NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F070601

Metagenome Family F070601

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F070601
Family Type Metagenome
Number of Sequences 123
Average Sequence Length 80 residues
Representative Sequence MRLATNPIVLRMALVFVAAGFAFIVGMLMMRRMRRSLSEEGSFPDTPSAPESFPLHTYHAVIQQLKQQKHELQ
Number of Associated Samples 111
Number of Associated Scaffolds 123

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 93.04 %
% of genes near scaffold ends (potentially truncated) 93.50 %
% of genes from short scaffolds (< 2000 bps) 91.06 %
Associated GOLD sequencing projects 103
AlphaFold2 3D model prediction Yes
3D model pTM-score0.40

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (93.496 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(17.073 % of family members)
Environment Ontology (ENVO) Unclassified
(38.211 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(47.967 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 53.47%    β-sheet: 0.00%    Coil/Unstructured: 46.53%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.40
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 123 Family Scaffolds
PF01478Peptidase_A24 61.79
PF06750DiS_P_DiS 21.14
PF01041DegT_DnrJ_EryC1 1.63
PF01875Memo 0.81
PF00230MIP 0.81

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 123 Family Scaffolds
COG1989Prepilin signal peptidase PulO (type II secretory pathway) or related peptidaseCell motility [N] 63.41
COG0399dTDP-4-amino-4,6-dideoxygalactose transaminaseCell wall/membrane/envelope biogenesis [M] 1.63
COG0436Aspartate/methionine/tyrosine aminotransferaseAmino acid transport and metabolism [E] 1.63
COG0520Selenocysteine lyase/Cysteine desulfuraseAmino acid transport and metabolism [E] 1.63
COG0626Cystathionine beta-lyase/cystathionine gamma-synthaseAmino acid transport and metabolism [E] 1.63
COG1104Cysteine desulfurase/Cysteine sulfinate desulfinase IscS or related enzyme, NifS familyAmino acid transport and metabolism [E] 1.63
COG2873O-acetylhomoserine/O-acetylserine sulfhydrylase, pyridoxal phosphate-dependentAmino acid transport and metabolism [E] 1.63
COG0580Glycerol uptake facilitator or related aquaporin (Major Intrinsic protein Family)Carbohydrate transport and metabolism [G] 0.81
COG1355Predicted class III extradiol dioxygenase, MEMO1 familyGeneral function prediction only [R] 0.81

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms93.50 %
UnclassifiedrootN/A6.50 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300002245|JGIcombinedJ26739_100469922All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_2_55_51135Open in IMG/M
3300004152|Ga0062386_100217798All Organisms → cellular organisms → Bacteria1505Open in IMG/M
3300004152|Ga0062386_101585681All Organisms → cellular organisms → Bacteria546Open in IMG/M
3300004643|Ga0062591_102144351All Organisms → cellular organisms → Bacteria580Open in IMG/M
3300005181|Ga0066678_10770885All Organisms → cellular organisms → Bacteria638Open in IMG/M
3300005187|Ga0066675_11025007All Organisms → cellular organisms → Bacteria619Open in IMG/M
3300005353|Ga0070669_100442787All Organisms → cellular organisms → Bacteria1070Open in IMG/M
3300005354|Ga0070675_101527705All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_2_55_5616Open in IMG/M
3300005439|Ga0070711_101502095All Organisms → cellular organisms → Bacteria588Open in IMG/M
3300005440|Ga0070705_100588132All Organisms → cellular organisms → Bacteria859Open in IMG/M
3300005445|Ga0070708_101346884All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter666Open in IMG/M
3300005446|Ga0066686_10817219All Organisms → cellular organisms → Bacteria619Open in IMG/M
3300005454|Ga0066687_10974566All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_2_55_5506Open in IMG/M
3300005459|Ga0068867_101829263All Organisms → cellular organisms → Bacteria571Open in IMG/M
3300005468|Ga0070707_100577634All Organisms → cellular organisms → Bacteria1086Open in IMG/M
3300005518|Ga0070699_101583873All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_2_55_5600Open in IMG/M
3300005536|Ga0070697_101564377All Organisms → cellular organisms → Bacteria589Open in IMG/M
3300005557|Ga0066704_10500745All Organisms → cellular organisms → Bacteria800Open in IMG/M
3300005561|Ga0066699_10111932All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1817Open in IMG/M
3300005576|Ga0066708_10055981All Organisms → cellular organisms → Bacteria → Acidobacteria2222Open in IMG/M
3300005576|Ga0066708_10952069All Organisms → cellular organisms → Bacteria534Open in IMG/M
3300005578|Ga0068854_100216139All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_2_55_51514Open in IMG/M
3300005718|Ga0068866_10584517All Organisms → cellular organisms → Bacteria751Open in IMG/M
3300005718|Ga0068866_11041792All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_2_55_5583Open in IMG/M
3300005841|Ga0068863_100140641All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae2307Open in IMG/M
3300006028|Ga0070717_10892796All Organisms → cellular organisms → Bacteria809Open in IMG/M
3300006031|Ga0066651_10585162All Organisms → cellular organisms → Bacteria593Open in IMG/M
3300006041|Ga0075023_100531337All Organisms → cellular organisms → Bacteria535Open in IMG/M
3300006050|Ga0075028_100718408All Organisms → cellular organisms → Bacteria603Open in IMG/M
3300006052|Ga0075029_100084746All Organisms → cellular organisms → Bacteria1882Open in IMG/M
3300006163|Ga0070715_10540235All Organisms → cellular organisms → Bacteria674Open in IMG/M
3300006173|Ga0070716_101448783All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_2_55_5560Open in IMG/M
3300006173|Ga0070716_101834255All Organisms → cellular organisms → Bacteria503Open in IMG/M
3300006176|Ga0070765_102061741All Organisms → cellular organisms → Bacteria → Proteobacteria533Open in IMG/M
3300006354|Ga0075021_10455168All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_2_55_5807Open in IMG/M
3300006354|Ga0075021_11023997All Organisms → cellular organisms → Bacteria539Open in IMG/M
3300006755|Ga0079222_10600599All Organisms → cellular organisms → Bacteria840Open in IMG/M
3300006904|Ga0075424_100730877All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_2_55_51057Open in IMG/M
3300007258|Ga0099793_10555560All Organisms → cellular organisms → Bacteria573Open in IMG/M
3300009038|Ga0099829_10709291All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_2_55_5836Open in IMG/M
3300009090|Ga0099827_11014160All Organisms → cellular organisms → Bacteria720Open in IMG/M
3300009092|Ga0105250_10145849All Organisms → cellular organisms → Bacteria983Open in IMG/M
3300009101|Ga0105247_11233683All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_2_55_5597Open in IMG/M
3300009551|Ga0105238_10992484All Organisms → cellular organisms → Bacteria860Open in IMG/M
3300011119|Ga0105246_10657291All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_2_55_5913Open in IMG/M
3300011269|Ga0137392_10918461All Organisms → cellular organisms → Bacteria720Open in IMG/M
3300011271|Ga0137393_10107164All Organisms → cellular organisms → Bacteria → Acidobacteria2290Open in IMG/M
3300012189|Ga0137388_11278790All Organisms → cellular organisms → Bacteria672Open in IMG/M
3300012203|Ga0137399_10257796All Organisms → cellular organisms → Bacteria1431Open in IMG/M
3300012205|Ga0137362_11257530All Organisms → cellular organisms → Bacteria625Open in IMG/M
3300012206|Ga0137380_11229515All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium634Open in IMG/M
3300012207|Ga0137381_10391909All Organisms → cellular organisms → Bacteria1211Open in IMG/M
3300012208|Ga0137376_11141557All Organisms → cellular organisms → Bacteria666Open in IMG/M
3300012212|Ga0150985_118233834All Organisms → cellular organisms → Bacteria509Open in IMG/M
3300012361|Ga0137360_10856633All Organisms → cellular organisms → Bacteria783Open in IMG/M
3300012361|Ga0137360_10894866All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_2_55_5765Open in IMG/M
3300012363|Ga0137390_11800152All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_2_55_5544Open in IMG/M
3300012896|Ga0157303_10044144All Organisms → cellular organisms → Bacteria885Open in IMG/M
3300012930|Ga0137407_11112378All Organisms → cellular organisms → Bacteria749Open in IMG/M
3300012944|Ga0137410_10126668All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1922Open in IMG/M
3300012976|Ga0134076_10641829All Organisms → cellular organisms → Bacteria500Open in IMG/M
3300012984|Ga0164309_11730143All Organisms → cellular organisms → Bacteria536Open in IMG/M
3300012987|Ga0164307_10482194All Organisms → cellular organisms → Bacteria933Open in IMG/M
3300014502|Ga0182021_11160136All Organisms → cellular organisms → Bacteria931Open in IMG/M
3300014969|Ga0157376_10567730All Organisms → cellular organisms → Bacteria1125Open in IMG/M
3300018064|Ga0187773_10624788All Organisms → cellular organisms → Bacteria662Open in IMG/M
3300018064|Ga0187773_10645505All Organisms → cellular organisms → Bacteria653Open in IMG/M
3300019887|Ga0193729_1197825All Organisms → cellular organisms → Bacteria688Open in IMG/M
3300020004|Ga0193755_1160249All Organisms → cellular organisms → Bacteria676Open in IMG/M
3300020579|Ga0210407_11105488All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_2_55_5601Open in IMG/M
3300020580|Ga0210403_11153420All Organisms → cellular organisms → Bacteria599Open in IMG/M
3300020583|Ga0210401_10734757All Organisms → cellular organisms → Bacteria847Open in IMG/M
3300021168|Ga0210406_11018542All Organisms → cellular organisms → Bacteria615Open in IMG/M
3300021178|Ga0210408_11034551All Organisms → cellular organisms → Bacteria634Open in IMG/M
3300021432|Ga0210384_11088024All Organisms → cellular organisms → Bacteria702Open in IMG/M
3300021432|Ga0210384_11903357All Organisms → cellular organisms → Bacteria501Open in IMG/M
3300021559|Ga0210409_10963006All Organisms → cellular organisms → Bacteria727Open in IMG/M
3300025320|Ga0209171_10226335All Organisms → cellular organisms → Bacteria1038Open in IMG/M
3300025885|Ga0207653_10459827All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_2_55_5500Open in IMG/M
3300025906|Ga0207699_10220722All Organisms → cellular organisms → Bacteria → Acidobacteria1294Open in IMG/M
3300025913|Ga0207695_10974455All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_2_55_5728Open in IMG/M
3300025916|Ga0207663_10676537All Organisms → cellular organisms → Bacteria816Open in IMG/M
3300025920|Ga0207649_10218500All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_2_55_51356Open in IMG/M
3300025923|Ga0207681_11478252All Organisms → cellular organisms → Bacteria570Open in IMG/M
3300025927|Ga0207687_10196693All Organisms → cellular organisms → Bacteria1573Open in IMG/M
3300025927|Ga0207687_11184532All Organisms → cellular organisms → Bacteria657Open in IMG/M
3300025931|Ga0207644_11192937All Organisms → cellular organisms → Bacteria640Open in IMG/M
3300026023|Ga0207677_10483567All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_2_55_51067Open in IMG/M
3300026035|Ga0207703_11203142All Organisms → cellular organisms → Bacteria728Open in IMG/M
3300026078|Ga0207702_11702983All Organisms → cellular organisms → Bacteria623Open in IMG/M
3300026088|Ga0207641_10650490All Organisms → cellular organisms → Bacteria1035Open in IMG/M
3300026291|Ga0209890_10209178All Organisms → cellular organisms → Bacteria622Open in IMG/M
3300026532|Ga0209160_1184149All Organisms → cellular organisms → Bacteria859Open in IMG/M
3300026542|Ga0209805_1057414All Organisms → cellular organisms → Bacteria → Acidobacteria1922Open in IMG/M
3300027583|Ga0209527_1025589All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1315Open in IMG/M
3300027655|Ga0209388_1233928All Organisms → cellular organisms → Bacteria502Open in IMG/M
3300027882|Ga0209590_10667194All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_2_55_5666Open in IMG/M
3300027894|Ga0209068_10143317All Organisms → cellular organisms → Bacteria1288Open in IMG/M
3300027894|Ga0209068_10905980All Organisms → cellular organisms → Bacteria522Open in IMG/M
3300027903|Ga0209488_10511350All Organisms → cellular organisms → Bacteria879Open in IMG/M
3300027911|Ga0209698_10842369All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_2_55_5691Open in IMG/M
3300028381|Ga0268264_10444719All Organisms → cellular organisms → Bacteria1255Open in IMG/M
3300028792|Ga0307504_10151952All Organisms → cellular organisms → Bacteria787Open in IMG/M
3300031057|Ga0170834_113882191All Organisms → cellular organisms → Bacteria639Open in IMG/M
3300031128|Ga0170823_13340591All Organisms → cellular organisms → Bacteria588Open in IMG/M
3300031469|Ga0170819_14112953All Organisms → cellular organisms → Bacteria505Open in IMG/M
3300031474|Ga0170818_113267202All Organisms → cellular organisms → Bacteria791Open in IMG/M
3300031718|Ga0307474_10865882All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_2_55_5715Open in IMG/M
3300031726|Ga0302321_101397896All Organisms → cellular organisms → Bacteria805Open in IMG/M
3300031740|Ga0307468_100433648All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_2_55_51017Open in IMG/M
3300031820|Ga0307473_11358483All Organisms → cellular organisms → Bacteria534Open in IMG/M
3300032174|Ga0307470_11494614All Organisms → cellular organisms → Bacteria561Open in IMG/M
3300032205|Ga0307472_101869169All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_2_55_5598Open in IMG/M
3300032893|Ga0335069_10645392All Organisms → cellular organisms → Bacteria1209Open in IMG/M
3300033158|Ga0335077_11338580All Organisms → cellular organisms → Bacteria693Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil17.07%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil13.01%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere10.57%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds6.50%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil6.50%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil4.88%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil4.06%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil3.25%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere3.25%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere3.25%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere2.44%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere2.44%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil1.63%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil1.63%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland1.63%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil1.63%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere1.63%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.63%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.63%
Iron-Sulfur Acid SpringEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring0.81%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil0.81%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.81%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.81%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil0.81%
FenEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Fen0.81%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Soil0.81%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil0.81%
FenEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Fen0.81%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere0.81%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere0.81%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.81%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere0.81%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere0.81%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300002245Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)EnvironmentalOpen in IMG/M
3300004152Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3EnvironmentalOpen in IMG/M
3300004643Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3EnvironmentalOpen in IMG/M
3300005181Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127EnvironmentalOpen in IMG/M
3300005187Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124EnvironmentalOpen in IMG/M
3300005353Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaGHost-AssociatedOpen in IMG/M
3300005354Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaGHost-AssociatedOpen in IMG/M
3300005439Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaGEnvironmentalOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005446Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135EnvironmentalOpen in IMG/M
3300005447Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138EnvironmentalOpen in IMG/M
3300005454Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136EnvironmentalOpen in IMG/M
3300005459Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2Host-AssociatedOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005518Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaGEnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005557Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153EnvironmentalOpen in IMG/M
3300005561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148EnvironmentalOpen in IMG/M
3300005576Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157EnvironmentalOpen in IMG/M
3300005578Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2Host-AssociatedOpen in IMG/M
3300005718Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2Host-AssociatedOpen in IMG/M
3300005841Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2Host-AssociatedOpen in IMG/M
3300006028Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaGEnvironmentalOpen in IMG/M
3300006031Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100EnvironmentalOpen in IMG/M
3300006041Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014EnvironmentalOpen in IMG/M
3300006050Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014EnvironmentalOpen in IMG/M
3300006052Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013EnvironmentalOpen in IMG/M
3300006163Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaGEnvironmentalOpen in IMG/M
3300006173Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaGEnvironmentalOpen in IMG/M
3300006176Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5EnvironmentalOpen in IMG/M
3300006354Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012EnvironmentalOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006796Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114EnvironmentalOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300007258Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3EnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009092Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaGHost-AssociatedOpen in IMG/M
3300009101Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaGHost-AssociatedOpen in IMG/M
3300009551Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaGHost-AssociatedOpen in IMG/M
3300011119Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaGHost-AssociatedOpen in IMG/M
3300011269Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaGEnvironmentalOpen in IMG/M
3300011271Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaGEnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012199Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012206Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012207Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012363Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaGEnvironmentalOpen in IMG/M
3300012896Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S118-311C-2EnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012976Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaGEnvironmentalOpen in IMG/M
3300012984Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MGEnvironmentalOpen in IMG/M
3300012987Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MGEnvironmentalOpen in IMG/M
3300014502Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300018064Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MGEnvironmentalOpen in IMG/M
3300019887Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2EnvironmentalOpen in IMG/M
3300020004Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2EnvironmentalOpen in IMG/M
3300020579Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-MEnvironmentalOpen in IMG/M
3300020580Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-MEnvironmentalOpen in IMG/M
3300020583Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-MEnvironmentalOpen in IMG/M
3300021168Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-MEnvironmentalOpen in IMG/M
3300021178Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-MEnvironmentalOpen in IMG/M
3300021432Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-MEnvironmentalOpen in IMG/M
3300021559Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-MEnvironmentalOpen in IMG/M
3300025320Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025885Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025906Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025913Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025916Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025920Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025923Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025927Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025931Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026023Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026035Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026078Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026088Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026291Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049 (SPAdes)EnvironmentalOpen in IMG/M
3300026334Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)EnvironmentalOpen in IMG/M
3300026342Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 (SPAdes)EnvironmentalOpen in IMG/M
3300026532Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)EnvironmentalOpen in IMG/M
3300026542Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)EnvironmentalOpen in IMG/M
3300027583Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027655Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)EnvironmentalOpen in IMG/M
3300027882Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027894Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)EnvironmentalOpen in IMG/M
3300027903Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)EnvironmentalOpen in IMG/M
3300027911Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)EnvironmentalOpen in IMG/M
3300028381Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028792Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_SEnvironmentalOpen in IMG/M
3300031057Oak Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031128Oak Summer Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031469Fir Spring Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031474Fir Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031718Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05EnvironmentalOpen in IMG/M
3300031726Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_1EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300032174Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300032893Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1EnvironmentalOpen in IMG/M
3300033158Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGIcombinedJ26739_10046992223300002245Forest SoilVRLATNPIVLRMVLVLVTAGLAFIVGLLLMRRMRRSISEEGSFPDTPSSVSASESFPLHMYHAVIQQLKQQKHELQSLQLVERRRAKTSENISAAVLS
Ga0062386_10021779833300004152Bog Forest SoilMKLLANPLVLRMVLVLFATAAAFCLGVVILRRMRRSLTTEASFAAPAQSPDNLPLDTYHAVIQQLKQQKHQLQSE
Ga0062386_10158568113300004152Bog Forest SoilMRLATNPIVLRMVLVFVAAGFAFMMGQLLMRRMRRSISQEGSLPEASSAPESFPLHTYHAVIQQLKQQKHELQSLQLVER
Ga0062591_10214435123300004643SoilVKLLTNPIVLRMALVFVAGSFAFVVGLLLMKRMRRSISDEASFSDASASSASESFPLHTYHAVIQQLKQQKHEL
Ga0066678_1077088513300005181SoilMKILANPIVLRMGLGLLAAIFAFVMGITMMRRMRRSLIEEASLAEGPSTPERFPLHTYHAVIQQLKQQKHELLSEQQIE
Ga0066675_1102500723300005187SoilMKILGNPIVLRMGLGLLAAIFAFVMGMMMMRRMRRSLIEEASLDQGPSTPERFPLHTYHAVIQQ
Ga0070669_10044278723300005353Switchgrass RhizosphereVKLLTNPIVLRMALVFVAGSFAFVVGLLLMKRMRRSISDEGSFSDASASSASESFPLHTYHAVIQQLKQQKHEL
Ga0070675_10152770523300005354Miscanthus RhizosphereVKLLTNPIVLRMALVFVAGSFAFVVGLLLMKRMRRSISDEASFSDASTSSVSESFPLHTYHAVIQQLKQQKHELQSLQVAERRRARTSENISAAVLANL
Ga0070711_10150209513300005439Corn, Switchgrass And Miscanthus RhizosphereVRLATNPIVLRMALVFVAAGFAFIVGMLVMRRMRRSLSEEGSFPDTPSAPESFPLHTYH
Ga0070705_10058813213300005440Corn, Switchgrass And Miscanthus RhizosphereVKLLTNPIVLRMALVFVAGSFAFVVGLLLMKRMRRSISDEASFSDASTSSVSESFPLHTYHAVIQQLKQQKHELQSLQVVERRRAK
Ga0070708_10134688413300005445Corn, Switchgrass And Miscanthus RhizosphereLRLLTNPIVLRMALALFAGGFAFVMFRIMIRRMRHSFASEAAPPNDSPSAVSFPLHTYHAVIQQLKQQKHELLSMQQAERRRAKTSENISAAILSNLSCGVMFFAPNGLVRQANA
Ga0066686_1081721913300005446SoilMKILGNPIVLRMGFGLLAAIFAFVMGMMMMRRMRRSLIEEASLDQGPSTPERFPLHTYHA
Ga0066689_1049644313300005447SoilMKLLTNPIFLRMAAVFFTAVFAFVVALLVMRRLRKGLIDEDFSLDTPRESDNLPLHTYHAVIQQLKQQKHELQSLQQSERRRAKTSESISAAVL
Ga0066687_1097456613300005454SoilMRILGNPIMLRMGLGLLAAIFAFVMGMLMMRRMRRSLMEESSLAEGPSTPEHFPLHTYHAVIQQLKQQKHELLSEQQIERRRAKASENIS
Ga0068867_10182926313300005459Miscanthus RhizosphereVKLLTNPIVLRMALVFVAGSFAFVVGLLLMKRMRRSISDEGSFSDASASSASESFPLHTYHAVIQQLKQQK
Ga0070707_10057763413300005468Corn, Switchgrass And Miscanthus RhizosphereVRLLSNPIILRMALVFVAAGFAFVMGLLLIRHMRRGITEEASFADAPVAPESFPLHTYHAVIQQLKQQKHELLSSQREERRR
Ga0070699_10158387313300005518Corn, Switchgrass And Miscanthus RhizosphereVKMIANPLAFRMALVLVAGALAFFMGMIMMRKLRRSLTEDVSFTDSPPTPEGFPLHTYHAVIQQLKQQKHELQSLQAVERRRAKTSENISAAV
Ga0070697_10156437723300005536Corn, Switchgrass And Miscanthus RhizosphereLRLLTNPIVLRMALALFAGSFAFVMFRIMIRRMRHSFASEAAPPNDSPSAVSFPLHTYHAVIQQLKQQKHELLSM
Ga0066704_1050074513300005557SoilMKILGNPIVLRMGLGLLAAIFAFVMGMMMMRRMRRSLIEEASLDQGPSTPERFPLHTYHAVIQQLKQQKHELLSEQQIER
Ga0066699_1011193233300005561SoilMKILSNPIALRMALGLVAAIFAFVMGLLMMRRMRRSLMEEASLTEDPPTPERFPLHTYHAVIQQLKQQKHELQSEQQIER
Ga0066708_1005598143300005576SoilMLRMVVVFLAAGFAFVIGLQLIRRMRRSITEETAFFDAPSAPQSFPLHTYHAVIQQLKQQKHELQSLQL
Ga0066708_1095206923300005576SoilMKILSNPIALRMAFGLVAAIFAFMMGLLMMRRMRRSLMEEASLAEDPPTLERFPLHTYHAVIQQLKQQKHE
Ga0066708_1103515813300005576SoilMKLLTNPIFLRMAAVFFTAVFAFVVALLVMRRLRKGLIDEDFSLDTPRESESLPLHTYHAVIQQLKQQKHELQSLQQSERRRAKTSESISAAVLSNLPCGVVFFT
Ga0068854_10021613913300005578Corn RhizosphereVKLLTNPIVLRMALVFVAGSFAFVVGLLLMKRMRRSISDEGSFSDASASSASESFPLHTYHAVIQQLKQQKHELQSLQVAERRRARTSENISA
Ga0068866_1058451723300005718Miscanthus RhizosphereVKLLTNPIVLRMALVFVAGSFAFVVGLLLMKRMRRSISDEASFSDASTSSVSESFPLHTYHAVI
Ga0068866_1104179223300005718Miscanthus RhizosphereVRLATNPIVLRMALVFVAAGFAFIVGMLVMRRMRRSLSEEGSFPDTPSAPESFPLHTYHAVIQQLKQQKHELQSLQLLERRRAKTSENVSAAVLSHLSSGVLF
Ga0068863_10014064133300005841Switchgrass RhizosphereMRLATNPIVLRMALVFVAAGFAFIVGMLMMRRMRRSLSEEGSFPDTPSAPESFPLHTYHAVIQQLKQ
Ga0070717_1089279623300006028Corn, Switchgrass And Miscanthus RhizosphereMTNPIVLRMVLVLCAGAFAFMLGLLVMRRMRRSLAEAGAPLDHPSWPESFPLHTYHAVIQQLKQQK
Ga0066651_1058516223300006031SoilMKILSNPIALRMAFGLVAAIFAFVMGLLMMRRMRRSLMEEASLAEDPPTLERFPLHTYHAVIQQLKQQKHELQSEQQIERRRAK
Ga0075023_10053133713300006041WatershedsMRLATNPIVLRMALVFVAAGFAFVMGMLMMRRMRRSIGEEASFANTSPVPESFPLHMY
Ga0075028_10071840823300006050WatershedsVRLATNPIVLRTVLVFVTAGFAFIVGLLLMRRMRRSISEEGSFSDTPSSASASESFPLHM
Ga0075029_10008474633300006052WatershedsVRLATNPIVLRMVLVFAAAGFAFIVGLLLIRRMRRSFSEEGSFSETPSVSESFPLHTYHAVIQQLKQQKHELQSLRLVERR
Ga0070715_1054023513300006163Corn, Switchgrass And Miscanthus RhizosphereVRLATNPIVLRMVLVLVTAGFAFLVGLLLMRRMRRSISEEGSFSDTPSSVSASESFPLHM
Ga0070716_10144878313300006173Corn, Switchgrass And Miscanthus RhizosphereLRLLTNPIVLRMALALFAGGFAFVMFRIMIRRMRHSFASEAATPSDSPSAVSFPLHTYHAVIQQLKQQKHELLSMQQAERRRAKTSENISAAILSNLSCGVMFFAPN
Ga0070716_10183425523300006173Corn, Switchgrass And Miscanthus RhizosphereVRLATNPIVLRMVLVLVTAGLAFIVGLLLMRRMRRSISEEGSFSDTPSSVSASESFPLHMYHAVIQQLKQQKHELQSLQ
Ga0070765_10206174113300006176SoilMRLVTNPIVLHMLLVFVSAGFAFVVGQFLMRRLRRSFSEAGSFADAASASESFPLHTYHAVIQQLKQQKYELQNLQLLERRRAKASENISAAVLSHLSSGVLFFTPNGLVRQANSSAKQILGFASPAGMS
Ga0075021_1045516823300006354WatershedsVKLLTHPIVIRMAIVLIAATFAFLMGILLMKRVRRSVQEESSLGEGDPKTGAFPLHTYSAVIQQLKQQKHELQSVQQAERRRAKTTENVSGAV
Ga0075021_1102399723300006354WatershedsMRLATNPIVLRMALVFVAAGFAFVMGLLMMRRMRRSISEEASFANTPSVPESFPLHMYHAVIQQLKQQKHEL
Ga0079222_1060059913300006755Agricultural SoilVKLLTNPIVLRMALVFVAGSFAFVVGLLLMKRMRRSISDEASFSDASTSSVSESFPLHTYHAVIQQLKQQKHELQSLQ
Ga0066665_1137929923300006796SoilMKLLTNPIFLRMAAVFFTAVFAFVVALLVMRRLRKGLIDEDFSLDTPRESDNLPLHTYHAVIQQLKQQKHELQSLQQSERRRAKTSESISAAVLS
Ga0075424_10073087723300006904Populus RhizosphereVKLLTNPIVLRMALVFVAGSFAFVVGLLLMKRMRRSISDEASFSDASTSSVSESFPLHTYHAVIQQLKQQKHELQSLQVVERRRAKTSENISAAVLSN
Ga0099793_1055556023300007258Vadose Zone SoilVRLATNPIVLRMALVLVTAGFAFIVGLLLMRRMRRSISEEGSFSDTPSSVSASESFPLHMYHAVIQQLKQQKHELQSLQLVERRRAKTSE
Ga0066710_10403352623300009012Grasslands SoilMKLLTNPIFLRMAAVFFTAVFAFVVALLVMRRLRKGLIDEDFSLDTPRESDNLPLHTYHAVIQQLKQQKHELQSLQQSERRR
Ga0099829_1070929113300009038Vadose Zone SoilMLRMALVFVAAGFAFVVGLLLMKRMRRSITEEASFPDAPSAPESFPLHTYHAVIQQLKQQKHELQSSQREERRRAKTSENISAAVLSNL
Ga0099827_1101416013300009090Vadose Zone SoilVKLLTNPIVLRMALVLMGAVFAFVGSTLMLRRVRRSFTEDESFPNSPPSPESFPLHTYHAVIQQLKQQKHELQSLQQVERRRAKTSE
Ga0105250_1014584913300009092Switchgrass RhizosphereVKLLTNPIVLRMALVFVAGSFAFVVGLLLMKRMRRSISDEGSFSDASASSASESFPLHTYHAVI
Ga0105247_1123368313300009101Switchgrass RhizosphereMRLATNPIVLRMALVFVAAGFAFIVGMLMMRRMRRSLSEEGSFPDTPSAPESFPLHTYHAVIQQLKQQKHELQSLQLLERRRAKTSENVSAA
Ga0105238_1099248413300009551Corn RhizosphereVKLLTNPIVLRMALVFVAGSFAFVVGLLLMKRMRRSISDEASFSDASTSSVSESFPLHTYHAVIQQLKQQKHELQSLQVAERRRART
Ga0105246_1065729123300011119Miscanthus RhizosphereMALVFVAAGFAFIVGMLVMRRMRRSLSEEGSFPDTPSAPESFPLHTYHAVIQQLKQQKHELQSLQLLERRRAKTSENVSAAVLSHLSSGVLFFTPNGLVRQAN
Ga0137392_1091846113300011269Vadose Zone SoilMVLVLVTAGLAFIVGLLLMRRMRRSISEEGSFSDTPSSVSASESFPLHMYHAVIQQLKQQKHELQS
Ga0137393_1010716443300011271Vadose Zone SoilMVLVFVAAGFAFIVGLLLMRRMRRSFSDEGSFSDTPSSVSGSESFPLHTYHAVIQQLKQQKHELQSLQLV
Ga0137388_1127879023300012189Vadose Zone SoilVKLLTNPIVLRMVLVLFAAASAFVMGTLIMRRMRRSLTEEAPFADDPPSPESFALHTYHAVIQQLKQQKHELQSLQQAERRRA
Ga0137383_1010543013300012199Vadose Zone SoilMKLLTNPIFLRMAAVFFTAVFAFVVALLVMRRLRKGLIDEDFSLDTPRESDSLPLHTYHAVIQQLKQQKHELQSLQQSERRRAKTSESISAAVLSNLPCGVV
Ga0137383_1036076913300012199Vadose Zone SoilMKLLTNPIFLRMAAVFFTAVFAFVVALLVMRRLRKGLIDEDFSLDTPRESESLPLHTYHAVIQQLKQQKHELQSLQQSERRRAKTSESISAAVLSNLPCGVV
Ga0137399_1025779613300012203Vadose Zone SoilMKILSNPIALRMALGLVAAIFAFVMGLLMMRRMRRSLMEEASLAEDPPTLERFPLHTYHAVIQQLKQQKHEL
Ga0137362_1125753013300012205Vadose Zone SoilMKILSNPIALRMALGLVAAIFAFVMGLLMMRRMRRSLMEEASLTEDPPTPERFPLHTY
Ga0137380_1122951513300012206Vadose Zone SoilVKLLTNPLVLRMALVLFAAAVAFAMGMLIMRRMRRSFTEEASFADDPPSPESFPLHTYHAVIQQLKQQKHEL
Ga0137381_1039190923300012207Vadose Zone SoilMKILGNPIVLRMGLGLLAAIFAFVMGITMMRRMRRSLIEEASLAEGPSTPERFPLHTYHAVIQQLKQQKHELLSEQQI
Ga0137376_1114155713300012208Vadose Zone SoilMKILGNPIVLRMGLGLLAAIFAFVMGMLMMRRMRRSLMEEASVAEGPSTPERFPLHTYHAVIQ
Ga0150985_11823383423300012212Avena Fatua RhizosphereMALVFMAAGFAFIVGMLVMRRMRRSLIEESSFPDTPSAPESFPLHTYH
Ga0137360_1085663313300012361Vadose Zone SoilMRILGNPIMLRMGLGLLAAIFAFVMGLLMMRRMRRSLREEASLMEGPTTPERFPLHTYH
Ga0137360_1089486623300012361Vadose Zone SoilVRLASNPIVLRMAVMLVAAGFAFVMGLLLIRRMRRSITQEGSFPDAPVAAESFPLHTYHAVIQQLKQQKHELLSSQREERRRAKTSENISASVLANLSCGVLFFTHNG
Ga0137390_1180015223300012363Vadose Zone SoilVKLLTNPIVLRMALVLMGAVFAFVGSTLMLRRVRRSFTEDESFPNSPPSPESFPLHTYHAVIQQLKQQKHELQSLQQVERRRAKTSESISATVLSHLSCGVLFLTPNGLIRQANGSA
Ga0157303_1004414413300012896SoilVKLLTNPIVLRMALVFVAGSFAFVVGLLLMKRMRRSISDEASFSDASASSASESFPLHTY
Ga0137407_1111237813300012930Vadose Zone SoilMKILGNPIMLRMGLGLLAAIFAFVMGMLMMRRMRRSLMEEASLAEGASTPEHFPLHTYHAVIQQLKQQKHELLSEQQIERR
Ga0137410_1012666833300012944Vadose Zone SoilMKILSNPIALRMALGLVAAIFAFVMGLLMMRRMRRSLMEEASLTEDPPTPERFPLHTYHAVIQQLKQQKH
Ga0134076_1064182923300012976Grasslands SoilVKLLTNPIVLRMALVLFAAGFAFVMGTLIMRRMRRSLAEEASFMDEPRAPEGFLLHTYSAVIQQLKQQKHELQSVQQMERRRAKTSE
Ga0164309_1173014323300012984SoilVKLATNPVVLRMALVLVAAGFAFLLGLVLMRRMRRSLSEESSVADAPSAPESFPLHTYHA
Ga0164307_1048219413300012987SoilVKLLTNPIVLRMALVFVAGRFAFVVGLLLMKRMRRSISDEASFSDASTSSVSESFPLHTYHAVIQQL
Ga0182021_1116013623300014502FenMKLLTNPIVLRMAIGLIAACLAFLIGLVFMRRLRRSLVSETSGLERQTSAESFPLHTYHAVIQQLKQQKHELQSLQQMER
Ga0157376_1056773013300014969Miscanthus RhizosphereMALVFVTAGFAFIVGLLLMKRMRRSISEESSFSDTPSSVSVSESFPLHTYHAVIQQLKQQ
Ga0187773_1062478823300018064Tropical PeatlandVKLLANPIFLRMALVFIAGAFAFVLGTALIRRMRRSLLAEESIPPAGASSESLPLHTYHAVIQELKQQKHELESQQRLERRRSKTSENISAAVLSHLSSGVLFVDATCLV
Ga0187773_1064550523300018064Tropical PeatlandVRLLTNPIVLRMALVLVAAGCAFVIGLLMMRRMRRSLTEEASFADAPSAPESFPLHTYHAVIQQLKQQKHELQ
Ga0193729_119782513300019887SoilMRILGNPIMLRMGLGLLAAIFAFVMGMLMMRRMRRSLMEESSLAEGPSTPEHFPLHTYHAVIQQLKQQ
Ga0193755_116024923300020004SoilMKILSNPIALRMAFGLVAAIFAFVMGLLMMRRMRRSLMEEASLAEGPPTLERFPLHTYHAVIQQLKQQKHELQSEQQIER
Ga0210407_1110548823300020579SoilVRLLSNPIMLRMVLVFIAAGFAFVVGLLLMKRMRRSITEEASFADAPAASESFPLHTYHAVIQQLKQQKHELQSSQREERRRAKTSENISAAVLSN
Ga0210403_1115342023300020580SoilVSLSNPIVVRMAVVLVAAGFAFVVGLLLIRRMRRSITEEGSFPDAQVAAESFPLHMYHAVIQQLKQQKHELQSSQREERR
Ga0210401_1073475723300020583SoilMTNPIVLRMVLVLCAGGFAFMLGLLVTRRMRRSLAEAGAPLDHPSSPENFPLHTYHAVIQQLKQQKHELLSLQQVERRRAKTS
Ga0210406_1101854223300021168SoilMVVVFVAAGFAFIVGLLMMRRMRRIISEEGSFSETPSSRSVSESFPLHTYHAVIQQLKQQKHELQSLQLLERRRAKT
Ga0210408_1103455123300021178SoilVSLSNPIVVRMAVVLVAAGFAFVVGLLLIRRMRRSITEEGSFPDAQVAAESFPLHMYHAVIQQLKQQKHELQSSQREE
Ga0210384_1108802423300021432SoilVSLSNPIVVRMAVVLVAAGFAFVVGLLLIRRMRRSITEEGSFPDAQVAAESFPLHMYHAVIQQLKQQKHELQSSQREERRRAKTSENLSAAV
Ga0210384_1190335713300021432SoilVRLLGNPIMLRMVLVFIAAGFAFVVGLLLMKRMRRSITEEASFADAPAASESFRLHTYHAVIQQLKQQKHELQSSQREERRRAK
Ga0210409_1096300613300021559SoilMTNPIVLRMVLVLCAGGFAFMLGLLVTRRMRRSLAEAGAPLDHPSSPENFPLHTYHAVIQQLKQQKHELLSLQQVERRRAKTSE
Ga0209171_1022633513300025320Iron-Sulfur Acid SpringLGVALKLLANPIVLRMVLGAFAAGLAFLIGIIVIRRMRRRISEEASFTPDAASAEGFPLHTYHAVIQQLKQQKHELQSEQQ
Ga0207653_1045982713300025885Corn, Switchgrass And Miscanthus RhizosphereVKLLTNPIVLRMALVFVAGSFAFVVGLLLMKRMRRSISDEGSFSDASASSASESFPLHTYHAVIQQLKQQKHELQSLQVVERRRAAQHRRQGIHHPETARATAW
Ga0207699_1022072213300025906Corn, Switchgrass And Miscanthus RhizosphereVRLATNPIVLRMALVFVAAGFAFIVGMLVMRRMRRSLSEEGSFPDTPSAPESFPLHTYHAVIQQLKQQKHELQSLQLLERRRAKTSENVSAAVLSHLSSGVLFFTPNGLVRQA
Ga0207695_1097445523300025913Corn RhizosphereVRLATNPIVLRMALVFVAAGFAFIVGMLVMRRMRRSLSEEGSFPDTPSAPESFPLHTYHAVIQQLKQQKHELQSLQLLERRRAKTSENVSAAVLSHLSSGVLFF
Ga0207663_1067653723300025916Corn, Switchgrass And Miscanthus RhizosphereVRLLSNPIVVRMALVFVAAGFAFVMGLLLMRRMRRSITEEASFGDTTVAPESFPLHTYHAVIQQLKQQKHELLSS
Ga0207649_1021850023300025920Corn RhizosphereVKLLTNPIVLRMALVFVAGSFAFVVGLLLMKRMRRSISDEGSFSDASASSASESFPLHTYHAVIQQLKQQKHELQSLQVAERRRARTSENISAAV
Ga0207681_1147825213300025923Switchgrass RhizosphereVKLLTNPIVLRMALIFVAGSFAFVVGLLMIKRMRRSISDEASFSDASASSASESFPLHTYHAVIQQLKQQKHE
Ga0207687_1019669313300025927Miscanthus RhizosphereMRLATNPIVLRMALVFVAAGFAFIVGMLMMRRMRRSLSEEGSFPDTPSAPESFPLHTYHAVIQQLKQQKHELQ
Ga0207687_1118453213300025927Miscanthus RhizosphereVKLLTNPIVLRMALVFVAGSFAFVVGLLLMKRMRRSISDEASFSDASTSSVSESFPLHTYHAVIQQLKQQKHEL
Ga0207644_1119293713300025931Switchgrass RhizosphereVKLLTNPIVLRMALVFVAGSFAFVVGLLLMKRMRRSISDEASFSDASTSSVSESFPLHTYHAVIQQLKQQKHELQS
Ga0207677_1048356713300026023Miscanthus RhizosphereVKLLTNPIVLRMALVFVAGSFAFVVGLLLMKRMRRSISDEASFSDASTSSASESFPLHTYHAVIQQLKQQKHELQSLQVAERRRARTSENISAAV
Ga0207703_1120314213300026035Switchgrass RhizosphereVRLATNPIVLRMALVFVAAGFAFIVGMLVMRRMRRSLSEEGSFPDTPSAPESFPLHTYHAVIQQLKQQK
Ga0207702_1170298323300026078Corn RhizosphereVRLATNPIVLRMALVFVAAGFAFIVGMLVMRRMRRSLSEEGSFPDTPSAPESFPLHTYHAVIQQLK
Ga0207641_1065049023300026088Switchgrass RhizosphereMRLATNPIVLRMALVFVAAGFAFIVGMLMMRRMRRSLSEEGSFPDTPSAPESFPLHTYHAVIQQLKQQK
Ga0209890_1020917813300026291SoilMVLGVAVRLATNPIVLRMVLVFVAAGFAFIVGLLLIRSMRRSLSEESAFAAEPSVSESFPLHMYHAVI
Ga0209377_114135513300026334SoilMKLLTNPIFLRMAAVFFTAVFAFVVALLVMRRLRKGLIDEDFSLDTPRESESLPLHTYHAVIQQLKQQKHELQSLQQSERRRAKTSES
Ga0209057_118344423300026342SoilMKLLTNPIFLRMAAVFFTAVFAFVVALLVMRRLRKGLIDEDFSLDTPRESDSLPLHTYHAVIQQLKQQKHELQSLQQSERRRAKTSESISAAV
Ga0209160_118414913300026532SoilMKILGNPIVLRMGLGLLAAIFAFVMGMMMMRRMRRSLIEEASLDQGPSTPERFPLHTYHAVIQQLKQQKHELLSEQQIERRRA
Ga0209805_105741413300026542SoilMKILSNPIALRMALGLVAAIFAFVMGLLMMRRMRRSLMEEASLTEDPPTPERFPLHTYHAVIQQLKQQKHELQSEQQI
Ga0209527_102558933300027583Forest SoilVRLATNPIVLRMVMVFVAAGFAFIVGLLLMRRMRRSFSEEGSFSDTPSSVSASESFPLHTYHAVIQQLKQQKHELQSLQLVERRRA
Ga0209388_123392813300027655Vadose Zone SoilMKILSNPIALRMALGLVAAIFAFVMGLLMMRRMRRSLMEEASLTEDPPTPERFPLHTYHAVIQQLKQQ
Ga0209590_1066719423300027882Vadose Zone SoilVKLLTNPIVLRMALVLMGAVFAFVGSTLMLRRVRRSFTEDESFPNSPPSPESFPLHTYHAVIQQLKQQKHELQSLQQVERRRAKTSESISAT
Ga0209068_1014331723300027894WatershedsVRLATNPIVLRTVLVFVTAGFAFIVGLLLMRRMRRSISEEGSFSATPSSASASESFPLHM
Ga0209068_1090598023300027894WatershedsMRLATNPIVLRMALVFVAAGFAFVMGLLMMRRMRRSISEEASFANTPSVPESFPLHMYHAVIQQLKQQKHELQS
Ga0209488_1051135013300027903Vadose Zone SoilVRLATNPIVLRMVLVLVTAGLAFIVGLLLMRRMRRSISEEGSFSDTPSSVSASESFPLHMYHAVIQQLKQQKHELQSLQLVERRRAKTSENI
Ga0209698_1084236913300027911WatershedsVRALSNPIVLRMAVMFVAAGFAFVMGLLLMRRMRRSIADEASFPDTPVTAESFPLHTYHAVIQLLKQQKHELLSSQREERRRAKSSENISAA
Ga0268264_1044471913300028381Switchgrass RhizosphereMRLATNPIVLRMALVFVAAGFAFIVGMLMMRRMRRSLSEEGSFPDTPSAPESFPLHTYHAVIQQLKQQKHE
Ga0307504_1015195223300028792SoilVRLLSNPIMLRMALVFVVAGFAFVMGLLLMRRMRQSITEEASFADPPVAPERFPLHTYHAVIQQLKQQKHELLSSQREE
Ga0170834_11388219113300031057Forest SoilMTNPIVLRMVLVLCAGAFAFMLGLLVMRHMRRSLAEAGAPLDHPSTPESFPLHTH
Ga0170823_1334059113300031128Forest SoilMTNPIVLRMVLVLCAGAFAFMLGLLVMRRMRRSLAEAGAPLDHPSTPESFPLHTH
Ga0170819_1411295323300031469Forest SoilVRLATNPIVLRMLLVLVTAGLAFIVGLLLMRRMRRSISEEGSFSDTPSSVSASESFPLHM
Ga0170818_11326720223300031474Forest SoilVRLATNPIVLRMVLVLVTAGLAFIVGLLLMRRMRRSISEEGSFSDTPSSVSASESFPLHM
Ga0307474_1086588223300031718Hardwood Forest SoilMTNPIVLRMVLVLCAGGFAFMLGLLVTRRMRRSLAEAGAPLDHPSSPENFPLHTYHAVIQQLKQQKHELATEQRAERRRAKTSENISAAVLSRLPSGVMFFAANGL
Ga0302321_10139789623300031726FenMKLLTNPIVLRMAIGLIAACLAFLIGLVFMRRLRRSLVSETSGLERQTSAESFPLHTYHAVIQQLKQQKH
Ga0307468_10043364813300031740Hardwood Forest SoilVRLATNPILLRMALVFVTAGFAFIVGLLLIKRMRRSIGEESSFSNTPSSVSVSESFPLHTYHAVIQQLKQQKHELQSLQLLERRRAKTSENISAAVLSN
Ga0307473_1135848323300031820Hardwood Forest SoilMTNPIVLRMVLVLCAGAFAFMLGLLVMRRMRRSLAEAGAPLDHPFTPESFPLHTYHAVIQQLKQQKHELLSLQQVERRRAK
Ga0307470_1149461413300032174Hardwood Forest SoilMRILGNPIMLRMGLGLLAAIFAFVMGMLMMRRMRRSLMEEASLAEGPSRSEHFPLHTYHAVIQQLKQQKHELQSEQQI
Ga0307472_10186916923300032205Hardwood Forest SoilVKALTNPIMVRMALMLFAAGIAFVIGMLLMRRLRRSMVEDASFTGEAPSPESFPLHTYHAVIQQLKQQKHELLSLQQLERRRAKTSENIS
Ga0335069_1064539213300032893SoilVSAFANPLVLRMALAAFAAGFAFLMGLMIIRRMRRSLTEEASASNEVRPSSGGFALLTYNAVIQQLKQQKHELQSLQQAERRRAKTSENISAAVLSNL
Ga0335077_1133858023300033158SoilVRLVSNPIVWRMALTLLAAGFAFVMGLGLMRRMRRSISEEGVLTDERLPGEGLALHTYHAVIQQLKQQKHELLSLQQAERRR

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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