Metagenome / Metatranscriptome Family F070927

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F070927
Family Type	Metagenome / Metatranscriptome
Number of Sequences	122
Average Sequence Length	58 residues
Representative Sequence	MSENINEIILKDETDPTDVEGHYLPLDDEGNVDFTPHRDADEDVEGHVLDLDIERKR
Number of Associated Samples	70
Number of Associated Scaffolds	122

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	51.64 %
% of genes near scaffold ends (potentially truncated)	50.82 %
% of genes from short scaffolds (< 2000 bps)	91.80 %
Associated GOLD sequencing projects	63
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.25

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (66.393 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere (16.393 % of family members)
Environment Ontology (ENVO)	Unclassified (39.344 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (64.754 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 4.71% β-sheet: 2.35% Coil/Unstructured: 92.94%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.25
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.25
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 122 Family Scaffolds
PF13180	PDZ_2	36.07
PF13365	Trypsin_2	14.75
PF04055	Radical_SAM	4.10
PF00027	cNMP_binding	1.64
PF13191	AAA_16	0.82
PF07690	MFS_1	0.82
PF04655	APH_6_hur	0.82
PF13602	ADH_zinc_N_2	0.82
PF10066	DUF2304	0.82

COG ID	Name	Functional Category	% Frequency in 122 Family Scaffolds
COG3570	Streptomycin 6-kinase	Defense mechanisms [V]	0.82

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.39 %
All Organisms	root	All Organisms	33.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.39 %
cellular organisms	root	All Organisms → cellular organisms	33.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.39 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	33.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.39 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	28.69 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.82 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.39 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	18.03 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.82 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.39 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	16.39 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.82 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.39 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	9.02 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	3.28 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.82 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.82 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.39 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	9.02 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	3.28 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.82 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.82 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.39 %
Nocardioides	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	9.02 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	3.28 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.82 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.82 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.39 %
unclassified Nocardioides	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides	4.10 %
Streptomyces guryensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces guryensis	3.28 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.82 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.82 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.39 %
Nocardioides sp. TF02-7	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. TF02-7	4.10 %
Streptomyces guryensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces guryensis	3.28 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.82 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.82 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.82 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002568\|C688J35102_119677832	All Organisms → cellular organisms → Bacteria	747	Open in IMG/M
3300003321\|soilH1_10172287	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2589	Open in IMG/M
3300003544\|Ga0007417J51691_1020356	Not Available	629	Open in IMG/M
3300003572\|Ga0007424J51698_1009687	All Organisms → cellular organisms → Bacteria → Terrabacteria group	749	Open in IMG/M
3300003575\|Ga0007409J51694_1020370	Not Available	534	Open in IMG/M
3300003577\|Ga0007416J51690_1039416	Not Available	559	Open in IMG/M
3300003693\|Ga0032354_1095487	Not Available	535	Open in IMG/M
3300004081\|Ga0063454_100052956	Not Available	1632	Open in IMG/M
3300004081\|Ga0063454_101086191	Not Available	652	Open in IMG/M
3300004114\|Ga0062593_102885889	Not Available	549	Open in IMG/M
3300004114\|Ga0062593_103033726	Not Available	537	Open in IMG/M
3300004153\|Ga0063455_101396435	Not Available	540	Open in IMG/M
3300004157\|Ga0062590_101421670	Not Available	691	Open in IMG/M
3300004479\|Ga0062595_100680073	All Organisms → cellular organisms → Bacteria → Terrabacteria group	821	Open in IMG/M
3300004785\|Ga0058858_1351128	All Organisms → cellular organisms → Bacteria → Terrabacteria group	750	Open in IMG/M
3300004799\|Ga0058863_10085369	Not Available	792	Open in IMG/M
3300004800\|Ga0058861_10046720	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. TF02-7	925	Open in IMG/M
3300004800\|Ga0058861_10052172	Not Available	739	Open in IMG/M
3300004800\|Ga0058861_10094931	Not Available	617	Open in IMG/M
3300004800\|Ga0058861_12073197	Not Available	534	Open in IMG/M
3300004803\|Ga0058862_10000194	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. TF02-7	532	Open in IMG/M
3300004803\|Ga0058862_10027044	Not Available	592	Open in IMG/M
3300005329\|Ga0070683_101483489	Not Available	652	Open in IMG/M
3300005332\|Ga0066388_100557937	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1774	Open in IMG/M
3300005337\|Ga0070682_101159630	Not Available	650	Open in IMG/M
3300005347\|Ga0070668_101592604	Not Available	598	Open in IMG/M
3300005456\|Ga0070678_101216232	Not Available	699	Open in IMG/M
3300005458\|Ga0070681_10659031	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	962	Open in IMG/M
3300005458\|Ga0070681_11380059	Not Available	628	Open in IMG/M
3300005548\|Ga0070665_100004410	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	14788	Open in IMG/M
3300005564\|Ga0070664_102244478	Not Available	518	Open in IMG/M
3300006931\|Ga0097620_102196166	Not Available	609	Open in IMG/M
3300009176\|Ga0105242_11493657	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	706	Open in IMG/M
3300009553\|Ga0105249_12723961	Not Available	566	Open in IMG/M
3300009789\|Ga0126307_10443352	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1048	Open in IMG/M
3300009840\|Ga0126313_11320584	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. TF02-7	596	Open in IMG/M
3300010041\|Ga0126312_11387907	Not Available	521	Open in IMG/M
3300010042\|Ga0126314_11116507	Not Available	587	Open in IMG/M
3300010044\|Ga0126310_10002154	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	7890	Open in IMG/M
3300010044\|Ga0126310_10023096	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3149	Open in IMG/M
3300010045\|Ga0126311_10230735	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1365	Open in IMG/M
3300010146\|Ga0126320_1174721	Not Available	608	Open in IMG/M
3300010152\|Ga0126318_10807055	Not Available	625	Open in IMG/M
3300010152\|Ga0126318_11066446	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. TF02-7	554	Open in IMG/M
3300010362\|Ga0126377_10167759	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	2077	Open in IMG/M
3300011332\|Ga0126317_10242102	Not Available	738	Open in IMG/M
3300011332\|Ga0126317_10362695	Not Available	586	Open in IMG/M
3300011332\|Ga0126317_10691631	Not Available	762	Open in IMG/M
3300011332\|Ga0126317_10824861	Not Available	501	Open in IMG/M
3300011332\|Ga0126317_10897891	Not Available	620	Open in IMG/M
3300012212\|Ga0150985_100169400	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	1303	Open in IMG/M
3300012212\|Ga0150985_100608354	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces guryensis	840	Open in IMG/M
3300012212\|Ga0150985_103095674	Not Available	606	Open in IMG/M
3300012212\|Ga0150985_106062078	All Organisms → cellular organisms → Bacteria → Terrabacteria group	954	Open in IMG/M
3300012212\|Ga0150985_108804959	Not Available	758	Open in IMG/M
3300012212\|Ga0150985_109181657	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces guryensis	771	Open in IMG/M
3300012212\|Ga0150985_109545785	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	1404	Open in IMG/M
3300012212\|Ga0150985_110983838	Not Available	1032	Open in IMG/M
3300012212\|Ga0150985_111519661	Not Available	624	Open in IMG/M
3300012212\|Ga0150985_111724753	Not Available	513	Open in IMG/M
3300012212\|Ga0150985_111846843	All Organisms → cellular organisms → Bacteria	659	Open in IMG/M
3300012212\|Ga0150985_114375275	Not Available	861	Open in IMG/M
3300012212\|Ga0150985_118102958	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces guryensis	836	Open in IMG/M
3300012212\|Ga0150985_118199433	Not Available	742	Open in IMG/M
3300012212\|Ga0150985_120124753	Not Available	590	Open in IMG/M
3300012212\|Ga0150985_121569799	Not Available	675	Open in IMG/M
3300012469\|Ga0150984_101202071	Not Available	587	Open in IMG/M
3300012469\|Ga0150984_101376868	Not Available	865	Open in IMG/M
3300012469\|Ga0150984_105914560	Not Available	560	Open in IMG/M
3300012469\|Ga0150984_106543443	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1900	Open in IMG/M
3300012469\|Ga0150984_111575524	All Organisms → cellular organisms → Bacteria → Terrabacteria group	926	Open in IMG/M
3300012469\|Ga0150984_113293843	Not Available	647	Open in IMG/M
3300012469\|Ga0150984_115424251	Not Available	580	Open in IMG/M
3300012469\|Ga0150984_115959734	Not Available	624	Open in IMG/M
3300012469\|Ga0150984_118257876	All Organisms → cellular organisms → Bacteria → Terrabacteria group	706	Open in IMG/M
3300012469\|Ga0150984_119884815	All Organisms → cellular organisms → Bacteria → Terrabacteria group	821	Open in IMG/M
3300012469\|Ga0150984_120831555	Not Available	785	Open in IMG/M
3300012469\|Ga0150984_121207048	All Organisms → cellular organisms → Bacteria → Terrabacteria group	795	Open in IMG/M
3300012469\|Ga0150984_123676957	Not Available	601	Open in IMG/M
3300012943\|Ga0164241_10133115	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces guryensis	1781	Open in IMG/M
3300012943\|Ga0164241_10392387	Not Available	995	Open in IMG/M
3300012943\|Ga0164241_10578391	Not Available	811	Open in IMG/M
3300012943\|Ga0164241_11434121	Not Available	508	Open in IMG/M
3300012958\|Ga0164299_10644144	Not Available	732	Open in IMG/M
3300013105\|Ga0157369_11888964	Not Available	606	Open in IMG/M
3300014497\|Ga0182008_10528959	Not Available	652	Open in IMG/M
3300015373\|Ga0132257_104277860	Not Available	519	Open in IMG/M
3300020069\|Ga0197907_10054397	Not Available	506	Open in IMG/M
3300020069\|Ga0197907_11039738	Not Available	555	Open in IMG/M
3300020070\|Ga0206356_10360526	Not Available	722	Open in IMG/M
3300020070\|Ga0206356_11187645	Not Available	515	Open in IMG/M
3300020076\|Ga0206355_1511391	Not Available	513	Open in IMG/M
3300020077\|Ga0206351_10626242	Not Available	500	Open in IMG/M
3300020078\|Ga0206352_10110494	Not Available	684	Open in IMG/M
3300020080\|Ga0206350_10666952	Not Available	547	Open in IMG/M
3300020080\|Ga0206350_11026385	Not Available	590	Open in IMG/M
3300020081\|Ga0206354_11107134	Not Available	559	Open in IMG/M
3300021384\|Ga0213876_10112785	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1443	Open in IMG/M
3300021445\|Ga0182009_10130764	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1176	Open in IMG/M
3300021951\|Ga0222624_1120418	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. TF02-7	592	Open in IMG/M
3300022467\|Ga0224712_10624475	Not Available	527	Open in IMG/M
3300025901\|Ga0207688_10075582	All Organisms → cellular organisms → Bacteria	1917	Open in IMG/M
3300025908\|Ga0207643_10464539	Not Available	806	Open in IMG/M
3300025912\|Ga0207707_11607717	Not Available	512	Open in IMG/M
3300025927\|Ga0207687_10560029	Not Available	960	Open in IMG/M
3300025932\|Ga0207690_11779506	All Organisms → cellular organisms → Bacteria → Proteobacteria	514	Open in IMG/M
3300025934\|Ga0207686_10289923	Not Available	1211	Open in IMG/M
3300025938\|Ga0207704_10825749	Not Available	775	Open in IMG/M
3300025944\|Ga0207661_10063329	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	2995	Open in IMG/M
3300025986\|Ga0207658_10928486	All Organisms → cellular organisms → Bacteria → Terrabacteria group	793	Open in IMG/M
3300028379\|Ga0268266_10152748	Not Available	2082	Open in IMG/M
3300028379\|Ga0268266_10216913	Not Available	1757	Open in IMG/M
3300030989\|Ga0308196_1029067	Not Available	687	Open in IMG/M
3300030993\|Ga0308190_1060501	Not Available	754	Open in IMG/M
3300031093\|Ga0308197_10231711	Not Available	646	Open in IMG/M
3300031938\|Ga0308175_100088820	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2812	Open in IMG/M
3300031938\|Ga0308175_100164275	Not Available	2145	Open in IMG/M
3300031938\|Ga0308175_100664598	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1128	Open in IMG/M
3300031938\|Ga0308175_102648443	Not Available	561	Open in IMG/M
3300031996\|Ga0308176_10001563	All Organisms → cellular organisms → Bacteria	14400	Open in IMG/M
3300031996\|Ga0308176_11668503	Not Available	680	Open in IMG/M
3300031996\|Ga0308176_12350842	Not Available	569	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	50.82%
Environmental	Environmental	49.18%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	44.26%
Terrestrial	Environmental → Terrestrial	41.80%
Aquatic	Environmental → Aquatic	7.38%
Human	Host-Associated → Human	6.56%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	41.80%
Rhizosphere	Host-Associated → Plants → Rhizosphere	22.13%
Rhizoplane	Host-Associated → Plants → Rhizoplane	21.31%
Freshwater	Environmental → Aquatic → Freshwater	7.38%
Digestive System	Host-Associated → Human → Digestive System	6.56%
Roots	Host-Associated → Plants → Roots	0.82%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	32.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	17.21%
Soil	Host-Associated → Plants → Rhizosphere → Soil	17.21%
Loam	Environmental → Terrestrial → Soil → Loam	9.02%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	6.56%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	6.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.92%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.28%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.82%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.82%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.82%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.95%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	17.21%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	17.21%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	6.56%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	6.56%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	5.74%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.92%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.10%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	3.28%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.28%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.82%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.82%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.82%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.82%

Habitat	Taxonomy	Distribution
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	16.39%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	11.48%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	9.02%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	6.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.56%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	6.56%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	5.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	5.74%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	4.92%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	4.10%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.28%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	3.28%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.46%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.64%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.64%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.82%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.82%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.82%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.82%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.82%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.82%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.82%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.82%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.82%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.82%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.82%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003321	Sugarcane bulk soil Sample H1	Environmental	Open in IMG/M
3300003544	Grassland soil microbial communities from Hopland, California, USA - Sample H2_Rhizo_33 (Metagenome Metatranscriptome, Counting Only)	Host-Associated	Open in IMG/M
3300003572	Grassland soil microbial communities from Hopland, California, USA - Sample H3_Bulk_40 (Metagenome Metatranscriptome, Counting Only)	Host-Associated	Open in IMG/M
3300003575	Grassland soil microbial communities from Hopland, California, USA - Sample H1_Rhizo_25 (Metagenome Metatranscriptome, Counting Only)	Host-Associated	Open in IMG/M
3300003577	Grassland soil microbial communities from Hopland, California, USA - Sample H2_Rhizo_32 (Metagenome Metatranscriptome, Counting Only)	Host-Associated	Open in IMG/M
3300003693	Avena fatua rhizosphere microbial communities - H2_Rhizo_Litter_49 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004785	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300004799	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-3 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300004800	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300004803	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300006931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2)	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010146	Soil microbial communities from California, USA to study soil gas exchange rates - JR-CA-SND metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010152	Soil microbial communities from Oklahoma, USA to study soil gas exchange rates - GP-OK-ARM metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300011332	Soil microbial communities from California, USA to study soil gas exchange rates - SR-CA-SC2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012943	Backyard soil microbial communities from Emeryville, California, USA - Original compost - Back yard soil (BY)	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300020069	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020070	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020076	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v3)	Environmental	Open in IMG/M
3300020077	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020080	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020081	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300021384	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9	Host-Associated	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300021951	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022467	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300030989	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_197 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030993	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_185 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031093	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
C688J35102_1196778321	3300002568	Soil	TTENIVLRDETDPTDVEGHFLPLDDEGNVDFDPHREGDDVEGHVLDLDIERKR*
soilH1_101722871	3300003321	Sugarcane Root And Bulk Soil	MSENINEFVLRDETDPADVEGHYLPLDDEGNVDFTPRRDEDDVEGHVLDLDIERKR*
Ga0007417J51691_10203561	3300003544	Avena Fatua Rhizosphere	HQGRQIMSENINETVPEDETDLPDVEGHYLPLDDEGNAEFGPRKDSAEDVEGHVLDLDIERKR*
Ga0007424J51698_10096871	3300003572	Avena Fatua Rhizosphere	TGAECRQTHHQGRQIMSENINETVPEDETDLPDVEGHYLPLDDEGNAEFGPRKDSAEDVEGHVLDLDIERKR*
Ga0007409J51694_10203701	3300003575	Avena Fatua Rhizosphere	NTNEIILKDETDPTDVEGHYLPLDDEGNVDFTPHRDADEDVEGHVLDLDIERKR*
Ga0007416J51690_10394161	3300003577	Avena Fatua Rhizosphere	TVPEDETDLPDVEGHYLPLDDEGNAEFGPRKDSAEDVEGHVLDLDIERKR*
Ga0032354_10954871	3300003693	Avena Fatua Rhizosphere	EDETDLPDVEGHYLPLDDEGNAEFGPRKDSAEDVEGHVLDLDIERKR*
Ga0063454_1000529561	3300004081	Soil	MSENINEIILKDETDPADVEGHFLPLDDEGNVDFTPLRDAGDDADVEGHVLD
Ga0063454_1010861911	3300004081	Soil	MSENTNEIILKDETDPTDVEGHYLPLDEDGNVDFAPHKHPQDTSDDVEGHVLDLDIERRR
Ga0062593_1028858891	3300004114	Soil	MSENINEIILSDETDPTDVEGHYLPLDEEGNVDFTPHKDLPETDDVEGHVLDLDIER
Ga0062593_1030337261	3300004114	Soil	MTENINEIILDDETDPTDVEGHYLPLDDEGNVDFTPHRDLPDIDDDVEGHVLDLDIERKR
Ga0063455_1013964352	3300004153	Soil	DPTDVEGHYLPLDDEGNVDFTPHRDADEDVEGHVLDLDIERKR*
Ga0062590_1014216703	3300004157	Soil	MSENINEIILSDETDPTDVEGHYLPLDEEGNVDFTPHKDLPETDDVEGHVLDLDIERKR*
Ga0062595_1006800732	3300004479	Soil	MSENTTENIVLKDETDPTDVEGHYLPLDDEGNVNFTPLKNAADDVEGHVLDLDIERKR*
Ga0058858_13511282	3300004785	Host-Associated	LKDETDPTDVEGHYLPLDDEGNVNFTPLKNAADDVEGHVLDLDIERKR*
Ga0058863_100853691	3300004799	Host-Associated	MSENTSENIVLRDETDPSDVQGHYLPLDDEGNVDYAPHREGDDVEGHVLDLDIERKR*
Ga0058861_100467202	3300004800	Host-Associated	MSENINEIILKDETDPTDVEGHYLPLDDEGNVDFAPHKDATEDVEGHVLDLDIERKR*
Ga0058861_100521722	3300004800	Host-Associated	QIMSENINEIILSDETDPTDVEGHYLPLDEEGNVDFTPHKDLPETDDDVEGHVLDLDIERKR*
Ga0058861_100949312	3300004800	Host-Associated	TMSENTTENIVLKDETDPTDVEGHYLPLDDEGNVDFAPHREDDDDVEGHVLDLDIERKR*
Ga0058861_120731972	3300004800	Host-Associated	TMSENTTENIVFRDETDPADVEGHYLPLDDEGNVDFAPHREDDEDDVEGHVLDLDIERKR
Ga0058862_100001942	3300004803	Host-Associated	TNEIILKDETDPTDVEGHYLPLDDEGNVDFAPHKDATEDVEGHVLDLDIERKR*
Ga0058862_100270442	3300004803	Host-Associated	QIMSENINEIILSDETDPTDVEGHYLPLDEEGNVDFTPHKDLPETDDVEGHVLDLDIERKR*
Ga0070683_1014834893	3300005329	Corn Rhizosphere	MSENTSENIVLRDETDPSDVQGHYLPLDDEGNVDYAPHREGDDVEGHV
Ga0066388_1005579372	3300005332	Tropical Forest Soil	MSENMSENINEIILRDETDPTDVEGHFLPLDDEGNPEVTPLKGLSEDVEGHVLDLDIERKR*
Ga0070682_1011596302	3300005337	Corn Rhizosphere	MSENTNEIILKDETDPTDVEGHYLPLDDEGNVDFTPHRDADEDVEGHVLDLDIE
Ga0070668_1015926043	3300005347	Switchgrass Rhizosphere	MSENTNEIILKDETDPTDVEGHYLPLDDEGNVDFTPHRDADEDVEGH
Ga0070678_1012162321	3300005456	Miscanthus Rhizosphere	MSENINEIVLKDETDPTDVEGHYLPLDDEGNVNFTPLKNAADDVEGHVLDLDIERKR*
Ga0070681_106590312	3300005458	Corn Rhizosphere	MSENTTENIVLKDETDPTDVEGHYLPLDDEGNVDFAPHREDDDDVEGHVLDLDIERKR*
Ga0070681_113800591	3300005458	Corn Rhizosphere	MSENTSENIVLRDETDPSDVQGHYLPLDDEGNVDYAPHREGDDVEGHVLDLD
Ga0070665_10000441010	3300005548	Switchgrass Rhizosphere	MSENTTENIVLKDETDPADVQGHYLPLDDEGNVDFAPHREDDDDVEGHVLDLDIERKR*
Ga0070664_1022444782	3300005564	Corn Rhizosphere	MSENINEIVLKDETDPTDVEGHYLPLDDEGNVDFTPHRDADEDVEGHVLDLDIERKR*
Ga0097620_1021961661	3300006931	Switchgrass Rhizosphere	MSENTNEIILKDETDPTDVEGHYLPLDDEGNVDFTPHRDADEDVEGHVLDLDIERKR*
Ga0105242_114936572	3300009176	Miscanthus Rhizosphere	MSENINEIILKDETDPTDVEGHYLPLDDEGNVDFTPHRDADEDVEGHVLDLDIERKR*
Ga0105249_127239612	3300009553	Switchgrass Rhizosphere	MSENTNEIILKDETDPTDVEGHYLPLDDEGNVDFTPHRDADEDVEGRVLDLDIERKR*
Ga0126307_104433522	3300009789	Serpentine Soil	MSENINETVLKDETDPTDVEGHYLPLDDEGNVDFTPHKESEEDVEGHVLDLDIERKR*
Ga0126313_113205842	3300009840	Serpentine Soil	MIEFHAASEGEKIMSENTNEIILKDETDPTDVEGHYLPLDDEGNVDFTPHRDPHDGSEDVEGHVLDLDIERKR*
Ga0126312_113879072	3300010041	Serpentine Soil	MSENINETILNDESDPTDVEGHYLPLDEDGNVDFAPHKESEEDVEGHVLDLDIERKR*
Ga0126314_111165071	3300010042	Serpentine Soil	MSENINETILKDETDPTDVEGHYLPLDEDGNVDFAPHKESEEDVEGHVLDLDIERKR*
Ga0126310_100021543	3300010044	Serpentine Soil	MRSRARARENRIMSENVNETDPTDVEGHYLPMDDEGNVEFTPQKESAEDVEGHVLDLDIERKR*
Ga0126310_100230962	3300010044	Serpentine Soil	MSENINETILNDETDPTDVEGHYLPLDEDGNVDFAPHKESEEDVEGHVLDLDIERKR*
Ga0126311_102307352	3300010045	Serpentine Soil	MSENINETILNDETDPTDVEGHYLPLDEDGNVDFAPHKESEEDV
Ga0126320_11747211	3300010146	Soil	MSENINEIVLKDETDPTDVEGHYLPLDDEGNVDFAPAREGDDVEGHVLDLDIERKR*
Ga0126318_108070552	3300010152	Soil	MSENINEFILKDETDPADVEGHFLPLDDEGNVDFTPHRETGEDVEGHVLDLDIERKR*
Ga0126318_110664462	3300010152	Soil	WERTRAMSENINEYIPRDETDPADVEGHFLPLDDEGNVDFTPRRDEDDDVEGHVLDLDIERKR*
Ga0126377_101677593	3300010362	Tropical Forest Soil	IVSHAAPREQIMSENTNEIILKDETDPTDVEGHYLPLDDEGNVDFTPHKDTIEDVEGHVLDLDIERKR*
Ga0126317_102421022	3300011332	Soil	MIDSHAASEGEQIMSENTNEIILKDETDPTDVEGHYLPLDDEGNVDFTPHRDPQDGSEDVEGHVLDLDIERKR*
Ga0126317_103626952	3300011332	Soil	ENTTENIVLRDETDPTDVEGHFLPLDDEGNVDFAPHREDEDDVEGHVLDLDIERKR*
Ga0126317_106916312	3300011332	Soil	MSENINETVPEDETDLPDVEGHYLPLDDEGNAEFGPRKDSAEDVEGHVLDLDIERKR*
Ga0126317_108248611	3300011332	Soil	QIMSENTNEIILKDETDPTDVEGHYLPLDDEGNVDFVPTKDATEDVEGHVLDLDIERKR*
Ga0126317_108978911	3300011332	Soil	HRGRQIMSENINEIILSDETDPTDVEGHYLPLDEEGNVDFTPHKDLPETDDVEGHVLDLDIERKR*
Ga0150985_1001694001	3300012212	Avena Fatua Rhizosphere	ETESTDVEGHYLPLDDEGNADVTPHKDSAEDVEGHVLDLDVERKR*
Ga0150985_1006083541	3300012212	Avena Fatua Rhizosphere	TEGDKIMSENTNEIILKDETDPTDVEGHYLPLDEDGNVDFAPHKHPQDTSDDVEGHVLDLDIERRR*
Ga0150985_1030956742	3300012212	Avena Fatua Rhizosphere	MSENINETFLKEETDPTDVEGHYLPLDDEGNVDFAPQKESAEDVEGHVLDLDIERKR*
Ga0150985_1060620782	3300012212	Avena Fatua Rhizosphere	MSENINEPVLEDETDPADVEGHYLPLDDEGNVDFSPAKQSVEDVEGHVLDLDIERKR*
Ga0150985_1088049591	3300012212	Avena Fatua Rhizosphere	QGEDEAMSENINEIILKDETDPADVEGHFLPLDDEGNVDFTPLRDAGDDADVEGHVLDLDIERKR*
Ga0150985_1091816572	3300012212	Avena Fatua Rhizosphere	EGEQIMSENINEIILKDETDPTDVEGHYLPLDDEGNVDFAPAKDAAEDVEGHVLDLDIERKR*
Ga0150985_1095457853	3300012212	Avena Fatua Rhizosphere	MSENTTENIVLRDETDPTDVEGHFLPLDDEGNVDFDPHREGDDVEGHVLDLDIERKR*
Ga0150985_1109838382	3300012212	Avena Fatua Rhizosphere	MSENTNEIILKDETDPTDVEGHYLPLDDEGNVDFVPTKDATEDVEGHVLDLDIERKR*
Ga0150985_1115196612	3300012212	Avena Fatua Rhizosphere	HRGRQIMSENINEIILSDETDPTDVEGHYLPLDEEGNVDFTPHKDLPGTDDDVEGHVLDLDIERKR*
Ga0150985_1117247531	3300012212	Avena Fatua Rhizosphere	KDETDPTDVEGHYLPLDDEGNVDFTPHRDADEDVEGHVLDLDIERKR*
Ga0150985_1118468431	3300012212	Avena Fatua Rhizosphere	TKGEQIMSENINETFLAEETDPADVEGHYLPLDDEGNVDFTPAKESAEDVEGHVLDLDIERKR*
Ga0150985_1143752751	3300012212	Avena Fatua Rhizosphere	RERNRPMSENINEIILKDETDPTDVEGHFLPLDDEGNVEFSPLRDAGEDVEGHVLDLDIERKR*
Ga0150985_1181029581	3300012212	Avena Fatua Rhizosphere	TEGEQTMSENTNEIILKDETDPTDVEGHYLPLDDDGNVDFTPHKDAAEDVEGHVLDLDIERKR*
Ga0150985_1181994332	3300012212	Avena Fatua Rhizosphere	NEIILSDETDPTDVEGHYLPLDEEGNVDFTPHKDLPETDDVEGHVLDLDIERKR*
Ga0150985_1201247532	3300012212	Avena Fatua Rhizosphere	MSENINEIILKDETDPADVEGHFLPLDDEGNVDFSPLRDTDDVEGHVLDLDIERKR*
Ga0150985_1215697992	3300012212	Avena Fatua Rhizosphere	MSENITEIILKDETDPTDVEGHYLPLDDEGNVEFAPTKDATEDVEGHVLDLDIERKR*
Ga0150984_1012020712	3300012469	Avena Fatua Rhizosphere	DGRETMSENTTENIVLRDETDPTDVEGHFLPLDDEGNVDFAPHREDEDDVEGHVLDLDIERKR*
Ga0150984_1013768682	3300012469	Avena Fatua Rhizosphere	SENINEIILSDETDPTDVEGHYLPLDEEGNVDFTPHKDLPGTDDDVEGHVLDLDIERKR*
Ga0150984_1059145602	3300012469	Avena Fatua Rhizosphere	SDLKGEQIMSENINETFLAEEPAPADVEGHYLPLDDEGNVDFTPAKESAEDVEGHVLDLDIERKR*
Ga0150984_1065434433	3300012469	Avena Fatua Rhizosphere	MSENINETVPEDETDLPDVEGHYLPLDDEGNAEFGPRKDSTEDVEGHVLDLDIERKR*
Ga0150984_1115755241	3300012469	Avena Fatua Rhizosphere	PTDVEGHYLPLDEDGNVDFAPHKHPQDTSDDVEGHVLDLDIERRR*
Ga0150984_1132938431	3300012469	Avena Fatua Rhizosphere	SRGEQIMSENINEIVLNEETDPTDVEGHFLPLDDEGNVDFTPHRDGDDDDVEGHVLDLDIERKR*
Ga0150984_1154242511	3300012469	Avena Fatua Rhizosphere	ASEGEQIMSENTNEIILKDETDPTDVEGHYLPLDDEGNVDFVPTKDATEDVEGHVLDLDIERKR*
Ga0150984_1159597341	3300012469	Avena Fatua Rhizosphere	MSENINEIILKDETDPADVEGHFLPLDDEGNVDFIATRDTDTHADTEDVEGHVLDLDIERKR*
Ga0150984_1182578762	3300012469	Avena Fatua Rhizosphere	SSDLGEQIMSENINETVLGDETESTDVEGHYLPLDDEGNADVTPHKDSAEDVEGHVLDLDVERKR*
Ga0150984_1198848151	3300012469	Avena Fatua Rhizosphere	LKDETDPTDVEGHYLPLDDDGNVDFTPHKDAAEDVEGHVLDLDIERKR*
Ga0150984_1208315552	3300012469	Avena Fatua Rhizosphere	MSENINEIILKDETDPTDVEGHFLPLDDEGNVEFSPLRDAGEDVEGHVLDLDIERKR*
Ga0150984_1212070481	3300012469	Avena Fatua Rhizosphere	TKGEQIMSENINEPVLEDETDPADVEGHYLPLDDEGNVDFSPAKQSVEDVEGHVLDLDIERKR*
Ga0150984_1236769571	3300012469	Avena Fatua Rhizosphere	DETDPTDVEGHYLPLDDEGNVDFAPHREGDDVEGHVLDLDIERKR*
Ga0164241_101331152	3300012943	Soil	MSENTTENIVFRDETDPADVEGHYLPLDDEGNVDFAPHREADEGDVEGHVLDLDIERKR*
Ga0164241_103923873	3300012943	Soil	MSENINEIILGDETDPTDVEGHYLPLDNDGNVDFTPRKDLPATDDDVEGHVLDLDIERKR
Ga0164241_105783912	3300012943	Soil	MRSQAPPREDIMNENTTENIVFRDETAPADVEGHYLPLDDEGNVDFAPHREDDEDDVEGHVLDLDIERKR*
Ga0164241_114341212	3300012943	Soil	MIESHAASEGEQIMSENINEIILKDETDPTDVEGHYLPLDDEGNVDFTPHRDPQDGSEDVEGHVLDLDIERKR*
Ga0164299_106441441	3300012958	Soil	MSENINEIILKDETDPADVEGHFLPLDDEGNVDFTPLRDAGDDDDVEGHVLDLDIERKR*
Ga0157369_118889641	3300013105	Corn Rhizosphere	TRSTEGEQIMSENINEIVLKDETDPTDVEGHYLPLDDEGNVNFTPLKNAADDVEGHVLDLDIERKR*
Ga0182008_105289592	3300014497	Rhizosphere	DPTDVEGHYLPLDDDGNVDFAPHKDATEDVEGHVLDLDIERKR*
Ga0132257_1042778601	3300015373	Arabidopsis Rhizosphere	QHRGSTEGEQTMSENINEIILKDETDPTDVEGHYLPLDDEGNVDFVPHKDLTEDVEGHVLDLDIERKR*
Ga0197907_100543971	3300020069	Corn, Switchgrass And Miscanthus Rhizosphere	MSENTTENIVLKDETDPTDVEGHYLPLDDEGNVDFAPHREDDDDVEGHVLDLDIERKR
Ga0197907_110397381	3300020069	Corn, Switchgrass And Miscanthus Rhizosphere	MSENTSENIVLRDETDPSDVQGHYLPLDDEGNVDYAPHREGDDVEGHVLDLDIERKR
Ga0206356_103605262	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	MSENINEIVLKDETDPTDVEGHFLPLDDEGNVDYTPRREGDDVEGHVLDLDIERKR
Ga0206356_111876451	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	MSENINEIVLKDETDPTDVEGHYLPLDDEGNVNFTPLKNAADDVEGHVLDLDIECKR
Ga0206355_15113911	3300020076	Corn, Switchgrass And Miscanthus Rhizosphere	RESRVMSENINEIVLKDETDPTDVEGHFLPLDDEGNVDYTPRREGDDVEGHVLDLDIERK
Ga0206351_106262421	3300020077	Corn, Switchgrass And Miscanthus Rhizosphere	RGREIMSENTNEIILKDETDPTDVEGHYLPLDDEGNVDFAPHREDDDDVEGHVLDLDIERKR
Ga0206352_101104941	3300020078	Corn, Switchgrass And Miscanthus Rhizosphere	MSENTSENIVLRDEIDPSDVQGHYLPLDDEGNVDYAPHREGDDVEGHVLDLDIERKR
Ga0206350_106669521	3300020080	Corn, Switchgrass And Miscanthus Rhizosphere	TEGEQIMSENINEIVLKDETDPTDVEGHYLPLDDEGNVNFTPLKNAADDVEGHVLDLDIERKR
Ga0206350_110263852	3300020080	Corn, Switchgrass And Miscanthus Rhizosphere	GEQTMSENTTENIVLKDETDPTDVEGHYLPLDDEGNVDFAPHREDDDDVEGHVLDLDIERKR
Ga0206354_111071342	3300020081	Corn, Switchgrass And Miscanthus Rhizosphere	RIMSENINEIVLKDETDPTDVEGHFLPLDDEGNVDYTPRREGDDVEGHVLDLDIERKR
Ga0213876_101127852	3300021384	Plant Roots	MSENTGENTSENIVFHGETDPSDVEGHYLPLDDEGNVDFSPHRDEDDVEGHVLDLDIERK
Ga0182009_101307642	3300021445	Soil	MSENINEIILKDETDPTDVEGHYLPLDDEGNVDFTPHKDTEDVEGHVLDLDIERKR
Ga0222624_11204181	3300021951	Groundwater Sediment	TEGEQIMSENINEIILKDETDPTDVEGHYLPLDDEGNVDFTPHKDADEDVEGHVLDLDIERKR
Ga0224712_106244751	3300022467	Corn, Switchgrass And Miscanthus Rhizosphere	MSENINEIILKDETDPADVEGHFLPLDDEGNVDFTPLRDAGDDDDVEGHVLDLDIERKR
Ga0207688_100755822	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MSENINEIVLKDETDPTDVEGHYLPLDDEGNVNFTPLKNAADDVEGHVLDLDIERKR
Ga0207643_104645392	3300025908	Miscanthus Rhizosphere	MSENINEIVLKDETDPTDVEGHYLPLDDEGNVDFTPHRDADEDVEGHVLDLDIERKR
Ga0207707_116077171	3300025912	Corn Rhizosphere	MSENINEIILSDETDPTDVEGHYLPLDEEGNVDFTPHKDLPETDDVEGHVLDLDIERKR
Ga0207687_105600293	3300025927	Miscanthus Rhizosphere	MSENTNEIILKDETDPTDVEGHYLPLDDEGNVDFTPHRDADEDVEG
Ga0207690_117795061	3300025932	Corn Rhizosphere	MSENINEIILKDETDPTDVEGHYLPLDDEGNVDFTPHRDADEDVEGHVLDLDIERKR
Ga0207686_102899231	3300025934	Miscanthus Rhizosphere	MSENINEIILKDETDPTDVEGHYLPLDDEGNVDFTPHRDADEDVDGHVLDLDIERKR
Ga0207704_108257491	3300025938	Miscanthus Rhizosphere	MSENTNEIILKDETDPTDVEGHYLPLDDEGNVNFTPLKNAADDVEGHVLDLDIERKR
Ga0207661_100633293	3300025944	Corn Rhizosphere	MSENINDIVLKDETDPTDVEGHFLPLDDEGNVDYTPRREGDDVEGHVLDLDIERKR
Ga0207658_109284862	3300025986	Switchgrass Rhizosphere	GREIMSENTNEIILKDETDPTDVEGHYLPLDDEGNVDFTPHRDADEDVEGHVLDLDIERK
Ga0268266_101527482	3300028379	Switchgrass Rhizosphere	MSENTTENIVLKDETDPADVQGHYLPLDDEGNVDFAPHREDDDDVEGHVLDLDIERKR
Ga0268266_102169132	3300028379	Switchgrass Rhizosphere	MSENTNEIILKDETDPTDVEGHYLPLDDEGNVDFTPHRDADEDVEGHVLDLDIERKR
Ga0308196_10290671	3300030989	Soil	MSENTTENIVLKDETDPTDVEGHYLPLDDEGNVDFTPHKDADEDVEGHVLDLDIERKR
Ga0308190_10605012	3300030993	Soil	MSENINEIILKDETDPADVEGHFLPLDDEGNVDFAAIRDTDTDSDSEDVEGHVLDLDIERKR
Ga0308197_102317111	3300031093	Soil	EGEQIMSENINEIILKDETDPTDVEGHYLPLDDEGNVDFTPHKDASEDVEGHVLDLDIERKR
Ga0308175_1000888203	3300031938	Soil	MSENINEIVLKDETDPTDVEGHFLPLDDEGNTDFTPHRDGDDVEGHVLDLDVERKR
Ga0308175_1001642752	3300031938	Soil	MSENINEIILKDETDPADVEGHFLPLDDEGNVDFTPIRDADDVEGHVLDLDIERKR
Ga0308175_1006645981	3300031938	Soil	MSENINEIILSDETDPTDVEGHYLPLDEEGNVDFTPHKDLPETDDDVEGHVLDLDIERKR
Ga0308175_1026484432	3300031938	Soil	MSENTTENIVLRDETDPTDVEGHYLPLDDEGNVDFAPHRDDEDDVEGHVLDLDIERKR
Ga0308176_1000156315	3300031996	Soil	TMSENINEIILKDETDPADVEGHFLPLDDEGNVDFTPIRDADDVEGHVLDLDIERKR
Ga0308176_116685031	3300031996	Soil	MSENTTENIVLRDETDPTDVEGHYLPLDDEGNVDFAPHREDDDDVEGHVLDLDIERKR
Ga0308176_123508422	3300031996	Soil	RRMIEFHAASEGEKIMSENTNEIILKDETDPTDVEGHYLPLDDEGNVDFTPHRDADEDVEGHVLDLDIERKR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F070927

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences