQVRWESPDSPR
Number of Associated Samples	54
Number of Associated Scaffolds	122

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	60.66 %
% of genes near scaffold ends (potentially truncated)	28.69 %
% of genes from short scaffolds (< 2000 bps)	82.79 %
Associated GOLD sequencing projects	48
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.51

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (55.738 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (87.705 % of family members)
Environment Ontology (ENVO)	Unclassified (86.885 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (88.525 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 61.31% β-sheet: 0.00% Coil/Unstructured: 38.69%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.51
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.51
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 122 Family Scaffolds
PF13463	HTH_27	42.62
PF01242	PTPS	2.46
PF13365	Trypsin_2	2.46
PF13577	SnoaL_4	1.64
PF02397	Bac_transf	0.82
PF00072	Response_reg	0.82
PF13586	DDE_Tnp_1_2	0.82
PF13808	DDE_Tnp_1_assoc	0.82
PF00005	ABC_tran	0.82
PF06627	DUF1153	0.82
PF12833	HTH_18	0.82
PF00331	Glyco_hydro_10	0.82
PF01738	DLH	0.82

COG ID	Name	Functional Category	% Frequency in 122 Family Scaffolds
COG0720	6-pyruvoyl-tetrahydropterin synthase	Coenzyme transport and metabolism [H]	2.46
COG2148	Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid)	Cell wall/membrane/envelope biogenesis [M]	0.82
COG3693	Endo-1,4-beta-xylanase, GH35 family	Carbohydrate transport and metabolism [G]	0.82

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	55.74 %
Unclassified	root	N/A	44.26 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	55.74 %
Unclassified	root	N/A	44.26 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	55.74 %
Unclassified	root	N/A	44.26 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.26 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	24.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.26 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	18.85 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.26 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	4.10 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	4.10 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.64 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.26 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.10 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.82 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.82 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.26 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.10 %
unclassified Rhodospirillaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae	0.82 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.82 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.26 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.10 %
Rhodospirillaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	0.82 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.82 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.26 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.10 %
Bradyrhizobium sp. th.b2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. th.b2	0.82 %
Rhodospirillaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	0.82 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.82 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001664\|P5cmW16_1071205	Not Available	561	Open in IMG/M
3300005177\|Ga0066690_10938777	Not Available	549	Open in IMG/M
3300005552\|Ga0066701_10351966	Not Available	912	Open in IMG/M
3300005586\|Ga0066691_10742241	Not Available	580	Open in IMG/M
3300006028\|Ga0070717_10945902	All Organisms → cellular organisms → Bacteria → Proteobacteria	785	Open in IMG/M
3300006796\|Ga0066665_10384788	Not Available	1154	Open in IMG/M
3300007255\|Ga0099791_10102149	All Organisms → cellular organisms → Bacteria	1320	Open in IMG/M
3300007255\|Ga0099791_10147268	All Organisms → cellular organisms → Bacteria	1099	Open in IMG/M
3300009012\|Ga0066710_103896217	Not Available	559	Open in IMG/M
3300009038\|Ga0099829_10007973	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	6674	Open in IMG/M
3300009038\|Ga0099829_10142138	All Organisms → cellular organisms → Bacteria → Proteobacteria	1909	Open in IMG/M
3300009038\|Ga0099829_10176170	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1719	Open in IMG/M
3300009038\|Ga0099829_10929715	Not Available	721	Open in IMG/M
3300009038\|Ga0099829_11100834	Not Available	658	Open in IMG/M
3300009088\|Ga0099830_10299137	Not Available	1284	Open in IMG/M
3300009088\|Ga0099830_10299264	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. th.b2	1284	Open in IMG/M
3300009088\|Ga0099830_10416337	All Organisms → cellular organisms → Bacteria	1088	Open in IMG/M
3300009088\|Ga0099830_10542942	Not Available	951	Open in IMG/M
3300009090\|Ga0099827_10033853	All Organisms → cellular organisms → Bacteria → Proteobacteria	3716	Open in IMG/M
3300009090\|Ga0099827_10078315	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2573	Open in IMG/M
3300009090\|Ga0099827_10400781	All Organisms → cellular organisms → Bacteria	1172	Open in IMG/M
3300009090\|Ga0099827_10450881	Not Available	1103	Open in IMG/M
3300009090\|Ga0099827_11346459	Not Available	621	Open in IMG/M
3300009090\|Ga0099827_11655575	Not Available	557	Open in IMG/M
3300009137\|Ga0066709_100286677	All Organisms → cellular organisms → Bacteria	2228	Open in IMG/M
3300009137\|Ga0066709_102094912	Not Available	782	Open in IMG/M
3300009143\|Ga0099792_10181838	All Organisms → cellular organisms → Bacteria	1183	Open in IMG/M
3300009143\|Ga0099792_10330987	All Organisms → cellular organisms → Bacteria	913	Open in IMG/M
3300011269\|Ga0137392_10132866	All Organisms → cellular organisms → Bacteria	1996	Open in IMG/M
3300011269\|Ga0137392_10266452	All Organisms → cellular organisms → Bacteria	1412	Open in IMG/M
3300011269\|Ga0137392_10432461	All Organisms → cellular organisms → Bacteria	1093	Open in IMG/M
3300011269\|Ga0137392_10560969	Not Available	948	Open in IMG/M
3300011269\|Ga0137392_10893512	Not Available	732	Open in IMG/M
3300011269\|Ga0137392_11131014	Not Available	641	Open in IMG/M
3300011270\|Ga0137391_10200032	All Organisms → cellular organisms → Bacteria	1738	Open in IMG/M
3300011270\|Ga0137391_10247548	All Organisms → cellular organisms → Bacteria	1546	Open in IMG/M
3300011270\|Ga0137391_10397242	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1179	Open in IMG/M
3300011270\|Ga0137391_10632255	All Organisms → cellular organisms → Bacteria	895	Open in IMG/M
3300011271\|Ga0137393_10129202	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2092	Open in IMG/M
3300011271\|Ga0137393_10430434	All Organisms → cellular organisms → Bacteria	1131	Open in IMG/M
3300011999\|Ga0120148_1029149	Not Available	1192	Open in IMG/M
3300012010\|Ga0120118_1002457	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	6258	Open in IMG/M
3300012096\|Ga0137389_10015993	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5155	Open in IMG/M
3300012096\|Ga0137389_10087257	Not Available	2452	Open in IMG/M
3300012096\|Ga0137389_10470280	All Organisms → cellular organisms → Bacteria	1077	Open in IMG/M
3300012096\|Ga0137389_10582250	Not Available	961	Open in IMG/M
3300012096\|Ga0137389_10768525	All Organisms → cellular organisms → Bacteria	827	Open in IMG/M
3300012189\|Ga0137388_10937267	Not Available	800	Open in IMG/M
3300012199\|Ga0137383_10195812	All Organisms → cellular organisms → Bacteria	1481	Open in IMG/M
3300012199\|Ga0137383_10222501	All Organisms → cellular organisms → Bacteria	1383	Open in IMG/M
3300012199\|Ga0137383_10585258	Not Available	816	Open in IMG/M
3300012201\|Ga0137365_11160115	Not Available	554	Open in IMG/M
3300012202\|Ga0137363_10028118	All Organisms → cellular organisms → Bacteria	3856	Open in IMG/M
3300012202\|Ga0137363_10118215	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2041	Open in IMG/M
3300012205\|Ga0137362_10176712	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1834	Open in IMG/M
3300012205\|Ga0137362_10732201	Not Available	849	Open in IMG/M
3300012206\|Ga0137380_10378532	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1260	Open in IMG/M
3300012206\|Ga0137380_10393724	Not Available	1231	Open in IMG/M
3300012206\|Ga0137380_10660756	Not Available	910	Open in IMG/M
3300012206\|Ga0137380_10990890	Not Available	719	Open in IMG/M
3300012207\|Ga0137381_10074020	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2852	Open in IMG/M
3300012207\|Ga0137381_10271199	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1476	Open in IMG/M
3300012207\|Ga0137381_10296041	All Organisms → cellular organisms → Bacteria	1409	Open in IMG/M
3300012207\|Ga0137381_10336148	All Organisms → cellular organisms → Bacteria	1316	Open in IMG/M
3300012207\|Ga0137381_10679043	All Organisms → cellular organisms → Bacteria	896	Open in IMG/M
3300012207\|Ga0137381_10837728	Not Available	796	Open in IMG/M
3300012207\|Ga0137381_11154216	Not Available	666	Open in IMG/M
3300012209\|Ga0137379_10051738	All Organisms → cellular organisms → Bacteria → Proteobacteria	3955	Open in IMG/M
3300012209\|Ga0137379_10271593	All Organisms → cellular organisms → Bacteria	1607	Open in IMG/M
3300012209\|Ga0137379_10318436	All Organisms → cellular organisms → Bacteria	1466	Open in IMG/M
3300012210\|Ga0137378_10150482	All Organisms → cellular organisms → Bacteria	2157	Open in IMG/M
3300012210\|Ga0137378_10219840	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1769	Open in IMG/M
3300012210\|Ga0137378_10807907	All Organisms → cellular organisms → Bacteria	850	Open in IMG/M
3300012210\|Ga0137378_11539398	Not Available	575	Open in IMG/M
3300012210\|Ga0137378_11671552	Not Available	544	Open in IMG/M
3300012211\|Ga0137377_10059365	All Organisms → cellular organisms → Bacteria	3556	Open in IMG/M
3300012211\|Ga0137377_10231812	All Organisms → cellular organisms → Bacteria	1773	Open in IMG/M
3300012211\|Ga0137377_10499529	All Organisms → cellular organisms → Bacteria → Proteobacteria	1154	Open in IMG/M
3300012211\|Ga0137377_10625592	Not Available	1013	Open in IMG/M
3300012211\|Ga0137377_11532439	Not Available	592	Open in IMG/M
3300012349\|Ga0137387_10164051	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1587	Open in IMG/M
3300012349\|Ga0137387_10167082	Not Available	1572	Open in IMG/M
3300012349\|Ga0137387_10596178	Not Available	801	Open in IMG/M
3300012349\|Ga0137387_10886726	Not Available	645	Open in IMG/M
3300012350\|Ga0137372_10805800	Not Available	673	Open in IMG/M
3300012351\|Ga0137386_10973596	Not Available	605	Open in IMG/M
3300012354\|Ga0137366_10276212	All Organisms → cellular organisms → Bacteria	1241	Open in IMG/M
3300012357\|Ga0137384_10195711	Not Available	1692	Open in IMG/M
3300012357\|Ga0137384_10309017	All Organisms → cellular organisms → Bacteria	1314	Open in IMG/M
3300012359\|Ga0137385_10027192	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5129	Open in IMG/M
3300012359\|Ga0137385_10151480	All Organisms → cellular organisms → Bacteria	2040	Open in IMG/M
3300012359\|Ga0137385_10315836	Not Available	1342	Open in IMG/M
3300012361\|Ga0137360_10183765	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1682	Open in IMG/M
3300012363\|Ga0137390_10167899	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2182	Open in IMG/M
3300012363\|Ga0137390_10280475	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1650	Open in IMG/M
3300012363\|Ga0137390_10771077	Not Available	921	Open in IMG/M
3300012363\|Ga0137390_10784362	Not Available	911	Open in IMG/M
3300012363\|Ga0137390_11167857	Not Available	718	Open in IMG/M
3300012683\|Ga0137398_10760009	Not Available	676	Open in IMG/M
3300012917\|Ga0137395_10091665	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	2002	Open in IMG/M
3300012917\|Ga0137395_10707452	Not Available	729	Open in IMG/M
3300012918\|Ga0137396_10154044	All Organisms → cellular organisms → Bacteria → Proteobacteria	1675	Open in IMG/M
3300012922\|Ga0137394_11255585	Not Available	604	Open in IMG/M
3300012927\|Ga0137416_10208533	All Organisms → cellular organisms → Bacteria	1572	Open in IMG/M
3300012929\|Ga0137404_11817644	Not Available	567	Open in IMG/M
3300015241\|Ga0137418_10315958	All Organisms → cellular organisms → Bacteria	1301	Open in IMG/M
3300018433\|Ga0066667_10036755	All Organisms → cellular organisms → Bacteria	2822	Open in IMG/M
3300019888\|Ga0193751_1047954	All Organisms → cellular organisms → Bacteria	1859	Open in IMG/M
3300026524\|Ga0209690_1214213	Not Available	608	Open in IMG/M
3300027846\|Ga0209180_10056285	All Organisms → cellular organisms → Bacteria	2179	Open in IMG/M
3300027862\|Ga0209701_10096408	All Organisms → cellular organisms → Bacteria	1852	Open in IMG/M
3300027862\|Ga0209701_10722132	Not Available	511	Open in IMG/M
3300027875\|Ga0209283_10317442	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1026	Open in IMG/M
3300027882\|Ga0209590_10066944	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2056	Open in IMG/M
3300027882\|Ga0209590_10122718	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1581	Open in IMG/M
3300027882\|Ga0209590_10302759	Not Available	1027	Open in IMG/M
3300027882\|Ga0209590_10306580	Not Available	1020	Open in IMG/M
3300027882\|Ga0209590_10433289	Not Available	850	Open in IMG/M
3300027903\|Ga0209488_10122049	All Organisms → cellular organisms → Bacteria	1961	Open in IMG/M
3300028536\|Ga0137415_10197250	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1833	Open in IMG/M
3300028536\|Ga0137415_11489506	Not Available	502	Open in IMG/M
3300031753\|Ga0307477_10690865	Not Available	683	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	99.18%
Loam	Environmental → Terrestrial → Soil → Loam	0.82%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	88.52%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.38%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	2.46%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.82%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.82%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	87.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.10%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.28%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	2.46%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.82%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.82%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.82%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001664	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - 5cm_reassembled	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300011999	Permafrost microbial communities from Nunavut, Canada - A28_65cm_6M	Environmental	Open in IMG/M
3300012010	Permafrost microbial communities from Nunavut, Canada - A7_35cm_12M	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300026524	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
P5cmW16_10712051	3300001664	Permafrost	MAANPFSGDDTDSAEKWDACWNALESLPGCDLPTVAMHAEAVRIISSYRAVTEGRGIERIEDRAQAAYRLGAGGLAAGSDEHLNRFMVALSGALSVLRRVPRESPGNPR*
Ga0066690_109387771	3300005177	Soil	DDTQTAENWDACWNALESLPGRDLPPIAMHAEAVRIINSWRAVTEGRGIEHVEERALVAYRLAADQLAAGSDEHLNRVMVALEGALSVLRQVRWESPDIP*
Ga0066701_103519661	3300005552	Soil	MAVDLFIKDDTDTAANWDACWNALESLPGRDLPTVVMRAEAARIINSCRAMTEGRGIEHIEERALAAYRLAGDRLAAGADEHLNRFMVALDGALSVLRQVRWESPDSPR*
Ga0066691_107422412	3300005586	Soil	ENWDACWNALESLPGRDLPPIAMHAEAVRIINSWRTVTEGRGIEHIEERALVAYRLAADQLAAGSDEHLNRFMVALDGALSVLRQVRWESPDSPR*
Ga0070717_109459021	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MAASPFSGDDTDSVEKWDACWNALESLPGRDLTTVAIQAEAARIINSCRAMTEARGIEYIEDRARVAYRVAVDQLATSADERLNRFLAALDGALSVLRRVPREVT*
Ga0066665_103847882	3300006796	Soil	MAANPFSEDDTENTENWDACWNALKSLPGRDLPPIAMHAEAARIINSWRAVTEGRGIEHIEERALVAYRLVTNRLAAGSDEHLNRFMVALDGALSVLRQVRWQSPDIPR*
Ga0099791_101021491	3300007255	Vadose Zone Soil	MGSREHLAMGVNLFSEDDTHTVENWDACWNALESLPGGDLPTVVMHAEAARIVNSCRAVTEGRGIEHIEERALAAYRLAADRLAAGSDEHLNRLMVALDGALSVLRQARWESPARPR*
Ga0099791_101472683	3300007255	Vadose Zone Soil	MAMNFFGKDDADPAENWDACWNALESLSARDLTTVAMQAEAARIVNSCRTVTEGRGIEYIEERARAVYRLAADRLAASSDEHLTRFIATLDGALTVLRQTP*
Ga0066710_1038962172	3300009012	Grasslands Soil	MVANLLREDDTHTAENWDACWTALESLPGRDLPTVVMHAEAARIVNSCRAVTEGRGIEHIEARALAAYRLAADRLAASSDEHLNRFMVTLDGALSVLRQAR
Ga0099829_100079735	3300009038	Vadose Zone Soil	MAANPLGEDDTQTAENWDACWNALESLPGRDLGPIAMHAEAVRIINSWRAVTEGRGIEHIEERALVAYRLAADQLAAGSDEHLNRFMVALHGALSALRQVRWESPDIPR*
Ga0099829_101421382	3300009038	Vadose Zone Soil	VAANPLSEDDTQTAENWDACWNALESLPGRDLPPIAMHAEAARIINSWRSVTEGRGIEHIEERALVAYRLAADRLAAGSDEHLNRFMVALDGALSVLRQLRFESLDKFGPHRHLAPLAPGTGHS*
Ga0099829_101761701	3300009038	Vadose Zone Soil	MATNLFSEDDTHTAENWDACWNALESLPGRDLPTLAMHAEAARIINSFRAVTEGRGIEHLEERALAAYHLAADRLAAGSDEHLNRFMVTLDGALSVLRQARWESPDSPQ*
Ga0099829_109297151	3300009038	Vadose Zone Soil	MGSREHLAMAVNLFSEDDTHTVENWDACWNALESLPGRDLPTVVMHAEAARIVNSCRAVTEGRGIEHIEERALAAYRLAADRLAAGSDEHLNRLMVALDGALSVLRRVRWESPARPR*
Ga0099829_111008341	3300009038	Vadose Zone Soil	DTAENWDACWNALESLPGRDLPTVVMRAEAARIINSCRAVTEGRGIEHIEERALAAYRLAEDRLAAGSDEHSNRFMVVLDGALSVLRQVRWESPDRPR*
Ga0099830_102991371	3300009088	Vadose Zone Soil	DACWNALESLPGGDLPTVVMHAEAARIINSFRAVTEGRGIEHLEERALAAYRLAADRLAAGSDEHLNRFMVTLDGALSVLRQARWESPDSPQ*
Ga0099830_102992641	3300009088	Vadose Zone Soil	MAADLFIKDDTDTAANWDACWNALESLPGGDLPTVVMHAEAARIVNSCRGVTEGRGIEHIEERALAAYRLAADRLAAGSDEHLNRLMVALDGALSVLRRVRWESPARPR*
Ga0099830_104163372	3300009088	Vadose Zone Soil	MNSLGRDDTDPTENWDACWNALERLSARDLPTVAMQAEAARIVNSCRAVTEGRGIEYIEERARAVYRRAADRLAASSDEHLTRFIVTLDGALTVLRQVPGQSPESPQ*
Ga0099830_105429422	3300009088	Vadose Zone Soil	VAANPLSEDDTQTAENWDACWNALESLPGRDLPPIAMHAEAARIINSWRSVTEGRGIEHVEERALVAYRLAADQLAAGSDEHLNRFMVALDGALSVLRQARSESPAIPR*
Ga0099827_100338534	3300009090	Vadose Zone Soil	MAANLFSEDDTPTAENWDACWNALESLPSRDLPVPVMHVEAARIITSFRAVTEGRGIEHVEERALAAYRLAADRLVASSDEHLNRFMVTLDGALSVLRQAR*
Ga0099827_100783152	3300009090	Vadose Zone Soil	MGSREHLAMAVNLFSEDDTHTVENWDACWNALESLPGGDLPTVVMHAEAARIVNSCRAVTEGRGIEHIEERALAAYRLAADRLAAGSDEHLNRLMVALDGALSVLRRVRWESPARPR*
Ga0099827_104007811	3300009090	Vadose Zone Soil	MAVNLFRNDDTDPAENWDACWNALENLSRRDLPTVAMHEEAARIINSCRAVTEGRGIECIEERARVVYRLAADRPAAASDEHLNRFMVTLNGALTVLRQGPWVTPDNPR*
Ga0099827_104508812	3300009090	Vadose Zone Soil	MAVDLFIKDDTDTAANWDACWNALESLPGRDLPTVVMRAEAARIINSCRAMTEGRGIEHIEERALAAYRLAGDRLAAGSDEHSNRFMVVLDGALSVLRQVRWESPDSPR*
Ga0099827_113464591	3300009090	Vadose Zone Soil	NWDACWNALESLPGRDLPPIAMHAEAARIINSWRSVTEGRGIEHVEERALVAYRLAADQLAAGSDEHLNRFMVALDGALSVLRQARSESPAIPR*
Ga0099827_116555752	3300009090	Vadose Zone Soil	NWDACWNALESLPGRDLPPIAMHAEAARIINSWRSVTEGRGIEHIEERALVAYRLAADRLAAGSDEHLNRFMVALDGALSVLRQIRFESLDKFGPHRHLAPLAPGTGHS*
Ga0066709_1002866771	3300009137	Grasslands Soil	VLKPGFEFREHLAMAANPFSEDDIESTENWDACWNALESLPGRDLPPIAMHAEAARIINSWRAVTEGRGIEHIEERALVAYRLVTDRLAAGSDEHLNRFMVALDGALSVLRQFRWQSLDILR*
Ga0066709_1020949121	3300009137	Grasslands Soil	MVANLLREDDTRTAENWDACWNALESLSARDLPTVAMQAEAARIVNSCRAVTEGRGIEHIEERARAVYRLAADRLAASSDEHLTRLIVTLDGALSVLRQAR*
Ga0099792_101818383	3300009143	Vadose Zone Soil	VAANPLSEDDTQTAENWDACWNALESLPGRDLPPIAMHAEAARIINSWRSVTEGRGIEHIEERALVAYRLAADRLAAGSDEHLNRFMVALDGALSVLRQIRFESLDKFGPHRHLAPLAPGTGHS*
Ga0099792_103309872	3300009143	Vadose Zone Soil	MAANPLGEDDTQTAENWDACWNALESLPGRDLGPIAMHAEAVRIINSWRAVTGGRGIEHVEERALVAYRLAADQLAAGSDEHLNRFIMALDGALSVLRQVRWESPDIPR*
Ga0137392_101328663	3300011269	Vadose Zone Soil	MAVNLFIKDDTDTAENWDACWNALESLPGRDLPTVVMRAEAARIINSCRAVTEGRGIEHIEERALAAYRLAEDRLAAGSDEHLNRFMVALDGALSVLRQVRWESPDSPR*
Ga0137392_102664522	3300011269	Vadose Zone Soil	MNSLGKDDTDPTENWDACWNALERLSARDLPTVAMQAEAARIVNSCRAVTEGRGIEYIEERARAVYRRAVDRLTASSDEHLTRFIVTLDGALTVLRQVPGQSPESPQ*
Ga0137392_104324611	3300011269	Vadose Zone Soil	LSEDDTQIAENWDACWNALESLPGRDLGPIAMHAEAVRIINSWRAVTEGRGIEHIEERALVAYRLAADQLAAGSDEHLNRFMVALHGALSALRQVRWESPDIPR*
Ga0137392_105609692	3300011269	Vadose Zone Soil	MAANLFSEDDTHTAENWQACWNALESLPGRDLPTLVMHAEAARIINSFRAVTEGRGIEHLEERALAAYHLAADRLAAGSDEHLNRFMVTLDGALSVLRQARWESPDSPQ*
Ga0137392_108935121	3300011269	Vadose Zone Soil	MGSREHLAMAVNLFSEDDTHTVENWDACWNALESLPCGDLPTVVMHAEAARIVNSCRAVTEGRGIEHIEERALAAYRLAADRFAAGSDEHLNRLMVALDGALS
Ga0137392_111310142	3300011269	Vadose Zone Soil	SLVHKTGVAFGDYLAMAMNFFGKDDADPAENWDACWNALESLSARDLPTVAMQAEAARIVNSCRAVTEGRGIECIEERARAVYRLAADRLAACSDEHLTRFIVTLDGALTVLRQVPGQSPESPQ*
Ga0137391_102000323	3300011270	Vadose Zone Soil	MAMNFFGKDDADPAENWDACWNALESLSARDLTTVAMQAEAARIVNSCRTVTEGRGIEYIEERARAVYRLAADRLAASSDEHLTRFMITLDGALTVLRQTP*
Ga0137391_102475482	3300011270	Vadose Zone Soil	MATNLFSEDDTHTAENWDACWNALESLPGRDLPTLAMHAEAARIINSFRAVTEGRGIEHLEERALAAYRLAADRLAAGSDEHLNRFMVTLDGALSVLRQARWESPDSPQ*
Ga0137391_103972421	3300011270	Vadose Zone Soil	NWDACWNALESLPGRDLPPIAMHAEAARIINSWRSVTEGRGIEHIEERALVAYRLAADRLAAGSDEHLNRFMVALDGALSVLRQLRFESLDKFGPHRHLAPLAPGTGHS*
Ga0137391_106322551	3300011270	Vadose Zone Soil	MGSREHLAVAVNLFSEDDTHTVENWDACWNALESLPGGDLPTVVMHAEAARIVNSCRAVTEGRGIEHIEERALAAYRLAADRLAAGSDEHLNRLMVALDGALSVLRRVRWESPARPR*
Ga0137393_101292023	3300011271	Vadose Zone Soil	MAADLFIKDDTDTAANWDACWNALESLPGRDLPTVVMRAEAARIINSCRAVTEGRGIEHIEERALAAYRLAEDRLAAGSDEHLNRFMVALDGALSVLRQVRWESPDSPR*
Ga0137393_104304341	3300011271	Vadose Zone Soil	MNSLGKDDTDPTENWDACWNALERLSARDLPTVAMQAEAARIVNSCRAVTEGRGIECIEERARAVYRLAADRLAACSDEHLTRFIVTLDGALTVLRQVPGQSPESPQ*
Ga0120148_10291491	3300011999	Permafrost	MAANPFSGDDTDSAEKWDACWNALESLPGCDLPTVPMHAEAVRIISSYRAVTEGRGIERIEDRAQAAYRLGAGRLAAGSDEHLNRFMVALSGALSVLRRVPRESPGNPR*
Ga0120118_10024572	3300012010	Permafrost	MAANPFSGDDTDSAEKWDACWNALESLPGCDLPTVAMHAEAVRIISSYRAVTEGRGIERIEDRAQAAYRLGAGRLAAGSDEHLNRFMVALSGALSVLRRVPRESPGNPR*
Ga0137389_100159936	3300012096	Vadose Zone Soil	MAANPLSEDDTQTAENWDACWNALESLPGRDLPPIAMHAEAARIINSWRSVTEGRGIEHIEERALVAYRLAADRLAAGSDEHLNRFMVALDGALSVLRQIRFESLDKFGPHRHLAPLAPGTGHS*
Ga0137389_100872573	3300012096	Vadose Zone Soil	MAANPLSEDDIQTAENWDACWNALESLPGRDLPPIAMHAEAARIINSWRAVTEGRGIEHVEERALVAYRLAADQLAAGSDEHLNRFMVALDGALSVLRQARSESPAIPR*
Ga0137389_104702802	3300012096	Vadose Zone Soil	MATNLFSEDDTHTAENWDACWNALESLPGRDLPTLAMHAEAARIINSFRAVTEGRGIEHLEERALAAYRLAAGRLAAGSDEHLNRFMVTLDGALSVLRQARWESPDSPQ*
Ga0137389_105822502	3300012096	Vadose Zone Soil	MAVNLFIKDDTDTDENWDACWNALESLPGRDLPTVVMRAEAARIINSCRAVTEGRGIEHIEERALAAYHLAGGRLAAGSDEHLNRFMVVLDGALSVLR
Ga0137389_107685252	3300012096	Vadose Zone Soil	MNSLGKDDTDPTENWDACWNALERLSARDLPTVAMQAEAARIVNSCRAVTEGRGIEYIEERARAVYRRAADRLAASSDEHLTRFIVTLDGALTVLRQVPGQSPESPQ*
Ga0137388_109372671	3300012189	Vadose Zone Soil	RVMGSREHLAMAVNLFSEDDAHTVENWDACWNALESLPGRDLPTVVMHAKAARIVNSCRAVTEGRGIEHIEERALAAYRLAADRLAAGSDEHLNRLMVALDGALSVLRRVRWESPARPR*
Ga0137383_101958122	3300012199	Vadose Zone Soil	MAANLFSEDDTHTAENWDACWNALESLPSRDLPVPVMHVEAARIITSFRAVTEGRGIEHVEERALAAYRLAADRLVASSDEHLNRFMVTLDGALSVLRQAR*
Ga0137383_102225012	3300012199	Vadose Zone Soil	VLKPGFEFREHLAMAANPFSEDDIESTENWDACWNALESLPGRDLPPIAMHAEAARIINSWRAVTEGRGIEHIEERALVAYRLVTDRLAAGSDEHLNRFMVALDGALSVLRQVRWQSPD
Ga0137383_105852581	3300012199	Vadose Zone Soil	MAADLFIKDDTDTAANWDACWNALESLPGRDLPTVVMRAEAARIINSCRAMTEGRGIEHIEERALAAYRLAGDRLAAGSDEHSNRFMVVLDGALSVLRQVRWESPDSPR*
Ga0137365_111601151	3300012201	Vadose Zone Soil	MAANPFSGDDTDSAEKWDACWNALESLPGCDLPTVVMHAEAVRIISSYRAVTEGRGIEHLEERAQAAYRLVGGRLSAGSDEHLNRFMAALDGALSVLR
Ga0137363_100281184	3300012202	Vadose Zone Soil	MGSREHLAMTVNLFSEDDTHTVENWDACWNALESLPGGDLPTVVMHAEAARIVNSCRAVTEGRGIEHIEERALAAYRLAADRLAAGSDEHLNRLMVALDGALSVLRRVRWESPARPR*
Ga0137363_101182153	3300012202	Vadose Zone Soil	MAMNFFGKDDADPAENWDACWNALESLSARDLTTVAMQAEAARIVNSCRTVTEGRGIECIEERARAVYRLAADRLAASSDEHLTRFIVTLDGALTVLRQVPGQSPESPQ*
Ga0137362_101767122	3300012205	Vadose Zone Soil	MAMNFFGKDDADPAENWDACWNALESLSARDLTTVAMQAEAARIVNSCRTVTEGRGIECIEERARAVYRLAADRLAASSDEHLTRFIATLDGALTVLRQVPGQSPESPQ*
Ga0137362_107322011	3300012205	Vadose Zone Soil	MAADLFIKDDTDTAANWDACWNALESLPGRDLPTVVMRAEAARIINSCRAMTEGRGIEHIEERALAAYRLAGDRLAAGSDEHLNRFMVVLDGALSVLRQVRWESPDSPR*
Ga0137380_103785322	3300012206	Vadose Zone Soil	MAANLFSEDDTHTAENWDACWNALESLPSRDLPVPVMHAEAARIINSFRAVTEGRGIEHVEERALAAYRLAADRLVASSDEHLNRFMVTLDGALSVLRQAR*
Ga0137380_103937242	3300012206	Vadose Zone Soil	MGSREHLAMAVNLFSEDDTHTVENWDACWNALESLPGGDLPTVVMHAEAARIVNSCRAVTEGRGIEHIEERALAAYRLAADRLAAGSDEHLNRLMVALDGALSVLRQVRWEAPARPR*
Ga0137380_106607562	3300012206	Vadose Zone Soil	VAANPLSEDDTQTAENWDACWNALESLPGRDLPPIAMHAEAARIINSWRAVTEGRGIERVEERALVAYRLAADQLAAGSDEHLNRVMVALDGALSVLRKVRWESPDIP*
Ga0137380_109908901	3300012206	Vadose Zone Soil	FTSLVHKPGLAFREHLAMTVNLFRNDDTDPAENWDACWNALENLSRRDLPTVAMHEEAARIINSCRAVTEGRGIECIEERARVVYRLAADRPAAASDEHLNRFMVTLNGALTVLRQGPWVTPDNPR*
Ga0137381_100740202	3300012207	Vadose Zone Soil	MGSREHLAMAVNLFSEDDTHTVENWDACWNALESLPGGDLPTVVMHAEAARIVNSCRAVTEGRGIEHIEERALAAYCLAADRLAAGSDEHLNRLMVALDGALSVLRRVRWESPARPR*
Ga0137381_102711992	3300012207	Vadose Zone Soil	MTVNLFRNDDTDPAENWDACWNALENLSRRDLPTVAMHEEAARIINSCRAVTEGRGIECIEERARVVYRLAADRPAAASDEHLNRFMVTLNGALTVLRQGPWVTPDNPR*
Ga0137381_102960412	3300012207	Vadose Zone Soil	MAVDLFIKDDTDTAANWDACWNALESLPGRDLPTVVMRAEAARIINSCRAMTEGRGIEHIEERALAAYRLAGDRLAAGADEHLKRFMVALDGALSVLRQVRWESPDSPR*
Ga0137381_103361482	3300012207	Vadose Zone Soil	MAMNFFCKDDADPAENWDACWNALESLSARDLPTVVMQAEAARIVNSCRAVTEGRGIEFIEERARAVYRLAADRLAASSDEHLTRFIVTLDGALTVLRQVPGQ
Ga0137381_106790432	3300012207	Vadose Zone Soil	VLKPGFEFREHLAMAANPFSEDDIESTENWDACWNALESLPGRDLPPIAMHAEAARIINSWRAVTEGRGIEHIEERALVAYRLVTDRLAAGSDEHLNRFMVALDGGEPI
Ga0137381_108377281	3300012207	Vadose Zone Soil	MAANPFSGDDTDSAEKWDACWNALESLPGCDLPTGVMHAEAVRIISSYRAVTEGRGIEHLEERAQAAYRLVAGRLSAGSDEHLNRFMVVLGGALSVLRRVPREPPGNPR*
Ga0137381_111542162	3300012207	Vadose Zone Soil	CLNRASDSREPLAVAANPLSEDDTQTAENWDACWNALESLPGRDLPPIAMHAEAARIINSWRAVTEGRGIERVEERALVAHRLAADQLAAGSDKHLNRVMVALDGALSVLRQVRWESPDIP*
Ga0137379_100517384	3300012209	Vadose Zone Soil	MAVDLIIKDDTETAKDDTDTAANWDACWNALESLPGRDLPTVVMRAEAARIINSCRAVTEGRGIEHIQERALAAYRLAEDRLAAGSDEHLNRFMVALDGALSVLRQVRWESLDSPR*
Ga0137379_102715933	3300012209	Vadose Zone Soil	MNFFGKDDTDPAENWDACWNALESLSARDLPTVAMQAEAARIVNSCRAVTEGRGIEFIEERARAVYRLAADRLAASSDEHLTRFMVTLDGALTVLRQTP*
Ga0137379_103184362	3300012209	Vadose Zone Soil	MAADLFIKDDTDTAANWDACWNALESLPGRDLPTVVMRAEAARIINSCRAMTEGRGIEHIEERALAAYRLAGDRLAAGADEHLTRFMVALDGALSVLRQVRWESPDSPR*
Ga0137378_101504822	3300012210	Vadose Zone Soil	MHKPGFGFREHLAMPALFREDDSDIAENWDRCWNTLESLPCRDLPIVAMHAEAARIVNSYRAVTEGRGIEHIEERAQAVYRLTVDRLAAGSDEHLNRFMAALDGALSVLRQVRWESPDRPR*
Ga0137378_102198402	3300012210	Vadose Zone Soil	MAANLFSEDDTPTAENWDACWNALESLPSRDLPVPVMHAEAARIINSFRAVTEGRGIEHVEERALAAYRLAADRLVASSDEHLNRFMVTLDGALSVLRQAR*
Ga0137378_108079071	3300012210	Vadose Zone Soil	MAVNFLGNDDTDPAENWDACWSALENLSRRDLPTVAMHAEAARIINSCRAVTEGRGIEFIEERARVVYRLAADRPSANSDEHLNRFMVTLDGALTVLRQGTWESPDNPR*
Ga0137378_115393981	3300012210	Vadose Zone Soil	AADLFIKDDTDTAANWDACWNALESLPGRDLPTVVMHAEAARIVNSCRAVTEGRGIEHIEERALAAYRLAADRLAAGSDEHLNRLMVALDGALSVLRQVRWEAPARPR*
Ga0137378_116715521	3300012210	Vadose Zone Soil	LFNNPFTSLVHKPGLAFREHLAMTVNLFRNDDTDPAENWDACWNALENLSRRDLPTVAMHEEAARIINSCRAVTEGRGIECIEERARVVYRLAADRPAAASDEHLNRFMVTLNGALTVLRQGPWVTPDNPR*
Ga0137377_100593653	3300012211	Vadose Zone Soil	VLKPGFEFREHLAMAANPFSEDDIESTENWDACWNALESLPGRDLPPIAMHAEAARIINSWRAVTEGRGIEHIEERALVAYRLVTDRLAAGSDEHLNRFMMALDGALSVLRQVRWQSPDIPR*
Ga0137377_102318122	3300012211	Vadose Zone Soil	TAENWDACWNALESLPGRDLPPIAMHAEAVRIINSWRAVTEGRGIEHIEERALVAYRLAADQLAAGSDEHLNRFMVALDGALSVLRQVRWESPDSPR*
Ga0137377_104995291	3300012211	Vadose Zone Soil	MAANPLSEDDTQTAENWDACWNALESLPGRDLSPIAMHAEAARIINAWRTVTEGRGIEHVEERALVAYRLAADQLAAGSDEHVNRFMAALDGALSVLRQVRSGSPRRSSEVAGK*
Ga0137377_106255922	3300012211	Vadose Zone Soil	MAADLFIKDDTDTAANWDACWNALESLPGRDLPTVVMRAEAARIINSCRAMTEGRGIEHIEERALAAYRLAADRLAAGSDEHLNRFMVVLDGALSVLRQVRWESPDSPR*
Ga0137377_115324391	3300012211	Vadose Zone Soil	MNFFGKDDTDPAENWDACWNALESLSARDLPTVAMQAEAARIVNSCRAVTEGRGIEYIEERARAVYRLAADRLAASSDEHLTQFIMTLDGALTVLRQTP*
Ga0137387_101640511	3300012349	Vadose Zone Soil	MNFFGKDDTDPAENWDACWIALESLSARDLPTVTMQAEAARIVNSCRAVTEGRGIEHIEERARAVYRLAADRLAASSDEHLTRFIVTLDGALTVLRQTP*
Ga0137387_101670822	3300012349	Vadose Zone Soil	MAVDLFIKDDTDTAANWDACWNALESLPGRDLPTVVMRAEAARIINSCRAMTEGRGIEHIEERALAAYHLAGGRLAAGSDEHLNRFIVVLDGALSVLRQVRWETPDSPR*
Ga0137387_105961781	3300012349	Vadose Zone Soil	VLKPGFEFREHLAMAANPFSGDDTDSAEKWDACWNALESLPGCDLPTVVMHAEAVRIISSYRAVTEGRGIEHLEERAQAAYRLVGGRLSAGPDVRLNRFMVVLGGALSVLRRVPREPPGNPR*
Ga0137387_108867261	3300012349	Vadose Zone Soil	MGSREHLAMAVNLFSEDDTHTAENWDACWNALESLPGRDLPTVVMHAEAARIVNSCRAVTEGRGIEHIEERALAAYRLAGDRLAAGADEHLTRFMVALDGALSVLRQV*
Ga0137372_108058002	3300012350	Vadose Zone Soil	MHKLGFGFREHLAMPAPFPKNDSDIAENWDRCWNTLESLPCRDLPIVAMHAEAARIVNSYRAVTEGRGIEHIEERAQAVYRLTVDRLAAGSDEHLNRFMAALDGALSVLRQVRWESPDRPR*
Ga0137386_109735961	3300012351	Vadose Zone Soil	MGSREHLAMAVNLFSEDDTHTVENWDACWNALESLPGRDLPTVVMHAEAARIVNSCRAVTEGRGIEHIEERALAAYCLAADRLAAGSDEHLNRLMVALDGALSVLRRVRWESPARPR*
Ga0137366_102762121	3300012354	Vadose Zone Soil	MAVNFLGNDDTDPAENWDACWSALENLSRRDLPTVAMHAEAARIINSCRAVTEGRGIEFIEERARVVYRLAADRPSANSDEHLNRFMVTLDGALTVLRQGTW
Ga0137384_101957114	3300012357	Vadose Zone Soil	CLNRASDSREPLAVAANPLSEDDTQTAENWDACWNALESLPGRDLPPIAMHAEATRIINSWRAVTEGRGIERVEERALVAYRLAADQLAAGSDEHLNRVMVALDGALSVLRKVRRESPDIP*
Ga0137384_103090172	3300012357	Vadose Zone Soil	LGNDDTDPAENWDACWSALENLSRRDLPTVAMHAEAARIINSCRAVTEGRGIEFIEERARVVYRLAADRPAAASDEHLNRFMVTLNGALTVLRQGPWVTPDNPR*
Ga0137385_100271925	3300012359	Vadose Zone Soil	VAANPLSEDDTQTAENWDACWNALESLPGRDLPPIAMHAEATRIINSWRAVTEGRGIERVEERALVAYRLAADQLAAGSDEHLNRVMVALDGALSVLRQVRWESPDIP*
Ga0137385_101514801	3300012359	Vadose Zone Soil	DLFIKDDTDTAANWDACWNALESLPGRDLPTVVMRAEAARIINSCRAMTEGRGIEHIEERALAAYRLAGDRLAAGADEHLTRFMVALDGALSVLRQVRWESPDSPR*
Ga0137385_103158361	3300012359	Vadose Zone Soil	HKPGLAFREHLAMAVNLFRNDDTDPAENWDACWNALENLSRRDLPTVAMHEEAARIINSCRAVTEGRGIECIEERARVVYRLAADRPAAASDEHLNRFMVTLNGALTVLRQGPWVTPDNPR*
Ga0137360_101837653	3300012361	Vadose Zone Soil	MAMNFFGKDDADPAENWDACWNALESLSARDLTTVAMQAEAARIVNSCRTVTEGRGIEYIEERARAVYRLAADRLAASSDEHLTPFIATLDGALTVLRQVPGQSPESPQ*
Ga0137390_101678992	3300012363	Vadose Zone Soil	MATNLFIEDDTHTAENWDACWNALESLPGRDLPTLAMHAEAARIINSFRAVTEGRGIEHLEERALAAYRLAAGRLAAGSDEHLNRFMVTLDGALSVLRQARWESPDSPQ*
Ga0137390_102804752	3300012363	Vadose Zone Soil	MNSLGKDDTDPTENWDACWNALERLSARDLPTVAMQAEAARIVNSCRAVTEGRGIEYIEERARAVYRRAVDRLTASSDEHLTRFIVTLDGALTVLRQVHGQSPESPQ*
Ga0137390_107710771	3300012363	Vadose Zone Soil	MAVNLFIKDDTDTAENWDACWNALESLPGRDLPTVVMRAEAARIINSCRAVTEGRGIEHIEERALAAYRLAEDRLAAGSDEHLNRFMVALDGALSVLRQVRWESPARPR*
Ga0137390_107843621	3300012363	Vadose Zone Soil	EHLAVAANPLSEDDTQTAENWDACWNALESLPGRDLPPIAMHAEAARIINSWRSVTEGRGIEHVEERALVAYRLAADQLAAGSDEHLNRFMVALDGALSVLRQARSESPAIPR*
Ga0137390_111678572	3300012363	Vadose Zone Soil	MGSREHLAMAVNLFSEDDTHTVENWDACWNALESLPGRDLPTVVMHAEAARIVNSCRGVTEGRGIEHIEERALAAYRLAADRLAAGSDEHLNRLMVALDGALSVLRRVRWESPARPR*
Ga0137398_107600092	3300012683	Vadose Zone Soil	MAANPLSEDDTQTAENWDACWNALESLPGRDLPPIAMHAEAVRIINSWRAVTGGRGIEHVEERALVAYRLAADQLAAGSDEHLNRFIMALDGALSVLRQVRWESPDIPR*
Ga0137395_100916652	3300012917	Vadose Zone Soil	MAMNFFGKDDADPAENWDACWNALESLSARDLTTVAMQAEAARIVNSCRTVTEGRGIERIEERARAVYRLAADRLAASSDEHLTRFIVTLDGASTVLRQVPGQSPESPQ*
Ga0137395_107074521	3300012917	Vadose Zone Soil	VAANLLSDDDTQTAENWDACWNALESLPGRDLPPIAMHAEATRIINSWRAVTEGRGIERVEERALVAYRLAADQLAAGSDEHLNRFMVALDGALSVLRRVRW
Ga0137396_101540443	3300012918	Vadose Zone Soil	MGSREHLAMAVNLFSEDDTHTVENWDACWNALESLPGGDLPTVVMHAEAARIVNSCRAVTEGRGIEHIEERALAAYRLAADRLAAGSDEHLNRLMLALDGALSVLRRVRWESPARPR*
Ga0137394_112555851	3300012922	Vadose Zone Soil	MAANPLSEDDTQTAENWDACWNALESLPGRGLPLIAMHAEAARIINSWRAVTEGRGIEHIEERALVAYRLVADRLAVGSDEHLNRFMVALDGALSVLRQVRWQSPDIPR*
Ga0137416_102085331	3300012927	Vadose Zone Soil	MGSREHLAMAVNLFSEDDTHTVENWDACWNALESLPGGDLPTVVMHAEAARIVNSCRAVTEGRGIEHIEERALAAYRLAADRLAAGSDEHSNRYMVVLDGALS
Ga0137404_118176441	3300012929	Vadose Zone Soil	NPLSEDDTQTAENWDACWNALESLPGRDLPPIAMHAEAVRIINSWRAVTEGRGIEHVEERALVAYRLAADQLAAGSDEHLNRLMVALDGALSVLRRVRWESPARPR*
Ga0137418_103159582	3300015241	Vadose Zone Soil	MGSREHLAMAVNLFSEDDTHTVENWDACWNALESLPGRDLPPIAMHAEAARIINSWRAVTEGRGIEHVEERALVAYRLAADRLAAGSDEHLNRVMVALDGALSVLRKVRRESPDIRDVSSAFRDHFARHLGMISSG*
Ga0066667_100367552	3300018433	Grasslands Soil	MAANPFSEDDIESTENWDACWNALESLPGRDLPPIAMHAEAARIINSWRAVTEGRGIEHIEERALVAYRLVTDRLAAGSDEHLNRFMVALDGALSVLRQVRWQSPDIPR
Ga0193751_10479543	3300019888	Soil	VAANPFSGDDTDSAEKWDACWNALESLPGCDLPTVAMHAEAIRIISSYRAVTEGRGIEHIEDRAQAAYRLGAGRLAAGSDEHLNRFMVALGGALSVLRRVPRESPGSPRSRSPP
Ga0209690_12142131	3300026524	Soil	MAVDLFIKDDTDTAANWDACWNALESLPGRDLPTVVMRAEAARIINSCRAMTEGRGIEHIEERALAAYRLAGDRLAAGADEHLNRFMVALDGALSVLRQVRWESPDSPR
Ga0209180_100562853	3300027846	Vadose Zone Soil	VAANPLSEDDTQTAENWDACWNALESLPGRDLPPIAMHAEAARIINSWRSVTEGRGIEHVEERALVAYRLAADQLAAGSDEHLNRFMVALDGALSVLRQARSESPAIPR
Ga0209701_100964082	3300027862	Vadose Zone Soil	MAVNLFSEDDTHTVENWDACWNALESLPGGDLPTVVMHAEAARIVNSCRAVTEGRGIEHIEERALAAYRLAADRLAAGSDEHLNRLMVALDGALSVLRQVRWESPARPR
Ga0209701_107221321	3300027862	Vadose Zone Soil	VAANPLSEDDTQTAENWDACWNALESLPGRDLPPIAMHAEAARIINSWRSVTEGRGIEHIEERALVAYRLAADQLAAGSDEHLNRFMVALGGALSVLRQVRW
Ga0209283_103174422	3300027875	Vadose Zone Soil	MAVNLFSEDDTHTVENWDACWNALESLPGRDLPTLAMHAEAAGIINSFRAVTEGRGIEHIEERALAAYRLAADRLVAGSDEHLNRLMVALDGALSVLRRVRWESPARPR
Ga0209590_100669442	3300027882	Vadose Zone Soil	MAMNFFGKDDADPAENWDACWNALESLSARDLTTVAMQAEAARIVNSCRTVTEGRGIEYIEERARAVYRLAADRLAASSDEHLTRFIATLDGALTVLRQTP
Ga0209590_101227183	3300027882	Vadose Zone Soil	MAANLFSEEDTHTAENWDACWNALESLPSRDLPVPVMHVEAARIITSFRAVTEGRGIEHVEERALAAYRLAADRLVASSDEHLNRFMVTLDGALSVLRQAR
Ga0209590_103027591	3300027882	Vadose Zone Soil	MAVNLFSEDDTHTVENWDACWNALESLPGGDLPTVVMHAEAARIVNSCRAVTEGRGIEHIEERALAAYRLAADRLAAGSDEHLNRLMVALDGALSVLRRVRWESPARPR
Ga0209590_103065801	3300027882	Vadose Zone Soil	MAVDLFIKDDTDTAANWDACWNALESLPGRDLPTVVMRAEAARIINSCRAMTEGRGIEHIEERALAAYRLAGDRLAAGSDEHSNRFMVVLDGALSVLRQVRWESPDSPR
Ga0209590_104332891	3300027882	Vadose Zone Soil	CWNALESLPGRDLPPIAMHAEAARIVNSWRAVTEGRGIEHVEERALVAYRLAADQLAAGSDEHLNRVMVALDGALSVLRQVRWESPDIP
Ga0209488_101220492	3300027903	Vadose Zone Soil	VAANPLSEDDTQTAENWDACWNALESLPGRDLPPIAMHAEAARIINSWRSVTEGRGIEHIEERALVAYRLAADQLAAGSDEHLNRFMVALHGALSALRQVRWESPDIPR
Ga0137415_101972503	3300028536	Vadose Zone Soil	MAVNLFSEDDTHTVENWDACWNALESLPGGDLPTVVMHAEAARIVNSCRAVTEGRGIEHIEERALAAYRLAGDRLAAGSDEHLNRLMVALDGALSVLRRVRWESPARPR
Ga0137415_114895061	3300028536	Vadose Zone Soil	LSEDDTQTAENWDACWNALESLPGRDLPPIAMHAEAVRIINSWRAVTGGRGIEHVEERALVAYRLAADQLAAGSDEHLNRVMVALDGALSVLRQVRWGSPDIP
Ga0307477_106908652	3300031753	Hardwood Forest Soil	MAANHFSEDDTHTAENWDACWNALESLPGRDLPTVAMHAEAARIINSCRAMTEGRGIEHIAERALAAYQLAADRLAAGSDERLNRFMVALDGALSVLRQVRWQSPDIPR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F071055

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences