NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F070619

Metagenome / Metatranscriptome Family F070619

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F070619
Family Type Metagenome / Metatranscriptome
Number of Sequences 123
Average Sequence Length 84 residues
Representative Sequence MQLRHRIRAAADRVTAYLTLVGADPHDDEDLRARKALLVLISVLILPVAALWGALYLAFGSPVGVVPLVYFGVLLGAIAVFSRT
Number of Associated Samples 110
Number of Associated Scaffolds 123

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 49.59 %
% of genes near scaffold ends (potentially truncated) 95.12 %
% of genes from short scaffolds (< 2000 bps) 91.06 %
Associated GOLD sequencing projects 108
AlphaFold2 3D model prediction Yes
3D model pTM-score0.62

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (90.244 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(30.081 % of family members)
Environment Ontology (ENVO) Unclassified
(35.772 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(48.780 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 63.39%    β-sheet: 0.00%    Coil/Unstructured: 36.61%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.62
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 123 Family Scaffolds
PF00027cNMP_binding 19.51
PF00561Abhydrolase_1 4.88
PF05988DUF899 4.07
PF13738Pyr_redox_3 3.25
PF01557FAA_hydrolase 1.63
PF00196GerE 1.63
PF03473MOSC 1.63
PF00528BPD_transp_1 1.63
PF01872RibD_C 1.63
PF02518HATPase_c 1.63
PF00582Usp 0.81
PF06224HTH_42 0.81
PF05977MFS_3 0.81
PF00903Glyoxalase 0.81
PF12796Ank_2 0.81
PF01494FAD_binding_3 0.81
PF08450SGL 0.81
PF08327AHSA1 0.81
PF01323DSBA 0.81
PF03176MMPL 0.81
PF14681UPRTase 0.81
PF13522GATase_6 0.81
PF09413DUF2007 0.81
PF06897DUF1269 0.81
PF13673Acetyltransf_10 0.81
PF13450NAD_binding_8 0.81
PF09802Sec66 0.81
PF08386Abhydrolase_4 0.81
PF12697Abhydrolase_6 0.81
PF02617ClpS 0.81
PF06283ThuA 0.81

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 123 Family Scaffolds
COG4312Predicted dithiol-disulfide oxidoreductase, DUF899 familyGeneral function prediction only [R] 4.07
COG0262Dihydrofolate reductaseCoenzyme transport and metabolism [H] 1.63
COG06542-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductasesEnergy production and conversion [C] 1.63
COG1985Pyrimidine reductase, riboflavin biosynthesisCoenzyme transport and metabolism [H] 1.63
COG0578Glycerol-3-phosphate dehydrogenaseEnergy production and conversion [C] 0.81
COG0644Dehydrogenase (flavoprotein)Energy production and conversion [C] 0.81
COG0665Glycine/D-amino acid oxidase (deaminating)Amino acid transport and metabolism [E] 0.81
COG1033Predicted exporter protein, RND superfamilyGeneral function prediction only [R] 0.81
COG2127ATP-dependent Clp protease adapter protein ClpSPosttranslational modification, protein turnover, chaperones [O] 0.81
COG2409Predicted lipid transporter YdfJ, MMPL/SSD domain, RND superfamilyGeneral function prediction only [R] 0.81
COG2814Predicted arabinose efflux permease AraJ, MFS familyCarbohydrate transport and metabolism [G] 0.81
COG3214DNA glycosylase YcaQ, repair of DNA interstrand crosslinksReplication, recombination and repair [L] 0.81
COG3386Sugar lactone lactonase YvrECarbohydrate transport and metabolism [G] 0.81
COG3391DNA-binding beta-propeller fold protein YncEGeneral function prediction only [R] 0.81
COG4803Uncharacterized membrane proteinFunction unknown [S] 0.81
COG4813Trehalose utilization proteinCarbohydrate transport and metabolism [G] 0.81

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms91.06 %
UnclassifiedrootN/A8.94 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000890|JGI11643J12802_12109446All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria728Open in IMG/M
3300000891|JGI10214J12806_10848966All Organisms → cellular organisms → Bacteria → Proteobacteria971Open in IMG/M
3300000956|JGI10216J12902_100217149All Organisms → cellular organisms → Bacteria2655Open in IMG/M
3300000956|JGI10216J12902_122253292All Organisms → cellular organisms → Bacteria → Terrabacteria group649Open in IMG/M
3300001431|F14TB_100264335All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium1722Open in IMG/M
3300001431|F14TB_100364100All Organisms → cellular organisms → Bacteria590Open in IMG/M
3300002075|JGI24738J21930_10117432Not Available576Open in IMG/M
3300004156|Ga0062589_100098623All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1851Open in IMG/M
3300004463|Ga0063356_101855788All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae907Open in IMG/M
3300004479|Ga0062595_101546367All Organisms → cellular organisms → Bacteria615Open in IMG/M
3300004479|Ga0062595_101636926All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria602Open in IMG/M
3300004479|Ga0062595_102280378All Organisms → cellular organisms → Bacteria533Open in IMG/M
3300004643|Ga0062591_102137757All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia581Open in IMG/M
3300005093|Ga0062594_100645064All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia941Open in IMG/M
3300005328|Ga0070676_10596370All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria796Open in IMG/M
3300005329|Ga0070683_101166707All Organisms → cellular organisms → Bacteria → Terrabacteria group740Open in IMG/M
3300005436|Ga0070713_101274079All Organisms → cellular organisms → Bacteria712Open in IMG/M
3300005436|Ga0070713_101343923All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia693Open in IMG/M
3300005456|Ga0070678_101721933All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia590Open in IMG/M
3300005545|Ga0070695_101429752All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria574Open in IMG/M
3300005560|Ga0066670_10691656All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia618Open in IMG/M
3300005617|Ga0068859_100514003All Organisms → cellular organisms → Bacteria1293Open in IMG/M
3300005840|Ga0068870_10430772All Organisms → cellular organisms → Bacteria865Open in IMG/M
3300005981|Ga0081538_10152794All Organisms → cellular organisms → Bacteria1042Open in IMG/M
3300005981|Ga0081538_10392541All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → unclassified Intrasporangiaceae → Intrasporangiaceae bacterium URHB0013500Open in IMG/M
3300006046|Ga0066652_101785994All Organisms → cellular organisms → Bacteria → Terrabacteria group556Open in IMG/M
3300006058|Ga0075432_10364230All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria616Open in IMG/M
3300006163|Ga0070715_10083644All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1454Open in IMG/M
3300006847|Ga0075431_100718269Not Available976Open in IMG/M
3300006847|Ga0075431_101038500All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales785Open in IMG/M
3300006904|Ga0075424_100911645All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia937Open in IMG/M
3300006904|Ga0075424_102717480All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia516Open in IMG/M
3300006954|Ga0079219_11096684All Organisms → cellular organisms → Bacteria674Open in IMG/M
3300007076|Ga0075435_100874874All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia783Open in IMG/M
3300009093|Ga0105240_10550518All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1276Open in IMG/M
3300009098|Ga0105245_11887165All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria651Open in IMG/M
3300009100|Ga0075418_10139662All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia2578Open in IMG/M
3300009137|Ga0066709_103783336All Organisms → cellular organisms → Bacteria → Terrabacteria group549Open in IMG/M
3300009157|Ga0105092_10438833All Organisms → cellular organisms → Bacteria745Open in IMG/M
3300009789|Ga0126307_10149023All Organisms → cellular organisms → Bacteria1872Open in IMG/M
3300009840|Ga0126313_11281224Not Available605Open in IMG/M
3300010038|Ga0126315_11067539All Organisms → cellular organisms → Bacteria → Terrabacteria group544Open in IMG/M
3300010044|Ga0126310_11452208All Organisms → cellular organisms → Bacteria561Open in IMG/M
3300010045|Ga0126311_10231286All Organisms → cellular organisms → Bacteria1363Open in IMG/M
3300010047|Ga0126382_11368397All Organisms → cellular organisms → Bacteria → Terrabacteria group644Open in IMG/M
3300010166|Ga0126306_11444851All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium570Open in IMG/M
3300010373|Ga0134128_11004161All Organisms → cellular organisms → Bacteria → Terrabacteria group922Open in IMG/M
3300010397|Ga0134124_11506818All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → Kribbella soli701Open in IMG/M
3300010401|Ga0134121_11720348All Organisms → cellular organisms → Bacteria → Terrabacteria group651Open in IMG/M
3300011003|Ga0138514_100036483All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria952Open in IMG/M
3300011119|Ga0105246_12018342All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → Kribbella soli557Open in IMG/M
3300012204|Ga0137374_10806310All Organisms → cellular organisms → Bacteria → Terrabacteria group696Open in IMG/M
3300012897|Ga0157285_10034622All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1157Open in IMG/M
3300012898|Ga0157293_10003549All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2051Open in IMG/M
3300012902|Ga0157291_10076936All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria856Open in IMG/M
3300012937|Ga0162653_100016311All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria958Open in IMG/M
3300012939|Ga0162650_100092264Not Available530Open in IMG/M
3300012988|Ga0164306_11331659All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia608Open in IMG/M
3300013096|Ga0157307_1048742All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria787Open in IMG/M
3300013102|Ga0157371_10102771All Organisms → cellular organisms → Bacteria2028Open in IMG/M
3300013307|Ga0157372_12188694Not Available635Open in IMG/M
3300014157|Ga0134078_10330811All Organisms → cellular organisms → Bacteria664Open in IMG/M
3300014497|Ga0182008_10539679All Organisms → cellular organisms → Bacteria → Terrabacteria group646Open in IMG/M
3300015077|Ga0173483_10491707All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria652Open in IMG/M
3300015372|Ga0132256_102212452Not Available654Open in IMG/M
3300015373|Ga0132257_101830835All Organisms → cellular organisms → Bacteria780Open in IMG/M
3300015374|Ga0132255_105287705All Organisms → cellular organisms → Bacteria546Open in IMG/M
3300018027|Ga0184605_10144882All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → environmental samples → uncultured Thermoleophilia bacterium1067Open in IMG/M
3300018051|Ga0184620_10001173All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria4971Open in IMG/M
3300018061|Ga0184619_10433321Not Available589Open in IMG/M
3300018067|Ga0184611_1240932All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium641Open in IMG/M
3300018071|Ga0184618_10112341All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1081Open in IMG/M
3300018072|Ga0184635_10123118All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia1031Open in IMG/M
3300018075|Ga0184632_10134531All Organisms → cellular organisms → Bacteria → Terrabacteria group1089Open in IMG/M
3300018422|Ga0190265_10056828All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3452Open in IMG/M
3300018466|Ga0190268_10015410Not Available2318Open in IMG/M
3300018476|Ga0190274_10893910All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium954Open in IMG/M
3300019255|Ga0184643_1389201All Organisms → cellular organisms → Bacteria → Terrabacteria group523Open in IMG/M
3300019279|Ga0184642_1568968All Organisms → cellular organisms → Bacteria → Terrabacteria group659Open in IMG/M
3300019875|Ga0193701_1047460All Organisms → cellular organisms → Bacteria872Open in IMG/M
3300019883|Ga0193725_1051712All Organisms → cellular organisms → Bacteria1048Open in IMG/M
3300021078|Ga0210381_10040081All Organisms → cellular organisms → Bacteria1362Open in IMG/M
3300021078|Ga0210381_10055875All Organisms → cellular organisms → Bacteria1196Open in IMG/M
3300021445|Ga0182009_10181820All Organisms → cellular organisms → Bacteria1015Open in IMG/M
3300023071|Ga0247752_1010418All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → Kribbella soli1263Open in IMG/M
3300025904|Ga0207647_10815645All Organisms → cellular organisms → Bacteria → Terrabacteria group501Open in IMG/M
3300025945|Ga0207679_11068591All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium740Open in IMG/M
3300025981|Ga0207640_12159490All Organisms → cellular organisms → Bacteria → Terrabacteria group505Open in IMG/M
3300026324|Ga0209470_1031331All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2728Open in IMG/M
3300027907|Ga0207428_10617702All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria780Open in IMG/M
3300028707|Ga0307291_1139408All Organisms → cellular organisms → Bacteria → Terrabacteria group615Open in IMG/M
3300028708|Ga0307295_10029033All Organisms → cellular organisms → Bacteria1382Open in IMG/M
3300028708|Ga0307295_10128314All Organisms → cellular organisms → Bacteria696Open in IMG/M
3300028711|Ga0307293_10130017All Organisms → cellular organisms → Bacteria801Open in IMG/M
3300028713|Ga0307303_10013915All Organisms → cellular organisms → Bacteria1470Open in IMG/M
3300028716|Ga0307311_10009922All Organisms → cellular organisms → Bacteria2236Open in IMG/M
3300028719|Ga0307301_10049044All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → unclassified Gaiella → Gaiella sp. SCGC AG-212-M141297Open in IMG/M
3300028755|Ga0307316_10124272Not Available910Open in IMG/M
3300028768|Ga0307280_10133735All Organisms → cellular organisms → Bacteria847Open in IMG/M
3300028768|Ga0307280_10399762All Organisms → cellular organisms → Bacteria → Terrabacteria group512Open in IMG/M
3300028771|Ga0307320_10247753All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → unclassified Gaiella → Gaiella sp. SCGC AG-212-M14702Open in IMG/M
3300028771|Ga0307320_10272491All Organisms → cellular organisms → Bacteria → Terrabacteria group669Open in IMG/M
3300028787|Ga0307323_10046910All Organisms → cellular organisms → Bacteria1519Open in IMG/M
3300028790|Ga0307283_10191479All Organisms → cellular organisms → Bacteria → Terrabacteria group582Open in IMG/M
3300028791|Ga0307290_10152580All Organisms → cellular organisms → Bacteria → Terrabacteria group846Open in IMG/M
3300028796|Ga0307287_10049799All Organisms → cellular organisms → Bacteria1536Open in IMG/M
3300028811|Ga0307292_10224966All Organisms → cellular organisms → Bacteria → Terrabacteria group775Open in IMG/M
3300028872|Ga0307314_10062484All Organisms → cellular organisms → Bacteria957Open in IMG/M
3300028872|Ga0307314_10241156All Organisms → cellular organisms → Bacteria → Terrabacteria group558Open in IMG/M
3300028876|Ga0307286_10406315All Organisms → cellular organisms → Bacteria511Open in IMG/M
3300028884|Ga0307308_10424585All Organisms → cellular organisms → Bacteria → Terrabacteria group637Open in IMG/M
3300028885|Ga0307304_10310452All Organisms → cellular organisms → Bacteria → Terrabacteria group698Open in IMG/M
3300031152|Ga0307501_10053393All Organisms → cellular organisms → Bacteria911Open in IMG/M
3300031170|Ga0307498_10118216All Organisms → cellular organisms → Bacteria840Open in IMG/M
3300031229|Ga0299913_10234982All Organisms → Viruses → Predicted Viral1816Open in IMG/M
3300031820|Ga0307473_10989835All Organisms → cellular organisms → Bacteria → Terrabacteria group613Open in IMG/M
3300031852|Ga0307410_11976418All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium520Open in IMG/M
3300031939|Ga0308174_10426942All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium1072Open in IMG/M
3300032126|Ga0307415_100387276All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1189Open in IMG/M
3300032174|Ga0307470_10510510All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria879Open in IMG/M
3300034131|Ga0334911_036889All Organisms → cellular organisms → Bacteria → Terrabacteria group694Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil30.08%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere6.50%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment5.69%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil5.69%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil4.88%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil4.88%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment3.25%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere3.25%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil2.44%
SoilEnvironmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil2.44%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere2.44%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.63%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil1.63%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere1.63%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere1.63%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere1.63%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.63%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.63%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment0.81%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.81%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil0.81%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil0.81%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil0.81%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.81%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.81%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil0.81%
Sub-Biocrust SoilEnvironmental → Terrestrial → Soil → Unclassified → Desert → Sub-Biocrust Soil0.81%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil0.81%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil0.81%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.81%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.81%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere0.81%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.81%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere0.81%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.81%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.81%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere0.81%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere0.81%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.81%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000890Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300000891Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soilEnvironmentalOpen in IMG/M
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300001431Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemlyEnvironmentalOpen in IMG/M
3300002075Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4Host-AssociatedOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300004643Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3EnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005328Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaGHost-AssociatedOpen in IMG/M
3300005329Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaGEnvironmentalOpen in IMG/M
3300005436Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaGEnvironmentalOpen in IMG/M
3300005456Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaGHost-AssociatedOpen in IMG/M
3300005545Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaGEnvironmentalOpen in IMG/M
3300005560Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119EnvironmentalOpen in IMG/M
3300005617Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2Host-AssociatedOpen in IMG/M
3300005840Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2Host-AssociatedOpen in IMG/M
3300005981Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1Host-AssociatedOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006058Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1Host-AssociatedOpen in IMG/M
3300006163Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaGEnvironmentalOpen in IMG/M
3300006847Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300006954Agricultural soil microbial communities from Georgia to study Nitrogen management - GA ControlEnvironmentalOpen in IMG/M
3300007076Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4Host-AssociatedOpen in IMG/M
3300009093Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaGHost-AssociatedOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009157Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015EnvironmentalOpen in IMG/M
3300009789Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28EnvironmentalOpen in IMG/M
3300009840Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105AEnvironmentalOpen in IMG/M
3300010038Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106EnvironmentalOpen in IMG/M
3300010044Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60EnvironmentalOpen in IMG/M
3300010045Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61EnvironmentalOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010166Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27EnvironmentalOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010397Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4EnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300011003Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t9i015EnvironmentalOpen in IMG/M
3300011119Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaGHost-AssociatedOpen in IMG/M
3300012204Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012897Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1EnvironmentalOpen in IMG/M
3300012898Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S194-509B-1EnvironmentalOpen in IMG/M
3300012902Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S169-409C-1EnvironmentalOpen in IMG/M
3300012937Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t5i015EnvironmentalOpen in IMG/M
3300012939Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t1i015EnvironmentalOpen in IMG/M
3300012988Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MGEnvironmentalOpen in IMG/M
3300013096Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2EnvironmentalOpen in IMG/M
3300013102Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaGHost-AssociatedOpen in IMG/M
3300013307Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaGHost-AssociatedOpen in IMG/M
3300014157Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300014497Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaGHost-AssociatedOpen in IMG/M
3300015077Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)EnvironmentalOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300018027Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coexEnvironmentalOpen in IMG/M
3300018051Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1EnvironmentalOpen in IMG/M
3300018061Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1EnvironmentalOpen in IMG/M
3300018067Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coexEnvironmentalOpen in IMG/M
3300018071Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1EnvironmentalOpen in IMG/M
3300018072Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2EnvironmentalOpen in IMG/M
3300018075Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1EnvironmentalOpen in IMG/M
3300018422Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 TEnvironmentalOpen in IMG/M
3300018466Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 TEnvironmentalOpen in IMG/M
3300018476Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 TEnvironmentalOpen in IMG/M
3300019255Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019279Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019875Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s2EnvironmentalOpen in IMG/M
3300019883Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a2EnvironmentalOpen in IMG/M
3300021078Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redoEnvironmentalOpen in IMG/M
3300021445Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaGEnvironmentalOpen in IMG/M
3300023071Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S019-104C-5EnvironmentalOpen in IMG/M
3300025904Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025945Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025981Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026324Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)EnvironmentalOpen in IMG/M
3300027907Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300028707Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_148EnvironmentalOpen in IMG/M
3300028708Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_152EnvironmentalOpen in IMG/M
3300028711Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150EnvironmentalOpen in IMG/M
3300028712Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_139EnvironmentalOpen in IMG/M
3300028713Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_184EnvironmentalOpen in IMG/M
3300028716Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198EnvironmentalOpen in IMG/M
3300028719Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182EnvironmentalOpen in IMG/M
3300028755Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356EnvironmentalOpen in IMG/M
3300028768Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119EnvironmentalOpen in IMG/M
3300028771Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369EnvironmentalOpen in IMG/M
3300028778Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142EnvironmentalOpen in IMG/M
3300028787Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381EnvironmentalOpen in IMG/M
3300028790Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_122EnvironmentalOpen in IMG/M
3300028791Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144EnvironmentalOpen in IMG/M
3300028796Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141EnvironmentalOpen in IMG/M
3300028811Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149EnvironmentalOpen in IMG/M
3300028872Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_204EnvironmentalOpen in IMG/M
3300028876Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140EnvironmentalOpen in IMG/M
3300028884Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195EnvironmentalOpen in IMG/M
3300028885Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185EnvironmentalOpen in IMG/M
3300031152Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 15_SEnvironmentalOpen in IMG/M
3300031170Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_SEnvironmentalOpen in IMG/M
3300031229Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38EnvironmentalOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300031852Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3Host-AssociatedOpen in IMG/M
3300031939Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2EnvironmentalOpen in IMG/M
3300032126Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2Host-AssociatedOpen in IMG/M
3300032174Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05EnvironmentalOpen in IMG/M
3300034131Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 7HMSEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI11643J12802_1210944623300000890SoilMNLLDRVTARLALVGADPHDDEDLRARKALLVLISVLILPVSAVWGALYLAFGSPVGVVPFVYFGILLGAIAVFSRTREFPWLLRVAQV
JGI10214J12806_1084896623300000891SoilMQLRHRIRAAADRVTAYLTLVGADPHDDEDLRARKALLVLISVLILPVAALWGALYLAFGSPVGVVPLVYFGILLGAIAVFSRTRDFAWL
JGI10216J12902_10021714963300000956SoilMSLTTRLAFIGADPHDDEDLRARKALLVLISVLILPISVLWGALYLAFGSPVGVVPLVYFGVLLGAIAVFSRTR
JGI10216J12902_12225329223300000956SoilMSLTARLAFIGADPHDDEDLRARKALLVLISVLILPISALWGALYLAFGSPVGIVPLVYFVALLGAIAVFSRTRDFPW
F14TB_10026433513300001431SoilMHLLDRMRAAADRVIARVMLVGADPHDDEDLRARKALLVLISVLILPVAALWGALYLAFGSPVGVVPLVYFGVLLGAIAVFSRTRDFPWLLRVGQIDILLA
F14TB_10036410013300001431SoilMNLLDRVTARLALVGADPHDDEDLRTRKALLVLISVLILPVSALWGALYLAFGSPVGVVPFVYFGILLGAIAVFSRTRDFPWLLRVAQVDILL
JGI24738J21930_1011743213300002075Corn RhizosphereMSNVSAMHTLGWTRASANRVTARLALLGADPHDDEDLRARKALLVLISVLILPVAALWGALYLSFGSPVGVVPLVYFGVLLGAIVVFSRTRNFERLLRVGQ
Ga0062589_10009862333300004156SoilMALSLKSYTDRVLARLRQIGADPQDDEDTRANKALLVLISVLILPVALLWATLYLAFGSPVGWVPLGYFATLLGAVVLFSRTGNFA
Ga0063356_10185578813300004463Arabidopsis Thaliana RhizosphereMHLLGRARAAADRLTARLALLGADPHDDEDMRARKALLVLISVLILPVAALWGALYLAFGSPVGVVPLVYFGILLGAIAVFSRTRDF
Ga0062595_10154636713300004479SoilMQLRHRIRAAADRVTAYLTLVGADPHDDEDLRARKALLVLISVLILPVAALWGALYLAFGSPVGVVPLVYFGVLLGAIAVFSRT
Ga0062595_10163692623300004479SoilMQLLGRVTSRLALVGADPGDDEDLRARKALLVLISVLILPVAVVWGALYLAFGSPVGLVPLVYFVVLLA
Ga0062595_10228037823300004479SoilVRERVLAYLAGIGADPQDDEDTRAAKALLVLISVLILPVSLLWAGLYLAFGSPVGWVPLAYFVVLLASIV
Ga0062591_10213775723300004643SoilLSLKSFSDRVLARLALIGADPHDDEDTRANKALLVLISILILPVALLWAILYLSFGSPVGWVPLGYFATLLGA
Ga0062594_10064506413300005093SoilMSLTTRLAFIGADPHDDEDLRARKALLVLISVLILPISVLWGALYLAFGSPVGVVPLVYFGVLLGAIAVFSRTRDFPWLLR
Ga0070676_1059637023300005328Miscanthus RhizosphereMHPLAWIRASANRVTARSALLGADPHDDEDLRARKALLVLISVLILPVAALWGALYLSFGSPVGVVPLVYFGVLLGAIVVFSRTRNFERLLRVGQADI
Ga0070683_10116670713300005329Corn RhizosphereVALTARLARIGADPQDDIETRADKALLVLISVLILPVALTWSALYLLLDSPVGWVPLAYFVVLLTSIVVFSRTRD
Ga0070713_10127407913300005436Corn, Switchgrass And Miscanthus RhizosphereVVPASNVPTVQLAERLRLIGADPEDDEDLRARKALLVLISVLILPVAGLWAALYLAFGSPVGWAPVAYFAVLAGSIAVFSRTRNFLW
Ga0070713_10134392313300005436Corn, Switchgrass And Miscanthus RhizosphereMQLVARLKLVGADPHDDEDLRARKALLVLISVLILPVAAVWGALYLSFGSPVGFVPLVYFAVLLGGIAVFSRTR
Ga0070678_10172193323300005456Miscanthus RhizosphereMPSLARLALVGADPHDDEDLRARKALLVLISVLILPVAALWGALYLAFGSPVGVVPIVYFGVLLAAIGVFSRTRDFDWLLRVGQVD
Ga0070695_10142975213300005545Corn, Switchgrass And Miscanthus RhizosphereMQLLGRVTSRLALVGADPGDDEDLRARKALLVLISVLILPVAVVWGALYLAFGSPVGLVPLVYFVVLLAGILMFARTR
Ga0066670_1069165623300005560SoilVLAYLANIGADPHDDEDTRAGKALLVLISVLILPVALLWATLYLAFGSPVGWVPLAYFAVLLLSIVVFSRTGNFG
Ga0068859_10051400313300005617Switchgrass RhizosphereVARLALIGADPHDDEDTRASKALLVLISVLILPVSLLWAALYLAFGSPVGWVPLGYFVVLLAAIVVFSR
Ga0068870_1043077233300005840Miscanthus RhizosphereVRPIPSLRERLVARLALIGADPHDDEDTRASKALLVLISVLILPVSLLWAALYLAFGSPVGWVPLGYFVVLLAAIVVFSRTRNFDQFLYVGQV
Ga0081538_1015279413300005981Tabebuia Heterophylla RhizosphereMHLLDRIRAAANRVTARLTLVGVDPHDDEDLRARKALLVLISVLILPVAALWGALYLAFGSPVGVVPLVYFGVLFGAIVVFARTRDFPS
Ga0081538_1039254113300005981Tabebuia Heterophylla RhizosphereMHLLDRIRAAADRATARLTLVGVDPHDDEDLRARKALLVLISVLILPVAALWGALYLAFGSPVGVVPLLYFGVLFGSIVVFARTRDFPQLLL
Ga0066652_10178599413300006046SoilMVVNVANRGLARLALIGADPQDDDDTRANKALLVLISVLILPVSFLWAALYLAFGSPVGWVPLGYFAVLLTSIVVF
Ga0075432_1036423013300006058Populus RhizosphereMQLLGRVTSRLALVGADPGDDEDLRARKALLVLISVLILPVAVVWGALYLAFGSPVGLVPLVYFVVLLAGILMFARTRDFPRLLLVG
Ga0070715_1008364413300006163Corn, Switchgrass And Miscanthus RhizosphereVARLALIGADPHDDEDTRASKALLVLISVLILPVSLLWAALYLAFGSPVGWVPLGYFVVLLGAIVVFSRTRNFDQFLYVGQVAILF
Ga0075431_10071826913300006847Populus RhizosphereMGPTRATADRVTARLVLVGADPHDDDDMRARKALLVLISALILPVAALWGALYLAFGSPVGVVPLVYFGILLGAIAVFSRTRDFPW
Ga0075431_10103850023300006847Populus RhizosphereMQSLDRITARLALVGADPHDNEDLRAHKALLVLISVLILPVSALWGALYLAFGSPVGVVPLVYFAVLLGAIVVFSRT
Ga0075424_10091164523300006904Populus RhizosphereMQSLDRITARLALVGADPHDNEDLRAHKALLVLISVLILPVSALWGALYLAFGSPVGVVPLVYFAVLLGAIVVFSR
Ga0075424_10271748023300006904Populus RhizosphereMQLLDRITARLALVGADPHDNEDLRAHKALLVLISVLILPVSALWGALYLAFGSPVGVVPLVYFAVLLGAIVVFSR
Ga0079219_1109668413300006954Agricultural SoilMNPLLARLAEVGADPADDEDLRGRKLLLVAVTVLVLAVALVWGALYLAFGSPIGIVPFVYFGILAAALATFARTRDLGFLLRVNQLDIV
Ga0075435_10087487413300007076Populus RhizosphereMHLQDLTERLAHVGADPSDDEDLRARKALLVLISVLILPVSALWGALYLAFGSPVGIVPLVYFGILLGAIAVFS
Ga0105240_1055051813300009093Corn RhizosphereMRAIERLKQIGADPADDEDLRARKALLVLISVLILPVAALWAALYLSFGSPVGWAPVAYFGVLAGSVA
Ga0105245_1188716513300009098Miscanthus RhizosphereMQLLGRVTSRLALVGADPGDDEDLRARKALLVLISVLILPVAVVWGALYLAFGSPVGVVPLVYFGVLLGAIAVFARTRDFPWLLR
Ga0075418_1013966243300009100Populus RhizosphereMQLLDRITARLALVGADPHDNEDLRAHKALLVLISVLILPVSALWGALYLAFGSPVGVVPLVYFAVLLGAIVVFSRTRDFP
Ga0066709_10378333613300009137Grasslands SoilVLAYLAQIGADPQDDEDTRAGKALLVLISALILPVALLWAALYLAFGSPVGWVPLGYFAVLLAGIVVFSRTRNFGQ
Ga0105092_1043883313300009157Freshwater SedimentMHLLHRIRAAATRVNARLALVGADPQDDEDLRARKALLVLISVLILPVAALWGALYLAFGSPVGVVPLLYFGILLGAIAVFSRTRDFPWLLR
Ga0126307_1014902333300009789Serpentine SoilVSRVSRIRSIVDRALAHLARIGADQQDDDDTRADKALLVLISVLILPVALLWATLYLAFGSPVGWVPLAYFAVLLASIVVFAPTR
Ga0126313_1128122413300009840Serpentine SoilMHLLNRVRAAADRVTARLTLVGADPHDDEDLRARKALLVMISVLILPVAALWGALYLAFGSPVGVVPLVYFGILLGAIAVFSRTRDFPWL
Ga0126315_1106753913300010038Serpentine SoilMHLLNRIRAAADRVAARLALVGADPHDDDDLRARKALLVLISVLILPVAALWGALYLAFGSPVGVVPLVYFGILLGAIAVFSRTRDFPWLLRVGQVDI
Ga0126310_1145220813300010044Serpentine SoilMNGTRLTTVANGIVERLARVGADPSDDETTRSSKALLVLISVLILPIAFLWGVLYLAFGSPVGVVPFVYFAILAGAIVVFSRTHDASALLRVNLLDI
Ga0126311_1023128613300010045Serpentine SoilMHVLDRIRAASDRATARLTLVGVDPHDDEDLRARKVLLVQISVLILPVAASWGALYLAFGSPVGVVPLVYFGVLFGAIVVFARTRDFPWL
Ga0126382_1136839713300010047Tropical Forest SoilMDRTTAIRDAGDRLLARLALIGADPQDDDDTRSAKALLVLISVLILPVALIWSILYLSFGSSVGWVPLGYFATLLAAIV
Ga0126306_1144485123300010166Serpentine SoilMGRLSPIRNLCEPVLARLGQLGADPEDDEDIRASKALLVLISVLILPVALLWGVLYLLFGSPVGWVPLGYFAILLASIV
Ga0134128_1100416113300010373Terrestrial SoilMQLVERLRLIGTDPEDDEDLRARKALLVLISVLILPVAALWAALYLSFGSPVGWAPVAYFAVLAGSIAVFSRTRNFLWLLRVGQVAI
Ga0134124_1150681823300010397Terrestrial SoilMGLFSPLRTKLDRVTARLALVGADPHDDEDLRARKALLVLISVLILPIAGLWGGLYLAFRSPVGVVPLVYLAVLLAA
Ga0134121_1172034813300010401Terrestrial SoilMRELADRALARLALVGADPLDDEDMRARKALLVLISVLILPISVIWGAVYIVFTPAGVIAFTYFVFLLGAIAVF
Ga0138514_10003648313300011003SoilVIAYLATVGANPHDDEDTRAGKALLVLISVLILPVALLWAAFYLAFGSPVGWVPLAYFAVLLLSIVVF
Ga0105246_1201834213300011119Miscanthus RhizosphereMGLFSPLRTKLDRVTARLALVGADPHDDEDLRARKALLVLISVLILPIAGLWGGLYLAFRSPVGVVPLVYLAVLLAAIIVFSRTGDFARLLRVNQVDI
Ga0137374_1080631023300012204Vadose Zone SoilMHLLGRIRAAADRVTARLTHVGADPHDDEDLRARKALLVLISALILPVAALWGALYLAFGSPVGVVPLVYFVVLLGAIAVFSRTRDFPWLLRVGQVDI
Ga0157285_1003462223300012897SoilMQLLDRITARLALVGADPHDNEDLRTHKALLVLISVLILPVSALWGALYLAFGSPVGVVPLVYFAVLLGAIVVFS
Ga0157293_1000354913300012898SoilMQLLDRITARLALVGADPHDNEDLRTHKALLVLISVLILPVSALWGALYLAFGSPVGVVPLVYFAVLLGAIVVFSRTRDFPRFL
Ga0157291_1007693613300012902SoilMQLLDRITARLALVGADPHDNEDLRTHKALLVLISVLILPVSALWGALYLAFGSPVGVVPLVYFAVLLGAIVVFSRTRDF
Ga0162653_10001631113300012937SoilMHPLGWIGASANRVTARLALLGADPHDDEDLRARKALLVLISVLILPVAALWGALYLAFGSPVGVVPLVYFGVLLGAIVVFSR
Ga0162650_10009226423300012939SoilMHVLDRIRAAVDHVIARLTLVGADPHDDEELHARKALLVLISVLILPVAALWGALYLAFGSPVGVVPLVYFGILLGAIAVFSRTRDF
Ga0164306_1133165913300012988SoilMQLVARLKLVGADPHDDEDLRARKALLVLISVLILPVAAVWGALYLSFGSPVGFVPLVYFAVLLGGIAVFSRTRDF
Ga0157307_104874213300013096SoilMGLFSPLRTRLDRVTARLALVGADPHDDEDLRARKALLVLISVLILPIAGLWGGLYLAFRSPVGVVPLVYLAVLL
Ga0157371_1010277113300013102Corn RhizosphereMQLVERLRLIGADPEDDEDLRARKALLVLISVLILPVAGLWAAFYLLFRSPVGWAPVAYFCVLAGAIVVFSRTRNFLWL
Ga0157372_1218869423300013307Corn RhizosphereMSNVSAMHPLGWTRASANRVTARLALLGADPHDDEDLRARKALLVLITVLILPVAALWGALYLSFGSPVGVVPLVYFGV
Ga0134078_1033081123300014157Grasslands SoilMHLTRRIRATADRVTARLVLVGADPHDDEDMRARKALLVLISVLILPVAALWGALYLALGSPVGVVPLVYFGVLLGAIAVFSRTRDFPRLLLVSQIAILLA
Ga0182008_1053967913300014497RhizosphereVTERLLAKLALIGADPHDDEDTRANKALLVLISVLILPVSLIWSGLYLAFGSPVGWVPLGYAAVLLTSIVVFSRTRDFGMFLLVGQVAILLAP
Ga0173483_1049170723300015077SoilMQLLGRVTSRLALVGADPGDDEDLRARKALLVLISVLILPVSVVWGALYLAFGSPVGVVPLVYFVVLLAGILMFARTRDFPRLLLVGQVDIL
Ga0132256_10221245223300015372Arabidopsis RhizosphereMQLLPRLALVGSDPGDDEDLRARKALLVLTSVLILPVAALWGALYLALGSPVGVVPIVYFGVLLGAIVVFSRT
Ga0132257_10183083523300015373Arabidopsis RhizosphereMRAMDDLTARLALVGADPLDDEDLRARKALLVLISVLILPVAALWGALYLAWGSPIGVVPFVYFGVLL
Ga0132255_10528770523300015374Arabidopsis RhizosphereMHFRDRMRAAADRITARLTLVGADPHDDEDMRARKALLVLISVLILPISALWGVLYLALGSPVGVVPLVYFGILLGAIAVFSRTHDFPRLLRVGQVDILLA
Ga0184605_1014488213300018027Groundwater SedimentMHRLDRIPASADRVTARLALVGADPHDDEDLRARKALLILISVLILPVAALWGALYLAFGSPVGVVPLVYFGILL
Ga0184620_1000117373300018051Groundwater SedimentVNEVSPIPSVRERLVARLALIGADPHDDEDTRASKALLVLISVLILPVSLLWAALYLAFGSPVGWVPLGYFVVLLASIVVFSRTRNFDQFL
Ga0184619_1043332113300018061Groundwater SedimentMRLAFAATVGNQNTVPCSPAARRVTSPAMHLVDRIRAAVDRVTARVALVGADPQDDEDLRARKALLVLISVLILPVAALWGALYLAFGSPVGVVPLVYFGVLFTAIA
Ga0184611_124093223300018067Groundwater SedimentMHPLAWIRASANRVTARLALLGADPHDDEDLRARKALLVLISVLILPVAALWGALYLSFGSPVGVVPLVYFGILIGAIAVFSRTRDFPWLLRV
Ga0184618_1011234113300018071Groundwater SedimentMHLLDRIRAAADRVTARLTLVGADPQDDEDLRARKALLILISVLILPVAALWGALYLAFGSPVGVVPLVYFGILLGAIAVFSRTRDFPWLLRVG
Ga0184635_1012311813300018072Groundwater SedimentVVHVLDRTRAAADRVAARLALIGADPSDDEDLRARKALLVLISVLILPVAAVWGALYLALGSPVGVVPLVYFGVLLGALAVFSRTHDFPWLLRVSQ
Ga0184632_1013453123300018075Groundwater SedimentMHPLDRIRAAADRVTARLTLVGADPHDDEDLRARKALLVLISVLILPVAALWGALYLAFGSPVGVVPLVYFGILLGAIAVFSRTRTSRGCSGWARSTSCSRRRCR
Ga0190265_1005682813300018422SoilMHLLDRIRAAVDRAAARVSVVGADPHDDDDLRARKALLVLISVLILPVAALWGVLYLALGSPVGVVPLVYFAVLAGAVALFS
Ga0190268_1001541033300018466SoilMHLLGRMRAAGDRVTARLTLVGADPHDDDDLRARKALLVLISVLILPVAAVWGALYLAFGSPVGVVPLVYFGVLLGAIAVFSRTRDFP
Ga0190274_1089391023300018476SoilMSGVSGIRRVGDRVLARLARIGTDPQDDDDTRASKALLVLISVLILPIALLWAGLYLAFGSPVGWVPLAYFAILLA
Ga0184643_138920113300019255Groundwater SedimentMSGVSRIRSIVDRVLAYLAQIGADPQDDDDTRAGKALLVLISVLILPVALLWAALYLAFGSPVGWVPLAYFVVLLASIV
Ga0184642_156896813300019279Groundwater SedimentMHLLDRIRAAADRVTARLTLVGADPQDDEDLRARKALLVLISVLILPVAALWGTLYLAFGSPVGVVPLVYFGILLGAIAVFSRTRDFPWLL
Ga0193701_104746013300019875SoilVNEVSQIPSVRERLVARLALIGADPHDDEDTGASKALLVLISVLILPVSLLWAALYLAFGSPVGWVPLGYFVVLLASIVV
Ga0193725_105171213300019883SoilVNEVSPSPSVRERLVARLALIGADPHDDEDTRASKALLVLISVLILPVSLLWATLYLAFGSPVGWVPLGYFVVLLGAIV
Ga0210381_1004008133300021078Groundwater SedimentVNEVSPIPSVRERLVARLALIGADPHDDEDTRASKALLVLISMLILPVSLLWAALYLAFGSPVGWVPLGYFVVLLASIVVFSRT
Ga0210381_1005587513300021078Groundwater SedimentVNEVSQIPSVRERLVARLALIGADPHDDEDTGASKALLVLISVLILPVSLLWAALYLAFGSPVGWVPLGYFVVLLASIVVFSRTRNF
Ga0182009_1018182033300021445SoilMHLMGRTRATADRVTARLVLVGADPHDDEDMRARKALLVLISVLILPVAALWGALYLALGSPVGVVPLVYFGVLVGAIAVF
Ga0247752_101041833300023071SoilMGLFSPLRTRLDRVTARLALVGADPHDDEDLRARKALLVLISVLILPIAGLWGGLYLAFRSPVGVVPLVYLAVLLAAIIVFSRTG
Ga0207647_1081564513300025904Corn RhizosphereMSLTTRLAFIGADPHDDEDLRARKALLVLISVLILPISVLWGALYLAFGSPVGVVPLVYFGVLLGAIAVFSRTRDFPWLLRVSQVA
Ga0207679_1106859123300025945Corn RhizosphereMHVLDRIRATAERLSARLALVGADPHDDEDLRARKALLVLISVLILPVAALWGALYLAFGSPVGVVPLVYFGVLLGAILVR
Ga0207640_1215949013300025981Corn RhizosphereMSNVSAMHPLGWTRASANRVTARLALLGADPHDDEDLRARKALLVLISVLILPVEELWGALYLSFGSPVGVVPLVYFGVLLGAILVF
Ga0209470_103133143300026324SoilMRLLDRTRAVVDRLVAFLALVGADPHDDEDLRARKALLVLISVLILPVAALWGGLYLAFGSPVGVVPLVYFGILLGAIAVFSPSCSRRRCR
Ga0207428_1061770213300027907Populus RhizosphereMHLLDRARAAADRLTARLALLGADPHDDEDMRARKALLVLISVLILPVAALWGALYLAFGSPVGVVPLVYFGILLGAI
Ga0307291_113940823300028707SoilMSGVSRIRSVVDRVLAYLAQIGADPQDDDDTRAGKALLVLISVLILPVALLWAALYLAFGSPVGWVPLAYFAVLLASIVVFSRT
Ga0307295_1002903333300028708SoilVNEVSQIPSVRERLVARLALIGADPHDDEDTGASKALLVLISVLILPVSLLWAALYLAFGSPVGWVPLGYFVVLLASIVVFS
Ga0307295_1012831413300028708SoilMHAYLAGIGADPQDDEDTRAGKALLVLISVLILPIALLWAALYLAFGSPVGWVPLGYFAVLLASVVAFSRTRNFGQLLLVGQVA
Ga0307293_1013001713300028711SoilVSQIPSVRERLVARLALIGADPHDDEDTGASKALLVLISVLILPVSLLWAALYLAFGSPVGWVPLGYFVVLLASIVVFS
Ga0307285_1015026713300028712SoilMSTVSGVSGVSRIRSVGDRVLARLALIGADPQDDEDTRAGKALLVLISVLILPVSLLWATLYLAFGSPVGWVPLAYFATL
Ga0307303_1001391533300028713SoilVNEVSQIPSVRERLVARLALIGADPHDDEDTGASKALLVLISVLILPVSLLWAALYLAFGSPVGWVPLGYFVVLLASIVVFSRTRNFDQF
Ga0307311_1000992233300028716SoilVNEVSQIPSVRERLVARLALIGADPHDDEDTGASKALLVLISVLILPVSLLWAALYLAVGSPVGWVPLGYFVVLLASI
Ga0307301_1004904423300028719SoilVHLLNRIRAAGDRVTARLALVGADPYDDDDLRARKALLVMISVLILPVAALWGALYLAFGSPVGVVPLVYFGILLGAIAVFSRTRDFPW
Ga0307316_1012427213300028755SoilMSTVSGVSGVSRIRSVGDRVLARLALIGADPQDDEDTRSGKALLVLISVLILPVSLLWATLYLAFGSPVGWVPLAYFATLLAALVVFSRTRDFGRFLI
Ga0307280_1013373523300028768SoilMNLVARMRAAADRAATRVTLIGADPHDDEDLRARKALLVLISVLILPVAALWGALYLAFGSPVGVVPLVYFGVLLGAIVMFSRTGDFP
Ga0307280_1039976223300028768SoilMHLVDWIKAAASRLTARLALVGADPHDDEDLRARKALLVLISVLILPVAALWGALYLAFGSPVGVVPLVYFGILLGA
Ga0307320_1024775313300028771SoilVPTALPVTSSAVHLLNRIRAAADRVTARLALVGADPYDDDDLRARKALLVMISVLILPVAALWGALYLAFGSPVGVVPLVYFGILLGAIAVFS
Ga0307320_1027249113300028771SoilMHLLDRIRAAADRVTARLTLVGADPQDDEDLRARKALLVLISVLILPVAALWGTLYLAFGSPVGVVPLVYFGILLGAIAVFSRTRDFPWLLRVGQLD
Ga0307288_1020726913300028778SoilMSTVSGVSGASRIRSVGDRVLAHLALIGADPQDDEDTRAGKALLVLISVLILPVSLLWATLYLAFGSPVGWVPLAYFATLL
Ga0307323_1004691013300028787SoilVNEVSPIPSVRERLVARLALIGADPHDDEDTRASKALLVLISVLILPVSLLWAALYLAFGSPVGWVPLGYFVVLLASIVVFSRTR
Ga0307283_1019147913300028790SoilVNEVSQIPSVRERLVARLALIGADPHDDEDTRASKALLVLISVLILPVSLLWATLYLAFGSPVGWVPLAYFATLLAALVVFSRTR
Ga0307290_1015258013300028791SoilMHLLDRIRAAADRVTARLTLVGADPQDDEDLRARKALLVLISVLILPVAALWGTLYLAFGSPVGVVPLVYFGILLGAIAVFSRTRDFPWLLRVGQ
Ga0307287_1004979913300028796SoilVSGLKGLSDRVLAFLAQIGADPQDDDDTRAGKALLVLISVLILPVALLWAILYLSFGSPVGWVPLVYFATLLAAIV
Ga0307292_1022496613300028811SoilMHLLGRMRAAADRVTARLTLVGADPHDDDDLRARKALLVLISVLILPVAAVWGALYLAFGSPVGVVPLVYFGVLLGAIAVFSRTRDFPWLLRVGQIDILLW
Ga0307314_1006248433300028872SoilMHAYLAGIGADPQDDEDTRAGKALLVLISVLILPIALLWAALYLAFGSPVGWVPLGYFAVLLASVVAFS
Ga0307314_1024115623300028872SoilMHFLDRIRAAADRITARLALVGADPHDDEDLGARKALLVLISVLILPVAALWGTLYLAFGSPVGVVPLVYFGILLGAIAVF
Ga0307286_1040631513300028876SoilMQLVNRTGAAVDRFTARLARVGADPHDDEDLRARKALLVQISVLILPVAALWGALYLAFGSPVGLVPLVYFGVLLGAIVV
Ga0307308_1042458523300028884SoilMHLLDRIRAAADRVTARLTLVGADPQDDEDLRARKALLVLISVLILPVAALWGTLYLAFGSPVGVVPLVYFGILLGAIAVFSRTRDFPWL
Ga0307304_1031045213300028885SoilMSGVSRIRSVFDRVLAYLAQIGADPQDDDDTRAGKALLVLISVLILPVALLWAALYLAFGSPVGWVPLAYFTVLLA
Ga0307501_1005339333300031152SoilVSRLLAYLGRIGADPHDDEDTRADKALLVLISVLILPVALLWATLYLAFGSPVGWVPLAYFAVLLASIVV
Ga0307498_1011821613300031170SoilVNEVGPIPSVRERLVAWLALIGADPHDDEDTRASKALLVLISVLILPVSLLWAALYLAFGSPVGWVPLGYFVVLLASIVVFSRTRNFDQ
Ga0299913_1023498213300031229SoilMHLLDGIRAAMDRVTTRLARVGADSRDDEDMRARKALLVLISVLILPVAALWGALYLAFGSPVGVVPLVYIGVLFGAIAVFSRTR
Ga0307473_1098983523300031820Hardwood Forest SoilVSSVLAYLAGIGADPQDDEDTRAGKALLVLISVLILPVALLWATFYLAFGSPVGWVPLGYFTVLLAAIVVFSRTRNFGR
Ga0307410_1197641813300031852RhizosphereMRQIARQPWDRVTARLALVGVDPHDDEDLRARKALLVLISVLILPVAALWGALYLGFGSPVGVVPLVYFGVLLGAILVFSRT
Ga0308174_1042694223300031939SoilMRPLGRIGAAAERATARLTLVGADPHDDEELAARKALLVLISALILPVAALWGALYLALGSPVGVVPLVYFGVLLCA
Ga0307415_10038727623300032126RhizosphereMHLLDRIRAAADRLALVGADPHDDEDLRARKALLVLISALILPVAALWGALYLAFGSPVGVVPLVYFGVLLGAMAVFSRTRDFPWLLRVGQLGILL
Ga0307470_1051051023300032174Hardwood Forest SoilMQLLDRITARLALVGADPHDNEDLRAHKALLVLISVLILPVSALWGALYLAFGSPVGVVPLVYFAVLLGAIVVFSRTRDFPRF
Ga0334911_036889_440_6943300034131Sub-Biocrust SoilMHLLDRIRAAAARVTARLTLVGADRHDDEDLRARKALLVLISVLILPVAALWGALYLAFGSPVGVVPLVYFGVLFSAIVVFARTR

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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