NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F070823

Metagenome Family F070823

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F070823
Family Type Metagenome
Number of Sequences 122
Average Sequence Length 40 residues
Representative Sequence MNGTECRPQAPVAEGGPESYEGYLGDAPKTLFIFLATPYPLR
Number of Associated Samples 29
Number of Associated Scaffolds 122

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 33.61 %
% of genes near scaffold ends (potentially truncated) 34.43 %
% of genes from short scaffolds (< 2000 bps) 36.07 %
Associated GOLD sequencing projects 26
AlphaFold2 3D model prediction Yes
3D model pTM-score0.22

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (82.787 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment
(62.295 % of family members)
Environment Ontology (ENVO) Unclassified
(66.393 % of family members)
Earth Microbiome Project Ontology (EMPO) Unclassified
(63.115 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Fibrous Signal Peptide: No Secondary Structure distribution: α-helix: 14.29%    β-sheet: 0.00%    Coil/Unstructured: 85.71%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.22
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 122 Family Scaffolds
PF00282Pyridoxal_deC 4.10
PF10143PhosphMutase 2.46
PF04055Radical_SAM 2.46
PF09976TPR_21 2.46
PF07085DRTGG 2.46
PF13464DUF4115 1.64
PF00005ABC_tran 1.64
PF08713DNA_alkylation 1.64
PF03575Peptidase_S51 1.64
PF00246Peptidase_M14 1.64
PF06452CBM9_1 1.64
PF08245Mur_ligase_M 1.64
PF00756Esterase 1.64
PF12679ABC2_membrane_2 1.64
PF13683rve_3 1.64
PF02769AIRS_C 1.64
PF13620CarboxypepD_reg 1.64
PF12705PDDEXK_1 1.64
PF04015DUF362 1.64
PF14332DUF4388 0.82
PF05193Peptidase_M16_C 0.82
PF01063Aminotran_4 0.82
PF00759Glyco_hydro_9 0.82
PF00682HMGL-like 0.82
PF09852DUF2079 0.82
PF01050MannoseP_isomer 0.82
PF02545Maf 0.82
PF00156Pribosyltran 0.82
PF03572Peptidase_S41 0.82
PF11175DUF2961 0.82
PF09397FtsK_gamma 0.82
PF11741AMIN 0.82
PF14559TPR_19 0.82
PF04389Peptidase_M28 0.82
PF03606DcuC 0.82
PF01850PIN 0.82
PF00144Beta-lactamase 0.82
PF12675DUF3795 0.82
PF02321OEP 0.82
PF12836HHH_3 0.82
PF13520AA_permease_2 0.82
PF04893Yip1 0.82
PF02518HATPase_c 0.82
PF01228Gly_radical 0.82
PF13453zf-TFIIB 0.82
PF01145Band_7 0.82
PF14595Thioredoxin_9 0.82
PF02417Chromate_transp 0.82
PF00881Nitroreductase 0.82
PF08530PepX_C 0.82
PF14684Tricorn_C1 0.82
PF064393keto-disac_hyd 0.82
PF00120Gln-synt_C 0.82
PF14498Glyco_hyd_65N_2 0.82
PF09371Tex_N 0.82
PF13646HEAT_2 0.82
PF13186SPASM 0.82
PF00486Trans_reg_C 0.82
PF14242DUF4342 0.82
PF00111Fer2 0.82
PF13692Glyco_trans_1_4 0.82
PF13181TPR_8 0.82
PF04519Bactofilin 0.82
PF02687FtsX 0.82
PF07690MFS_1 0.82
PF10431ClpB_D2-small 0.82
PF00326Peptidase_S9 0.82
PF01810LysE 0.82
PF01321Creatinase_N 0.82
PF02472ExbD 0.82
PF00383dCMP_cyt_deam_1 0.82
PF00892EamA 0.82
PF02481DNA_processg_A 0.82
PF02578Cu-oxidase_4 0.82
PF00152tRNA-synt_2 0.82
PF03169OPT 0.82
PF08448PAS_4 0.82
PF07676PD40 0.82
PF02896PEP-utilizers_C 0.82
PF02146SIR2 0.82

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 122 Family Scaffolds
COG0076Glutamate or tyrosine decarboxylase or a related PLP-dependent proteinAmino acid transport and metabolism [E] 4.10
COG1538Outer membrane protein TolCCell wall/membrane/envelope biogenesis [M] 1.64
COG2006Uncharacterized conserved protein, DUF362 familyFunction unknown [S] 1.64
COG49123-methyladenine DNA glycosylase AlkDReplication, recombination and repair [L] 1.64
COG0115Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyaseAmino acid transport and metabolism [E] 1.64
COG0758Predicted Rossmann fold nucleotide-binding protein DprA/Smf involved in DNA uptakeReplication, recombination and repair [L] 1.64
COG1190Lysyl-tRNA synthetase, class IITranslation, ribosomal structure and biogenesis [J] 0.82
COG1297Predicted oligopeptide transporter, OPT familyGeneral function prediction only [R] 0.82
COG1496Copper oxidase (laccase) domainInorganic ion transport and metabolism [P] 0.82
COG1664Cytoskeletal protein CcmA, bactofilin familyCytoskeleton [Z] 0.82
COG1680CubicO group peptidase, beta-lactamase class C familyDefense mechanisms [V] 0.82
COG1686D-alanyl-D-alanine carboxypeptidaseCell wall/membrane/envelope biogenesis [M] 0.82
COG2059Chromate transport protein ChrAInorganic ion transport and metabolism [P] 0.82
COG2269Elongation factor P--beta-lysine ligase (EF-P beta-lysylation pathway)Translation, ribosomal structure and biogenesis [J] 0.82
COG2367Beta-lactamase class ADefense mechanisms [V] 0.82
COG2936Predicted acyl esteraseGeneral function prediction only [R] 0.82
COG0006Xaa-Pro aminopeptidaseAmino acid transport and metabolism [E] 0.82
COG0017Aspartyl/asparaginyl-tRNA synthetaseTranslation, ribosomal structure and biogenesis [J] 0.82
COG0173Aspartyl-tRNA synthetaseTranslation, ribosomal structure and biogenesis [J] 0.82
COG04247-methyl-GTP pyrophosphatase and related NTP pyrophosphatases, Maf/HAM1 superfamilySecondary metabolites biosynthesis, transport and catabolism [Q] 0.82
COG0793C-terminal processing protease CtpA/Prc, contains a PDZ domainPosttranslational modification, protein turnover, chaperones [O] 0.82
COG0846NAD-dependent protein deacetylase, SIR2 familyPosttranslational modification, protein turnover, chaperones [O] 0.82
COG0848Biopolymer transport protein ExbDIntracellular trafficking, secretion, and vesicular transport [U] 0.82


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms82.79 %
UnclassifiedrootN/A17.21 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300009039|Ga0105152_10026801All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes2270Open in IMG/M
3300009039|Ga0105152_10074636Not Available1368Open in IMG/M
3300009111|Ga0115026_11459337Not Available568Open in IMG/M
3300012964|Ga0153916_10005782All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes9465Open in IMG/M
3300012964|Ga0153916_10024216All Organisms → cellular organisms → Bacteria5183Open in IMG/M
3300012964|Ga0153916_10043351All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes4011Open in IMG/M
3300012964|Ga0153916_10233602Not Available1848Open in IMG/M
3300013088|Ga0163200_1088916All Organisms → cellular organisms → Bacteria937Open in IMG/M
3300018055|Ga0184616_10308544Not Available598Open in IMG/M
3300022553|Ga0212124_10269225All Organisms → cellular organisms → Bacteria909Open in IMG/M
3300025843|Ga0209182_10001958All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes → unclassified Aminicenantes → Aminicenantes bacterium SCGC AAA255-A066114Open in IMG/M
3300025843|Ga0209182_10020347Not Available1983Open in IMG/M
3300027740|Ga0214474_1136281All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria916Open in IMG/M
3300027740|Ga0214474_1158538All Organisms → cellular organisms → Bacteria839Open in IMG/M
3300027740|Ga0214474_1343776All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium523Open in IMG/M
3300027811|Ga0256868_10010279All Organisms → cellular organisms → Bacteria4545Open in IMG/M
3300027811|Ga0256868_10013872All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes3876Open in IMG/M
3300027811|Ga0256868_10045262All Organisms → cellular organisms → Bacteria2024Open in IMG/M
3300027811|Ga0256868_10181074Not Available904Open in IMG/M
3300027900|Ga0209253_10481801All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla928Open in IMG/M
3300030613|Ga0299915_10000778All Organisms → cellular organisms → Bacteria23648Open in IMG/M
3300030613|Ga0299915_10001892All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes15310Open in IMG/M
3300030613|Ga0299915_10008827All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes7453Open in IMG/M
3300030613|Ga0299915_10016180All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes5551Open in IMG/M
3300030613|Ga0299915_10019003All Organisms → cellular organisms → Bacteria5135Open in IMG/M
3300030613|Ga0299915_10028053All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes4215Open in IMG/M
3300030613|Ga0299915_10038108All Organisms → cellular organisms → Bacteria3587Open in IMG/M
3300030613|Ga0299915_10060159All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes2807Open in IMG/M
3300030613|Ga0299915_10195731All Organisms → cellular organisms → Bacteria1429Open in IMG/M
3300030613|Ga0299915_10401026Not Available919Open in IMG/M
3300030613|Ga0299915_10627429All Organisms → cellular organisms → Bacteria688Open in IMG/M
3300030613|Ga0299915_10636471Not Available682Open in IMG/M
3300030613|Ga0299915_10965239Not Available519Open in IMG/M
3300031707|Ga0315291_10001454All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes31645Open in IMG/M
3300031707|Ga0315291_10004728All Organisms → cellular organisms → Bacteria17242Open in IMG/M
3300031707|Ga0315291_10016757All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes8790Open in IMG/M
3300031707|Ga0315291_10026196All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes6857Open in IMG/M
3300031707|Ga0315291_10036110All Organisms → cellular organisms → Bacteria5714Open in IMG/M
3300031707|Ga0315291_10085202All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes3446Open in IMG/M
3300031707|Ga0315291_10110392All Organisms → cellular organisms → Bacteria2948Open in IMG/M
3300031707|Ga0315291_10209414All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes1980Open in IMG/M
3300031707|Ga0315291_10363219All Organisms → cellular organisms → Bacteria1391Open in IMG/M
3300031707|Ga0315291_11146868All Organisms → cellular organisms → Bacteria640Open in IMG/M
3300031746|Ga0315293_10001301All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes24178Open in IMG/M
3300031746|Ga0315293_10042839All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes3952Open in IMG/M
3300031746|Ga0315293_10049578All Organisms → cellular organisms → Bacteria3645Open in IMG/M
3300031746|Ga0315293_10057858Not Available3350Open in IMG/M
3300031746|Ga0315293_10090887All Organisms → cellular organisms → Bacteria2602Open in IMG/M
3300031746|Ga0315293_10104711All Organisms → cellular organisms → Bacteria2398Open in IMG/M
3300031746|Ga0315293_10191763Not Available1685Open in IMG/M
3300031746|Ga0315293_10250613Not Available1437Open in IMG/M
3300031746|Ga0315293_10655288Not Available787Open in IMG/M
3300031772|Ga0315288_10017699All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes8843Open in IMG/M
3300031772|Ga0315288_10271365All Organisms → cellular organisms → Bacteria1790Open in IMG/M
3300031772|Ga0315288_10866718All Organisms → cellular organisms → Bacteria823Open in IMG/M
3300031885|Ga0315285_10056839All Organisms → cellular organisms → Bacteria3619Open in IMG/M
3300031885|Ga0315285_10061199All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes3455Open in IMG/M
3300031885|Ga0315285_10091047All Organisms → cellular organisms → Bacteria2691Open in IMG/M
3300031885|Ga0315285_10151254All Organisms → cellular organisms → Bacteria1927Open in IMG/M
3300031885|Ga0315285_10172073All Organisms → cellular organisms → Bacteria1768Open in IMG/M
3300031885|Ga0315285_10695728Not Available655Open in IMG/M
3300031952|Ga0315294_10134382All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes2528Open in IMG/M
3300031952|Ga0315294_10165549All Organisms → cellular organisms → Bacteria2229Open in IMG/M
3300031952|Ga0315294_10845417Not Available782Open in IMG/M
3300031999|Ga0315274_10033662All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes7057Open in IMG/M
3300031999|Ga0315274_10157958All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes2867Open in IMG/M
3300031999|Ga0315274_10213684All Organisms → cellular organisms → Bacteria2376Open in IMG/M
3300031999|Ga0315274_10390390All Organisms → cellular organisms → Bacteria1617Open in IMG/M
3300031999|Ga0315274_10479911All Organisms → cellular organisms → Bacteria1413Open in IMG/M
3300031999|Ga0315274_10521105All Organisms → cellular organisms → Bacteria1337Open in IMG/M
3300032046|Ga0315289_10039725All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes6005Open in IMG/M
3300032046|Ga0315289_10206075All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2140Open in IMG/M
3300032046|Ga0315289_11501096All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Calotrichaceae → Calothrix → unclassified Calothrix → Calothrix sp. HK-06514Open in IMG/M
3300032046|Ga0315289_11542876Not Available503Open in IMG/M
3300032053|Ga0315284_10085320All Organisms → cellular organisms → Bacteria4258Open in IMG/M
3300032053|Ga0315284_10107466All Organisms → cellular organisms → Bacteria3721Open in IMG/M
3300032070|Ga0315279_10006051All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes15407Open in IMG/M
3300032070|Ga0315279_10012228All Organisms → cellular organisms → Bacteria9842Open in IMG/M
3300032070|Ga0315279_10023833All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes6420Open in IMG/M
3300032070|Ga0315279_10029109All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes → unclassified Aminicenantes → Candidatus Aminicenantes bacterium RBG_16_63_165644Open in IMG/M
3300032070|Ga0315279_10029769All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → unclassified Holophagae → Holophagae bacterium5565Open in IMG/M
3300032070|Ga0315279_10046047All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes4198Open in IMG/M
3300032070|Ga0315279_10054293All Organisms → cellular organisms → Bacteria3764Open in IMG/M
3300032070|Ga0315279_10060043All Organisms → cellular organisms → Bacteria3521Open in IMG/M
3300032070|Ga0315279_10071861All Organisms → cellular organisms → Bacteria3120Open in IMG/M
3300032070|Ga0315279_10074419All Organisms → cellular organisms → Bacteria3046Open in IMG/M
3300032070|Ga0315279_10111129All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes2324Open in IMG/M
3300032118|Ga0315277_10006879All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes14804Open in IMG/M
3300032118|Ga0315277_10072830All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes3925Open in IMG/M
3300032118|Ga0315277_10115404All Organisms → cellular organisms → Bacteria3011Open in IMG/M
3300032118|Ga0315277_10210794All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes2106Open in IMG/M
3300032118|Ga0315277_11240366Not Available658Open in IMG/M
3300032143|Ga0315292_10041634All Organisms → cellular organisms → Bacteria3348Open in IMG/M
3300032143|Ga0315292_10658550All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium881Open in IMG/M
3300032143|Ga0315292_10998605Not Available695Open in IMG/M
3300032143|Ga0315292_11516285Not Available542Open in IMG/M
3300032156|Ga0315295_10006970All Organisms → cellular organisms → Bacteria9662Open in IMG/M
3300032156|Ga0315295_10077646All Organisms → cellular organisms → Bacteria3189Open in IMG/M
3300032156|Ga0315295_11740525Not Available593Open in IMG/M
3300032163|Ga0315281_10007380All Organisms → cellular organisms → Bacteria15491Open in IMG/M
3300032163|Ga0315281_10012524All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes11540Open in IMG/M
3300032177|Ga0315276_10064889All Organisms → cellular organisms → Bacteria3626Open in IMG/M
3300032177|Ga0315276_11350459Not Available746Open in IMG/M
3300032342|Ga0315286_10021049All Organisms → cellular organisms → Bacteria6674Open in IMG/M
3300032401|Ga0315275_10007678All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes10440Open in IMG/M
3300032401|Ga0315275_10029058All Organisms → cellular organisms → Bacteria5776Open in IMG/M
3300032401|Ga0315275_10039493All Organisms → cellular organisms → Bacteria5005Open in IMG/M
3300032401|Ga0315275_10360671All Organisms → cellular organisms → Bacteria1628Open in IMG/M
3300032401|Ga0315275_10455582All Organisms → cellular organisms → Bacteria1434Open in IMG/M
3300033489|Ga0299912_10008514All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes8513Open in IMG/M
3300033489|Ga0299912_10009319All Organisms → cellular organisms → Bacteria8198Open in IMG/M
3300033489|Ga0299912_10018961All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes → unclassified Aminicenantes → Aminicenantes bacterium SCGC AAA252-K075900Open in IMG/M
3300033489|Ga0299912_10026212All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes5043Open in IMG/M
3300033489|Ga0299912_10033799All Organisms → cellular organisms → Bacteria4448Open in IMG/M
3300033489|Ga0299912_10038245All Organisms → cellular organisms → Bacteria4184Open in IMG/M
3300033489|Ga0299912_10040074All Organisms → cellular organisms → Bacteria4088Open in IMG/M
3300033489|Ga0299912_10052659All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes3560Open in IMG/M
3300033489|Ga0299912_10106923All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Microgenomates group → Candidatus Woesebacteria → Candidatus Woesebacteria bacterium2450Open in IMG/M
3300033489|Ga0299912_10134315All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes2159Open in IMG/M
3300033489|Ga0299912_10234773All Organisms → cellular organisms → Bacteria1563Open in IMG/M
3300033489|Ga0299912_10719944All Organisms → cellular organisms → Bacteria773Open in IMG/M
3300033513|Ga0316628_100001920All Organisms → cellular organisms → Bacteria15039Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment62.30%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil13.93%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil12.30%
Lake SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Lake Sediment3.28%
Freshwater WetlandsEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands3.28%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater1.64%
WetlandEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland0.82%
Freshwater Lake SedimentEnvironmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment0.82%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.82%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.82%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300009039Lake sediment microbial communities from Lake Baikal, Russia to study Microbial Dark Matter (Phase II) - Lake Baikal sediment 0-5 cmEnvironmentalOpen in IMG/M
3300009111Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1EnvironmentalOpen in IMG/M
3300012964Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 4 metaGEnvironmentalOpen in IMG/M
3300013088Freshwater microbial communities from Powell Lake, British Columbia, Canada to study Microbial Dark Matter (Phase II) - PL_2010_200mEnvironmentalOpen in IMG/M
3300018055Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_90_coexEnvironmentalOpen in IMG/M
3300022553Powell_combined assemblyEnvironmentalOpen in IMG/M
3300025843Lake sediment microbial communities from Lake Baikal, Russia to study Microbial Dark Matter (Phase II) - Lake Baikal sediment 0-5 cm (SPAdes)EnvironmentalOpen in IMG/M
3300027740Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT95D214 HiSeqEnvironmentalOpen in IMG/M
3300027811Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT92D227 HiSeqEnvironmentalOpen in IMG/M
3300027900Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - BRP12 BR (SPAdes)EnvironmentalOpen in IMG/M
3300030613Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT92D227EnvironmentalOpen in IMG/M
3300031707Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_20EnvironmentalOpen in IMG/M
3300031746Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_20EnvironmentalOpen in IMG/M
3300031772Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_20EnvironmentalOpen in IMG/M
3300031885Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_36EnvironmentalOpen in IMG/M
3300031952Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_40EnvironmentalOpen in IMG/M
3300031999Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_20EnvironmentalOpen in IMG/M
3300032046Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_40EnvironmentalOpen in IMG/M
3300032053Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_16EnvironmentalOpen in IMG/M
3300032070Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_20EnvironmentalOpen in IMG/M
3300032118Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G05_15EnvironmentalOpen in IMG/M
3300032143Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_0EnvironmentalOpen in IMG/M
3300032156Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G14_0EnvironmentalOpen in IMG/M
3300032163Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_0EnvironmentalOpen in IMG/M
3300032177Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G05_0EnvironmentalOpen in IMG/M
3300032342Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G10_0EnvironmentalOpen in IMG/M
3300032401Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G03_0EnvironmentalOpen in IMG/M
3300033489Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT95D214EnvironmentalOpen in IMG/M
3300033513Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_CEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0105152_1002680113300009039Lake SedimentMNGTECRPQAPVAEGGPEPYEGYIGDPPKALSIFLATPYPLR*
Ga0105152_1007463623300009039Lake SedimentMNGTECRPQAPVAEGGPEPYEGYIGDPPKTLSIFLAT
Ga0115026_1145933723300009111WetlandPQAPVAEGGPESYEGHIGDTPKTLFIFLATPYPLR*
Ga0153916_10005782103300012964Freshwater WetlandsMNGTECRPQAPVAEGGPESYEGHIGDTPKTLLIFLATPYPLR*
Ga0153916_1002421633300012964Freshwater WetlandsMKGTECRPQAPVAEGGPESYEGYIGDTPKTLFIFIATPYPLRYLYSPDT*
Ga0153916_1004335143300012964Freshwater WetlandsMNGAECRPQAPVAEGGPESYEGLIGDTPKTPFIFLATPYPLR*
Ga0153916_1023360213300012964Freshwater WetlandsMPPETPVAEGGPESYEGYIGDTPKTLSIFLATPYPLR*
Ga0163200_108891623300013088FreshwaterMNGTECRPQAPVAEGGTEFYEGYLGNAPKTLFIFLATPYPLR*
Ga0184616_1030854413300018055Groundwater SedimentMNGTECRPQATVAEGGPESYEGYIGDTPKTLFIFIATPYPL
Ga0212124_1026922513300022553FreshwaterMNGTECRPQAPVAEGGPEPYEGSLGDAPKTLFIFLATPY
Ga0209182_1000195813300025843Lake SedimentMNGTECRPQAPVAEGGPEPYEGYIGDPPKTLSIFLATPYPLR
Ga0209182_1002034723300025843Lake SedimentAKKKHLCMNGTECRPQAPVAEGGPEPYEGYIGDPPKTLSIFLATPYPLR
Ga0214474_113628133300027740SoilMNGTERRPQAPVAEGGPESYEGYIGDTPKTLFIFIATPYPLR
Ga0214474_115853813300027740SoilMNGTECRPQAPVAEGGPESYEGYLGDAPKTLFIFLATPYPLR
Ga0214474_134377613300027740SoilMNGTECRPQAPVAEGGLESYEGYLGDSPKTLFIFLATP
Ga0256868_1001027923300027811SoilMNGTECRPQAPVAEGGPEPYEGYIGDTPKTLSIFLATPYPLR
Ga0256868_1001387213300027811SoilMNGTECRPQAPVAEGGPESYEGYLGDAPKTLFIFLATP
Ga0256868_1004526223300027811SoilMNGTECLPQAPVAEGGPESYEGYFGDAPKTLFIFLATPYPLR
Ga0256868_1018107423300027811SoilMNGTERRPQAPVAEGGPESYEGYIGDTPKTLFIFLATPYPLR
Ga0209253_1048180113300027900Freshwater Lake SedimentMNGTECRPQAPVAEGGPESYEGYPGDTPKTLSIFLATPPP
Ga0299915_1000077853300030613SoilMKGIECRPQAPVAEGGPESYEGYIGDTPKTLSIFLATPYPLR
Ga0299915_1000189243300030613SoilMNGTECRPQAPVAEGGPEPYEGYIGHTPKTLSIFLATPYPLR
Ga0299915_1000882743300030613SoilMNGTECRPQAPVAEGGPESYEGYLGDAPKTLFIFLATPNPLR
Ga0299915_1001618023300030613SoilMNGPECRPQAPVAEGGPESYEGHIDDTPKTLSIFLATPYPLR
Ga0299915_1001900333300030613SoilMNGTECRPQAPVAEGGPEPYEGYIGDTPKTLSIFLATPYPL
Ga0299915_1002805343300030613SoilMNGPECRPQAPVAEGGPESYEGYLGDAPKTLFIFLATPYPLR
Ga0299915_1003810813300030613SoilMNGTECRPQVPVAEGGPESYEGYLGDAPKTLFIFLATPYPLR
Ga0299915_1006015923300030613SoilMKGTECRPQAPVAEGGPESYESYLGDAPETLFIFLTTPYPLR
Ga0299915_1019573113300030613SoilPQAPVAEGGPESYEGYLGDAPKTLFIFLATPYPLR
Ga0299915_1040102613300030613SoilMNGTECRPQAPVAEGGPESYEGYFGDAPKTLFIFLATPYPLR
Ga0299915_1062742923300030613SoilMNGTECRPQAPVAEGGPEPYEGYIGDTPKTLSIFLAT
Ga0299915_1063647123300030613SoilMNGTECRPQAPVEEGGPESYEGYLGDAPETLFIFLATPYPLR
Ga0299915_1096523913300030613SoilMNGTECRPQDPVAEGGPEPYEGYLGDAPKTLFIFLATPYPLR
Ga0315291_10001454273300031707SedimentMNGTECRPQAPVAEGGPESYEGYIGDTPKTLSIFLATPYPLR
Ga0315291_1000472883300031707SedimentMNGTECRPQAPVAEGGPEPYEGYLGDAPKTLFIFLATPYPLR
Ga0315291_1001675743300031707SedimentMNGTECRPQAPVAEGGPESYEGHIGDTPKTLSIFLATPYPLR
Ga0315291_1002619653300031707SedimentMNGTECRPQAPVAEGGREFYEGYLGNAPKTLSMFLATPYPLR
Ga0315291_1003611013300031707SedimentCRPQAPVAEGGPEPYEGYLGDAPKTLFIFLATPCPLR
Ga0315291_1008520253300031707SedimentMNGTECRPQAPVAEGGPEPYEGSLGDAPKTLFIFLATPYPLR
Ga0315291_1011039213300031707SedimentMNGTECRPQAPVAEGGPEPYEGYLGDAPKTLFIFLATPYPL
Ga0315291_1020941423300031707SedimentMNGTECRPQAPVAEGGPEPYEGYLGGAPETLFIFLATPYPLR
Ga0315291_1036321913300031707SedimentRLQTPVAEGGPESYEGFLGDAPKTLFIFLSTPSPLR
Ga0315291_1114686813300031707SedimentNRMNGTECRPQAPVAEGGPEFYEGYLGNAPKTLFIFLATPYPLR
Ga0315293_10001301203300031746SedimentVNGTECRPQAPVAEGGPEPYEGYLGDAPKTLFIFLATP
Ga0315293_1004283933300031746SedimentMNGIECRPQAPVAEGGPESYEGYIGDTPKTLSIFLATPYPLR
Ga0315293_1004957833300031746SedimentMNGTECRPQAPVAEGGPEPYEGSLGDTPKTLFIFLATPYPLR
Ga0315293_1005785833300031746SedimentMSGTECRLQTPVAEGGPESYEGFLGDAPKTLFIFLSTPYPLR
Ga0315293_1009088713300031746SedimentMNGTECRLQVPVAEGGPESYEGYLGDPPKTLFMFLTTPYPLR
Ga0315293_1010471123300031746SedimentMNGTECRPQAPVAEGGAESNEGYIGDTPKTLSIFLATPYPLR
Ga0315293_1019176313300031746SedimentPQAPVAEGGPEPYEGYIGDPPKTLSIFLATPYPLR
Ga0315293_1025061333300031746SedimentMNGTECRPQAPVAEGGPESYEGHIGDTPKTLSIFLA
Ga0315293_1065528813300031746SedimentMNGTECRPQAPVAEGGPESYEGYIGDTPKTLPIFLATPYPL
Ga0315288_1001769913300031772SedimentMNGTECRPQAPVAERGPAPYEGSLGDAPKTLFIFLATPYPLR
Ga0315288_1027136513300031772SedimentNGTECRPQAPVAEGGPEPYEGYLGDAPKTLFIFLATPYPLR
Ga0315288_1086671823300031772SedimentMNGTECRPQAPVAEGGIEFYEGYLGNAPKTLFIFLATPYPLR
Ga0315285_1005683923300031885SedimentMNGTECRTQAPVAEGGPESYEGYIGDTPKTLFIFIATPYPLR
Ga0315285_1006119963300031885SedimentMNGTECRPQAPVAEGGPEFYEGYLGNAPKTLFIFLATPYPLR
Ga0315285_1009104723300031885SedimentMNGTECRPQAPVAEGGPESYEGYFGDAPKTLFIFLATPYLLR
Ga0315285_1015125413300031885SedimentMNGTECRPQAPVAERGPESYEGYIGDTPKTLFIFIATPYPLR
Ga0315285_1017207313300031885SedimentPQAPVAERGPEFYEGYLGNAPKTLFIFLATPYPLR
Ga0315285_1069572813300031885SedimentMNGTECRPQAPVAEGGPESYEGYIGDTPKTLFIFIATPYP
Ga0315294_1013438243300031952SedimentMNGTECRPQAPVAEGGPEPYEGSLGDAPKTLFIFLATPYP
Ga0315294_1016554913300031952SedimentMNGTECRPQAPVAEGGPSFNESYHYGDTPKTLFIFLATPYPLR
Ga0315294_1084541723300031952SedimentTECRPQAPVAEGGPEPYEGSLGDAPKTLFIFLATPYPLR
Ga0315274_1003366253300031999SedimentMDGPECRPQAPVAEGGPEPYEGYLGDAPKTLFIFLATPYPLR
Ga0315274_1015795833300031999SedimentMNGYECRPQAPVAEGGPESYEGYIGDTSKTLSIFLATPYPLR
Ga0315274_1021368433300031999SedimentMNGTECRPQAPVAEGGPEPYEGYTGDTPKTLSIFLATPYPLR
Ga0315274_1039039013300031999SedimentMNGTECRPQAPVAEGGPEFYEGYLGNAPKTLSMFIATPYPLR
Ga0315274_1047991123300031999SedimentMIYPTFMTQAQKKLQSMNGTECRSQAPVAEGGPEPYEGSLGDAPKTLFIFLATPYPLR
Ga0315274_1052110513300031999SedimentMNGTECRSQAPVAEGGPEPYEGSLGDAPKTLFIFL
Ga0315289_1003972573300032046SedimentMNGPECRPQAPVAEGGPEPYEGSLGDAPKPLFIFLATPYPLR
Ga0315289_1020607533300032046SedimentMNGTECRPHAPVEEGGPESYEGYIGDTPKTLSIFLATPYPLR
Ga0315289_1150109613300032046SedimentMNGTECRPQTLVAEGGPEPYEGYTGDTPKTLSIFLATPYPLR
Ga0315289_1154287623300032046SedimentRPQAPVAEGGPEPYEGYLGDAPKTLFIFLATPYPLR
Ga0315284_1008532043300032053SedimentMSGTECRPQAPVAEGGPESYEGHIGDTPKTLSIFLATPYPLR
Ga0315284_1010746613300032053SedimentMNGPECRPQAPVAEAGAAPYEGSLGDAPKTLFIFLATPYPLR
Ga0315279_1000605153300032070SedimentMNGTECRPQAPVAEGGPESYEGYIGDTPKTLFIFIAIPYPLR
Ga0315279_1001222853300032070SedimentMNGTECRPQAPVAEGGPEPYEGCLGDAPKTLFIFLATPYPLR
Ga0315279_1002383313300032070SedimentMNGPECRPQAPVAEGGPESYEGYIGDTPKTLFIFIATPYPLR
Ga0315279_1002910923300032070SedimentMNGTECRPQAPVAEGGSEPYEGYLGDPPKTLFIFLATPYPLR
Ga0315279_1002976923300032070SedimentMNGTECRPQAPVAEGGPESYEGYLGDAPETLFIFLATPYPLR
Ga0315279_1004604723300032070SedimentMNGTECRPQAPVAEGGPAPYEGSLGDAPKTLFIFLATPYPLR
Ga0315279_1005429323300032070SedimentMNGPECRPQAPVAEGGPESYEGHIGDTPKTLSIFLATPYPLR
Ga0315279_1006004313300032070SedimentECRPQAPVAEGGPESYEGYIGDTPKTLFIFIATPYPLR
Ga0315279_1007186133300032070SedimentMNGTECRPQAPVAEGGPEPYEGSLGDAPKTMFIFLATPY
Ga0315279_1007441923300032070SedimentMNGTECRPQAPVAEGGPESYESYLGDAPKTLFIFLATPYPLR
Ga0315279_1011112923300032070SedimentMNGTECRPQAPVAEGGPESFEGHIGDTPKTLSMVLATPYPLR
Ga0315277_1000687983300032118SedimentMNGTECRPQAPVAEGGPESYEGYIGDTPKTLFIFIATPYPLR
Ga0315277_1007283053300032118SedimentMNGPECRPQAPVAEGGPESYEGYIGDTSKTLSIFLATPYPLR
Ga0315277_1011540413300032118SedimentMNGTECRPQAPVAEGGPEPYEGYLGDAPKTLFIFLATP
Ga0315277_1021079413300032118SedimentTGCRPQAPVAEGGPESYEGNIGDTPKTLFIFLATPYPLR
Ga0315277_1124036613300032118SedimentMNGTECRPQAPVAEGGPEPYEGYLGDAPKTLFIFLAT
Ga0315292_1004163423300032143SedimentMNGTECCPQAPVVEGGPEPYEGYLGDAPKTLFIFLATPYPLR
Ga0315292_1065855023300032143SedimentMNGTECRPQAPVAEGGPEPYEGYLGDAPKTLFIFL
Ga0315292_1099860513300032143SedimentMNGTECRPQAPVAEGGPESYEGYLGDTPKTLFIFL
Ga0315292_1151628513300032143SedimentPQAPVAEGGPESYEGNIGDTPKTLFIFLATPYPLR
Ga0315295_1000697063300032156SedimentMNGTECRPQAPVAEGGPEPYEGYLGDVPKTLFIFLATPYPLR
Ga0315295_1007764613300032156SedimentMNGTECRPQAPVAKGGPNPYEGYIGDPPKTLSIFLAPR
Ga0315295_1174052513300032156SedimentNGTECRPQAPVAERGPESYEGYIGDTPKTLFIFIATPYPLR
Ga0315281_10007380103300032163SedimentMNGTECRPQAPVAEGGPEFYEGYIGNAPKTLFIFLATPYPLR
Ga0315281_1001252453300032163SedimentMNGTECRPQAPVAEGGPEPYEGSLGDAPKTLFIFLATPHPLR
Ga0315276_1006488913300032177SedimentMNGTECRPQAPVAEGGPEPYDGYLGDAPKTLFIFLATPYPLR
Ga0315276_1135045913300032177SedimentRPQAPVAEKRPEPYEGYIGDPPKTLSIFLATPYPLR
Ga0315286_1002104973300032342SedimentMNGTECRPQAPVAEKRPEPYEGYIGDPPKTLSIFLATPYPLR
Ga0315275_1000767863300032401SedimentMTAKFLLGGTGCRPKAPVAEGGPESYEGYIGDTPKTLSIFLATPYPLR
Ga0315275_1002905843300032401SedimentMNGTECRPQAPVAEGGPNPYEGYIGDPPKTLSIFLATPYPLR
Ga0315275_1003949343300032401SedimentMPSSSPRREGGAEPYEGSLGDAPKTLFIFLATPYPLR
Ga0315275_1036067123300032401SedimentMNGTECRPQAPVAEGGPESYEGHIGDTPKTLSMFLATPYPL
Ga0315275_1045558223300032401SedimentMNGTECRPQAPVAERGPESYEGYLGDPPKTLFIFLSTPYPLR
Ga0299912_1000851413300033489SoilMKGTECRPQAPVAEGGPESYEGYLGDAPKTLFIFL
Ga0299912_1000931933300033489SoilMKGTECRPQAPVAEGGPESYEGYIGDTPKTLFIFIATPYPLRYLYSPDT
Ga0299912_1001896133300033489SoilMNGTECRPQAPVAEGGPEFYEGYLGDAPKTLFMFLATPYPLR
Ga0299912_1002621213300033489SoilMEAALKPPVAEGDPASYEAYLGDTPKTLSIFLATPYPLR
Ga0299912_1003379913300033489SoilMNGPEWRPQAPVAEGGPDVTANAPETLFLFLATPYPLRQSEGDSEMV
Ga0299912_1003824533300033489SoilMNGTECRPQASVAEGGPESYEGYLGDAPKTLFIFLATPYPLR
Ga0299912_1004007443300033489SoilMNGAERRPQAPVAEGGPESYEGYLGDAAKTLFIFLATPYPLR
Ga0299912_1005265933300033489SoilMNGTECRPQAPVAEGGPESYEGYRGDAPKTLFIFLATPHPLR
Ga0299912_1010692323300033489SoilMNGTECRPQAPVAEGGSESYEGYIGDTPKTLFIFIATPYPLR
Ga0299912_1013431523300033489SoilMNGPECRPQAPVAEGGPESNEGYIGDTPKTLSIFLATPYSLR
Ga0299912_1023477313300033489SoilMNGTERRPQAPVAEGGPESYEGYIGDTPKTLFIFL
Ga0299912_1071994423300033489SoilMPPETPVAEGGPESYEGYIGDTPKTLSIFLATPYPLR
Ga0316628_10000192033300033513SoilMNGTECRPQAPVAEGGPESYGDTPKTLSVFIAIPYPLR


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